View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9461_low_152 (Length: 203)
Name: NF9461_low_152
Description: NF9461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9461_low_152 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 32377529 - 32377408
Alignment:
| Q |
82 |
cttagaatatggattattatcctattctacctctattgtggttaaaaaatatagggcacctttattggtttcaatgttgcaaccgagtatttcaatgata |
181 |
Q |
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| T |
32377529 |
cttagaatatggattattatcctattctacctctattgtggttaaaaaatatagggcacatttattggtttcaatgttgcaaccgagtatttcaatgata |
32377430 |
T |
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| Q |
182 |
tgttgtgagtgttgaaagtcca |
203 |
Q |
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| T |
32377429 |
tgttgtgagtgttgaaagtcca |
32377408 |
T |
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