View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9461_low_36 (Length: 386)

Name: NF9461_low_36
Description: NF9461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9461_low_36
NF9461_low_36
[»] chr8 (54 HSPs)
chr8 (2-246)||(17264388-17264630)
chr8 (1-247)||(22499344-22499589)
chr8 (1-244)||(23118880-23119122)
chr8 (13-246)||(17499747-17499980)
chr8 (10-246)||(24554623-24554859)
chr8 (1-246)||(33170141-33170385)
chr8 (1-246)||(23216547-23216789)
chr8 (5-244)||(18043195-18043433)
chr8 (8-249)||(20707675-20707915)
chr8 (1-246)||(25607789-25608033)
chr8 (8-206)||(45561752-45561952)
chr8 (57-247)||(22725530-22725719)
chr8 (49-249)||(19334098-19334296)
chr8 (36-244)||(11599965-11600173)
chr8 (42-246)||(22883680-22883881)
chr8 (15-246)||(24236922-24237151)
chr8 (15-246)||(11541895-11542128)
chr8 (36-234)||(16000085-16000280)
chr8 (1-217)||(7468220-7468433)
chr8 (74-246)||(18263516-18263687)
chr8 (8-246)||(15931213-15931451)
chr8 (36-152)||(22311040-22311156)
chr8 (8-246)||(24265885-24266122)
chr8 (62-246)||(37655744-37655929)
chr8 (96-198)||(24905885-24905987)
chr8 (8-246)||(26009321-26009558)
chr8 (3-145)||(23350163-23350306)
chr8 (39-246)||(29295769-29295974)
chr8 (158-247)||(21234223-21234312)
chr8 (121-246)||(27233352-27233477)
chr8 (8-246)||(5851390-5851627)
chr8 (83-192)||(22317445-22317554)
chr8 (174-236)||(23229502-23229564)
chr8 (50-119)||(21234093-21234161)
chr8 (183-247)||(18770355-18770419)
chr8 (174-246)||(24547040-24547112)
chr8 (25-132)||(33613038-33613144)
chr8 (181-246)||(18120615-18120680)
chr8 (177-246)||(21496547-21496616)
chr8 (177-246)||(21695472-21695541)
chr8 (214-246)||(23833156-23833188)
chr8 (183-247)||(39449039-39449103)
chr8 (213-248)||(17731784-17731819)
chr8 (102-149)||(18120540-18120587)
chr8 (176-246)||(6776787-6776857)
chr8 (176-238)||(20479477-20479539)
chr8 (176-246)||(22909894-22909964)
chr8 (176-246)||(41509851-41509921)
chr8 (177-246)||(22136619-22136688)
chr8 (36-77)||(22319695-22319736)
chr8 (213-246)||(22884337-22884370)
chr8 (174-246)||(22738183-22738255)
chr8 (174-238)||(28542730-28542794)
chr8 (174-246)||(38531451-38531523)
[»] chr3 (63 HSPs)
chr3 (1-249)||(15551935-15552183)
chr3 (1-246)||(43429577-43429821)
chr3 (36-246)||(8602195-8602405)
chr3 (1-192)||(6817672-6817863)
chr3 (1-246)||(17320617-17320860)
chr3 (1-247)||(5230651-5230897)
chr3 (36-246)||(22637222-22637429)
chr3 (36-246)||(12950459-12950670)
chr3 (1-246)||(17760843-17761084)
chr3 (1-246)||(19062163-19062404)
chr3 (41-246)||(37918959-37919163)
chr3 (1-246)||(21168743-21168988)
chr3 (1-244)||(41659507-41659750)
chr3 (96-246)||(14182523-14182673)
chr3 (15-246)||(17390892-17391126)
chr3 (36-246)||(8687761-8687968)
chr3 (36-246)||(9039630-9039837)
chr3 (8-247)||(18967966-18968204)
chr3 (17-246)||(6230712-6230942)
chr3 (36-146)||(10902469-10902579)
chr3 (76-247)||(31416331-31416500)
chr3 (41-246)||(40041635-40041844)
chr3 (95-246)||(55513830-55513981)
chr3 (17-238)||(4164298-4164520)
chr3 (94-238)||(15988427-15988571)
chr3 (31-246)||(11517518-11517734)
chr3 (15-151)||(25106389-25106524)
chr3 (1-244)||(14967728-14967970)
chr3 (8-207)||(33371411-33371608)
chr3 (167-246)||(38378373-38378452)
chr3 (8-246)||(34557759-34557995)
chr3 (174-246)||(12019814-12019886)
chr3 (17-203)||(4147746-4147935)
chr3 (3-119)||(14889902-14890019)
chr3 (175-246)||(38815672-38815743)
chr3 (177-246)||(25607602-25607670)
chr3 (36-128)||(20418776-20418868)
chr3 (169-248)||(11884432-11884511)
chr3 (175-246)||(14286896-14286967)
chr3 (167-246)||(14820029-14820108)
chr3 (179-246)||(23888374-23888441)
chr3 (109-246)||(25769107-25769245)
chr3 (177-246)||(11988401-11988470)
chr3 (177-246)||(39653731-39653800)
chr3 (174-246)||(13330743-13330815)
chr3 (174-246)||(18009324-18009396)
chr3 (112-246)||(12490973-12491107)
chr3 (169-248)||(20418658-20418737)
chr3 (107-239)||(14061399-14061532)
chr3 (185-247)||(24902105-24902167)
chr3 (177-246)||(14283159-14283228)
chr3 (169-246)||(15548398-15548475)
chr3 (184-248)||(11199783-11199847)
chr3 (176-246)||(51160689-51160760)
chr3 (176-246)||(16818611-16818681)
chr3 (184-238)||(51963488-51963542)
chr3 (177-246)||(35490628-35490697)
chr3 (177-246)||(54686061-54686130)
chr3 (174-246)||(15874084-15874156)
chr3 (176-236)||(30140557-30140617)
chr3 (174-246)||(30204269-30204341)
chr3 (174-246)||(47787093-47787165)
chr3 (174-246)||(48419533-48419605)
[»] chr7 (66 HSPs)
chr7 (1-246)||(17948065-17948309)
chr7 (1-246)||(9640942-9641186)
chr7 (36-246)||(39294226-39294436)
chr7 (6-242)||(12245586-12245822)
chr7 (1-246)||(9323097-9323341)
chr7 (3-248)||(3194060-3194305)
chr7 (41-246)||(18081378-18081581)
chr7 (8-246)||(31499135-31499375)
chr7 (52-246)||(21677588-21677779)
chr7 (1-246)||(4482158-4482402)
chr7 (36-152)||(17922970-17923086)
chr7 (2-246)||(15980553-15980795)
chr7 (8-246)||(14938598-14938836)
chr7 (8-246)||(15366191-15366429)
chr7 (50-246)||(28388355-28388548)
chr7 (63-246)||(16381803-16381984)
chr7 (8-246)||(48345478-48345714)
chr7 (36-246)||(9058691-9058903)
chr7 (3-248)||(14278946-14279188)
chr7 (40-246)||(4444176-4444385)
chr7 (36-152)||(17926807-17926923)
chr7 (49-243)||(20587706-20587900)
chr7 (8-246)||(34243188-34243423)
chr7 (22-246)||(4436775-4437001)
chr7 (49-246)||(18921154-18921337)
chr7 (88-246)||(28717935-28718093)
chr7 (8-246)||(9609134-9609371)
chr7 (8-246)||(9836706-9836943)
chr7 (1-127)||(12182238-12182366)
chr7 (167-246)||(14303049-14303128)
chr7 (36-246)||(16915539-16915752)
chr7 (10-87)||(33557949-33558026)
chr7 (8-246)||(5617346-5617583)
chr7 (182-246)||(12182130-12182194)
chr7 (83-246)||(33555565-33555728)
chr7 (169-246)||(18366222-18366299)
chr7 (98-152)||(13460352-13460406)
chr7 (25-134)||(16930024-16930133)
chr7 (25-134)||(16935407-16935516)
chr7 (177-246)||(15687451-15687519)
chr7 (181-246)||(19380852-19380917)
chr7 (43-134)||(4073069-4073159)
chr7 (177-248)||(25122068-25122139)
chr7 (177-247)||(47483161-47483231)
chr7 (177-246)||(10002718-10002787)
chr7 (177-246)||(13319153-13319222)
chr7 (36-152)||(15305426-15305542)
chr7 (177-246)||(15762806-15762875)
chr7 (169-246)||(16205941-16206018)
chr7 (182-246)||(3135056-3135120)
chr7 (174-246)||(13272799-13272871)
chr7 (174-246)||(15628538-15628610)
chr7 (175-246)||(12250299-12250370)
chr7 (174-245)||(15953819-15953890)
chr7 (176-247)||(16481170-16481241)
chr7 (212-246)||(17926734-17926768)
chr7 (177-246)||(3047631-3047700)
chr7 (176-248)||(7290471-7290544)
chr7 (181-246)||(15305335-15305400)
chr7 (213-246)||(16574757-16574790)
chr7 (213-246)||(16590872-16590905)
chr7 (213-246)||(49050121-49050154)
chr7 (174-238)||(12752754-12752818)
chr7 (178-238)||(16209586-16209646)
chr7 (41-77)||(16370421-16370457)
chr7 (174-246)||(17230319-17230391)
[»] chr4 (59 HSPs)
chr4 (1-246)||(13596059-13596303)
chr4 (1-246)||(47470372-47470618)
chr4 (15-246)||(19624085-19624317)
chr4 (1-244)||(41919288-41919529)
chr4 (1-247)||(50224195-50224441)
chr4 (36-246)||(5373190-5373399)
chr4 (1-248)||(19557221-19557465)
chr4 (41-246)||(12136362-12136567)
chr4 (45-247)||(14569295-14569497)
chr4 (1-246)||(10239480-10239724)
chr4 (115-247)||(12729296-12729428)
chr4 (49-248)||(13449102-13449298)
chr4 (15-246)||(17378244-17378473)
chr4 (63-246)||(5407062-5407243)
chr4 (1-100)||(15216280-15216379)
chr4 (101-246)||(54366187-54366332)
chr4 (11-246)||(18241235-18241471)
chr4 (2-233)||(19082979-19083211)
chr4 (8-246)||(41258428-41258663)
chr4 (75-247)||(42706674-42706847)
chr4 (103-246)||(24236830-24236974)
chr4 (25-246)||(18274701-18274923)
chr4 (48-119)||(12732212-12732283)
chr4 (177-246)||(31113600-31113668)
chr4 (180-246)||(12370654-12370720)
chr4 (177-249)||(14503753-14503825)
chr4 (169-248)||(14867267-14867346)
chr4 (174-247)||(15853494-15853567)
chr4 (2-62)||(24236980-24237041)
chr4 (181-246)||(33240218-33240282)
chr4 (182-246)||(12338883-12338947)
chr4 (175-246)||(22736351-22736422)
chr4 (25-134)||(7966659-7966768)
chr4 (170-248)||(17196229-17196307)
chr4 (168-246)||(19824678-19824756)
chr4 (176-246)||(34392952-34393022)
chr4 (184-246)||(38762670-38762732)
chr4 (174-247)||(7966813-7966886)
chr4 (174-247)||(15116513-15116586)
chr4 (177-246)||(15677172-15677240)
chr4 (36-247)||(34198241-34198452)
chr4 (174-246)||(18496687-18496759)
chr4 (174-246)||(27958942-27959014)
chr4 (174-242)||(41168127-41168195)
chr4 (174-246)||(55379113-55379185)
chr4 (176-246)||(109346-109417)
chr4 (174-248)||(12246447-12246521)
chr4 (212-246)||(15216409-15216443)
chr4 (88-134)||(17194573-17194619)
chr4 (176-246)||(18166440-18166510)
chr4 (181-246)||(17214058-17214123)
chr4 (177-246)||(18997939-18998008)
chr4 (177-246)||(19699977-19700046)
chr4 (177-246)||(19710562-19710631)
chr4 (177-246)||(32462780-32462849)
chr4 (213-246)||(43286655-43286688)
chr4 (176-236)||(13244213-13244273)
chr4 (174-238)||(13752509-13752573)
chr4 (176-248)||(37474298-37474370)
[»] chr1 (41 HSPs)
chr1 (13-247)||(21041681-21041915)
chr1 (1-246)||(40555265-40555509)
chr1 (1-246)||(41213698-41213941)
chr1 (1-237)||(5770235-5770470)
chr1 (47-246)||(78576-78775)
chr1 (1-217)||(33383841-33384056)
chr1 (8-246)||(5472439-5472680)
chr1 (8-246)||(50001991-50002229)
chr1 (17-247)||(46143667-46143898)
chr1 (17-246)||(29217047-29217275)
chr1 (247-368)||(30432337-30432458)
chr1 (40-248)||(20191651-20191845)
chr1 (25-204)||(9293461-9293641)
chr1 (36-246)||(21193051-21193261)
chr1 (49-246)||(18164101-18164294)
chr1 (83-246)||(12891447-12891609)
chr1 (1-94)||(40438370-40438463)
chr1 (115-246)||(25090964-25091095)
chr1 (8-248)||(52397548-52397787)
chr1 (36-249)||(37236029-37236244)
chr1 (2-118)||(20820455-20820572)
chr1 (36-246)||(22837680-22837893)
chr1 (40-91)||(25092904-25092955)
chr1 (36-246)||(20957103-20957312)
chr1 (82-246)||(22148521-22148683)
chr1 (36-246)||(17606816-17607027)
chr1 (169-247)||(21223611-21223689)
chr1 (156-237)||(40438509-40438590)
chr1 (174-246)||(19601083-19601155)
chr1 (170-246)||(20820354-20820430)
chr1 (174-246)||(27672677-27672749)
chr1 (174-246)||(36358518-36358590)
chr1 (174-238)||(35524702-35524766)
chr1 (175-246)||(38035768-38035839)
chr1 (181-247)||(16243628-16243694)
chr1 (177-246)||(15863884-15863953)
chr1 (218-246)||(9294601-9294629)
chr1 (182-246)||(17021447-17021511)
chr1 (183-246)||(21652258-21652322)
chr1 (174-238)||(21716017-21716081)
chr1 (174-246)||(51658589-51658661)
[»] chr6 (43 HSPs)
chr6 (13-246)||(22595711-22595944)
chr6 (1-246)||(29162954-29163199)
chr6 (11-246)||(15006679-15006913)
chr6 (1-246)||(34964822-34965066)
chr6 (3-247)||(17858408-17858652)
chr6 (1-150)||(22468147-22468296)
chr6 (8-246)||(12311051-12311287)
chr6 (6-247)||(16131146-16131386)
chr6 (49-246)||(19670426-19670621)
chr6 (51-244)||(23218873-23219065)
chr6 (36-246)||(16373877-16374088)
chr6 (8-246)||(29603465-29603702)
chr6 (98-246)||(17375846-17375995)
chr6 (103-246)||(19852190-19852333)
chr6 (49-246)||(31469602-31469795)
chr6 (82-246)||(17085669-17085832)
chr6 (94-246)||(21929332-21929484)
chr6 (12-246)||(22846013-22846244)
chr6 (8-246)||(25649145-25649379)
chr6 (1-74)||(19852327-19852400)
chr6 (174-246)||(14150468-14150540)
chr6 (167-246)||(6092419-6092498)
chr6 (174-247)||(941243-941316)
chr6 (177-247)||(15081067-15081137)
chr6 (169-246)||(23025044-23025120)
chr6 (169-246)||(25782565-25782642)
chr6 (177-246)||(29531750-29531819)
chr6 (8-248)||(33540279-33540517)
chr6 (178-246)||(22364450-22364518)
chr6 (174-246)||(25917579-25917651)
chr6 (2-56)||(15295531-15295586)
chr6 (169-248)||(25369646-25369725)
chr6 (177-247)||(7830125-7830195)
chr6 (177-246)||(1553500-1553569)
chr6 (181-238)||(4230522-4230579)
chr6 (62-246)||(21621017-21621203)
chr6 (177-238)||(35011697-35011758)
chr6 (181-233)||(4174893-4174945)
chr6 (174-247)||(16890016-16890092)
chr6 (177-246)||(32278852-32278921)
chr6 (183-246)||(16646116-16646180)
chr6 (212-248)||(22468324-22468360)
chr6 (183-246)||(23161997-23162061)
[»] chr2 (40 HSPs)
chr2 (1-246)||(6092343-6092586)
chr2 (1-246)||(24271938-24272183)
chr2 (8-246)||(30995029-30995264)
chr2 (39-246)||(43640240-43640446)
chr2 (36-149)||(18533345-18533458)
chr2 (42-134)||(19643889-19643981)
chr2 (1-100)||(25132254-25132353)
chr2 (69-246)||(24839315-24839493)
chr2 (8-246)||(19647975-19648211)
chr2 (25-247)||(19435982-19436204)
chr2 (3-249)||(20270817-20271066)
chr2 (41-95)||(25593213-25593267)
chr2 (169-246)||(24381661-24381738)
chr2 (74-236)||(22137922-22138084)
chr2 (8-246)||(32738356-32738593)
chr2 (167-244)||(19643763-19643840)
chr2 (169-246)||(20021763-20021840)
chr2 (112-246)||(23823645-23823779)
chr2 (112-246)||(23825589-23825723)
chr2 (177-246)||(25255560-25255629)
chr2 (177-246)||(32463805-32463874)
chr2 (181-246)||(34875919-34875984)
chr2 (174-246)||(19655404-19655476)
chr2 (174-246)||(25303476-25303548)
chr2 (167-246)||(25593128-25593207)
chr2 (36-94)||(24296642-24296700)
chr2 (177-246)||(17202435-17202504)
chr2 (181-246)||(23781587-23781652)
chr2 (177-246)||(24343612-24343680)
chr2 (174-246)||(9783077-9783149)
chr2 (174-246)||(22787714-22787786)
chr2 (176-248)||(24833284-24833356)
chr2 (174-246)||(28969774-28969846)
chr2 (177-248)||(28033305-28033376)
chr2 (114-246)||(5417-5549)
chr2 (177-246)||(42180773-42180842)
chr2 (213-246)||(45620690-45620723)
chr2 (174-246)||(7319295-7319367)
chr2 (183-246)||(20012979-20013043)
chr2 (98-126)||(45620576-45620604)
[»] chr5 (47 HSPs)
chr5 (8-246)||(23236455-23236692)
chr5 (36-249)||(14345743-14345955)
chr5 (1-247)||(19871803-19872047)
chr5 (36-181)||(20456636-20456780)
chr5 (42-246)||(16837814-16838017)
chr5 (1-248)||(3420870-3421117)
chr5 (8-246)||(29911937-29912175)
chr5 (1-246)||(5623456-5623701)
chr5 (1-152)||(11963579-11963730)
chr5 (15-246)||(11765764-11765994)
chr5 (1-246)||(26561825-26562069)
chr5 (17-246)||(24082005-24082234)
chr5 (36-246)||(37985731-37985940)
chr5 (41-244)||(23411879-23412081)
chr5 (8-238)||(24227987-24228215)
chr5 (88-249)||(37483115-37483277)
chr5 (8-247)||(6454593-6454833)
chr5 (101-246)||(22879787-22879931)
chr5 (178-246)||(11963147-11963215)
chr5 (96-176)||(33628385-33628464)
chr5 (174-244)||(28887783-28887853)
chr5 (83-244)||(21828987-21829150)
chr5 (177-246)||(22056065-22056133)
chr5 (177-246)||(32948965-32949034)
chr5 (178-244)||(33628768-33628834)
chr5 (174-247)||(430686-430759)
chr5 (177-246)||(12030090-12030158)
chr5 (174-238)||(11339163-11339227)
chr5 (174-246)||(13793026-13793098)
chr5 (8-96)||(22881440-22881528)
chr5 (168-247)||(5453535-5453614)
chr5 (177-246)||(25002717-25002786)
chr5 (183-246)||(18533106-18533168)
chr5 (176-246)||(25945103-25945174)
chr5 (184-246)||(2029724-2029786)
chr5 (176-246)||(10780669-10780739)
chr5 (176-246)||(11340163-11340233)
chr5 (169-247)||(18226367-18226445)
chr5 (181-246)||(7526999-7527064)
chr5 (177-246)||(17907373-17907442)
chr5 (177-246)||(18780602-18780671)
chr5 (177-246)||(32968400-32968469)
chr5 (174-246)||(111518-111590)
chr5 (174-246)||(19860213-19860285)
chr5 (183-246)||(21075842-21075906)
chr5 (174-246)||(21228589-21228661)
chr5 (172-248)||(25424240-25424316)
[»] scaffold0115 (1 HSPs)
scaffold0115 (41-246)||(19231-19435)
[»] scaffold0009 (2 HSPs)
scaffold0009 (36-246)||(99014-99225)
scaffold0009 (15-247)||(256842-257073)
[»] scaffold0725 (1 HSPs)
scaffold0725 (36-246)||(6976-7186)
[»] scaffold0561 (1 HSPs)
scaffold0561 (36-246)||(4815-5025)
[»] scaffold0216 (1 HSPs)
scaffold0216 (48-238)||(23194-23384)
[»] scaffold0047 (2 HSPs)
scaffold0047 (36-246)||(73357-73567)
scaffold0047 (3-246)||(2159-2401)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-246)||(99037-99283)
scaffold0003 (176-248)||(217982-218055)
[»] scaffold0017 (1 HSPs)
scaffold0017 (36-246)||(10175-10384)
[»] scaffold0005 (1 HSPs)
scaffold0005 (45-247)||(247879-248081)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-246)||(84314-84558)
scaffold0004 (1-152)||(25536-25687)
scaffold0004 (174-236)||(331380-331442)
[»] scaffold0480 (2 HSPs)
scaffold0480 (49-248)||(11086-11285)
scaffold0480 (174-238)||(7638-7702)
[»] scaffold0387 (1 HSPs)
scaffold0387 (17-246)||(3078-3309)
[»] scaffold0088 (1 HSPs)
scaffold0088 (36-236)||(45654-45854)
[»] scaffold0808 (2 HSPs)
scaffold0808 (3-246)||(5236-5479)
scaffold0808 (174-246)||(3726-3798)
[»] scaffold0442 (2 HSPs)
scaffold0442 (1-246)||(2007-2254)
scaffold0442 (22-246)||(14159-14391)
[»] scaffold0193 (1 HSPs)
scaffold0193 (8-246)||(2833-3070)
[»] scaffold0025 (3 HSPs)
scaffold0025 (3-246)||(2377-2621)
scaffold0025 (177-246)||(7607-7675)
scaffold0025 (25-144)||(51306-51424)
[»] scaffold0331 (1 HSPs)
scaffold0331 (36-199)||(11291-11453)
[»] scaffold0327 (1 HSPs)
scaffold0327 (25-246)||(6948-7168)
[»] scaffold0133 (1 HSPs)
scaffold0133 (49-248)||(3771-3967)
[»] scaffold0148 (1 HSPs)
scaffold0148 (49-246)||(35814-36007)
[»] scaffold0032 (4 HSPs)
scaffold0032 (8-247)||(106657-106894)
scaffold0032 (62-246)||(122050-122231)
scaffold0032 (177-247)||(102010-102080)
scaffold0032 (177-246)||(110590-110659)
[»] scaffold0020 (1 HSPs)
scaffold0020 (78-246)||(103876-104041)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-246)||(99233-99474)
[»] scaffold0151 (1 HSPs)
scaffold0151 (8-246)||(31688-31928)
[»] scaffold0174 (3 HSPs)
scaffold0174 (8-246)||(464-703)
scaffold0174 (175-247)||(22773-22845)
scaffold0174 (3-126)||(22599-22723)
[»] scaffold0219 (2 HSPs)
scaffold0219 (17-135)||(26022-26141)
scaffold0219 (91-248)||(26144-26302)
[»] scaffold0601 (2 HSPs)
scaffold0601 (36-126)||(3448-3538)
scaffold0601 (174-246)||(3587-3659)
[»] scaffold0165 (1 HSPs)
scaffold0165 (49-246)||(20036-20230)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-244)||(34976-35181)
[»] scaffold0010 (2 HSPs)
scaffold0010 (3-246)||(28994-29236)
scaffold0010 (56-151)||(123517-123612)
[»] scaffold0080 (1 HSPs)
scaffold0080 (36-249)||(25684-25900)
[»] scaffold1068 (2 HSPs)
scaffold1068 (174-246)||(1210-1282)
scaffold1068 (25-94)||(1293-1362)
[»] scaffold0057 (1 HSPs)
scaffold0057 (103-244)||(3854-3995)
[»] scaffold0006 (1 HSPs)
scaffold0006 (107-246)||(199487-199626)
[»] scaffold0205 (1 HSPs)
scaffold0205 (36-152)||(4455-4573)
[»] scaffold0086 (1 HSPs)
scaffold0086 (55-246)||(34237-34428)
[»] scaffold0073 (2 HSPs)
scaffold0073 (36-239)||(49388-49594)
scaffold0073 (36-239)||(53919-54125)
[»] scaffold0253 (2 HSPs)
scaffold0253 (169-246)||(9600-9677)
scaffold0253 (169-246)||(19025-19102)
[»] scaffold0107 (1 HSPs)
scaffold0107 (8-248)||(11325-11564)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-246)||(7190-7424)
[»] scaffold0021 (3 HSPs)
scaffold0021 (8-152)||(19860-20001)
scaffold0021 (8-152)||(29436-29577)
scaffold0021 (213-246)||(9448-9481)
[»] scaffold0385 (2 HSPs)
scaffold0385 (175-246)||(12677-12748)
scaffold0385 (44-123)||(12545-12624)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-246)||(15890-16137)
[»] scaffold0001 (3 HSPs)
scaffold0001 (49-246)||(141342-141537)
scaffold0001 (177-246)||(166790-166859)
scaffold0001 (177-246)||(167328-167397)
[»] scaffold0357 (2 HSPs)
scaffold0357 (8-133)||(5732-5856)
scaffold0357 (185-244)||(5649-5708)
[»] scaffold0258 (1 HSPs)
scaffold0258 (169-244)||(8197-8272)
[»] scaffold0786 (1 HSPs)
scaffold0786 (74-236)||(4647-4809)
[»] scaffold0390 (2 HSPs)
scaffold0390 (74-236)||(3180-3342)
scaffold0390 (107-236)||(16164-16294)
[»] scaffold0175 (1 HSPs)
scaffold0175 (174-246)||(7390-7461)
[»] scaffold0028 (2 HSPs)
scaffold0028 (174-246)||(70511-70583)
scaffold0028 (177-246)||(77623-77692)
[»] scaffold0503 (1 HSPs)
scaffold0503 (174-244)||(9251-9321)
[»] scaffold0456 (1 HSPs)
scaffold0456 (169-246)||(12861-12938)
[»] scaffold0162 (2 HSPs)
scaffold0162 (177-246)||(17080-17149)
scaffold0162 (177-246)||(10311-10380)
[»] scaffold0138 (2 HSPs)
scaffold0138 (25-94)||(18673-18741)
scaffold0138 (174-246)||(24640-24712)
[»] scaffold0066 (2 HSPs)
scaffold0066 (177-246)||(43796-43865)
scaffold0066 (177-246)||(51966-52035)
[»] scaffold0409 (2 HSPs)
scaffold0409 (178-246)||(3033-3101)
scaffold0409 (178-246)||(11288-11356)
[»] scaffold0112 (1 HSPs)
scaffold0112 (183-246)||(4784-4847)
[»] scaffold0035 (1 HSPs)
scaffold0035 (181-248)||(64677-64744)
[»] scaffold0161 (1 HSPs)
scaffold0161 (183-245)||(25281-25343)
[»] scaffold0013 (2 HSPs)
scaffold0013 (2-67)||(16723-16789)
scaffold0013 (174-246)||(33367-33439)
[»] scaffold1949 (1 HSPs)
scaffold1949 (177-246)||(1091-1160)
[»] scaffold0236 (1 HSPs)
scaffold0236 (8-247)||(25415-25653)
[»] scaffold0132 (2 HSPs)
scaffold0132 (177-246)||(3695-3764)
scaffold0132 (177-246)||(11655-11724)
[»] scaffold0012 (2 HSPs)
scaffold0012 (177-246)||(36031-36100)
scaffold0012 (176-238)||(249741-249803)
[»] scaffold0022 (3 HSPs)
scaffold0022 (174-246)||(107480-107552)
scaffold0022 (1-54)||(129961-130014)
scaffold0022 (174-246)||(107111-107183)
[»] scaffold0042 (1 HSPs)
scaffold0042 (177-248)||(75061-75132)
[»] scaffold0589 (1 HSPs)
scaffold0589 (174-247)||(5674-5747)
[»] scaffold0329 (1 HSPs)
scaffold0329 (181-246)||(1012-1077)
[»] scaffold0207 (1 HSPs)
scaffold0207 (177-246)||(15820-15889)
[»] scaffold0125 (1 HSPs)
scaffold0125 (177-246)||(29193-29262)
[»] scaffold0118 (1 HSPs)
scaffold0118 (177-246)||(35955-36024)
[»] scaffold0338 (1 HSPs)
scaffold0338 (174-246)||(6556-6628)
[»] scaffold0247 (1 HSPs)
scaffold0247 (174-246)||(16793-16865)
[»] scaffold0095 (1 HSPs)
scaffold0095 (183-247)||(7882-7946)
[»] scaffold0023 (2 HSPs)
scaffold0023 (174-238)||(91832-91896)
scaffold0023 (177-246)||(53705-53774)
[»] scaffold0557 (1 HSPs)
scaffold0557 (183-246)||(438-501)
[»] scaffold0465 (1 HSPs)
scaffold0465 (176-246)||(11601-11672)
[»] scaffold0102 (1 HSPs)
scaffold0102 (174-237)||(37341-37404)
[»] scaffold1140 (1 HSPs)
scaffold1140 (176-238)||(891-953)
[»] scaffold0521 (1 HSPs)
scaffold0521 (168-246)||(6464-6542)
[»] scaffold0467 (1 HSPs)
scaffold0467 (176-246)||(12275-12345)
[»] scaffold0315 (1 HSPs)
scaffold0315 (176-246)||(20324-20394)
[»] scaffold0043 (1 HSPs)
scaffold0043 (176-246)||(83802-83872)
[»] scaffold1486 (1 HSPs)
scaffold1486 (177-246)||(648-717)
[»] scaffold0121 (1 HSPs)
scaffold0121 (213-246)||(6872-6905)
[»] scaffold0016 (1 HSPs)
scaffold0016 (177-246)||(168484-168553)
[»] scaffold0610 (1 HSPs)
scaffold0610 (174-246)||(2866-2938)
[»] scaffold0396 (1 HSPs)
scaffold0396 (174-238)||(14507-14571)
[»] scaffold0395 (1 HSPs)
scaffold0395 (174-238)||(13562-13626)
[»] scaffold0222 (1 HSPs)
scaffold0222 (176-248)||(28146-28218)
[»] scaffold0120 (1 HSPs)
scaffold0120 (170-238)||(26478-26546)
[»] scaffold0058 (1 HSPs)
scaffold0058 (174-246)||(72432-72504)
[»] scaffold0044 (1 HSPs)
scaffold0044 (174-238)||(93838-93902)
[»] scaffold0029 (1 HSPs)
scaffold0029 (177-245)||(67920-67988)


Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 17264630 - 17264388
Alignment:
Q  2 ttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17264630 ttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatactttgg 17264531  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 201  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  17264530 agatgtatgatttatatccgctgcgactgttgaggattttt--atatgcatgcatgtttggtttttgttgaagacgtagtgtctatttcttgaatattta 17264433  T
Q  202 tattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | |||| |||||||||||| ||||||||||||||||||| |||||    
T  17264432 ttttattcgtgtgttttatcgctttaatagaaatagggcattaca 17264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 22499344 - 22499589
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| | ||||    
T  22499344 tttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatattgtattttgatctcatggcatgtagactttg 22499443  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||||||| ||||||||  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| |||||||    
T  22499444 gagatgtatgatctatatccgctgcaactgttgagaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtctatttcttgaatattt 22499542  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||||| |  ||||||||| ||||||||||||||||||||||||||    
T  22499543 atattattcacgtgttttatcgctttaatagaaatagggcgttacat 22499589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 23118880 - 23119122
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||     
T  23118880 tttattctggatttatttatgttgtggagatttgcccatttgtcgggatttggataatttttatgatgttgtattttgatctcatggcatgtatacttt- 23118978  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    |||||||| ||||||  || |||||||| |||||| |||||||    
T  23118979 gaggtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatattgatttggtttttgttgatcacatagcgtctgtttcttgaatattt 23119078  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
     |||||| || ||||||||| ||||||||||||||||| |||||    
T  23119079 ttattattcgcgtgttttatcgctttaatagaaataggacgtta 23119122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 17499980 - 17499747
Alignment:
Q  13 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 112  Q
    ||||||| |||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  17499980 ttatttacgttgtggagatttacccatttgttgggattcggagaatttatatgatgatgtattttgattgcatggcatgtatattttggagatgtatgat 17499881  T
Q  113 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    ||||||||||||||||||||||  | |||||||||| |||     ||| |||| ||||||||||||| |||||||||||| |||||||||||||| || |    
T  17499880 ttatatccgctgcgactgttgagaaattttatatattcatgttgatttagtttttgttgaagacgtaacgtctatttcttgaatatttatattattcgcg 17499781  T
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||| ||||||||||||    
T  17499780 tgttttatcgctttaatagaagtagggcgttaca 17499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 24554623 - 24554859
Alignment:
Q  10 gatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat 109  Q
    ||||||||||||||||||||||||  ||| ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24554623 gatttatttatgttgtggagatttacccaattgtcggaattcagagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtat 24554722  T
Q  110 gatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatc 208  Q
    |||||||||||||||||||||||||  |||||||||||| |     ||||||| ||| |||||| ||||| ||||||||||||| ||||||||||||||     
T  24554723 gatttatatccgctgcgactgttgataatttttatatatac-ccgttgtttggatttttgttgatgacgtggcgtctatttcttgaatatttatattatt 24554821  T
Q  209 cgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || ||||||||| ||||||||||| |||||||||||||    
T  24554822 cgcgtgttttatcgctttaatagagatagggcgttaca 24554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 33170385 - 33170141
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||     
T  33170385 tttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaattt-tatgatgatgtattttgatctcatgacatgtatactttt 33170287  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    ||| ||||||||||||||| ||||| ||| ||||   ||||||||||||| |  ||| ||| |||  |||||| ||||| ||||||||||||| ||||||    
T  33170286 gaggtgtatgatttatatctgctgcaactattgagattttttatatatgcct-gatgatttcgttattgttgatgacgtggcgtctatttcttgaatatt 33170188  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| || ||||||||| ||||||||| |||||||||||||||    
T  33170187 tatattattcgcgtgttttatcgctttaataaaaatagggcgttaca 33170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23216789 - 23216547
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||     
T  23216789 tttattctggatttatttatgttgtatagatttgcccatttgtcgggaaatggagaatttttatgatgatgtattttgatctcatggcatgtatacttt- 23216691  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||| |||||||| ||||| ||||||||  ||||||||||||||||   ||||||| || ||||||||||||| |||||||||||| |||||||    
T  23216690 gaggtgtatggtttatatcagctgcaactgttgagaatttttatatatgcat-gttgtttggatt-tgttgaagacgtaacgtctatttcttgaatattt 23216593  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| | ||||||||||||| | |||||||    
T  23216592 atattattcgcgtgttttatcgttttaatagaaatatgacgttaca 23216547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 5 - 244
Target Start/End: Original strand, 18043195 - 18043433
Alignment:
Q  5 ttctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 104  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||     
T  18043195 ttctggatttatttatgttgtggagatttgctcatttgtcgggatttggagaatctttatgatgatgtattttgacctcatggcatgtatacttttgagg 18043294  T
Q  105 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||||||||||||||  |||| ||||||||  |||||||||||||| |   |||||||  | |||||| || || ||||||||||||| ||||||| |||    
T  18043295 tgtatgatttatatcttctgcaactgttgagaatttttatatatgcct-gttgtttggaatttgttgatgatgtggcgtctatttcttgaatatttgtat 18043393  T
Q  205 tatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||| || ||||||||| |||||||||||||| ||||||||    
T  18043394 tattcgcgtgttttatcgctttaatagaaattgggcgtta 18043433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 20707915 - 20707675
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||||||||||| |  ||||||||||||||||| ||||||| ||||||| ||||||||||||| ||| |||||||| ||| ||| |||    
T  20707915 tggatttatttatgttgtggagatctacccatttgtcgggatttgaagaatttttatgatgttgtattttgatcttatgtcatgtatacttttgaggtgt 20707816  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| ||| |||| ||||| ||||||||  ||||||||||||||||   ||||||| || |||||| || || ||||||||||||| ||||||| ||||||    
T  20707815 atggtttctatctgctgcaactgttgagaatttttatatatgcat-gttgtttggattttgttgatgatgtggcgtctatttcttgaatatttgtattat 20707717  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttacattc 249  Q
     |  ||||||||| ||||||||||||||||||||||||||||    
T  20707716 tcacgtgttttatcgctttaatagaaatagggcgttacattc 20707675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25608033 - 25607789
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||     
T  25608033 tttattctggacttgtttatgttgtgaagatttgcccaattgtcgggatttggagaattgatatgatgatgtattttgatctcatggcatgtatacttt- 25607935  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt-ggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    ||||||||||||||||||||||||||||||||||  |  |||||||||||||   ||||| | ||  ||||||||| ||||| |||||||||| |||||     
T  25607934 gagatgtatgatttatatccgctgcgactgttgagaaaatttatatatgcat-gttgtttagattgttgttgaagaagtagcatctatttcttgaatata 25607836  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | | |||| ||  |||||||| |||||||||||| ||||| ||||||    
T  25607835 tgttttattcgcatgttttatcgctttaatagaagtagggagttaca 25607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 45561752 - 45561952
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||| |||    
T  45561752 tggatttatttatgttgtggaggtttgccaatttgtcgggatttggagaatttatatgatgatgtattttgatctcttggcatgtatactcttgaggtgt 45561851  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||||||||||||| ||||||||||||  ||||| ||||| ||||     |||||||| ||  |||| || |||||||||||||||| ||||||||||||    
T  45561852 atgatttatatccgatgcgactgttgataattttaatatacgcatgttgatttggtttttgaattgatgatgtagcgtctatttcttgaatatttatatt 45561951  T
Q  206 a 206  Q
    |    
T  45561952 a 45561952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 57 - 247
Target Start/End: Original strand, 22725530 - 22725719
Alignment:
Q  57 atttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacat 156  Q
    |||| ||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||   |    
T  22725530 atttttatgatgatgtatattgatcttatgacatgtatcttttggagatgtatgatttatatccgctgcgactgttgaggaattttatatatgcat-gtt 22725628  T
Q  157 gtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||| | | ||||||||| |||||||||||||||| |||||||  ||||| |  ||||||||| ||||||||||||||||| ||||||||    
T  22725629 gtttgatatttgttgaagatgtagcgtctatttcttgaatatttggattattcacgtgttttatcgctttaatagaaataggacgttacat 22725719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 19334098 - 19334296
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  ||||||||| ||| |||| |||||||||||||||| ||||||||||||| |||||||  ||| ||||||||    
T  19334098 tttggagaattt-tatgatgatgtattc-gatctcatgacatatatactttggagatgtatgatctatatccgctgcggctgttgagaattcttatatat 19334195  T
Q  149 gcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||   ||||||| ||| |||||| |||||| |||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  19334196 gcatgt-tgtttggatttttgttgatgacgtaacgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacat 19334294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 11600173 - 11599965
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||| |||||||||  | |||||||| |||| || |||||||||||||||||||||     
T  11600173 ccatatgttgggatttgaagaatttatatgatgatgtattttgatcttatggcatgtcgactttggagaagtattatctatatccgctgcgactgttgat 11600074  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| ||||| |   |||| || ||||||||| | ||||||||||||    
T  11600073 aatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgttttaatagaaat 11599974  T
Q  236 agggcgtta 244  Q
    |||||||||    
T  11599973 agggcgtta 11599965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 22883881 - 22883680
Alignment:
Q  42 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttt 141  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||  | |||    
T  22883881 gtcgggatttggagactttatatgatgatgtatattgatctcatggcatgtata-cttggagatgtatgatttatatccgttgcgactgttgagaaattt 22883783  T
Q  142 tatatatgcatacatgtt--tggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaataggg 239  Q
    ||||    ||| ||||||  || | | |||||||||||||||||||||||||| ||| | | | |||| || ||||||||| ||||||||| ||||||||    
T  22883782 tata----catgcatgttgatgttatttgttgaagacgtagcgtctatttcttgaatttatgttttattcgcgtgttttatcgctttaatataaataggg 22883687  T
Q  240 cgttaca 246  Q
    |||||||    
T  22883686 cgttaca 22883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 246
Target Start/End: Complemental strand, 24237151 - 24236922
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||||||| ||| || |||||||| || |||| ||| | |  |||||||| ||||||| ||| |||||||||||||||||||||| |||    
T  24237151 atttatgttgttgagattttgcccatgtgtcgggactttgagattttttgt--tgatgtatattgatcttatgacatgtatattttggagatgtatcatt 24237054  T
Q  114 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 213  Q
    ||||||| || ||| ||||||  ||||||||||||||||     |||||||| |||||||||||||||||||||||||| |||| ||||||||| ||  |    
T  24237053 tatatccactacgaatgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtagcgtctatttcttgaata-ttatattattcgcat 24236955  T
Q  214 gttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| ||||||||||||||| |||||||||    
T  24236954 gttttatcgctttaatagaaataaggcgttaca 24236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 246
Target Start/End: Complemental strand, 11542128 - 11541895
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||||||| ||| || |||||||| ||||||| ||| |||| |||||||  ||||||| ||| |||||||| |||||||||||||||||    
T  11542128 atttatgttgttgagattttgcccatgtgtcgggacttggagatttt-tatgttgatgtaaattgatcttatgacatgtatactttggagatgtatgatt 11542030  T
Q  114 tatatccgctgcgactgttgaagatttttatatatgcatacatgtt----tggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 209  Q
    |||||||| | ||||||||||  ||||||||||||  || ||||||    |||||| | ||| ||| |||||||||||||||||||||  | | |||| |    
T  11542029 tatatccgttacgactgttgagaatttttatatat--atgcatgttgatttggtttttattgtagatgtagcgtctatttcttaaataaatgttttattc 11541932  T
Q  210 gtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | ||||||||| |||||||||||||||||||||||||    
T  11541931 gcgtgttttatcgctttaatagaaatagggcgttaca 11541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 36 - 234
Target Start/End: Complemental strand, 16000280 - 16000085
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||    
T  16000280 ccatatgtcaggatttagagaatttatatgatgatgtatattgatctcatgacatgtatacattagagatgtatgatttatatccgctgcgactgttgaa 16000181  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaa 234  Q
     | |||||| |||||||   || |  |||| ||||||||| |||||||||||||||||||||| |   |||| ||||| ||||||  ||||||||||||    
T  16000180 aaattttatgtatgcat-gttgat--gtttttgttgaagatgtagcgtctatttcttaaatatatgctttattcgtgtattttatcactttaatagaaa 16000085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7468433 - 7468220
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||| || ||||||| ||||| ||||| |||||||||||||  |||     
T  7468433 tttattttggatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtattctttt 7468334  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||  ||| || |||||||||||||| ||||||||  |||||||||| |   |   ||||||| || |||||| ||||| |||| |||||||| |||||||    
T  7468333 gaagtgtgtggtttatatccgctgcaactgttgagaatttttatatgtctgt---tgtttggattttgttgatgacgtggcgtatatttcttgaatattt 7468237  T
Q  201 atattatccgtgtgttt 217  Q
    ||||||| | |||||||    
T  7468236 atattattcatgtgttt 7468220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 18263516 - 18263687
Alignment:
Q  74 ttttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa 173  Q
    ||||||| ||||| |||||||| ||| ||| |||||| ||||||||||||||||||||||| || ||||||| ||| ||     ||||| || ||||||     
T  18263516 ttttgatatcatgacatgtatacttttgaggtgtatggtttatatccgctgcgactgttga-gaattttatacatggatgttgttttggattttgttgat 18263614  T
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||  |||||||||||| ||| |||||||||| || ||||||||||||||| |||||||||||||||||||    
T  18263615 gacgtgacgtctatttcttgaatttttatattattcgcgtgttttattgctttgatagaaatagggcgttaca 18263687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 15931451 - 15931213
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  ||| |||  ||||||||||||| | |||| | || |||| |||| || ||||||| |||||||||||||  |||| || |     
T  15931451 tggatttattcatgttg--gagttttacccatttgtcgggactgggagtacttttatgttgatatacttttgatatcatggcatgtatgctttgaag-ta 15931355  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt--ggtttctgt-tgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||||   |||||  || || ||| ||| ||||||||||||||||||| ||||| | ||    
T  15931354 tatggtttatatccgctgcgactgttgagaatttttatacatgcatgt-tgttttgggattttgtatgatgacgtagcgtctatttcttgaatatatgta 15931256  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || ||||||||||||||||||| |||||||||||||||    
T  15931255 ttattcgcgtgttttattgctttaataaaaatagggcgttaca 15931213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 22311156 - 22311040
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||| ||| ||||||||||||||| | || ||| |||||     
T  22311156 ccatatgtcgggatttggagaatttacatgatgatgtattttgatctcatgacatgaatacttttgaggtgtatgatttatatcagttgggacggttgag 22311057  T
Q  136 gatttttatatatgcat 152  Q
     ||||||||||||||||    
T  22311056 aatttttatatatgcat 22311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 24266122 - 24265885
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||| |||||||||  ||| |||||| ||||| |||||||||  |||||||||||| ||||  |||| |||||||| |||| ||  |     
T  24266122 tggatttatt-atgttttggagatttacccagttgtcgagatttcggagaattttgatgatgatgtatgttgacatcatagcatgtatgtttttgaatta 24266024  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    |||  |||||||||||||| |||||||| || ||||||| ||||||     ||||  || |||||| ||||| ||||||||||||| |||||||||||||    
T  24266023 tattgtttatatccgctgcaactgttga-gaattttatacatgcatgttgttttgaattttgttgatgacgtggcgtctatttcttgaatatttatatta 24265925  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | || |||||||||  ||| |||| |||||||||||||||    
T  24265924 ttcgcgtgttttatcacttaaataaaaatagggcgttaca 24265885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 37655744 - 37655929
Alignment:
Q  62 tatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttg 161  Q
    |||||| ||||||||| || |||||||||||||  |||| || | |||| |||||||||||||||||||||||  ||||||||||||||||     ||||    
T  37655744 tatgattatgtattttaatatcatggcatgtatgctttgaag-tatatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgttttg 37655842  T
Q  162 gtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||  |||| |||||||||||||||| || ||||| |  ||||| |||||||||||| ||||||||||| |||||| ||||||    
T  37655843 gtttttgtattgatgacgtagcgtctattttttgaatatatgaattattcgtgtgttttatcgctttaatagagatagggtgttaca 37655929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 24905987 - 24905885
Alignment:
Q  96 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaa 195  Q
    |||||||||||||||||||||||||||| ||||||||||  || ||||| |||||||  ||||||||||| |||||||||||||| ||||||||||| ||    
T  24905987 ttttggagatgtatgatttatatccgctacgactgttgagaatatttatgtatgcatgtatgtttggtttttgttgaagacgtagtgtctatttcttgaa 24905888  T
Q  196 tat 198  Q
    |||    
T  24905887 tat 24905885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 26009558 - 26009321
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| ||||||| ||||||| ||||||||||||| ||||| || |     
T  26009558 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaaattttatgttgatgtagttttgatatcatggcatgtatgttttgaag-ta 26009462  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||||||||||| ||||||| || |||||||| | ||||   ||  ||||| || || |||| ||||||| ||||||||||| ||||| | |     
T  26009461 tatggtttatatccgctgctactgttg-agttttttatacacgcat-gttgaatttggattttgtttgatgacgtagtgtctatttcttgaatatatgtt 26009364  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || ||||||||| ||||||||| |||||||||||||||    
T  26009363 ttattcgcgtgttttatcgctttaatataaatagggcgttaca 26009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 23350306 - 23350163
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    |||| |||||||||||||||| ||||||||| ||| |||||| ||| |||||||| ||||| |   ||||||| ||||||| | | ||||||||||||||    
T  23350306 tattatggatttatttatgttatggagattttgcccatttgttgggttttggagattttatttatggatgtatgttgatcttacgacatgtatattttgg 23350207  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttata 145  Q
    |||  ||||| ||||||||||||| ||||||||  |||||||||    
T  23350206 agacatatgaattatatccgctgctactgttgagaatttttata 23350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 246
Target Start/End: Complemental strand, 29295974 - 29295769
Alignment:
Q  39 tttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagat 138  Q
    |||||||| | |||||||| || |||||| |||||||| ||| ||||| |||||||| |||| || | |||| ||||||||||||||||||||||| |||    
T  29295974 tttgtcggaacttggagaacttttatgattatgtattt-gatatcatgacatgtatactttgaag-tatatggtttatatccgctgcgactgttga-gat 29295878  T
Q  139 ttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    ||| ||| ||||||     ||||| || ||  |||| |||||  |||||||||||| ||||| |   |||| |||||||||||| |||||||||||||||    
T  29295877 ttt-atacatgcatgttgttttggattttggtttgatgacgtgacgtctatttcttgaatatatgccttattcgtgtgttttatcgctttaatagaaata 29295779  T
Q  237 gggcgttaca 246  Q
    ||||||||||    
T  29295778 gggcgttaca 29295769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 21234223 - 21234312
Alignment:
Q  158 tttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||| || || ||||||||||||| |||||||||||||| || |||||||||  |||||||||||||||| ||||||||    
T  21234223 tttggtttttgttgatgatgtggcgtctatttcttgaatatttatattattcgcgtgttttatcactttaatagaaataggacgttacat 21234312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 27233352 - 27233477
Alignment:
Q  121 gctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttat 220  Q
    ||||||||||||||  |||||||| |||||||     ||||| || |||||| || ||  |||||||||||| |||||||||||||| || ||||||||     
T  27233352 gctgcgactgttgagaatttttatgtatgcatgttgttttggattttgttgatgatgtgacgtctatttcttgaatatttatattattcgcgtgttttac 27233451  T
Q  221 tgctttaatagaaatagggcgttaca 246  Q
     |||||||||||||||||||||||||    
T  27233452 cgctttaatagaaatagggcgttaca 27233477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 5851627 - 5851390
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  || ||||  ||||||||||| | |||||||| || |||| ||||||| ||||||| ||||| |||||||  ||  ||  |     
T  5851627 tggatttattcatgttg--gatatttacccatttgtcggaacttggagaacttttatgttgatgtacttttgatatcatgacatgtatggtt--gaagta 5851532  T
Q  107 tatgatttatatccgctgcgactgttga-agatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||| ||||||||||||||||||||||| |  |||||||| ||||||     ||||| || |||  || ||||||| ||||||||||| ||||| | |||    
T  5851531 tatggtttatatccgctgcgactgttgagatttttttatacatgcatgttgttttggattttgtaagatgacgtagtgtctatttcttgaatatatgtat 5851432  T
Q  205 tatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||| || ||||||||| |||||||||||||||||| ||||||    
T  5851431 tattcgcgtgttttatcgctttaatagaaatagggtgttaca 5851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 22317554 - 22317445
Alignment:
Q  83 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcg 182  Q
    ||||||||||||| ||| ||| | ||||||||||||||||||| ||||||||  ||||||||||| ||||     |||||||| | ||||||||||| ||    
T  22317554 catggcatgtatacttttgaggtatatgatttatatccgctgccactgttgagaatttttatatacgcatgttgatttggtttttattgaagacgtaacg 22317455  T
Q  183 tctatttctt 192  Q
    ||||||||||    
T  22317454 tctatttctt 22317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 23229502 - 23229564
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    ||||||||||||||||||| ||||||  |||||| |||||||||||| |||||||||||||||    
T  23229502 gacgtagcgtctatttcttgaatattattattattcgtgtgttttatcgctttaatagaaata 23229564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 21234093 - 21234161
Alignment:
Q  50 ttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatc 119  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||||| ||| ||| |||||||||||||||    
T  21234093 ttggagaattt-tatgatgatatattttgatatcatgacatgtatacttttgaggtgtatgatttatatc 21234161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18770355 - 18770419
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||||||||  | |||||| ||  |||||||||||||||||||||||||| ||||||||    
T  18770355 tctatttcttaaataaatgtattattcgcatgttttattgctttaatagaaataggtcgttacat 18770419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 24547112 - 24547040
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  24547112 gacgtagcctctatttcttaaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 24547040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 33613038 - 33613144
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctg 124  Q
    |||||||||  |||||||||| || |||||||| || |||||| |||||||||||| ||||| ||| |||  |||| || | ||| ||||| ||||||||    
T  33613038 tggagatttatccatttgtcgagacttggagaacttttatgattatgtattttgatatcatgacatatatgctttgaag-tatattatttagatccgctg 33613136  T
Q  125 cgactgtt 132  Q
    ||||||||    
T  33613137 cgactgtt 33613144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 18120615 - 18120680
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| |||| || |||| | || ||||||||| ||||||||||||||| |||||||||    
T  18120615 cgtctatttcttgaatacttgtattgttcgcgtgttttatcgctttaatagaaatatggcgttaca 18120680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 21496547 - 21496616
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  21496547 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 21496616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 21695541 - 21695472
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||||||||  | |||||| ||  ||||||| ||||||||||||||||||| ||||||    
T  21695541 gtagcatctatttcttaaataaatgtattattcgcatgttttaatgctttaatagaaatagggtgttaca 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 23833188 - 23833156
Alignment:
Q  214 gttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||||||||||||||||    
T  23833188 gttttattgctttaatagaaatagggcgttaca 23833156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 39449039 - 39449103
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| |||||||    
T  39449039 tctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttacat 39449103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 17731784 - 17731819
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17731784 tgttttattgctttaatagaaatagggtgttacatt 17731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 18120540 - 18120587
Alignment:
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatg 149  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||||||    
T  18120540 agatgtatgatttatatccgttgcgaatgttgataatttttatatatg 18120587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 6776787 - 6776857
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  6776787 cgtagcctctatttcttgaatacatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 6776857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 20479539 - 20479477
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| |||||||||| ||||  | |||||| ||| ||||| ||||||||||||||||||||    
T  20479539 cgtagcctctatttcttgaataaatgtattattcgtatgtttaattgctttaatagaaatagg 20479477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 22909894 - 22909964
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||| |||||| ||||| | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  22909894 cgtagcctctttttcttgaatatatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 22909964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 41509851 - 41509921
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  41509851 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagggtgttaca 41509921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 22136688 - 22136619
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  22136688 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 22136619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 22319736 - 22319695
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtatttt 77  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  22319736 ccatatgtcgggatttagagaatttatatgatgatgtttttt 22319695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 22884370 - 22884337
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| ||||||||||||||||||||||||||||    
T  22884370 tgtttaattgctttaatagaaatagggcgttaca 22884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 22738183 - 22738255
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| | | |||| || | ||||||| ||||| ||||||||| ||| |||||    
T  22738183 gacgtagcgtctatttcttgaatatatgttttattcgcgagttttatcgctttgatagaaatatggcattaca 22738255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 28542794 - 28542730
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| | |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||    
T  28542794 gacgtaacatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagg 28542730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 38531523 - 38531451
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| ||||||| || ||||  | |||||| ||  |||||||||||||||||| |||||||| ||||||    
T  38531523 gacgtagcatctatttattgaataaatgtattattcgcatgttttattgctttaatataaatagggtgttaca 38531451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 9e-86; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 15551935 - 15552183
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  15551935 tttattctagacttatttatgttgtggagatttgcccatttgtcgggatttagagaatttatatgatgatgtatattgatctcatgacatgtatattttg 15552034  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||     |||||||| ||||||||||||| |||||||||||| |||||||    
T  15552035 gagatgtatgatttatatctgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgaagacgtaacgtctatttcttgaatattt 15552134  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacattc 249  Q
     |||||| |||||||||||  ||||||||||| ||||||||||||||||    
T  15552135 ttattattcgtgtgttttaccgctttaatagagatagggcgttacattc 15552183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 43429577 - 43429821
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||     
T  43429577 tttattctggatttatttatgttgtggagatttgcccatttgttgggatttggagaatttttatgatgatgtattttgatctcatggcatgtatactttt 43429676  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||| |||||||||||||| ||||||||| |||||||||||||| |     ||| |||| |||||| | ||| ||||||||||||| |||| ||    
T  43429677 gaggtgtatggtttatatccgctgcaactgttgaaaatttttatatatgcctgttgattttgtttttgttgatgtcgtggcgtctatttcttgaata-tt 43429775  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||    
T  43429776 atattattcgcgtgttttatcgctttaatagaaatagggcgttaca 43429821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 8602405 - 8602195
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  8602405 ccatatgtcgggacttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatgtatgacttatatccgctgcgactgttgag 8602306  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     | ||||||||||||||  |||||||| || |||||||||||||||||||||||||| ||||||||||||||  | ||||||||| ||||||||||||||    
T  8602305 aaattttatatatgcatgtatgtttggcttttgttgaagacgtagcgtctatttcttgaatatttatattatttgcgtgttttatcgctttaatagaaat 8602206  T
Q  236 agggcgttaca 246  Q
    | || ||||||    
T  8602205 aaggtgttaca 8602195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 6817672 - 6817863
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  6817672 tttattttggatttatttatgttgtgaagatttgcccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatactttt 6817771  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctt 192  Q
    ||| ||||||||||||||||||||||||||||||  ||||||||||||||||     |||||||| |||||| || ||||||||||||||||    
T  6817772 gaggtgtatgatttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgatgtagcgtctatttctt 6817863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17320617 - 17320860
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| | |||     
T  17320617 tttattttggatttatttatgttgtggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttggtctcatggcatgtagacttta 17320716  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||| ||||| ||||||||||||  ||| |||  |||||||||||||| |   ||||||| || |||||| || || ||||||||||| | |||||||    
T  17320717 gagatgaatgatctatatccgctgcagctg-tgagaatttttatatatgcct-gttgtttggattttgttgatgatgtggcgtctatttcctgaatattt 17320814  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  17320815 atattattcgcgtgttttattgctttaatagaaatagggcgttaca 17320860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 5230651 - 5230897
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||  |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||| |||||    
T  5230651 tttattctatatttatttatgttgtggagatttacccatttgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatgttttg 5230750  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||||||||| |||||| ||| ||||  ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| ||||| |    
T  5230751 gagatgtatgatttatatacgctgcaactattgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatat 5230850  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
       |||| || |||||||||  || ||||||||||||||||||||||    
T  5230851 gctttattcgcgtgttttatcactgtaatagaaatagggcgttacat 5230897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 22637429 - 22637222
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| || |||||| |||||||||||||| ||||||||     
T  22637429 ccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgacatgtatactttg-aggtgtatggtttatatccgctgcaactgttga- 22637332  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
    ||  ||||||||||| |   ||||||| || |||||| ||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  22637331 gaaatttatatatgcctgt-tgtttggattttgttgatgacgtggcgtctatttcttcaatatttatattattcgcgtgttttattgctttaatagaaat 22637233  T
Q  236 agggcgttaca 246  Q
    | |||||||||    
T  22637232 atggcgttaca 22637222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 12950670 - 12950459
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||     
T  12950670 ccatttatcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgag-ggtatgatttatatccgctgcgactgttgag 12950572  T
Q  136 gatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaa 233  Q
     ||||||||| ||||||     ||| |||| ||  |||| ||||||||||||||||||| |||||||||||||| || ||||||||| | ||||||||||    
T  12950571 aatttttatacatgcatgttgattttgtttttgaattgatgacgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgttttaatagaa 12950472  T
Q  234 atagggcgttaca 246  Q
    |||||| ||||||    
T  12950471 atagggtgttaca 12950459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17760843 - 17761084
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  17760843 tttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatactttg 17760942  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||    |||||| |||||||||||||| ||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||| ||||||| |||||||    
T  17760943 ga----tatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtccatttcttgaatattt 17761038  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
      ||||| || ||||||||| | ||||||||  |||||||||||||    
T  17761039 cgattattcgcgtgttttatcgatttaatagggatagggcgttaca 17761084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19062163 - 19062404
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  19062163 tttattatggatttatttatgttgttgagatttgccaatttgtcgagatttggagaatttatatgatgatgtattttgatcttatgacatgtatactttg 19062262  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||    |||||| |||||||||||||| ||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||| ||||||| |||||||    
T  19062263 ga----tatgatctatatccgctgcgaatgttgagaatttttatatatgcatgttaattttgttttcgttgaagacgtagcgtccatttcttgaatattt 19062358  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
      ||||| || ||||||||| | ||||||||  |||||||||||||    
T  19062359 cgattattcgcgtgttttatcgatttaatagggatagggcgttaca 19062404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 37918959 - 37919163
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  37918959 tgtcgggacttggagaatttttatgatgatgtattttgatctcatgacatgtatattttggagatgtatgatttctatccgctgcgactgttgagaattt 37919058  T
Q  141 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggc 240  Q
    ||||||||||||   || || | |||| ||| |||||||||| | ||||||| ||||  |   |||| |||||||||||| |||||||||||||||||||    
T  37919059 ttatatatgcat-gttgatttggttcttttgtagacgtagcgacgatttcttgaataaatgatttattcgtgtgttttatcgctttaatagaaatagggc 37919157  T
Q  241 gttaca 246  Q
    ||||||    
T  37919158 gttaca 37919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21168743 - 21168988
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||| | |     
T  21168743 tttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactatt 21168842  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||  ||||||||||||||||||||| ||||||||  ||||||||| || |||     ||||| || |||||| |||||  |||||||||||| |||| ||    
T  21168843 gatgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtctatttcttgaataatt 21168942  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || |||| |||  |||||||||||||||| ||||||||    
T  21168943 atattattcgcgtgtattaccgctttaatagaaatagagcgttaca 21168988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 41659750 - 41659507
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||| |||     
T  41659750 tttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcatgaaatgtatactttt 41659651  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| | |||| |||||||||||||| | ||||||  |||||  || |||||| |   ||||| || |||||| |||||   ||||||||||| |||||||    
T  41659650 gaggtttatggtttatatccgctgcaattgttgagaattttattacatgcatgctattttggattttgttgatgacgtgatgtctatttcttgaatattt 41659551  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||| |  |||||||||  ||||||||||||||||||||||    
T  41659550 atattattctcgtgttttatcactttaatagaaatagggcgtta 41659507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 14182523 - 14182673
Alignment:
Q  96 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaa 195  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||     |||| ||| |||||||||||||||||||||||||| ||    
T  14182523 ttttggcgatgtatgatttatatccgctgcgaccgttgaaaatttttatatatgcatgttgatttgatttttgttgaagacgtagcgtctatttcttgaa 14182622  T
Q  196 tatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||||||| || ||||||||| |||||||||||||||||||||||||    
T  14182623 tattcatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 14182673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 246
Target Start/End: Complemental strand, 17391126 - 17390892
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||| ||||||| || ||||||||||| |||| |||||||  |||| ||| ||||| | ||| ||||||||||| ||||||||||||||    
T  17391126 atttatgttgttgagttttggcccatatgtcgggatttagagattttatatattgatatatattgattttatgacatgtatattt-ggagatgtatgatt 17391028  T
Q  114 tatatccgctgcgactgttga-agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgt- 211  Q
    |||||||||||||||||||||   |  |||||||||||||   ||||||   | |||||||||||||||||||||||||| |||||||||||||| |||     
T  17391027 tatatccgctgcgactgttgagcaaaatttatatatgcat-gttgtttgaaatttgttgaagacgtagcgtctatttcttgaatatttatattattcgtc 17390929  T
Q  212 --gtgttttattgctttaatagaaatagggcgttaca 246  Q
      |||| |||| ||||||||||||||| |||||||||    
T  17390928 gcgtgtattatcgctttaatagaaataaggcgttaca 17390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 8687968 - 8687761
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||  ||||  ||||||||||||||||||||||||||||||||     
T  8687968 ccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtat-gtttgatgatgtatgatttatatccgctgcgactgttgag 8687870  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     | |||||||||| |||  ||   || | | ||||||||||||| |||||||||||| ||||| |   |||| ||| |||||||| |||||||||||| |    
T  8687869 aaattttatatatccat--attgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctttaatagaagt 8687772  T
Q  236 agggcgttaca 246  Q
    |||||||||||    
T  8687771 agggcgttaca 8687761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 9039837 - 9039630
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||  ||||  ||||||||||||||||||||||||||||||||     
T  9039837 ccatatgtcgggatttggagattttatatcatgatgtatattgatttcatggcatgtat-gtttgatgatgtatgatttatatccgctgcgactgttgag 9039739  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     | |||||||||| |||  ||   || | | ||||||||||||| |||||||||||| ||||| |   |||| ||| |||||||| |||||||||||| |    
T  9039738 aaattttatatatccat--attgatgttatttgttgaagacgtaacgtctatttcttgaatatatgctttattcgtatgttttatcgctttaatagaagt 9039641  T
Q  236 agggcgttaca 246  Q
    |||||||||||    
T  9039640 agggcgttaca 9039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 18968204 - 18967966
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  ||||||||| ||||| ||||||||||||  || |||    
T  18968204 tggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagatattttgatatcatgacatgtatattttttaggtgt 18968105  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| |||||||||||||||||||||| | ||||||||| |||| |     ||||  || |||||| |||||  |||||||||||| ||||||||| ||||    
T  18968104 atgctttatatccgctgcgactgttgga-atttttatacatgcgtgttgttttgaattttgttgatgacgtgacgtctatttcttgaatatttatcttat 18968006  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
      | |||| |||| ||||| |||||||||||| |||||||    
T  18968005 ttgcgtgtcttatcgctttgatagaaatagggtgttacat 18967966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 6230712 - 6230942
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||  |||||||| ||  | | |||||| ||||    
T  6230712 ttatgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcattacatgtatacttctgcggtgtatggttta 6230811  T
Q  116 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 215  Q
    ||| ||||||||||||||| |||||||||| ||||||     ||||| ||  ||||| ||||   |||||||||||| ||||||| |||||| ||  |||    
T  6230812 tattcgctgcgactgttgaggatttttatacatgcatgttgttttggatttggttgatgacgcgacgtctatttcttgaatatttgtattattcgcatgt 6230911  T
Q  216 tttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||||||||||||||||||    
T  6230912 tttatcgctttaatagaaatagggcgttaca 6230942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 10902579 - 10902469
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||     
T  10902579 ccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatacttttgaggtgtataatttatatccgctgcaactgttgag 10902480  T
Q  136 gatttttatat 146  Q
     ||||||||||    
T  10902479 aatttttatat 10902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 31416331 - 31416500
Alignment:
Q  76 ttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaaga 175  Q
    ||||||||||||||| |||| |||| || |||||| ||||||| |||||| ||||||||  |||||||||||||| |   ||||||| || |||||| ||    
T  31416331 ttgatctcatggcatatatactttg-aggtgtatggtttatattcgctgcaactgttgagaatttttatatatgcctgt-tgtttggattttgttgatga 31416428  T
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||| ||||||||||||| |||||||||||||| || ||||||||| ||||||||||||| ||||||||||||    
T  31416429 cgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaacagggcgttacat 31416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 40041635 - 40041844
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||| ||| ||||||||||||| |||| ||||||||||||||| || ||| |||| ||| ||| ||||||||||||||| | |||||||||| |  ||||    
T  40041635 tgtcaggacttggagaatttatgtgataatgtattttgatctcttgacatatatacttttgaggtgtatgatttatatctgatgcgactgttaagaattt 40041734  T
Q  141 ttatatatgcatacatg-tttggtttctgttgaagacgt---agcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    ||||||||||||   || |||||||| ||||||||||||   |||||||||||||| ||||  | | |||| || |||||||||  |||||||| |||||    
T  40041735 ttatatatgcatgattgatttggtttttgttgaagacgtagcagcgtctatttcttgaataaatgttttattcgcgtgttttatcactttaatataaata 40041834  T
Q  237 gggcgttaca 246  Q
    ||||||||||    
T  40041835 gggcgttaca 40041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 55513830 - 55513981
Alignment:
Q  95 attttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaa 194  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||  ||||||||  | ||||||||| |||||||||||||||| |    
T  55513830 attttggagatgtatgacttatatccgctgcgactgttgagaaattttatatatgcatgtatgtttggcctttgttgaagatgtagcgtctatttcttga 55513929  T
Q  195 atatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |   |||| || ||||||||| ||||||||||||||| || ||||||    
T  55513930 atatctgctttattcgcgtgttttatcgctttaatagaaataaggtgttaca 55513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 4164298 - 4164520
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| | |||||||  ||| |||||||||||| |||||||||  ||||||||||||||| || |||||||||||||| ||| ||  | |||| ||||    
T  4164298 ttatgttttagagatttacccaattgtcgggattttggagaattttaatgatgatgtattttaatatcatggcatgtatacttttgaattttatggttta 4164397  T
Q  116 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 215  Q
    |||||||||    ||||||  ||||||||| ||||||     ||||| || |||||| |||||  |||||||||||| |||||||||||||| || ||||    
T  4164398 tatccgctgtagttgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgt 4164497  T
Q  216 tttattgctttaatagaaatagg 238  Q
    ||||| |||||||||||||||||    
T  4164498 tttatcgctttaatagaaatagg 4164520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 15988571 - 15988427
Alignment:
Q  94 tattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctta 193  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||     |||||||| | ||||||||||||||||||||||||     
T  15988571 tattttggagatgtatgatatatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttattgaagacgtagcgtctatttcttg 15988472  T
Q  194 aatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    ||||  | | |||| || ||||||||| |||| ||||||||||||    
T  15988471 aataaatgttttattcgcgtgttttatcgcttaaatagaaatagg 15988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 11517518 - 11517734
Alignment:
Q  31 tttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg-gagatgtatgatttatatccgctgcgact 129  Q
    |||| |||| |||||||| ||||||| ||| ||||||||||||| ||||||| ||| ||||||||||||  |||||||||||||| |||| | || |  |    
T  11517518 tttgcccatatgtcgggacttggagatttt-tatgatgatgtatattgatcttatgacatgtatatttttagagatgtatgatttttatctgttgtgttt 11517616  T
Q  130 gttgaagatttttatatatgcatacatgtttggtttctgttg--aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgcttta 227  Q
    ||||| || |||||||||||||||  ||||||  || || ||  |||| ||| |||||||||||| |||||||||||||| || |||| |||| ||||||    
T  11517617 gttgaggaattttatatatgcatat-tgtttgaattttgatgtgaagatgtatcgtctatttcttgaatatttatattattcgcgtgtattatcgcttta 11517715  T
Q  228 atagaaatagggcgttaca 246  Q
    ||||||||| |||||||||    
T  11517716 atagaaatatggcgttaca 11517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 151
Target Start/End: Original strand, 25106389 - 25106524
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||||||| ||| || | |||||| ||||||| ||||| |  ||||| || ||||||| |||  |||||||||||||||||||||||||    
T  25106389 atttatgttgttgagattttgcctatgtatcgggacttggagattttatgt--tgatgcatattgatcttatgatatgtatattttggagatgtatgatt 25106486  T
Q  114 tatatccgctgcgactgttgaagatttttatatatgca 151  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  25106487 tatatccgctgcgactgttgaaattttttatatatgca 25106524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14967970 - 14967728
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccat-ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatatttt 99  Q
    |||||| |||||| || |||||||| |||||||  |||  ||||||||||||| ||| |||||||| |||||||| ||||| | ||| ||||||||||||    
T  14967970 tttattttggattgatctatgttgttgagattttaccaacttgtcgggatttgaagattttatatggtgatgtatattgattttatgacatgtatatttt 14967871  T
Q  100 --ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaata 197  Q
      | ||||||||| | |||||||||||||||||||||  | |||||||||||    ||||||||||   | | || ||||||   |||||||||| ||||    
T  14967870 ttgaagatgtatgttatatatccgctgcgactgttgagaaattttatatatg----catgtttggtgaatttggacgacgtaaattctatttcttgaata 14967775  T
Q  198 tttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||| | |||| | ||||||||||  ||||||||||| || |||||||    
T  14967774 tttgttttattcatgtgttttatcactttaatagaagtaaggcgtta 14967728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 33371411 - 33371608
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||| |||||||||  | ||||||||||| ||| |||| || |||||| |||||||||||| ||||| || ||||  |||| || | |    
T  33371411 tggatttattcatgtt-tggagatttaccaatttgtcgggacttgaagaacttttatgattatgtattttgatatcatgacaggtatgctttgaag-tat 33371508  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || |||| |  |||||| ||||||||||| ||||||||||||||    
T  33371509 atggtttatatccgctgcgactgttgagaatttttatacatgcatgttgttttggattttgttaattacgtagtgtctatttcttgaatatttatattat 33371608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 38378373 - 38378452
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| || ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  38378373 tgttgatgatgtaacgtctatttcttaaatatttatattattcgtgtgttttatcgctttaatagaaatagggtgttaca 38378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 34557995 - 34557759
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| || ||||| || |||| ||||||| ||||||  |||||||||||||  |||| || |     
T  34557995 tggatttattcatgttg--gagatttacccatttgtcgggactttgagaacttttatgttgatgtatttttgacatcatggcatgtatgctttgaag-ta 34557899  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||| |||||||| | ||||||||||| ||||||||||| ||||||     ||||| |||   |||| |||||| |||||||||||| ||||| | ||||    
T  34557898 tatggtttatatctgttgcgactgttg-agatttttatacatgcatgttgttttggattttatttgatgacgtatcgtctatttcttgaatatatgtatt 34557800  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || ||||||||| | ||||||||||||||| |||||||    
T  34557799 attcgcgtgttttatcgttttaatagaaataggacgttaca 34557759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 12019886 - 12019814
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||| | |||||| || |||||||| ||||||||||||||||||||||||||    
T  12019886 gacgtagcgtctatttcttaaatatctgtattattcgcgtgttttactgctttaatagaaatagggcgttaca 12019814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 4147746 - 4147935
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  ||||| |||||||||||| ||||| |||||||| ||| ||  | |||| ||||    
T  4147746 ttatgttttggagatttacccaattgtcgggatttcggagaattttgatgataatgtattttgatatcatgacatgtatacttttgaattttatggttta 4147845  T
Q  116 tatccgctgcgactgttgaagatttttatatatgcatacatg----tttggtttctgttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||||||||| | ||||||  |||||| ||||  ||| ||||    ||||| || |||||| ||||| ||||||||||||| ||||||||||    
T  4147846 tatccgctgcaattgttgagaatttttttata--catgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaatatttata 4147935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 14890019 - 14889902
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    |||| ||||||| |||||||| ||||||||| ||| |||||||||| |||||||| ||||| |   ||||||| ||||||| ||| |||||||| |||||    
T  14890019 tattatggatttttttatgttatggagattttgcccatttgtcgggttttggagattttatttatggatgtatattgatcttatgacatgtatactttgg 14889920  T
Q  102 agatgtatgatttatatc 119  Q
     |||||||||||||||||    
T  14889919 tgatgtatgatttatatc 14889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 38815672 - 38815743
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||| |||||||||    
T  38815672 acgtagcgtctatttcttgaatattattattattcgtgtgttttatcgctttaatagaaataaggcgttaca 38815743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 25607602 - 25607670
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||||| |||||| ||  |||||||||||||||| |||||||||||||||||    
T  25607602 gtagcgtctatttcttgaatattt-tattattcgcatgttttattgctttaagagaaatagggcgttaca 25607670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 20418868 - 20418776
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgac 128  Q
    |||| |||||||||||||||| ||||| || ||||||||| |||  | ||| |||| |||||||||||||||||| | | |||||||||||||    
T  20418868 ccatatgtcgggatttggagattttatgtggtgatgtattatgagtttatgacatgaatattttggagatgtatgttatttatccgctgcgac 20418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 11884432 - 11884511
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| |||| | |||||||||| ||||| | ||||||  | ||||||||| |||||||||||||||||||||||||||    
T  11884432 ttgaagtcgtatcatctatttcttgaatatatttattatttgcgtgttttatcgctttaatagaaatagggcgttacatt 11884511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 14286967 - 14286896
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  14286967 acgtagcgtctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttaca 14286896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 14820029 - 14820108
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||| | |||||||||| |||||||||||||| || ||||||||| ||||||||| ||| || ||||||||    
T  14820029 tgttgatgacgtaacttctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaaaagagcgttaca 14820108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 23888374 - 23888441
Alignment:
Q  179 agcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||    
T  23888374 agcgtctatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 23888441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 25769245 - 25769107
Alignment:
Q  109 tgatttatatccgctgcgactgttgaagatttttatatatgcatacat-gtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||     |||||  || ||| ||| |||||||| |||||||||| ||||  | |||||    
T  25769245 tgatttatatccgctgcgactgttgaa-atttttatgcatgcatgttgagtttgaattttgtatgatgacgtagcatctatttcttgaataaatgtatta 25769147  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | ||  ||||||||||||||||||||||||||| ||||||    
T  25769146 ttcgcatgttttattgctttaatagaaatagggtgttaca 25769107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 11988401 - 11988470
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||    
T  11988401 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 11988470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 39653800 - 39653731
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||||| |   |||| || | ||||||| |||||||||||||||||||||||||    
T  39653800 gtagcgtctatttcttaaatatatgctttattcgcgagttttatcgctttaatagaaatagggcgttaca 39653731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 13330815 - 13330743
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| || ||||| | |||||| || ||||||||| |||||||||||| ||||||||||||    
T  13330815 gacgtaacgtctattttttgaatatatttattattcgcgtgttttatcgctttaatagaagtagggcgttaca 13330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 18009324 - 18009396
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| |  ||||| ||||| |||||| |||||||||||| ||||| ||||||    
T  18009324 gacgtagcgtctatttcttgaatatattcattattcgtgtattttatcgctttaatagaagtagggtgttaca 18009396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 12490973 - 12491107
Alignment:
Q  112 tttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccg 210  Q
    ||||||||||||||||||||||| |||||||||  ||||||      ||| ||| ||| ||| ||| ||||||||||||||| ||||  | |||||| |     
T  12490973 tttatatccgctgcgactgttga-gatttttatgcatgcatgtgaaattgatttttgtatgatgacatagcgtctatttcttgaataaatgtattattca 12491071  T
Q  211 tgtgttttattgctttaatagaaatagggcgttaca 246  Q
      ||||||||||||||||||||||||||| ||||||    
T  12491072 catgttttattgctttaatagaaatagggtgttaca 12491107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 20418737 - 20418658
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||||||  |||||||||||| ||||||| |||||| || ||||||| | ||||||||| || |||| |||||||||    
T  20418737 ttgaagacgtgacgtctatttcttgaatatttttattattcgcgtgttttgtcgctttaataaaagtaggacgttacatt 20418658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 239
Target Start/End: Original strand, 14061399 - 14061532
Alignment:
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatac-atgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||| ||||||||||||||||||||||| |||||||||  ||||||   |  ||||  || ||| ||| |||||||| |||||||||| ||||  | |||    
T  14061399 tatggtttatatccgctgcgactgttga-gatttttatgcatgcatgttaaatttgaattttgtatgatgacgtagcatctatttcttgaataaatgtat 14061497  T
Q  205 tatccgtgtgttttattgctttaatagaaataggg 239  Q
    ||| ||  |||||||||||||||||||||||||||    
T  14061498 tattcgcatgttttattgctttaatagaaataggg 14061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 24902105 - 24902167
Alignment:
Q  185 tatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||||||||| |||||| || ||||||||| ||||||||||||  | ||||||||||    
T  24902105 tatttcttaaatatttgtattattcgcgtgttttatcgctttaatagaagcatggcgttacat 24902167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 14283228 - 14283159
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  14283228 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaattagggcgttaca 14283159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 15548475 - 15548398
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||||||||||||||||||| ||||| |   |||| || ||||||||| || |||||||||||| |||||||||    
T  15548475 ttgatgacgtagcgtctatttcttgaatatatgccttattcgcgtgttttatcgcattaatagaaataaggcgttaca 15548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 11199783 - 11199847
Alignment:
Q  184 ctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||||| ||||  |||||||| ||  |||||| |||||||||||||||||||| ||||||||    
T  11199783 ctatttcttgaataaatatattattcgcatgtttttttgctttaatagaaatagggtgttacatt 11199847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 51160689 - 51160760
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||| |||||||||| |||| || |||||| ||  ||||| |||||||||||||||||||| ||||||||    
T  51160689 cgtagcctctatttcttgaataattgtattattcgcatgtttaattgctttaatagaaataggagcgttaca 51160760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 16818681 - 16818611
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  16818681 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 16818611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 51963488 - 51963542
Alignment:
Q  184 ctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||    
T  51963488 ctatttcttgaatattattattattcgcatgttttattgctttaatagaaatagg 51963542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 35490628 - 35490697
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  35490628 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 35490697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 54686130 - 54686061
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| || |||||||||    
T  54686130 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtatggcgttaca 54686061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 15874156 - 15874084
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| |   |||| || | ||||||| ||||||||| |||||||| ||||||    
T  15874156 gacgtagcgtctatttcttgaatatatgctttattcgcgagttttatcgctttaataaaaatagggtgttaca 15874084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 30140617 - 30140557
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    |||||| |||||||||| ||||  | |||||| ||| ||||| ||||||||||||||||||    
T  30140617 cgtagcctctatttcttgaataaatgtattattcgtatgtttaattgctttaatagaaata 30140557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 30204341 - 30204269
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||| ||| |  ||||| | ||| ||||||  ||||||||||| ||||||||||||    
T  30204341 gacgtagcatctatttcttaattatatcgattattcatgtattttatcactttaatagaagtagggcgttaca 30204269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 47787093 - 47787165
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||| ||||||||||| ||||||    
T  47787093 gacgtagcatctatttcttgaataaatgtattattcgcatgtttaattgctttattagaaatagggtgttaca 47787165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 48419605 - 48419533
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||  | | |||| |||  ||||||| | ||||||||||||||| |||||||    
T  48419605 gacgtagcgtctatttcttgaataaatgttttattcgtaagttttatcgttttaatagaaataggacgttaca 48419533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17948065 - 17948309
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||     
T  17948065 tttattctggatttatttatgttgttgagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttgatctcatgtcatgtatactttt 17948164  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| ||||||||||||||||||||| ||||||||  ||||||||||||||||   ||||||| || |||||| || |||||||||||||||| |||||||    
T  17948165 gaggtgtatgatttatatccgctgcaactgttgagaatttttatatatgcat-gttgtttggattttgttgatgatgtagcgtctatttcttgaatattt 17948263  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| |||||||||||||||| ||||||||    
T  17948264 atattattcgcgtgttttatcgctttaatagaaatagtgcgttaca 17948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9641186 - 9640942
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||    
T  9641186 tttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttg 9641087  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||| |   ||||||| || |||||| ||||||||||| ||||||| |||||||    
T  9641086 gagatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtcgatttcttgaatattt 9640988  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || || ||||||||| ||||||| |||||||||||||||||    
T  9640987 atatgattcgcgtgttttatcgctttaaaagaaatagggcgttaca 9640942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 39294226 - 39294436
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||     
T  39294226 ccatatgtcggtacttgaagaatttatatgatgatgtattttgatctcatggcatgtatactttggatatgtatgatttatatccgctgcgactgttgag 39294325  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     ||||||||||||||||     |||| ||| | ||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||    
T  39294326 aatttttatatatgcatgttgatttgatttttattgtagacgtagcgtctatttcttgaatatttatattattcgtgtgttttatcgctttattagaaat 39294425  T
Q  236 agggcgttaca 246  Q
    |||||||||||    
T  39294426 agggcgttaca 39294436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 12245822 - 12245586
Alignment:
Q  6 tctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 104  Q
    |||||||||||||||||| ||||||||| ||| || |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  12245822 tctggatttatttatgttatggagattttgcccatatgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggaga 12245723  T
Q  105 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 204  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||   |||||| | | ||||||||||||| ||||||||| || ||||  | | |    
T  12245722 tgtatgatttatatccgctgcgactgttgagaaattttatatatgcat-gttgtttgatatttgttgaagacgtaacgtctatttattgaataaatgttt 12245624  T
Q  205 tatccgtgtgttttattgctttaatagaaatagggcgt 242  Q
    ||| || |||||||||||||||||||||||||||||||    
T  12245623 tattcgcgtgttttattgctttaatagaaatagggcgt 12245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 9323097 - 9323341
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||| |||     
T  9323097 tttattgtggatttatttatgttgtggagattttcccatttgtcgggatttgaataatttttatgttgatgtattttgatctcatggcatgtatactttt 9323196  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    ||| |||||| |||||||||||||| ||||||||  |||||||||||||  | |||| ||| |||  |||||| ||||||||||||||||||| ||||||    
T  9323197 gaggtgtatggtttatatccgctgcaactgttgataatttttatatatgtct-catgattttgttattgttgatgacgtagcgtctatttcttgaatatt 9323295  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     | ||||| || ||||||||| ||||||||| |||||||||||||||    
T  9323296 ca-attattcgcgtgttttatcgctttaataaaaatagggcgttaca 9323341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 3194060 - 3194305
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    ||||||||||||||||||||| |||||||||  | ||||||||||| |||||||| ||||| |   ||||||| ||||||| ||| ||||||||  ||||    
T  3194060 tattctggatttatttatgttatggagatttcactcatttgtcgggttttggagattttatttatggatgtatgttgatcttatgacatgtatacattgg 3194159  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 201  Q
     ||| ||||||||||||| | ||||||||||||  ||||||||| ||||||   |||||| | | ||||||| ||||||||||||||| || |||||||     
T  3194160 tgatatatgatttatatctggtgcgactgttgagaatttttataaatgcatgt-tgtttgatatttgttgaaaacgtagcgtctattttttgaatatttg 3194258  T
Q  202 tattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||    
T  3194259 tattattcgcgtgttttatcgctttaatagaaatagggcgttacatt 3194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 18081378 - 18081581
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |  | ||||||||||||| |||||||||||| ||| ||| ||| ||    
T  18081378 tgtcgggatttggagaatttatatgatgttgtattttgatctcatggcatgtagacctaggagatgtatgatctatatccgctgcaactattg-agaatt 18081476  T
Q  141 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggc 240  Q
    |||||||| |||   ||||||| || |||||| ||||||| ||| ||||||| |||||||||||||| || ||||||||| ||||||||||||||| | |    
T  18081477 ttatatatacat-gttgtttggattttgttgatgacgtagagtcaatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaataagac 18081575  T
Q  241 gttaca 246  Q
    ||||||    
T  18081576 gttaca 18081581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 31499375 - 31499135
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||||||| |||| |||| ||||||||| ||||| |||| ||| ||| ||| |||    
T  31499375 tggatttatttatgttgtggagatttacccaattgtcgggattttgagaatttttatgttgatatattttgatatcatgacatgcatacttttgaggtgt 31499276  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    ||||||||||||||||||||||||| |  ||||||||| ||||||     ||||| || ||  |||| ||  |  |||||||||||| ||||||||||||    
T  31499275 atgatttatatccgctgcgactgttaagaatttttatacatgcatgttattttggattttgaattgatgatatgacgtctatttcttgaatatttatatt 31499176  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || ||||||||| |||||||||||| ||||||||||||    
T  31499175 attcgcgtgttttatcgctttaatagaagtagggcgttaca 31499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 21677588 - 21677779
Alignment:
Q  52 ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgca 151  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| || |||||| |||||||||||||| ||||||||  ||| ||||||||||     
T  21677588 ggagaatttctatgatgatgtattt-gatctcatggcatgtatactttg-aggtgtatggtttatatccgctgcaactgttgagaattcttatatatgcc 21677685  T
Q  152 tacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |  || ||||| || |||||| | ||| ||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  21677686 tg-atatttggattttgttgatggcgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 21677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4482402 - 4482158
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||  | ||||||||||| |||||||||||||||||||||| || ||||||| ||||| ||||| |||||||||||||  |||     
T  4482402 tttattttggatttatttacat-gtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttgatttcatggcatgtatgctttt 4482304  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
     |  | |||| |||||||||||||| |||||||||  |||||||| ||||||     ||||| || |||||| || || |||||||||| || |||||||    
T  4482303 aaagtatatggtttatatccgctgcaactgttgaaattttttatacatgcatgttgttttggattttgttgatgatgtggcgtctattttttgaatattt 4482204  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||    
T  4482203 atattattcgtgtgttttaccgctttaatagaaataaggcgttaca 4482158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 17923086 - 17922970
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17923086 ccatatgtcaggatttggagaatttatatgatgatgtattttgatctcatgacatgtatactttagagatgtatgatttatatccgctgcgactgttgaa 17922987  T
Q  136 gatttttatatatgcat 152  Q
     ||||||||| ||||||    
T  17922986 aatttttatacatgcat 17922970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 15980553 - 15980795
Alignment:
Q  2 ttattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||| |||||||||||||||||||||||  || || |||||||||||| ||| ||||||||  ||||||| ||| |||  || |||||||||||||    
T  15980553 ttattctgaatttatttatgttgtggagattttacccatatgtcgggatttgaagattttatatgtcgatgtatattgttctt-tgacatgtatattttg 15980651  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggt-ttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
     |||||||||||||||||||||||||||||||||  | ||||||||||||||   | |||| | || |||| ||||||||||||||||||||| ||||      
T  15980652 -agatgtatgatttatatccgctgcgactgttgagaaattttatatatgcat--gtttttgatgttttgttcaagacgtagcgtctatttcttgaataaa 15980748  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |   |||| || |||| |||| |||||||||||||||||||||||||    
T  15980749 tgctttattcgcgtgtattatcgctttaatagaaatagggcgttaca 15980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 14938836 - 14938598
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||  |||||||||| ||| |||| ||||||  |||||||| |||  |||  |||||| || |||||||||||||| ||| |||||||    
T  14938836 tggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggcatgtatacttttgagatgt 14938737  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||||| | ||| ||||||||||||||   ||||||||| ||||||     ||||  || |||||| |||||  |  ||||||||||||||||||||||||    
T  14938736 atgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatttcttaaatatttatattat 14938637  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || ||||||||| |||||||||||||||||||||||||    
T  14938636 tcgcgtgttttatcgctttaatagaaatagggcgttaca 14938598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 15366429 - 15366191
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||  |||||||||| ||| |||| ||||||  |||||||| |||  |||  |||||| || |||||||||||||| ||| |||||||    
T  15366429 tggatttatttatgtgttggagatttgcccacttgttgggattcagagaatttttatattgagatatttttatatcatggcatgtatacttttgagatgt 15366330  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||||| | ||| ||||||||||||||   ||||||||| ||||||     ||||  || |||||| |||||  |  ||||||||||||||||||||||||    
T  15366329 atgatctttattcgctgcgactgttgggaatttttatacatgcatgttgttttgaattttgttgatgacgtgactactatttcttaaatatttatattat 15366230  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || ||||||||| |||||||||||||||||||||||||    
T  15366229 tcgcgtgttttatcgctttaatagaaatagggcgttaca 15366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 246
Target Start/End: Complemental strand, 28388548 - 28388355
Alignment:
Q  50 ttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatg 149  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| | | ||| ||||||||||||||||||||| ||| ||||  ||||||||| |||    
T  28388548 ttggagaattt-tatgatgatgtattc-gatctcatggcatgtatactcttgaggtgtatgatttatatccgctgcaactattgagaatttttatagatg 28388451  T
Q  150 catacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||    ||||| || |||||| ||||| ||||||||||||| |||| ||||||||| || ||||||||| ||||||||||||||||| |||||||    
T  28388450 catattattttggattttgttgaggacgtggcgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaataggacgttaca 28388355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 16381984 - 16381803
Alignment:
Q  63 atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg 162  Q
    |||| |||||||||||||||||||||||||||| |||| || |||||| ||||||||| |||| ||||||||| | |||| ||||||| |   |||||||    
T  16381984 atgacgatgtattttgatctcatggcatgtatactttgaag-tgtatggtttatatccactgcaactgttgaaaaattttctatatgcctgt-tgtttgg 16381887  T
Q  163 tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || ||||||  ||||  | ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||||||    
T  16381886 attttgttgataacgtgacatctatttcttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggtgttaca 16381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 48345714 - 48345478
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || || | ||||||||||| ||| ||||| |||||||  |||| || |     
T  48345714 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttaagttgatgtatttttgatatcatgacatgtatgctttgaag-ta 48345618  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||     ||||| || |||| || | ||||||||||||||||| ||||| | ||||    
T  48345617 tatggtttatatccgctgcgactgttga-gatttttatacatgcatgttgttttggattttgtttgatggcgtagcgtctatttcttgaatatatgtatt 48345519  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||  ||||||||||| |||||||||||||||||||||||||    
T  48345518 atttgtgtgttttatcgctttaatagaaatagggcgttaca 48345478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 9058691 - 9058903
Alignment:
Q  36 ccatttgtcgggatttgg-agaatttat-atgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgtt 132  Q
    ||||||||||||| |||| ||||||| | ||| | ||||||||| ||| ||||||||||||| ||||| || | |||| |||||||||| ||||||||||    
T  9058691 ccatttgtcgggacttgggagaattttttatgtttatgtatttttgatatcatggcatgtatgttttgaag-tatatggtttatatccgatgcgactgtt 9058789  T
Q  133 gaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    || || ||||||| ||||||     ||||| || ||| ||||||||||||||||||||||||||||| |||||||| || |||||| || ||||||||||    
T  9058790 ga-gaattttatacatgcatgttgttttggattttgtatgaagacgtagcgtctatttcttaaatatatatattattcgcgtgtttgatcgctttaatag 9058888  T
Q  232 aaatagggcgttaca 246  Q
    |||||||||||||||    
T  9058889 aaatagggcgttaca 9058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 14278946 - 14279188
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttg-atctcatggcatgtatattttgg 101  Q
    |||| |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| |||||||||||  || |||||||||||||  ||||     
T  14278946 tattttggatttattcatgttg--gagatttacccatttgtcgggacttggagaactt-tatgttgatgtattttttatatcatggcatgtatggtttga 14279042  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa-gacgtagcgtctatttcttaaatattt 200  Q
    || | |||| |||||||||||||||||||||| |||||||| || ||||||     ||||| || |||| || ||||||||||||||||||| ||||| |    
T  14279043 ag-tatatggtttatatccgctgcgactgttg-agatttttgtacatgcatgttgttttggattttgtttaatgacgtagcgtctatttcttgaatatat 14279140  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
     |||||| || |||||||||  |||||||||||||||| |||||||||    
T  14279141 gtattattcgcgtgttttatcactttaatagaaataggacgttacatt 14279188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 246
Target Start/End: Complemental strand, 4444385 - 4444176
Alignment:
Q  40 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatt 139  Q
    ||||||||||||| |||||||  |||||| ||| || |||| | |||||||||||||||  ||| |||||  |||||||| ||||| ||||||||  |||    
T  4444385 ttgtcgggatttgaagaattttcatgatgttgttttatgatattatggcatgtatatttgtgaggtgtatcgtttatatctgctgcaactgttgagaatt 4444286  T
Q  140 ----tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
        ||||||||||| | | ||||||  || |||||  ||||||||||||||||||| |||||||||||||| || |||||| ||  |||||||||||||    
T  4444285 attatttatatatgcttgc-tgtttgaattttgttgttgacgtagcgtctatttcttgaatatttatattattcgcgtgtttaatctctttaatagaaat 4444187  T
Q  236 agggcgttaca 246  Q
    |||||||||||    
T  4444186 agggcgttaca 4444176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 17926923 - 17926807
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||| |||||| |||||||||||||||    
T  17926923 ccatatgtcgggattcagagaatttatatgataatgtattttgatctcatgacatatatactttagagatgtatgatgtatatctgctgcgactgttgaa 17926824  T
Q  136 gatttttatatatgcat 152  Q
      |||||||| ||||||    
T  17926823 attttttatacatgcat 17926807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 20587706 - 20587900
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| |||  |||  |||||| || |||||| ||||||| ||| ||| |||||| ||||||| || |||| |||||||  ||||||||| ||    
T  20587706 tttggagaatttttatattgagatatttttatatcatggtatgtatacttttgaggtgtatggtttatattcgttgcgtctgttgagaatttttatacat 20587805  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtt 243  Q
    ||||     ||||| || ||||||||||||   ||||||||||| |||||| ||||||| || ||||||||| ||||||||||||||||||||||    
T  20587806 gcatgttgttttggattttgttgaagacgtgatgtctatttcttgaatattcatattattcgcgtgttttatcgctttaatagaaatagggcgtt 20587900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 34243188 - 34243423
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| |  |||| ||||||| ||||||| ||||||||||| || |||| || |     
T  34243188 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaact--tatgttgatgtatttttgatatcatggcatgtgtactttgaag-ta 34243282  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||||| ||||||||||||| ||||||||||| ||||||   ||  ||||| || || |||| |||||||||||||||||||  |||| | ||    
T  34243283 tatggtttatatctgctgcgactgttg-agatttttatacatgcat-gttgaatttggattttgtttgatgacgtagcgtctatttcttgcatatatgta 34243380  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || ||||||||| |||||||||||||||||| ||||||    
T  34243381 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 34243423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 4437001 - 4436775
Alignment:
Q  22 ttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccg 121  Q
    ||||||||||||  || ||||||||||||||||||||||  |||||| | | || |||||| |||||||||||||||  ||| |||||| |||||||| |    
T  4437001 ttgtggagatttaccc-tttgtcgggatttggagaattttcatgatgttattttatgatcttatggcatgtatatttgtgaggtgtatggtttatatctg 4436903  T
Q  122 ctgcgactgttgaagatt----tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttt 217  Q
     ||| ||||||||  |||    ||||||||||| |   ||||||  || |||||  ||||||||||||||||||| |||||||||| ||| || ||||||    
T  4436902 ttgcaactgttgagaattattatttatatatgcttgt-tgtttgaattttgttgttgacgtagcgtctatttcttgaatatttatactattcgcgtgttt 4436804  T
Q  218 tattgctttaatagaaatagggcgttaca 246  Q
     || ||||||||| |||||||| ||||||    
T  4436803 aatcgctttaataaaaatagggtgttaca 4436775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 18921154 - 18921337
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    ||||||| |||| |||| |||||||||| ||||||||| |||||||| ||| ||| |||||| |||||||||||||||||||||||  |||||||||       
T  18921154 tttggaggattt-tatgttgatgtattt-gatctcatgacatgtataattttgaggtgtatggtttatatccgctgcgactgttgagaatttttata--- 18921248  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     ||| |||||        |||||  | ||| ||||||||||||| |||||||||||||| || ||||||||| ||||||||| ||||||| |||||||    
T  18921249 -catgcatgt--------tgttgttggcgtggcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaataaaaataggacgttaca 18921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 246
Target Start/End: Complemental strand, 28718093 - 28717935
Alignment:
Q  88 catgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctat 187  Q
    |||||||| ||||||| |||||| ||||||||| |||||||||||||  ||||||||| ||||||     ||||| || ||| ||  || | ||||||||    
T  28718093 catgtatactttggaggtgtatggtttatatccactgcgactgttgagaatttttataaatgcatgttgttttggattttgtcgataacatggcgtctat 28717994  T
Q  188 ttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| ||||||||||| || || ||||||||| ||||||||| ||||| |||||||||    
T  28717993 ttcttgaatatttatatcattcgcgtgttttatcgctttaataaaaatatggcgttaca 28717935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 9609371 - 9609134
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||| ||||||||| |||||||| || |||| ||||||| |||| || |||||||||||||  |||| || |     
T  9609371 tggatttattcatgttg--gagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaag-ta 9609275  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||||   ||  ||||| || || |||| || || ||||||||||||| ||||| |       
T  9609274 tatggtttatatccgctgcgactgttg-agatatttatacatgcat-gttgaatttggattttgtttgatgatgtcgcgtctatttcttgaatatatgct 9609177  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |||||||||||| ||||||||||||||||| |||||||    
T  9609176 ttattcgtgtgttttatcgctttaatagaaataggtcgttaca 9609134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 9836943 - 9836706
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||| ||||||||| |||||||| || |||| ||||||| |||| || |||||||||||||  |||| || |     
T  9836943 tggatttattcatgttg--gagatttacccacttgtcgggacttggagaacttttatgttgatgtattttttatatcatggcatgtatgctttgaag-ta 9836847  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||||   ||  ||||| || || |||| || || ||||||||||||| ||||| |       
T  9836846 tatggtttatatccgctgcgactgttg-agatatttatacatgcat-gttgaatttggattttgtttgatgatgtcgcgtctatttcttgaatatatgct 9836749  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |||||||||||| ||||||||||||||||| |||||||    
T  9836748 ttattcgtgtgttttatcgctttaatagaaataggtcgttaca 9836706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12182366 - 12182238
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtat-tttgatctcatggcatgtatattt 98  Q
    |||||| |||||| ||||||||||| |||||||  | || ||||||||| ||||||| |||||||| |||||||| |||||  | ||| |||||||||||    
T  12182366 tttattttggattgatttatgttgttgagattttactcacttgtcgggaattggagattttatatggtgatgtatgtttgagttgatgacatgtatattt 12182267  T
Q  99 tggagatgtatgatttatatccgctgcga 127  Q
    |||||||||||| | ||||||| ||||||    
T  12182266 tggagatgtatgttatatatcctctgcga 12182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 14303049 - 14303128
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| ||||||| |||||||||||| ||||||| |||||| || ||||||||| |||||||||||| ||||||||||||    
T  14303049 tgttggagacgtaacgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttaca 14303128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 16915752 - 16915539
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttg-atctcatggcatgtatattttggagatgtatgatttatat--ccgctgcgactgtt 132  Q
    |||||| |||||| ||||||||  | |||| |||||||||||  || ||||||||||||| ||||| || | |||| |||||||  ||||||||||||||    
T  16915752 ccatttatcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatgttttgaag-tatatggtttatatatccgctgcgactgtt 16915654  T
Q  133 gaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    ||   |||||||| ||||||     ||||| || |||  || ||||||||||||||||||| ||||| | |||||| ||  |||||||  ||||||||||    
T  16915653 gagtttttttatacatgcatgttgttttggattttgtaagatgacgtagcgtctatttcttgaatatatgtattattcgcatgttttaccgctttaatag 16915554  T
Q  232 aaatagggcgttaca 246  Q
    |||||||||||||||    
T  16915553 aaatagggcgttaca 16915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 33558026 - 33557949
Alignment:
Q  10 gatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatgg 87  Q
    ||||||||| ||||||||||||||  |||  |||||||||||||||||||| |||| |||| ||||||||||||||||    
T  33558026 gatttatttttgttgtggagatttacccaaatgtcgggatttggagaatttttatgttgatatattttgatctcatgg 33557949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 5617583 - 5617346
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| ||||||||||| ||| ||||| |||||||  || | || |     
T  5617583 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttatgttgatgtatttttgatatcatgacatgtatgcttcgaag-ta 5617487  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctgtt-gaagacgtagcgtctatttcttaaatatttata 203  Q
    | || |||||||||| |||||||||||| |||||||||  ||||||   ||  ||||  || |||| || || |||||||||||||||| ||||| | ||    
T  5617486 tttggtttatatccgttgcgactgttga-gatttttatgcatgcatgt-tgaatttgaattttgtttgatgatgtagcgtctatttcttgaatatatgta 5617389  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||  | ||||||||  |||||||||||||||||||||||||    
T  5617388 ttattagcgtgttttaccgctttaatagaaatagggcgttaca 5617346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 12182194 - 12182130
Alignment:
Q  182 gtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||||| |||||||    
T  12182194 gtctatttcttgaatatttgtattattcgtgtgttttatcgctttaatagaaataggacgttaca 12182130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 33555728 - 33555565
Alignment:
Q  83 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtag 180  Q
    ||||||||||||| ||| ||| |||||| |||||| ||||||||||||||||   ||||||||||||| |   ||||| | || ||  | || ||||| |    
T  33555728 catggcatgtatacttttgaggtgtatggtttatacccgctgcgactgttgagagtttttatatatgcct-gttgttttgattttgaatcgatgacgtgg 33555630  T
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     ||||||||||| |||||||||||||| || || |||||| || |||||||||||| |||||||||    
T  33555629 tgtctatttcttgaatatttatattattcgcgttttttatcgc-ttaatagaaataaggcgttaca 33555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 18366222 - 18366299
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||  |||||||||||| ||||||| |||||| || ||||||||| ||||| |||||| ||||||||||||    
T  18366222 ttgaagacgtgacgtctatttcttgaatatttgtattattcgcgtgttttatcgctttgatagaagtagggcgttaca 18366299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 13460406 - 13460352
Alignment:
Q  98 ttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 152  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  13460406 ttggtgatgtatgatttatatccgctgcgactgttgagaatttttataaatgcat 13460352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 16930024 - 16930133
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  |||||| |||||| |||||||| || |||| ||||||| ||||||| |||||||||||||  |||| || | |||| ||||||| ||||    
T  16930024 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaag-tatatggtttatatacgct 16930122  T
Q  124 gcgactgttga 134  Q
    |||||||||||    
T  16930123 gcgactgttga 16930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 16935407 - 16935516
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  |||||| |||||| |||||||| || |||| ||||||| ||||||| |||||||||||||  |||| || | |||| ||||||| ||||    
T  16935407 tggagatttacccatttttcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatgctttgaag-tatatggtttatatacgct 16935505  T
Q  124 gcgactgttga 134  Q
    |||||||||||    
T  16935506 gcgactgttga 16935516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 15687519 - 15687451
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| | ||||| |||||| ||  |||||||||| |||||||||||||||||||||||    
T  15687519 gtagcgtctatttcttgattattt-tattattcgcatgttttattggtttaatagaaatagggcgttaca 15687451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 19380917 - 19380852
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||||| |||||| ||  |||||||| |||||||||||| ||||||||||||    
T  19380917 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttaca 19380852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 4073069 - 4073159
Alignment:
Q  43 tcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||||||||||||| ||||||||||||||||| || || | ||| ||| |||||||||  ||| ||||| ||||||||| |||||| |||||    
T  4073069 tcgggatttggagattttatatgatgatgtatattaattttatgccatatatattttgatgatatatgacttatatccg-tgcgaccgttga 4073159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 25122139 - 25122068
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| ||||||||| ||||||  |||||| |   |||||||||| |||||||||||||||||||||||||    
T  25122139 gtagcgactatttcttgaatattattattattcacatgttttattgatttaatagaaatagggcgttacatt 25122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 47483161 - 47483231
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||| ||||||||||||||| |  ||||| ||  ||||| ||||||||||||||||||||| |||||||    
T  47483161 gtagcgactatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttacat 47483231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 10002718 - 10002787
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||||||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  10002718 gtagcatctatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 10002787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 13319222 - 13319153
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| |||| |||||||||||||||||||||||    
T  13319222 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgttttaatagaaatagggcgttaca 13319153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 15305542 - 15305426
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| |||||| ||||||||| |||||||| ||| |||| | |||| | ||   |||||||||||||||||||||| | |||||||||||||| | ||||    
T  15305542 ccatatgtcggaatttggagattttatatggtgacgtatgtatgattttataaaatgtatattttggagatgtatgttatatatccgctgcgatttttga 15305443  T
Q  135 agatttttatatatgcat 152  Q
     || |||| |||||||||    
T  15305442 ggaatttt-tatatgcat 15305426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 15762806 - 15762875
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  15762806 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtagggcgttaca 15762875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 16206018 - 16205941
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||| | |||||||||| ||||||| |||||| |  ||||||||| |||| ||||||| ||||||| ||||    
T  16206018 ttgaagacgtaacatctatttcttgaatatttgtattattcacgtgttttatcgcttcaatagaagtagggcggtaca 16205941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 3135120 - 3135056
Alignment:
Q  182 gtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||| |||| || |||||| || ||||||||| ||||||||| || ||||||||||||    
T  3135120 gtctatttcttgaataattgtattattcgcgtgttttatcgctttaataaaagtagggcgttaca 3135056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 13272871 - 13272799
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| |   ||||||||||||||||||||||||||| ||||||    
T  13272871 gacgtagcatctatttcttgaataaatgtattattcacatgttttattgctttaatagaaatagggtgttaca 13272799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 15628610 - 15628538
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | ||||||  |  ||||||||||||||||||||||||||| ||||||    
T  15628610 gacgtagcatctatttcttgaataaatgtattatttgcatgttttattgctttaatagaaatagggtgttaca 15628538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 12250299 - 12250370
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| |||||||||| ||||  | |||||| |   ||||||||||||||||||||||||||| ||||||    
T  12250299 acgtagcatctatttcttgaataaatgtattattcacatgttttattgctttaatagaaatagggtgttaca 12250370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 15953819 - 15953890
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttac 245  Q
    ||||||||||||||||||| ||||| |   |||| |||| ||||||| ||||||||||||||| || |||||    
T  15953819 gacgtagcgtctatttcttgaatatatgctttattcgtgagttttatcgctttaatagaaataaggtgttac 15953890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 16481170 - 16481241
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| |||||||||||||    
T  16481170 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttacat 16481241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 17926768 - 17926734
Alignment:
Q  212 gtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||| |||||||||||||||||||||||||    
T  17926768 gtgttttatcgctttaatagaaatagggcgttaca 17926734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 3047700 - 3047631
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  |||||  |  ||||| ||||||||||||||||||||| ||||||    
T  3047700 gtagcgtctatttcttgaatatatgaattatttgcatgtttaattgctttaatagaaatagggtgttaca 3047631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 7290544 - 7290471
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttacatt 248  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| |||||||||||||||||||| ||||||||||    
T  7290544 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaataggagcgttacatt 7290471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 15305400 - 15305335
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||| | |||||||   |||| || ||||||||| |||||||||||| ||||||||||||    
T  15305400 cgtctatttcatgaatatttgatttattcgcgtgttttatcgctttaatagaagtagggcgttaca 15305335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 16574757 - 16574790
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  16574757 tgttttattgctttaatagaaatagggtgttaca 16574790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 16590905 - 16590872
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  16590905 tgttttattgctttaatagaaatagggtgttaca 16590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 49050121 - 49050154
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  49050121 tgttttattgctttaatagaaatagggtgttaca 49050154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 12752818 - 12752754
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  12752818 gacgtagcatctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 12752754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 16209646 - 16209586
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||| |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||    
T  16209646 tagcctctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagg 16209586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 16370421 - 16370457
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtatttt 77  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  16370421 tgtcgggatttggagattttatatgatgatgtttttt 16370457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 17230319 - 17230391
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| |   |||| ||  |||||||  ||||||||||||||| |||||||||    
T  17230319 gacgtagcgtctatttcttgaatatatgctttattcgcatgttttaccgctttaatagaaatatggcgttaca 17230391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 8e-77; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13596059 - 13596303
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||    
T  13596059 tttattctggatttatttatgttgtggagatttgcccatttatcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtagactttg 13596158  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||||| |   ||||||| || |||||| ||||||||||| ||||||| |||||||    
T  13596159 gagatgtatgatctatatccgatgcaactgttgaaaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtcgatttcttgaatattt 13596257  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || || ||||||||| ||||||| |||||||||||||||||    
T  13596258 atatgattcgcgtgttttatcgctttaaaagaaatagggcgttaca 13596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 47470372 - 47470618
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttat-atgatgatgtattttgatctcatggcatgtatatttt 99  Q
    |||| ||||||||||||||||||||||||||||  |||||||||| |||||||||||||| | |||||||||||||||||| ||||| |||||||| |||    
T  47470372 tttactctggatttatttatgttgtggagattttcccatttgtcgagatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttt 47470471  T
Q  100 ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
     ||| |||||| |||||||||||||||||||||||  ||||||||||||||||     |||||||| |||||| ||||| ||||||||||||| ||||||    
T  47470472 tgaggtgtatggtttatatccgctgcgactgttgagaatttttatatatgcatgttgatttggtttttgttgatgacgtggcgtctatttcttgaatatt 47470571  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| || |||||||||  |||||||||||||| |||||||||    
T  47470572 tatattattcgcgtgttttatcactttaatagaaatatggcgttaca 47470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 19624085 - 19624317
Alignment:
Q  15 atttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattt 114  Q
    ||||||||| |||||||||  |||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  19624085 atttatgttatggagattttaccatatgtcgggatttggagattttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgattt 19624184  T
Q  115 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    |||||| ||||||||||||| || ||||||||||||||   ||||||  || ||   ||||||||||||||||||||||| ||||||||| |||| ||||    
T  19624185 atatccactgcgactgttgatgaattttatatatgcat-gttgtttgaattttgatgtgaagacgtagcgtctatttcttgaatatttatgttattcgtg 19624283  T
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||| |||| |||||||||||||||||||||||||    
T  19624284 tgtattatcgctttaatagaaatagggcgttaca 19624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 41919288 - 41919529
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||| ||||||||||||||||| ||||||| ||| ||| |||||||||    
T  41919288 tttattctggatttatttatgttgtggatatttgcccatttgtcgggattttaagattttatatgatgatgtatattgatcttatgacatctatattttg 41919387  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| ||||||| |||| ||| ||| ||| |||||||||||| |   ||||||| || |||||| |||||||| |||||||||| |||||||    
T  41919388 gagatgtatgatctatatccactgcaacttttg-agaattttatatatgcct-gttgtttggattttgttgatgacgtagcatctatttcttgaatattt 41919485  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||| || ||||||||| |||||||||||||||||| ||||    
T  41919486 atattattcgcgtgttttatcgctttaatagaaatagggtgtta 41919529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 50224195 - 50224441
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||     
T  50224195 tttattctgaatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgttgatgtattttgatctcatggtatgtatactttt 50224294  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg-tttggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    ||| |||||  |||||||||||||| ||||||||  |||| ||||||||| |  ||| ||| |||   ||||| ||||| ||||||||||||| ||||||    
T  50224295 gaggtgtattgtttatatccgctgcaactgttgagaatttatatatatgc-ttgatgatttcgttatagttgacgacgtggcgtctatttcttgaatatt 50224393  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    | |||||| || ||||||||| ||||||||||||||||||||||||||    
T  50224394 tttattattcgcgtgttttatcgctttaatagaaatagggcgttacat 50224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 5373190 - 5373399
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||     
T  5373190 ccatatgttgggatttggagaatttatatgatgatgtattttgatctcatgacatgtatattttggagaagtatgatttatatccgctgcgaccgttgag 5373289  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     ||||||||||||||||  ||||||||||| ||||||||||||||||||| ||| || ||||| |   |||| || || |||||| ||||||||||||||    
T  5373290 aatttttatatatgcatgtatgtttggttt-tgttgaagacgtagcgtctgttttttgaatatatgctttattcgcgtattttatcgctttaatagaaat 5373388  T
Q  236 agggcgttaca 246  Q
    | || ||||||    
T  5373389 atggtgttaca 5373399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19557465 - 19557221
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||| || |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||     
T  19557465 tttattctggatttatttctgatgtggagatttacccattttttgggatttggagaatttttatgatgatgtattttgatctcatagcatgtatacttt- 19557367  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||| |||||||||||||| | ||||| ||| |||||| ||||| |   ||||| | || |||||| ||| | ||||||||||||| |||||||    
T  19557366 gaggtgtatggtttatatccgctgcaattgttg-agaattttatgtatgcct-gttgtttagattttgttgatgacatggcgtctatttcttgaatattt 19557269  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||||    
T  19557268 atattattcatgtgttttatcgctttaatagaaatagggcgttacatt 19557221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 12136362 - 12136567
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| || ||    
T  12136362 tgtcggtacttggagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgatttatatacattgcgactgttgaggactt 12136461  T
Q  141 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggc 240  Q
    ||||||||||||     |||| ||| |  |||||||||||||||||||||||  |||  | | |||| || ||||||||| ||||||||||||||| |||    
T  12136462 ttatatatgcatgttgttttgatttttaatgaagacgtagcgtctatttcttggataaatgttttattcgcgtgttttatcgctttaatagaaatatggc 12136561  T
Q  241 gttaca 246  Q
    ||||||    
T  12136562 gttaca 12136567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 45 - 247
Target Start/End: Complemental strand, 14569497 - 14569295
Alignment:
Q  45 gggatttggagaatttatatgatgatgtattt--tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattttt 142  Q
    |||||||||||| ||||||||||||| ||| |  ||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||  | ||||    
T  14569497 gggatttggagattttatatgatgatatatatattggacttatgacatgtatattttggagatgtatgatttatattcgctgcgactgttgagaaatttt 14569398  T
Q  143 atatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgt 242  Q
    ||||||||||   ||||||  || |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||| ||||| ||    
T  14569397 atatatgcatgt-tgtttgaatt-tgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgctttaatagaagtagggtgt 14569300  T
Q  243 tacat 247  Q
    |||||    
T  14569299 tacat 14569295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10239480 - 10239724
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||| ||||||||||||||  ||| ||||||| ||||| ||||||| |||| ||||||||||||| ||||||||||||||| |||     
T  10239480 tttattttggatttatttgtgttgtggagatttacccaattgtcggaatttgaagaatttttatgttgatgtattttgacctcatggcatgtatactttt 10239579  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||  |||||| |||||||||||||| || ||  |  |||||||||||||| |   | ||||     |||||| || || |||||||||||||  ||||||    
T  10239580 gaagtgtatggtttatatccgctgcaacggtatagaatttttatatatgc-ttgttatttgaacattgttgatgatgtggcgtctatttcttggatattt 10239678  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||    
T  10239679 atattattcgcgtgttttattgctttaatagaaatagggcgctaca 10239724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 115 - 247
Target Start/End: Complemental strand, 12729428 - 12729296
Alignment:
Q  115 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 214  Q
    ||||||||||||||||||||  ||||||||||||||||     ||| |||| ||||||||||||||||||||||||||||||||||||||||| || |||    
T  12729428 atatccgctgcgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttaaatatttatattattcgcgtg 12729329  T
Q  215 ttttattgctttaatagaaatagggcgttacat 247  Q
    |||||| |||||||||||| |||||||||||||    
T  12729328 ttttatcgctttaatagaagtagggcgttacat 12729296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 13449102 - 13449298
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||| ||| ||| |||||  |||||||||||||| ||||||||  ||||||||| ||    
T  13449102 tttggagaattt-tatgatgatgtattc-gatctcatgacatgtatacttttgaggtgtatagtttatatccgctgcaactgttgagaatttttatacat 13449199  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||     ||||| || |||||| |||||  |||||||||||| |||||| ||||||| || ||||||||| |||||||||||||||||||||||||||    
T  13449200 gcatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatt-atattattcgcgtgttttatcgctttaatagaaatagggcgttacatt 13449298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 17378244 - 17378473
Alignment:
Q  15 atttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||||||| || ||| |||| ||| ||||||| ||||| |  |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  17378244 atttatgttgttgagattttgctcatgtgtcaggacttggagattttatgt--tgatgtatattgatcttatgacatgtatattttggagatgtatgatt 17378341  T
Q  114 tatatccgctgcgactgttgaaga-tttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    |||||||||||||||| |||| || ||||| |||||||||  ||||| | | | ||||||||||||| | | |||||||| ||||||   ||||| |  |    
T  17378342 tatatccgctgcgactattgatgaatttttgtatatgcatg-atgttcgatatttgttgaagacgtaacatttatttcttgaatattgg-attattcacg 17378439  T
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||||||| ||||||||    
T  17378440 tgttttatcgctttaatagaaatagcgcgttaca 17378473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 5407243 - 5407062
Alignment:
Q  63 atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg 162  Q
    |||||||||||||| |||||||||||||||||| |||| || |||||| |||||||||||||| ||||||||  || |||||| ||||||     |||||    
T  5407243 atgatgatgtattt-gatctcatggcatgtatactttg-aggtgtatggtttatatccgctgcaactgttgagaatatttatacatgcatgttgttttgg 5407146  T
Q  163 tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || | |||||||||| ||||||||| ||| |||||||||||||  || |||||||||  ||||||||||||||||||||||||    
T  5407145 attttattgaagacgtggcgtctattacttgaatatttatattactcgcgtgttttatcactttaatagaaatagggcgttaca 5407062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15216280 - 15216379
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||| |||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  15216280 tttattctggacttatttatgttgtggagactttcccaattgtcgggatttggagaatttatatgatgatgtattttaatctcatggcatgtatactttg 15216379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 54366187 - 54366332
Alignment:
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||||| ||||||||||  ||||||||||||||||     ||| |||| |||||||||||||||||||||||||| ||||| |    
T  54366187 gagatgtatgatctatatccgctacgactgttgagaatttttatatatgcatgttgattttgtttttgttgaagacgtagcgtctatttcttgaatatat 54366286  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
       |||| || |||||||||||||||||||||||||| ||||||||    
T  54366287 gctttattcgcgtgttttattgctttaatagaaatagagcgttaca 54366332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 18241235 - 18241471
Alignment:
Q  11 atttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat 109  Q
    |||| |||||||| | || ||||  ||| |||||||||||| ||| |||||  |||||||||||| ||||  |||| ||||||||  ||| ||  | |||    
T  18241235 atttttttatgttttagatatttacccagttgtcgggattttggaaaattttgatgatgatgtatgttgacatcatagcatgtatgcttttgaattatat 18241334  T
Q  110 gatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 209  Q
    |||||||||||||||| ||||||||  ||||||||| ||||||     ||| | || |||||| || |||||||||||||||| | |||||||||||| |    
T  18241335 gatttatatccgctgcaactgttgagaatttttatacatgcatgttgttttcgattttgttgatgatgtagcgtctatttcttgactatttatattattc 18241434  T
Q  210 gtgtgttttattgctttaatagaaatagggcgttaca 246  Q
      ||||||||| ||||||||||||||||||| |||||    
T  18241435 acgtgttttatcgctttaatagaaatagggcattaca 18241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 19082979 - 19083211
Alignment:
Q  2 ttattctggatttatttatgttgtggagatttggc-catttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata-tttt 99  Q
    |||| ||||||||||| ||||||| |||||||  | ||| |||||||||||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||    
T  19082979 ttatgctggatttatt-atgttgttgagattttacgcatatgtcgggatttggagattttatatggtgatgtatgttgatttcatgacatgtatattttt 19083077  T
Q  100 ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt-ggtttctgttgaagacgtagcgtctatttcttaaatat 198  Q
     |||||||||| | |||||| ||||||| | |||| || ||||||||| ||||   ||||| |   | | ||||||| ||| || ||||||||| |||||    
T  19083078 tgagatgtatgttatatatctgctgcgatttttgaggaattttatataggcat-gttgtttcgaaatattttgaagatgtaacgcctatttcttgaatat 19083176  T
Q  199 ttatattatccgtgtgttttattgctttaatagaa 233  Q
    ||  ||||| || ||||||||| ||||||||||||    
T  19083177 ttgcattattcgcgtgttttatcgctttaatagaa 19083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 41258428 - 41258663
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||| |||||||||  ||||||||||||| |||||  | ||  ||||| |||||||| ||| ||||||||||||| ||||| || | |    
T  41258428 tggatttattcatgtt-tggagatttacccatttgtcgggacttgga--actttcatgattatgtattt-gatatcatggcatgtatgttttgaag-tat 41258522  T
Q  108 atgatttatatccgctgcgactgttgaagattttt-atatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    ||| |||||||||||||||||||||||  |||||| ||| ||||||     ||||| || ||| ||| || |||||||||||||||| ||||| | || |    
T  41258523 atggtttatatccgctgcgactgttgagaatttttaatacatgcatgttgttttggattttgtatgatgatgtagcgtctatttcttgaatatatgtact 41258622  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || ||||||||| | ||||||||||||||||| |||||    
T  41258623 attcgcgtgttttatcgttttaatagaaatagggcattaca 41258663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 247
Target Start/End: Complemental strand, 42706847 - 42706674
Alignment:
Q  75 tttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatac--atgtttggtttctgtt-g 171  Q
    |||||| ||||||||||||| ||||| || | |||||||||||||||||||||||| ||| ||||| |||  ||||||    || || | |||  ||| |    
T  42706847 tttgatatcatggcatgtatgttttgaag-tatatgatttatatccgctgcgactgatga-gatttctatgcatgcatgttgattttggattttggttcg 42706750  T
Q  172 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    | ||||||||||||||||||| ||||| | |||||| || ||||||||| ||||||||||||||||||||||||||    
T  42706749 atgacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggcgttacat 42706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 24236974 - 24236830
Alignment:
Q  103 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||   |||||| |||  |   ||||| ||||||||||||||||| ||||  |    
T  24236974 gatgtatgacttatatccgctgcgactgttgaataattttatatatgcat-gttgtttgattttggatgtgaaggcgtagcgtctatttcttgaataaat 24236876  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     | |||| || ||||||||| ||||||||||||||| |||||||||    
T  24236875 gttttattcgcgtgttttatcgctttaatagaaataaggcgttaca 24236830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 18274923 - 18274701
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatga-tttatatccgc 122  Q
    |||||||||  |||||| |||||| |||||||| || |||| ||||||| ||||||| ||||| |||||||  |||| |  | ||||  ||||||||| |    
T  18274923 tggagatttacccatttttcgggacttggagaacttttatgttgatgtacttttgatatcatgacatgtatgctttgaat-tatatgggtttatatccac 18274825  T
Q  123 tgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttatt 221  Q
    |||||||||||| |||||||||| ||||||     ||||| || |||| || |||||||| |||||||||| ||||| | |||| | || |||||||||     
T  18274824 tgcgactgttga-gatttttatacatgcatgttattttggattttgtttgatgacgtagcatctatttcttgaatatatgtattgttcgcgtgttttatc 18274726  T
Q  222 gctttaatagaaatagggcgttaca 246  Q
     ||||||||||||||||||||||||    
T  18274725 actttaatagaaatagggcgttaca 18274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 12732283 - 12732212
Alignment:
Q  48 atttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatc 119  Q
    ||||||||||||| | | |||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  12732283 atttggagaatttttttaatgatgtattttgatctcatggcatgtagactttggagatgtatgatctatatc 12732212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 31113668 - 31113600
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||||| |||||| ||  ||||||||||||||||||||||||||||||||||    
T  31113668 gtagcgtctatttcttgaatattt-tattattcgcatgttttattgctttaatagaaatagggcgttaca 31113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 12370654 - 12370720
Alignment:
Q  180 gcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||  ||||||| |||||| || ||||||||| |||||||||||||||||||||||||    
T  12370654 gcgtctatttctggaatatttgtattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12370720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 14503753 - 14503825
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacattc 249  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| |||||||||||||||||||||||||||||||    
T  14503753 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttacattc 14503825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 14867346 - 14867267
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||| ||||| ||||| ||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||||||||||||    
T  14867346 ttgatgacgtggcgtcaatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggcgttacatt 14867267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 15853494 - 15853567
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||||||| ||||| ||  |||| || | ||||||| ||||||||||||||||||||||||||    
T  15853494 gacgtagcatctatttcttgaatatatactttattcgcgagttttatcgctttaatagaaatagggcgttacat 15853567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 24237041 - 24236980
Alignment:
Q  2 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttat 62  Q
    ||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||| |||||    
T  24237041 ttattctgggtttatttatgttgtggagattttatccatttgtcgggatttggagactttat 24236980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 33240282 - 33240218
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||||| |||||| ||  ||||||||||||||||| ||||||||||||||||    
T  33240282 cgtctatttcttgaatattt-tattattcgcatgttttattgctttaattgaaatagggcgttaca 33240218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 12338883 - 12338947
Alignment:
Q  182 gtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| || ||||||  | ||||||||| |||||||||||| ||||||||||||    
T  12338883 gtctatttcttaaataattgtattattggcgtgttttatcgctttaatagaagtagggcgttaca 12338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 22736422 - 22736351
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  22736422 acgtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtagggcgttaca 22736351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 7966659 - 7966768
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  ||||||||||||| || ||||| || |||| ||||||| ||||||| |||||||||||||  ||| || |  |||| ||||||| ||||    
T  7966659 tggagatttacccatttgtcgggaattagagaacttttatgttgatgtatttttgatatcatggcatgtatgcttt-gaaacatatggtttatattcgct 7966757  T
Q  124 gcgactgttga 134  Q
    |||||||||||    
T  7966758 gcgactgttga 7966768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 17196229 - 17196307
Alignment:
Q  170 tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||||||||| |||||||||| ||||  ||| |||| || |||| |||| ||||||||| |||||||| ||||||||    
T  17196229 tgaagacgtagcatctatttcttgaataaatattttattcgcgtgtattatcgctttaataaaaatagggtgttacatt 17196307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 19824678 - 19824756
Alignment:
Q  168 gttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| ||||||||||||| ||||| ||||| | ||||||  | ||||||||| |||||||||||| ||||| ||||||    
T  19824678 gttgatgacgtagcgtctaattcttgaatatatttattatttgcgtgttttatcgctttaatagaattagggtgttaca 19824756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 34393022 - 34392952
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||||||||||    
T  34393022 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagggcgttaca 34392952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 38762732 - 38762670
Alignment:
Q  184 ctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||| ||||||||||| || || || ||||||  ||||||||||||||||||||||||    
T  38762732 ctatttcttgaatatttatatcattcgcgtattttatcactttaatagaaatagggcgttaca 38762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 7966813 - 7966886
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||||||||||||||||| ||||| |   |||| || ||||||||| |||||||||||||||| | |||||||    
T  7966813 gacgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatagagtgttacat 7966886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 15116513 - 15116586
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||||||| ||||  | |||||| ||  |||| |||||||||||||||||||||| |||||||    
T  15116513 gacgtagcatctatttcttgaataaatgtattattcgcatgttgtattgctttaatagaaatagggtgttacat 15116586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 15677172 - 15677240
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||||| |||||  ||| ||||||||| ||||||||||||||||| ||||||    
T  15677172 gtagcatctatttcttgaatattt-tattagtcgtatgttttattactttaatagaaatagggtgttaca 15677240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 34198241 - 34198452
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatat--ccgctgcgactgtt 132  Q
    ||||||||||||| |||||||| ||  ||||| ||||||||| ||| |||||||||||||  ||  ||  | |||| |||||||  ||||||||||||||    
T  34198241 ccatttgtcgggacttggagaactttcatgattatgtattttcgatatcatggcatgtatgctt--gatttatatggtttatatatccgctgcgactgtt 34198338  T
Q  133 gaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    || |||||||||  ||||||     ||||  || ||| ||| |||||||||||| |||||||||||  | |||||| ||  | || ||||||||||||||    
T  34198339 ga-gatttttatgcatgcatgtgaatttgaattttgtatgaggacgtagcgtct-tttcttaaataaatgtattattcgcatattatattgctttaatag 34198436  T
Q  232 aaatagggcgttacat 247  Q
    |||||||| |||||||    
T  34198437 aaatagggtgttacat 34198452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 18496687 - 18496759
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| |   ||||||||||||||||||||||||||| ||||||    
T  18496687 gacgtagcatctatttcttgaataaatgtattattctcatgttttattgctttaatagaaatagggtgttaca 18496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 27959014 - 27958942
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||  | |||||| ||  ||||||||| |||||||| |||||||| ||||||    
T  27959014 gacgtagcgtctatttcttgaataaatgtattattcgcatgttttattactttaataaaaatagggtgttaca 27958942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 41168127 - 41168195
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgt 242  Q
    ||||||||||||||||||| |||| ||   |||| |  ||||||||| |||||||||||||||||||||    
T  41168127 gacgtagcgtctatttcttgaataattgccttattcacgtgttttatcgctttaatagaaatagggcgt 41168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 55379113 - 55379185
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||||| ||||||||||||| ||||||    
T  55379113 gacgtagcctctatttcttgaataaatgtattattcgcatgttttattgcttaaatagaaatagggtgttaca 55379185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 109417 - 109346
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||| |||||||||| ||||  |||||||| ||  ||||| |||||||||||||||||||| ||||||||    
T  109417 cgtagcctctatttcttgaataaatatattattcgcatgtttaattgctttaatagaaataggagcgttaca 109346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 12246447 - 12246521
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||||||||||||||| ||||| |   |||| || | ||||||  |||||||||||||||||| ||||||||    
T  12246447 gacgtagcgtctatttcttgaatatatgctttattcgcgagttttaccgctttaatagaaatagggtgttacatt 12246521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 15216409 - 15216443
Alignment:
Q  212 gtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||| |||||||||||||||||||||||||    
T  15216409 gtgttttatcgctttaatagaaatagggcgttaca 15216443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 17194573 - 17194619
Alignment:
Q  88 catgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||||||| ||| | ||||||||||||||||||||| ||||||||||    
T  17194573 catgtatactttagtgatgtatgatttatatccgctacgactgttga 17194619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 18166510 - 18166440
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  18166510 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 18166440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 17214058 - 17214123
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| |||| ||  ||||| ||||| |||||| ||||||||||||||| | |||||||    
T  17214058 cgtctatttcttgaataattgcattattcgtgtattttatcgctttaatagaaatatgacgttaca 17214123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 18998008 - 18997939
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  18998008 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 18997939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 19699977 - 19700046
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  19699977 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 19700046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 19710562 - 19710631
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  19710562 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 19710631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 32462780 - 32462849
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| |   ||||| ||||||||||||||||||||| ||||||    
T  32462780 gtagcgtctatttcttgaatatatgaattattcacatgtttaattgctttaatagaaatagggtgttaca 32462849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 43286655 - 43286688
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  43286655 tgttttattgctttaatagaaatagggtgttaca 43286688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 13244273 - 13244213
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    |||||| |||||||||||||||  | |||||| ||  ||||| ||||||||||||||||||    
T  13244273 cgtagcctctatttcttaaataaatgtattattcgcatgtttaattgctttaatagaaata 13244213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 13752509 - 13752573
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  13752509 gacgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 13752573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 37474370 - 37474298
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||| ||||||||    
T  37474370 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggtgttacatt 37474298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 5e-75; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 21041915 - 21041681
Alignment:
Q  13 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 112  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||    
T  21041915 ttatttatgttgtggagatttacccatttgtcgggatttggagaatttatatgatgatgtattttgatcacatgacaagtatactttggagatgtatgat 21041816  T
Q  113 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    ||||||||||||||||||||||  | ||||||||||||||     ||| |||| |||||||| |||||||||| |||||| |||||||||||||| || |    
T  21041815 ttatatccgctgcgactgttgagaaattttatatatgcatgttgatttagtttttgttgaaggcgtagcgtctgtttcttgaatatttatattattcgcg 21041716  T
Q  213 tgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||||||||| |||||||||||||    
T  21041715 tgttttatcgctttaatagaagtagggcgttacat 21041681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 40555509 - 40555265
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| | |     
T  40555509 tttattttggatttatttatgttgtggagatttgcccatttgtcgggatttgaagaattt-tatgatgatgtattttgatctcatgacatgtatactatt 40555411  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||| |||||||||||||| ||||||||  |||||||||||||| |     ||| |||| |||||| ||||| ||||||||||||| |||||||    
T  40555410 gaggtgtatggtttatatccgctgcaactgttgagaatttttatatatgcctgttgattttgtttttgttgatgacgtggcgtctatttcttgaatattt 40555311  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||    
T  40555310 atattattcgcgtgttttatcgctttaatagaaatagggcgttaca 40555265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41213698 - 41213941
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||  |||||||| |||     
T  41213698 tttattctggatttatttatgttatggagatttgcccatttgtcgggatttggagaatttttatgatgatgtattttaatctcattacatgtatactttt 41213797  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||| |||||||| ||||| ||||||||  ||||||||||||||||   || ||||||| |||||| ||||||||||||||||||| |||||||    
T  41213798 gaggtgtatggtttatatctgctgcaactgttgagaatttttatatatgcat-gttgattggttt-tgttgatgacgtagcgtctatttcttgaatattt 41213895  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||  | || |||||| ||||||||||||||||||| |||||    
T  41213896 atattatttgcgtattttatcgctttaatagaaatagggcattaca 41213941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 5770235 - 5770470
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||     
T  5770235 tttatcctggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatatatactttt 5770334  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| ||| || | |||||||||||| ||||||||  ||||||||||| ||||   |||||||||  |||||| ||||| ||||||||||||| |||||||    
T  5770335 gaggtgtctggtctatatccgctgcaactgttgagaatttttatataagcat-gttgtttggttcttgttgatgacgtggcgtctatttcttgaatattt 5770433  T
Q  201 atattatccgtgtgttttattgctttaatagaaatag 237  Q
    |||| || | |||||||||| ||||||||||||||||    
T  5770434 atatgattcatgtgttttatcgctttaatagaaatag 5770470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 47 - 246
Target Start/End: Original strand, 78576 - 78775
Alignment:
Q  47 gatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatat 146  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  ||||||| ||    
T  78576 gatttggagaatttacatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatctatatccgctgccactgttgagaatttttacat 78675  T
Q  147 atgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttac 245  Q
    ||||||   ||||||| ||| |||||| ||| ||| ||||||||||| |||||||||||||| || ||||||||| ||||||| ||||||||||||||||    
T  78676 atgcat-gttgtttggatttttgttgatgacatagtgtctatttcttgaatatttatattattcgcgtgttttatcgctttaacagaaatagggcgttac 78774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33384056 - 33383841
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||| | ||||    
T  33384056 tttattctggatttatttatgtttcggagatttgcccatttgtcggaatttggagaatttttatgatgttgtattttgatctcatgacatgtagactttg 33383957  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||||||| ||||||||  |||||||||||||| |   ||||||| || | |||| |||||| |||||||||||| |||||||    
T  33383956 gagatgtatgatctatatccgctgcaactgttgagaatttttatatatgc-ttgttgtttggattttcttgatgacgtaacgtctatttcttgaatattt 33383858  T
Q  201 atattatccgtgtgttt 217  Q
    ||||||| || ||||||    
T  33383857 atattattcgcgtgttt 33383841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 5472439 - 5472680
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||    
T  5472439 tggatttatttatgtt-tggagatttacccatttgtcgggatttggagaatttatatgatgatgtatttcgatatcatgacatgtatacttttgagatgt 5472537  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttctt--aaatatttata 203  Q
    ||||| | ||||||||||||||||||   ||||||||| ||||||     ||||| || ||  |||| |||||||||||||||||||  | |||||||||    
T  5472538 atgatctttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgaattgatgacgtagcgtctatttcttgaatatatttata 5472637  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || ||||||||  | ||||||| |||||||||||||||    
T  5472638 ttattcgcgtgttttaccgatttaatataaatagggcgttaca 5472680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 50001991 - 50002229
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||  |||||||||  ||| ||||||||||||||||||||| |||  |||  |||||| || ||||||||||||||  || |||||||    
T  50001991 tggatttatttatgtgctggagatttacccacttgtcgggatttggagaatttttatattgagatatttttatatcatggcatgtatacctttgagatgt 50002090  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||||| | ||||||||||||||||||   ||||||||| ||||||     ||||| || |||||| |||||  || ||||||||| ||||||||||||||    
T  50002091 atgatatttatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgttgatgacgtgacgactatttcttgaatatttatattat 50002190  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || ||||||||| |||||||||||||||||||||||||    
T  50002191 tcgcgtgttttatcgctttaatagaaatagggcgttaca 50002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 46143898 - 46143667
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||| |||||||| ||| ||| |||||  ||||    
T  46143898 ttatgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatcgttta 46143799  T
Q  116 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 215  Q
    |||||||||||||||||||  ||||||||| ||| ||     ||||| || |||||| |||||  |||||||||||| |||||||||||||| || ||||    
T  46143798 tatccgctgcgactgttgagaatttttatacatggatgttgttttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgt 46143699  T
Q  216 tttattgctttaatagaaatagggcgttacat 247  Q
    ||||| | ||||||| ||||||||||||||||    
T  46143698 tttatcgatttaatataaatagggcgttacat 46143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 29217275 - 29217047
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttat 116  Q
    ||||||| |||||||||  ||| ||||||| ||||||||||||| ||||||| ||||||||||| || | ||||||||  ||| ||  | |||| |||||    
T  29217275 ttatgttttggagatttacccaattgtcggaatttggagaatttttatgatgttgtattttgatttcttagcatgtatgcttttgaattatatggtttat 29217176  T
Q  117 atccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgtt 216  Q
    ||||||||| |||||||| || ||||||| ||||||     |||||||| |||||| |||||||||| |||||||| |||||||||||||| || |||||    
T  29217175 atccgctgcaactgttga-gaattttatacatgcatgttgttttggtttttgttgatgacgtagcgtatatttcttgaatatttatattattcgcgtgtt 29217077  T
Q  217 ttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||||||||||||||| || ||||||    
T  29217076 ttatcgctttaatagaaatatggtgttaca 29217047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 247 - 368
Target Start/End: Complemental strand, 30432458 - 30432337
Alignment:
Q  247 ttcgctgcatgttttgtttttcccggtcagtgtgagggtttggttgaactggttctcgattcgtcgagatactttgtgcttaagattgaagatggacaag 346  Q
    ||||| || |||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  30432458 ttcgccgcgtgttttgtttttcctggtcagcgtgagggttcggttgaaccggttctcgattcgtcgagatattttgttctgaagattgaagatggacaag 30432359  T
Q  347 ggaagcatgcgtttattggatt 368  Q
    ||||||||||||||||||||||    
T  30432358 ggaagcatgcgtttattggatt 30432337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 248
Target Start/End: Complemental strand, 20191845 - 20191651
Alignment:
Q  40 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatt 139  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||              ||||||||||||||||| |||||||||||||||  |||    
T  20191845 ttgtcgggacttggagaacttatatgatgatgtattttgatctcatgg--------------agatgtatgatttatattcgctgcgactgttgagaatt 20191760  T
Q  140 tttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaataggg 239  Q
    |||||||||||||     |||||||| | ||| |||||||||||||||||||| ||||  | | |||| |||||||||||| ||||||||||||||| ||    
T  20191759 tttatatatgcatgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgttttattcgtgtgttttatcgctttaatagaaataagg 20191660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 9293461 - 9293641
Alignment:
Q  25 tggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  ||| |||||||||||| |||||||||  |||||| ||||||||||| ||||| |||||||||||| ||  | |||||||||||||||||    
T  9293461 tggagatttatccaattgtcgggattttggagaattttgatgatgttgtattttgatatcatgacatgtatatttttgaattatatgatttatatccgct 9293560  T
Q  124 gcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||||||||||  ||||||||||||||||     ||| |||| |||||| ||| ||||||||||||||| |||||||||||    
T  9293561 gcgactgttgagaatttttatatatgcatgttgatttagtttttgttgatgacatagcgtctatttcttgaatatttatat 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 21193261 - 21193051
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    ||||||||||||| || ||||| || |||||| |||||||||||| |||| ||||||||  |||| || | |||| |||||||||||||||||||||||     
T  21193261 ccatttgtcgggacttagagaacttttatgattatgtattttgatatcatagcatgtatgctttgaag-tatatggtttatatccgctgcgactgttgag 21193163  T
Q  136 gatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaa 234  Q
     ||||||||| ||||||     ||||  || ||| ||| ||||||||||||||||||| ||||| | |||||| || ||||||||| |||||||||||||    
T  21193162 aatttttatacatgcatgttgttttgaattttgtatgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgttttatcgctttaatagaaa 21193063  T
Q  235 tagggcgttaca 246  Q
    ||||||||||||    
T  21193062 tagggcgttaca 21193051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 18164294 - 18164101
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  ||| ||||| |||||||| |||| || ||||||||||||||||||||| ||||||||  ||||||||| ||    
T  18164294 tttggagaattt-tatgatgatgtattc-gatatcatgacatgtatactttg-aggtgtatgatttatatccgctgcaactgttgagaatttttatacat 18164198  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||     ||||  || ||||||||| |  ||||||||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  18164197 gcatgttgttttgcattttgttgaagatgcggcgtctatttcttgaatatt-atattattcgcgtgttttattgctttaatagaaatagggcgttaca 18164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 12891447 - 12891609
Alignment:
Q  83 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcg 182  Q
    |||| ||||||||||||||||||||||||| |||||||| ||| | |||||||  ||||||||||||  |   ||||||| || |||||| |||||||||    
T  12891447 catgacatgtatattttggagatgtatgatctatatccgttgcaattgttgaaattttttatatatgtctgt-tgtttggattatgttgatgacgtagcg 12891545  T
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||| |||||||||||||| ||  |||||||| ||| |||||||| ||||||||||||    
T  12891546 tctatttcttgaatatttatattattcgcatgttttatcgctctaatagaagtagggcgttaca 12891609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40438370 - 40438463
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 94  Q
    |||||||||| ||||||||||||| ||||||| | ||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  40438370 tttattctggttttatttatgttgcggagattagcccatttgtcgggatttgaagaattgttatgatgttgtattttgatctcatggcatgtat 40438463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 246
Target Start/End: Complemental strand, 25091095 - 25090964
Alignment:
Q  115 atatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 214  Q
    ||||||||||||||||||||  ||||||||||||||||     ||| ||||  ||||||||||||||||||||||||| ||||  ||| |||| || |||    
T  25091095 atatccgctgcgactgttgagaatttttatatatgcatgttgatttagttttcgttgaagacgtagcgtctatttcttgaataaatattttattcgcgtg 25090996  T
Q  215 ttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||||| ||||||||||||    
T  25090995 ttttatcgctttaatagaagtagggcgttaca 25090964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 52397787 - 52397548
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||| ||||  ||||  |||||||  ||| ||  |     
T  52397787 tggatttatt-atgttttggagatttacccagttgtcgggattttggagaattttgatgatgatgtatgttgacgtcataacatgtatgcttttgaatta 52397689  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    |||| |||||||| |||||  |||| ||  ||||||||| ||||||    |||||  || |||||| | |||||||||||||| || |||||||| ||||    
T  52397688 tatggtttatatctgctgcatctgtcgagaatttttatacatgcatgtc-gtttgaattttgttgatggcgtagcgtctatttattgaatatttagatta 52397590  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    | || ||||||||| ||||||||||||||| |||||||||||    
T  52397589 ttcgcgtgttttatcgctttaatagaaataaggcgttacatt 52397548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 37236029 - 37236244
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatat--ccgctgcgactgtt 132  Q
    ||||||||||||| ||||||||  | |||| ||||||||||| ||| ||||| ||||||| ||||| || | ||||  ||||||  ||||||||||||||    
T  37236029 ccatttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgacatgtatgttttgaag-tatatggcttatatatccgctgcgactgtt 37236127  T
Q  133 gaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    || |||||||||| ||||||     ||| | || ||| ||| ||||||||||||||||||| ||||| | |||||| || ||||||||  ||||||||||    
T  37236128 ga-gatttttatacatgcatgttgttttagattttgtatgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgttttaccgctttaatag 37236226  T
Q  232 aaatagggcgttacattc 249  Q
    ||| ||||||||||||||    
T  37236227 aaacagggcgttacattc 37236244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 20820572 - 20820455
Alignment:
Q  2 ttattctggatttatttatgttgtggagatttggccatt-tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||| ||||| |||||||||| ||||||| |||| | ||||||||||| |||| ||||||||||||||||| ||||||| ||| | ||||||||||     
T  20820572 ttattctagatttgtttatgttgttgagattttgccaatatgtcgggatttagagattttatatgatgatgtatattgatcttatgacttgtatatttta 20820473  T
Q  101 gagatgtatgatttatat 118  Q
    ||||  ||||||||||||    
T  20820472 gagaattatgatttatat 20820455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 22837680 - 22837893
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    ||||||||||||| |||||||| ||  ||||| ||||||||| ||| ||||||||||||| ||| | ||   | || ||||||||||||||||||||||     
T  22837680 ccatttgtcgggacttggagaactttcatgattatgtatttttgatatcatggcatgtatgtttcgaagtattttggtttatatccgctgcgactgttg- 22837778  T
Q  135 agatttttatatatgcatacatgtttgg---tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    ||||||||||| ||||||     |||||   |||  ||||| |||||||| |||||||||| ||||  | |||||| ||  ||| |||||||||||||||    
T  22837779 agatttttatacatgcatgttgttttggatttttgagttgatgacgtagcatctatttcttgaataaatgtattattcgcatgtgttattgctttaatag 22837878  T
Q  232 aaatagggcgttaca 246  Q
    || ||||||||||||    
T  22837879 aagtagggcgttaca 22837893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 25092955 - 25092904
Alignment:
Q  40 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25092955 ttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatg 25092904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 20957103 - 20957312
Alignment:
Q  36 ccatttgtcgggatttggagaatttat-atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    ||||||||||||| ||| ||||||| | |||||  ||||||||||| ||||| |||||||||||  ||  |  | | ||||||||| |||| ||||||||    
T  20957103 ccatttgtcgggacttgaagaatttttcatgattctgtattttgatatcatgacatgtatattt--gaagtacaaggtttatatccactgcaactgttga 20957200  T
Q  135 agatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaa 233  Q
     || ||||||| |||||||    ||||| || ||| ||| || || ||||||||||||| ||||| | |||||| || |||||| || ||||||||||||    
T  20957201 -gaattttatacatgcatattattttggattttgtatgatgatgtggcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaa 20957299  T
Q  234 atagggcgttaca 246  Q
    |||||||||||||    
T  20957300 atagggcgttaca 20957312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 22148521 - 22148683
Alignment:
Q  82 tcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtag 180  Q
    |||||||||||||  |||| || | |||||||| ||||||||||||||||||| |||||||||| ||||||     ||| | || | | ||| |||||||    
T  22148521 tcatggcatgtatgatttgaagtt-tatgatttgtatccgctgcgactgttga-gatttttatacatgcatgttattttagattttatatgatgacgtag 22148618  T
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||| | |||||| || ||||||||| || |||||| |||||||||||||||    
T  22148619 cgtctatttcttgaatatatttattattcgcgtgttttatcgc-ttaatataaatagggcgttaca 22148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 17607027 - 17606816
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtatt-ttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    ||||||||||||| |||||||| ||  ||| ||||||||| ||||| |||||||||||||  |||| || | | || ||||||| ||||||||||||||     
T  17607027 ccatttgtcgggacttggagaactttcatgttgatgtattcttgatatcatggcatgtatgctttgaag-tatttggtttatattcgctgcgactgttg- 17606930  T
Q  135 agatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    |||||| |||  ||||||   ||  ||||  || || ||||  |||||||||||||||||| ||||| |   |||| || ||||||||| ||||||||||    
T  17606929 agatttctatgcatgcat-gttgaatttgaattttgtttgataacgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatag 17606831  T
Q  232 aaatagggcgttaca 246  Q
    |||||||||||||||    
T  17606830 aaatagggcgttaca 17606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 21223689 - 21223611
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||||||||| |||||||||||| |||||||  ||||| |  ||||||||| |||||||||||| ||| |||||||||    
T  21223689 ttgaagacgtaacgtctatttcttgaatatttgaattattcacgtgttttatcgctttaatagaagtagagcgttacat 21223611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 40438509 - 40438590
Alignment:
Q  156 tgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatag 237  Q
    ||||||| || |||||| |||||  |||||||||||| |||||||||||||| || |||||| || | ||||||||||||||    
T  40438509 tgtttggattttgttgatgacgtgacgtctatttcttgaatatttatattattcgcgtgtttgatcgttttaatagaaatag 40438590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19601155 - 19601083
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |||||||||||||| ||||| | |||||| || ||||||||| |||||||||||||| ||| ||||||    
T  19601155 gacgcagcgtctatttcttgaatatatgtattattcgcgtgttttatagctttaatagaaatggggtgttaca 19601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 20820430 - 20820354
Alignment:
Q  170 tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||| |||||||  |  ||||| ||| ||| |||||||||||||| |||||| ||||||||    
T  20820430 tgaagacgtagcgtctattttttaaataaatgcattattcgtttgtattattgctttaataaaaatagagcgttaca 20820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 27672749 - 27672677
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||  | | |||| || ||||||||  |||||||||||||||||||||||||    
T  27672749 gacgtagcgtctatttcttgaataaatgttttattcgcgtgttttaccgctttaatagaaatagggcgttaca 27672677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 36358518 - 36358590
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  36358518 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttaca 36358590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 35524702 - 35524766
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| |||| || |||||| ||  ||||| ||||||||||||||||||||    
T  35524702 gacgtagcctctatttcttgaataattgtattattcgcatgtttaattgctttaatagaaatagg 35524766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 38035768 - 38035839
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||| |||| || | |||| || | ||||||  ||||||||||||||| |||||||||    
T  38035768 acgtagcgtctatttcttgaataattgtcttattcgcgagttttaccgctttaatagaaataaggcgttaca 38035839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 16243694 - 16243628
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||||| ||||||| |||||| || | |||||||  ||||||||||| ||||| |||||||    
T  16243694 cgtctatttcttgaatatttgtattattcgcgcgttttatcactttaatagaagtagggtgttacat 16243628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 15863884 - 15863953
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  15863884 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 15863953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 9294601 - 9294629
Alignment:
Q  218 tattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||||||||||||    
T  9294601 tattgctttaatagaaatagggcgttaca 9294629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 17021511 - 17021447
Alignment:
Q  182 gtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||| ||||| | |||||| || ||||||||  | ||||||||||||||| |||||||    
T  17021511 gtctatttcttgaatatatgtattattcgcgtgttttaccgttttaatagaaataggccgttaca 17021447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 21652258 - 21652322
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||||||| ||||  |||||||| ||  ||||| |||||||||||||||||||| ||||||||    
T  21652258 tctatttcttgaataaatatattattcgcatgtttaattgctttaatagaaataggagcgttaca 21652322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 21716081 - 21716017
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  21716081 gacgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 21716017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 51658589 - 51658661
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| ||| |||||| ||||  | |||||| ||  |||||||||||||| |||||||||||| ||||||    
T  51658589 gacgtagcatctgtttcttgaataaatgtattattcgcatgttttattgctttgatagaaatagggtgttaca 51658661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 22595711 - 22595944
Alignment:
Q  13 ttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgat 112  Q
    ||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  22595711 ttatttatgttttggagatttacccatttgtcggggtttggagaatttatatgatgatgtattttgatcacatgacatgtatactttggagatgtatgat 22595810  T
Q  113 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    ||||||| ||||||||||||||  | ||||||||||||||     ||| |||| |||||||||||||||||||||||||| |||||||||||||| || |    
T  22595811 ttatatctgctgcgactgttgagaaattttatatatgcatgttgatttagtttttgttgaagacgtagcgtctatttcttgaatatttatattattcgcg 22595910  T
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||| ||||||||||||    
T  22595911 tgttttatcgctttaatagaagtagggcgttaca 22595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 29162954 - 29163199
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||||||||||||||||||||| |||| |||||| ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||    
T  29162954 tttattctggatttatttatgttgtggagttttgcccatttttcgagatttgaagaatttatacgatgatgtattttgatctcatgacatgtatactttg 29163053  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||||||   ||||||| ||| |||||| || |||||||||||||||| ||||||    
T  29163054 gagatgtatgatctatatccgctgtgactgttgagaatttttatatatgcat-gttgtttggatttttgttgatgatgtagcgtctatttcttgaatatt 29163152  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||| |||| |  ||||||||| |||||||||||||||| ||||||||    
T  29163153 tatgttattcacgtgttttatcgctttaatagaaatagagcgttaca 29163199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 15006679 - 15006913
Alignment:
Q  11 atttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatg 110  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | |||  || ||||||    
T  15006679 atttatttatgttgtggagatttgcccatttgtcgggatttcgagaatttttatgatgttgtattttgatctcatggcatgtagacttttaaggtgtatg 15006778  T
Q  111 atttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccg 210  Q
     |||||||||||||| |||||| |  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| |||||||||||||| |     
T  15006779 gtttatatccgctgcaactgttaagaatttttatatatgcct-gttgtttggattttgttgatgacgtagcgtctatttcttgaatatttatattattcc 15006877  T
Q  211 tgtgttttattgctttaatagaaatagggcgttaca 246  Q
     ||||||||| |||||||||||||||||||||||||    
T  15006878 cgtgttttatcgctttaatagaaatagggcgttaca 15006913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 34965066 - 34964822
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||     
T  34965066 tttattctggatttatttatgttgtggagattttcccatttgtcgggatttagagaatttttatgatgatgtattttgatctcatggcatgtatactttt 34964967  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
     || |||||| |||||||| ||||| | ||||||  ||||||| |||||| |   |||||||  | |||||| ||||  |||||||||| || |||||||    
T  34964966 taggtgtatggtttatatctgctgcaaatgttgagaatttttaaatatgcct-gttgtttggactttgttgatgacgaggcgtctattttttgaatattt 34964868  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||    
T  34964867 atattattcgcgtgttttatcgctttaatagaaatagggcgttaca 34964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 247
Target Start/End: Original strand, 17858408 - 17858652
Alignment:
Q  3 tattctggatttatttatgttgtggagatttgg-ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    ||||||||||||||||||||  |||||||||   |||||||||||| ||| |||| ||||| |   ||||||| ||||||| ||| ||||||||  ||||    
T  17858408 tattctggatttatttatgtcatggagatttttaccatttgtcgggtttttgagattttatttatggatgtatgttgatcttatgacatgtataccttgg 17858507  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattta 201  Q
     ||||||||||||||||||||||||||||||||  ||||||||| ||||||   |||||| | | ||||| ||||||||| | |||||||| |||||||     
T  17858508 tgatgtatgatttatatccgctgcgactgttgagaatttttataaatgcat-gttgtttgatatttgttgcagacgtagcatgtatttcttgaatatttg 17858606  T
Q  202 tattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  17858607 tattattcgcgtgttttattgctttaatagaaatagggcgttacat 17858652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22468147 - 22468296
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | |||     
T  22468147 tttattctggatttatttatgttgtggagatttgtccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatgccatgtagacttta 22468246  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgc 150  Q
    |||||| ||||| |||||||||||| ||||||||  ||||||||||||||    
T  22468247 gagatgcatgatctatatccgctgcaactgttgagaatttttatatatgc 22468296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 12311051 - 12311287
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||| |||||||||   |||||||||||| ||||||||  | |||||| |||||||||||| |||||||||||||  |||| || | |    
T  12311051 tggatttattcatgtt-tggagatttacgcatttgtcgggacttggagaacatttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 12311148  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || ||||||  |||||||||||||||||| ||||| | ||||||    
T  12311149 atggtttatatccgctgcgactgttgagaatttttatacatgcatgttgctttggattttgttgataacgtagcgtctatttcttgaatatatgtattat 12311248  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || ||||||||| ||||||||||||||| |||||||||    
T  12311249 tcgcgtgttttatcgctttaatagaaatatggcgttaca 12311287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 16131386 - 16131146
Alignment:
Q  6 tctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggaga 104  Q
    ||||||||| |||||||||||||||||| ||| || |||||||||||||||| ||||||||  ||||||| ||| |||  || ||||||||||| |||||    
T  16131386 tctggatttgtttatgttgtggagattttgcccatatgtcgggatttggagattttatatggcgatgtatattgttctt-tgacatgtatattt-ggaga 16131289  T
Q  105 tgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||   |||||| |||   | ||||||||||||||||||||||| ||||  |       
T  16131288 tgtatgatttatatcccctgcgactgttgagaatttttatatatgcat-gttgtttgattttgatgtgaagacgtagcgtctatttcttgaataaatgct 16131190  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||| || |||||||||  ||||||||||||||||| |||||||    
T  16131189 ttattcgcgtgttttatccctttaatagaaatagggtgttacat 16131146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 19670621 - 19670426
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  |||||| ||||||||||  ||||||| |||||| |||||||||||||| ||||||||  ||||||||||||    
T  19670621 tttggagaatttttatgatgatgtattc-gatctcttggcatgtatgctttggaggtgtatggtttatatccgctgcaactgttgagaatttttatatat 19670523  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||     ||||| || |||||| ||  | ||||||||||||| |||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  19670522 gcatgttgttttggattttgttgatgatctggcgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 19670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 51 - 244
Target Start/End: Complemental strand, 23219065 - 23218873
Alignment:
Q  51 tggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgc 150  Q
    |||||| ||||||||||||||||| ||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||  |||||| |||||||    
T  23219065 tggagattttatatgatgatgtatattgatcttatgacatgtatattt-ggagacgtatgatttatatccgctgcgactgttgagaatttttctatatgc 23218967  T
Q  151 atacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||     |||||||| | ||| |||||||||||||||||||| ||||  |  ||||| ||  | |||||| | |||||||||||||||||||||    
T  23218966 atgttgatttggtttttattgtagacgtagcgtctatttcttgaataaatgcattattcgcattttttatcggtttaatagaaatagggcgtta 23218873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 16374088 - 16373877
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| ||| |||||||||||| ||||| || ||| |||| | |||  | ||| ||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  16374088 ccatatgttgggatttggagattttatttggtgacgtatgtatgagtttatgacatatatattttggagatgtatgttttatatccgctgcgacttttga 16373989  T
Q  135 agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaa 234  Q
     || ||||||||||||||     |||||  | ||||||||||||  |||||| ||||| ||||||| |||||| || ||||||||| |||||||||||||    
T  16373988 ggaattttatatatgcatgttattttggaatttgttgaagacgtcacgtctaattcttgaatatttgtattattcgcgtgttttatcgctttaatagaaa 16373889  T
Q  235 tagggcgttaca 246  Q
    || |||||||||    
T  16373888 taaggcgttaca 16373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 29603702 - 29603465
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| |||  |||  || |||||| ||||| |||||||  | |  |  |||    
T  29603702 tggatttatt-atgttttggagaattgcccacttgtcgggatttggagaatttttatattgagatactttgatatcatgacatgtatgctcttaaattgt 29603604  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| |||||||||||| ||||||||||  ||||||||| ||||||     ||||| || | |||| |||||  |||||||||||| ||||||||||||||    
T  29603603 atggtttatatccgctacgactgttgagaatttttatacatgcatgttgttttggatttttttgatgacgtgacgtctatttcttgaatatttatattat 29603504  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     ||||| |||||| |||||||||||||||||||| ||||    
T  29603503 tcgtgtattttatcgctttaatagaaatagggcggtaca 29603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 17375846 - 17375995
Alignment:
Q  98 ttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttg--aagacgtagcgtctatttcttaaa 195  Q
    |||| ||||||||| |||||| |||||||||||||||| | || |||||||| ||   ||||||||||  | ||  ||||||||||||||||||||||||    
T  17375846 ttggtgatgtatgacttatattcgctgcgactgttgaataattgtatatatgtatgt-tgtttggttttggatgtgaagacgtagcgtctatttcttaaa 17375944  T
Q  196 tatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||||||| |||||||||||| ||||||||||||||| |||||||||    
T  17375945 tattaatattattcgtgtgttttatcgctttaatagaaatatggcgttaca 17375995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 19852333 - 19852190
Alignment:
Q  103 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttat 202  Q
    |||||||| |||||||||||||| | ||||||  ||||||||| || |||    |||||| || |||||| ||| | |||||||||||||||||||||||    
T  19852333 gatgtatggtttatatccgctgcaattgttgagaatttttatacattcatgttggtttggattttgttgatgacatggcgtctatttcttaaatatttat 19852234  T
Q  203 attatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||    
T  19852233 attattcgtgtgtttttttgctttaatagaagtagggcgttaca 19852190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 31469602 - 31469795
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| ||||  | | || ||||||||||||||||||||| || |||||  ||||||||| ||    
T  31469602 tttggagaattt-tatgatgatgtattt-gatctcatgacatctatacgtcg-aggtgtatgatttatatccgctgcaaccgttgagaatttttatacat 31469698  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||     ||||| || |||||| ||||| ||||||||||||| |||||| ||||||| || ||||||||| | |||||||||||||||||||||||    
T  31469699 gcatgttgttttggattttgttgatgacgtggcgtctatttcttgaatatt-atattattcgcgtgttttatcgttttaatagaaatagggcgttaca 31469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 17085669 - 17085832
Alignment:
Q  82 tcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa-gacgtag 180  Q
    ||||| |||||||| |||| || | |||||||| ||||||||||||||||||| |||||||||| ||||||     ||||| || ||||| | ||||||     
T  17085669 tcatgacatgtataatttgaag-tatatgatttgtatccgctgcgactgttga-gatttttatacatgcatgttattttggattttgttggatgacgtaa 17085766  T
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||| | |||||| || ||||||||| |||||||||||||||||||||||||    
T  17085767 cgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggcgttaca 17085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 21929484 - 21929332
Alignment:
Q  94 tattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttctta 193  Q
    |||||||||||||||| || |||||| |||||||||||| |  ||||||||||||||||     ||| |||| |||||||||||||| |||||||||| |    
T  21929484 tattttggagatgtattatatatatctgctgcgactgttaagaatttttatatatgcatgttgattttgtttttgttgaagacgtagggtctatttctca 21929385  T
Q  194 aatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||  |   |||| || ||||||||| |||||||||||||||||| ||||||    
T  21929384 aataaatgctttattcgcgtgttttatcgctttaatagaaatagggtgttaca 21929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 22846244 - 22846013
Alignment:
Q  12 tttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatga 111  Q
    |||||| ||||| |||||||||  |||||||||| || || ||||| || ||||||  ||||||||| | ||||| |||||||  ||  ||  | ||||     
T  22846244 tttattcatgtt-tggagatttacccatttgtcgagactttgagaacttttatgatattgtattttgttatcatgacatgtatgctt--gatgtatatgg 22846148  T
Q  112 tttatatccgctgcgactgttgaagatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccg 210  Q
    |||||||||||||||||| |||| || ||||||| ||||||     ||||| ||| | |||| |||||||||| |||||||| |||||||||||||| ||    
T  22846147 tttatatccgctgcgactattga-gaattttatacatgcatgttgttttggattttttttgatgacgtagcgtttatttcttgaatatttatattattcg 22846049  T
Q  211 tgtgttttattgctttaatagaaatagggcgttaca 246  Q
     | ||||||| |||||||||||||||||||||||||    
T  22846048 cgggttttatcgctttaatagaaatagggcgttaca 22846013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 25649379 - 25649145
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||||  |||||||  |||| |||||||| |||||||| || |||| |||||||||||||| | |||  ||||||  |||  || | |    
T  25649379 tggatttattcatgttg--gagatttacccatgtgtcgggacttggagaacttttatgttgatgtattttgatattatgatatgtatgctttaaag-tat 25649283  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    ||| ||| |||||||||||||| |||| |||||||||  ||||||     |||||||| |||||| | | |  |||||||||||| ||||||||||||||    
T  25649282 atggtttgtatccgctgcgactattga-gatttttatgcatgcatggtgttttggtttttgttgatggcatgacgtctatttcttgaatatttatattat 25649184  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     || || ||||||  |||||||| |||||||||||||||    
T  25649183 tcgcgtattttatcactttaatataaatagggcgttaca 25649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19852400 - 19852327
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtat 74  Q
    |||||| ||||||||||||| || |||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  19852400 tttattttggatttatttatattttggagatttacccatttgtcgggatttggagaatttttatgatgatgtat 19852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 14150540 - 14150468
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| | |||||| |||||| ||||| |||||||||||||||||||||||||    
T  14150540 gacgtagcgtctatttcttgaatatatttattattcgtgtgctttatcgctttaatagaaatagggcgttaca 14150468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 6092498 - 6092419
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||||||||||||| |||||   |||||| || ||||||||| |||||||||||||||||||||||||    
T  6092498 tgttgatgacgtagcgtctatttcttgaatataattattattcgcgtgttttatcgctttaatagaaatagggcgttaca 6092419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 941243 - 941316
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||| || ||||| |||||||||||||| ||  |||||||| |||||||||||| |||||||||||||    
T  941243 gacgtagcgtataattcttgaatatttatattattcgcatgttttatcgctttaatagaattagggcgttacat 941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 15081067 - 15081137
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||| |||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||| |||||||    
T  15081067 gtagcatctatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggtgttacat 15081137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 23025044 - 23025120
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||  |||||| ||||| |||||| ||||||| || ||||||||| |||||||||||||||||| ||||||    
T  23025044 ttgaagacgtgacgtctaattctttaatatt-atattattcgcgtgttttatcgctttaatagaaatagggtgttaca 23025120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 25782565 - 25782642
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||  |||||||||||| ||||||| |||||| |  |||||||||  ||||||||||| ||||||||||||    
T  25782565 ttgaagacgtgacgtctatttcttgaatatttgtattattcacgtgttttatcactttaatagaagtagggcgttaca 25782642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 29531750 - 29531819
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||||||||||||||||||||||||| ||||||    
T  29531750 gtagcgtctatttcttgaatatatgaattattcgcatgttttattgctttaatagaaatagggtgttaca 29531819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 33540279 - 33540517
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||| |||||||||  ||| ||||||||| |||||||| || |||| ||||||||||| ||| |||| ||||| ||  ||| ||  |     
T  33540279 tggatttattcatgtt-tggagatttacccaattgtcgggacttggagaactt-tatgttgatgtatttttgatatcatagcatgcatgcttttgaatta 33540376  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    |||| |||||||||||||| || ||||| || | ||||| |||||||    ||||| || |||||| ||| || | |||||||||| ||||| | |||||    
T  33540377 tatggtttatatccgctgcaaccgttga-gaatgttatacatgcatatcgttttggattttgttgatgacataacatctatttcttgaatatatgtatta 33540475  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    | |   ||||||||  |||||||||||||| | |||||||||    
T  33540476 ttcacatgttttatcactttaatagaaatatgacgttacatt 33540517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 22364450 - 22364518
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||| ||||| |  ||||| || ||||||||  |||||||||||||||||||||||||    
T  22364450 tagcgtctatttcttgaatatatgcattattcgcgtgttttaccgctttaatagaaatagggcgttaca 22364518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 25917651 - 25917579
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||| ||||| ||||| | |||||| || |||||||||  ||||||||||| ||||||||||||    
T  25917651 gacgtagcgtctaattcttgaatatatttattattcgcgtgttttatcactttaatagaattagggcgttaca 25917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 15295531 - 15295586
Alignment:
Q  2 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggaga 56  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  15295531 ttattctggatttatttatgttgtgaagattttacccatttgtcgggatttggaga 15295586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 25369646 - 25369725
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||| |||||| | |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  25369646 ttgatgacgtatcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttacatt 25369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 7830125 - 7830195
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||||||||| |||| || | |||| |||| ||||||  |||||||||||||||||| |||||||    
T  7830125 gtagcgtctatttcttgaataattgtcttattcgtgagttttaccgctttaatagaaatagggtgttacat 7830195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 1553569 - 1553500
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  1553569 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaagtagggcgttaca 1553500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 4230522 - 4230579
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||||||| |||| || |||||| || |||||||||||||||||||||| ||||    
T  4230522 cgtctatttcttgaataattctattattcgcgtgttttattgctttaatagaagtagg 4230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 21621203 - 21621017
Alignment:
Q  62 tatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttat--atccgctgcgactgttgaagatttttatatatgcatacatgt 158  Q
    |||| ||||||| ||||||| ||||| ||||||| |||||||| | | || |||||  ||||||||||||||| || |||||||||| ||||||     |    
T  21621203 tatgttgatgtacttttgatatcatgacatgtatgttttggag-tatttggtttatgtatccgctgcgactgtcga-gatttttatacatgcatgttgtt 21621106  T
Q  159 ttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || | || ||| ||| |||||| |||||||||||||||||| | | |||| || | ||||||| | |||||||||||||||||| ||||    
T  21621105 ttagattttgtatgatgacgtaacgtctatttcttaaatatatgttttattcgcgagttttatcgttttaatagaaatagggcgataca 21621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 35011697 - 35011758
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||    
T  35011697 gtagcgactatttcttgaatattattattattcgcatgttttattgctttaatagaaatagg 35011758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 4174893 - 4174945
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaa 233  Q
    |||||||||||| |||| || |||||| || ||||||||||||||||||||||    
T  4174893 cgtctatttcttgaataattctattattcgcgtgttttattgctttaatagaa 4174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 16890016 - 16890092
Alignment:
Q  174 gacgtagcgtctatttcttaaatatt---tatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||| |||||||||||| |||| |   | |||||| || ||||||||| | ||||||||||||||||||||||||    
T  16890016 gacgtaacgtctatttcttgaataatatatttattattcgcgtgttttatcgttttaatagaaatagggcgttacat 16890092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 32278852 - 32278921
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||  ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  32278852 gtagcgtctatttctcgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 32278921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 16646116 - 16646180
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||||||| ||||  | |||||| ||  |||||||||||||||||||||||||| ||||||||    
T  16646116 tctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaataggagcgttaca 16646180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 22468324 - 22468360
Alignment:
Q  212 gtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  22468324 gtgttttatcgctttaatagaaatagggcattacatt 22468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 23162061 - 23161997
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||||||| ||||  | |||||| ||  |||||||||||||||||||||||||| ||||||||    
T  23162061 tctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaataggagcgttaca 23161997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 6092586 - 6092343
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| | | |||||| | ||||    
T  6092586 tttattctggatttatttatgttgcggagatttgcccatttgtcgggatttggagaatttttatgatgttgtattttgatcttacgacatgtagactttg 6092487  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||||||| |   ||||||| || |||||| ||||||||||||||||||| |||||||    
T  6092486 gagatgtatgatctatatccgctgcaactgttg-agaattttatatatgc-ttgttgtttggattttgttgatgacgtagcgtctatttcttgaatattt 6092389  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || ||||||||| ||||||||| |||||||||||||||    
T  6092388 atattattcgcgtgttttatcgctttaataaaaatagggcgttaca 6092343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24272183 - 24271938
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||| | |||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| |||     
T  24272183 tttattttggatttatttatgttttagagatttacccatttgtcgggatttggagaatttttatgatgatgtattttgatatcatgacatatatacttta 24272084  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| |||||||||||||||| |||||||||||||  ||||||||| ||||||     ||||| ||  ||||| ||||| ||||||||||||| |||||||    
T  24272083 gaggtgtatgatttatatccactgcgactgttgagaatttttatacatgcatgttattttggatttcgttgatgacgtggcgtctatttcttgaatattt 24271984  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | ||||| || ||||||||| |||||||||||||||||||||||||    
T  24271983 acattattcgcgtgttttatcgctttaatagaaatagggcgttaca 24271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 30995029 - 30995264
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||   ||||||||  ||| |||||||||||| |||||||| || | ||||||||||||||||| || |||||||| ||| ||| |||    
T  30995029 tggatttatttatgt---ggagattttcccaattgtcgggatttagagaatttttaggttgatgtattttgatctc-tgacatgtatacttttgaggtgt 30995124  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    ||| |||||||||||||||||||||||  |||||||||||||  |   | ||||| || ||  |||| ||||| ||||||||||||| ||||||||||||    
T  30995125 atggtttatatccgctgcgactgttgagaatttttatatatgtct-gttatttggattttgaattgatgacgtggcgtctatttcttgaatatttatatt 30995223  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || |||||||||||| ||||||||| |||||||||||||||    
T  30995224 attcgtgtgttttatcgctttaataaaaatagggcgttaca 30995264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 246
Target Start/End: Complemental strand, 43640446 - 43640240
Alignment:
Q  39 tttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagat 138  Q
    ||||| |||| || |||||||| |||||| |||||||||||| |||||||||||||  |||| || | |||| |||||||||||||||||||||| | ||    
T  43640446 tttgtagggacttagagaatttttatgattatgtattttgatatcatggcatgtatgctttgaag-tatatggtttatatccgctgcgactgttggaaat 43640348  T
Q  139 ttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    ||||||| ||||||     ||||| || |||||| |||||| |||||||||||| |||||||||  ||| || ||||||||| ||||||||| |||||||    
T  43640347 ttttatacatgcatgttgttttgggttttgttgatgacgtatcgtctatttcttgaatatttatgctattcgcgtgttttatcgctttaatataaatagg 43640248  T
Q  239 gcgttaca 246  Q
    ||||||||    
T  43640247 gcgttaca 43640240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 18533458 - 18533345
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||     
T  18533458 ccatatgttgggacttgaagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgttttatatccgctgcgactgttgag 18533359  T
Q  136 gatttttatatatg 149  Q
     |||||| ||||||    
T  18533358 aatttttttatatg 18533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 19643981 - 19643889
Alignment:
Q  42 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| ||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19643981 gtcgagatttagagaatttatatgatgatgtatattgatcttatgacatgtatattttggagatgtatgatttatatccgctgcgactgttga 19643889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25132353 - 25132254
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  25132353 tttattttggatttatttatattgtggagatttgcccatttgacgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatactttg 25132254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 246
Target Start/End: Complemental strand, 24839493 - 24839315
Alignment:
Q  69 atgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg 168  Q
    |||||| ||||||| ||| |||||||||||||||||  ||||| ||||||| ||||||||||||||  ||||||||||||||||   ||||||  || ||    
T  24839493 atgtatgttgatcttatgacatgtatattttggagacatatgaattatatctgctgcgactgttgagaatttttatatatgcat-gttgtttgaattttg 24839395  T
Q  169 --ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
       ||||||||||||||||||||||| ||| ||||||||||||| |||| | ||  |||||||||| |||||||||||||    
T  24839394 atatgaagacgtagcgtctatttcttgaatttttatattatccgcgtgtataatcactttaatagagatagggcgttaca 24839315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 19648211 - 19647975
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatt-ttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  || ||||  |||||| |||||| ||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||| || ||    
T  19648211 tggatttattcatgttg--gatatttacccatttatcgggacttggagagttt-tatgttgatgtattattgatatcatggcatgtatattttgaag-tg 19648116  T
Q  107 tatgatttata-tccgctgcgactgttgaagatttttatatatgcatacatgtttggt-ttctgt-tgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||| ||||||||||||||||| ||| || ||||||||||   |||||||  || ||| ||| || |||||||||||||||| ||||||  ||    
T  19648115 tatggtttataatccgctgcgactgttga-gatatt-atatatgcatgattgtttggaattttgtatgatgatgtagcgtctatttcttgaatattatta 19648018  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||  |||||||| |||||||||||||||||||||||||    
T  19648017 ttattcgcttgttttatcgctttaatagaaatagggcgttaca 19647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 247
Target Start/End: Original strand, 19435982 - 19436204
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttg-atctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  |||||| |||||| ||||||||  | |||| |||||||||||  || ||||||||||||| ||||| || | |||  ||||||||||||    
T  19435982 tggagatttacccatttctcgggacttggagaacatttatgttgatgtattttttatatcatggcatgtatgttttgaag-tatattgtttatatccgct 19436080  T
Q  124 gcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaa-gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattg 222  Q
    |||||||||| ||||||||||| ||||||     ||||| || |||| || || ||||| |||||||||| ||||| | |||||| || ||||||||| |    
T  19436081 gcgactgttg-agatttttatacatgcatgttgttttggattttgtttaatgatgtagcttctatttcttgaatatatgtattattcgcgtgttttatcg 19436179  T
Q  223 ctttaatagaaatagggcgttacat 247  Q
    ||||||||||||||||| |||||||    
T  19436180 ctttaatagaaatagggtgttacat 19436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 249
Target Start/End: Complemental strand, 20271066 - 20270817
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    |||| ||||||| |||||||| ||||||||| ||| || ||||||| |||||||| ||||| |  |||| ||||| ||  | ||| ||||||||||| ||    
T  20271066 tattatggatttgtttatgttatggagattttgcccatatgtcgggttttggagattttatgtattgatatatttggagtt-atgacatgtatattt-gg 20270969  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgca--tacatgtttggtttctgttgaagacgtagcg--tctatttcttaaata 197  Q
    |||||||||||||||||| ||||||||| ||||  |||||||||||| ||  |  || |||| ||| ||||||||||||||||  |||||||||| ||||    
T  20270968 agatgtatgatttatatctgctgcgactattgagaatttttatatattcatgttgat-tttgatttttgttgaagacgtagcgcatctatttcttgaata 20270870  T
Q  198 tttatattatccgtgtg-ttttattgctttaatagaaatagggcgttacattc 249  Q
      | | |||| || ||| |||||| |||||||||||||||||| |||||||||    
T  20270869 aatgttttattcgcgtgtttttatcgctttaatagaaatagggtgttacattc 20270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 25593267 - 25593213
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata 95  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25593267 tgtcgggacttggagaatttatgtgatgatgtattttgatctcatggcatgtata 25593213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 24381738 - 24381661
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||  |||||||||||| ||||||| |||||| || ||||||||| |||||||||||| ||||||||||||    
T  24381738 ttgaagacgtgacgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgttaca 24381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 22137922 - 22138084
Alignment:
Q  74 ttttgatctcatggcatgtatattttggagatgtatgatttata-tccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tg 171  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||| || |||||||||||||| |||||||||| ||||||     |||||  | ||| ||    
T  22137922 ttttgatatcatggcatgtatattttgaat-tatatgatttataatctgctgcgactgttga-gatttttatacatgcatgttgttttggaatttgtgtg 22138019  T
Q  172 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    | ||||||||||||||||||| ||||| | |||||| || |||||| || |||||||||||||||    
T  22138020 atgacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 22138084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 32738593 - 32738356
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  ||| |||  ||||||||||||| || ||||| || |||| | ||||||||| ||| ||||||||||||| |||||||| |     
T  32738593 tggatttattcatgttg--gagttttacccatttgtcgggactttgagaacttttatgtttatgtatttttgatatcatggcatgtatgttttggag-ta 32738497  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| ||||||| |||||||||||||| ||||||||||  ||||||   ||  ||||  || || ||||  |||||||||||||||||| ||||  |       
T  32738496 tatggtttatattcgctgcgactgttg-agatttttatgcatgcat-gttgaatttgaattttgtttgataacgtagcgtctatttcttgaataaatgcc 32738399  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| || ||||||||  |||||||||||||||||||||||||    
T  32738398 ttattcgcgtgttttaccgctttaatagaaatagggcgttaca 32738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 19643840 - 19643763
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||||||||| | ||||||| || |||||||  ||||| || ||||||||| |||||||||||||||||||||||    
T  19643840 tgttgaagacgtatcatctatttattgaatatttggattattcgcgtgttttatcgctttaatagaaatagggcgtta 19643763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 20021840 - 20021763
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||  ||||||||||| ||||||| |||||| |  ||||||||| |||||||||||| || |||||||||    
T  20021840 ttgaagacgtaatgtctatttcttgaatatttgtattattcacgtgttttatcgctttaatagaagtatggcgttaca 20021763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 23823645 - 23823779
Alignment:
Q  112 tttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 209  Q
    ||||||||||||||||||||||| |||||||||  ||||||   ||  ||||  || |||||| |||||||| |||||||||| |||| ||  ||||| |    
T  23823645 tttatatccgctgcgactgttga-gatttttatgcatgcatgt-tgaatttgaattttgttgatgacgtagcatctatttcttgaataattgcattattc 23823742  T
Q  210 gtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |  |||| |||||||||||||||||||||| ||||||    
T  23823743 gcatgttctattgctttaatagaaatagggtgttaca 23823779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 23825589 - 23825723
Alignment:
Q  112 tttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatcc 209  Q
    ||||||||||||||||||||||| |||||||||  ||||||   ||  ||||  || |||||| |||||||| |||||||||| |||| ||  ||||| |    
T  23825589 tttatatccgctgcgactgttga-gatttttatgcatgcatgt-tgaatttgaattttgttgatgacgtagcatctatttcttgaataattgcattattc 23825686  T
Q  210 gtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |  |||| |||||||||||||||||||||| ||||||    
T  23825687 gcatgttctattgctttaatagaaatagggtgttaca 23825723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 25255560 - 25255629
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  |||||||||||||||||||||||| |||||||||    
T  25255560 gtagcgactatttcttgaatattattattattcgcatgttttattgctttaatagaaatacggcgttaca 25255629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 32463874 - 32463805
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||| ||||| ||||||  |||||| ||  ||||||||||||||||||||||||||||||||||    
T  32463874 gtagcgactaattcttgaatattattattattcgcatgttttattgctttaatagaaatagggcgttaca 32463805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 34875984 - 34875919
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||||| |||||| ||  |||||||| |||||||||||| ||||||||||||    
T  34875984 cgtctatttcttgaatatttgtattattcgcatgttttatcgctttaatagaagtagggcgttaca 34875919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19655476 - 19655404
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| | |||||| || |||||| || |||||||| |||||| |||||||||    
T  19655476 gacgtagcgtctatttcttgaatatatttattattcgcgtgtttaatcgctttaattgaaataaggcgttaca 19655404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 25303548 - 25303476
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| |   |||| || | ||||||| |||||||||||||||||||||||||    
T  25303548 gacgtagcgtctatttcttgaatatatgctttattcgcgagttttatcgctttaatagaaatagggcgttaca 25303476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 25593207 - 25593128
Alignment:
Q  167 tgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||| ||||| |||||||||| ||||  | | |||| || ||||||||| |||||||||||||||||| ||||||    
T  25593207 tgttgaagatgtagcatctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaatagggtgttaca 25593128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 24296642 - 24296700
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 94  Q
    ||||||||||||| |||||||| ||  ||||| |||||||||||| |||||||||||||    
T  24296642 ccatttgtcgggacttggagaactttcatgattatgtattttgatatcatggcatgtat 24296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17202504 - 17202435
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||| ||||| ||||||||||||||||||||| ||||||    
T  17202504 gtagcgactatttcttgaatatatgaattatgcgtatgtttaattgctttaatagaaatagggtgttaca 17202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 23781587 - 23781652
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| |||| || || ||| || |||||||||||||||||||||| ||| ||||||||    
T  23781587 cgtctatttcttgaataattgtaatattcgcgtgttttattgctttaatagaagtagcgcgttaca 23781652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 24343612 - 24343680
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||||| |||||| |   |||||| ||||||||||||||||||| |||||||    
T  24343612 gtagcgtctatttcttgaatattt-tattattcacatgttttgttgctttaatagaaataggacgttaca 24343680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 9783077 - 9783149
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||  |||| |  ||||| || ||||||||| ||||||||| |||||||| ||||||    
T  9783077 gacgtagcgtctatttcttgtatatatgcattattcgcgtgttttatcgctttaatataaatagggtgttaca 9783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 22787714 - 22787786
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||| ||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  22787714 gacgtagcatctattgcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttaca 22787786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 24833284 - 24833356
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||||    
T  24833284 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttacatt 24833356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 28969846 - 28969774
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  28969846 gacgtagcatctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagggtgttaca 28969774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 28033305 - 28033376
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||| ||||||||||||||||| ||||    
T  28033305 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgcttcaatagaaatagggcgttccatt 28033376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 5417 - 5549
Alignment:
Q  114 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtg 212  Q
    ||||||||||||||||||||| |||||||||  ||||||     ||||  || ||| ||| ||||||||||||||||||| ||||  | | |||| || |    
T  5417 tatatccgctgcgactgttga-gatttttatgcatgcatgtgaatttgaattttgtatgatgacgtagcgtctatttcttgaataaatgtcttattcgcg 5515  T
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||  | || ||||||||||||||||||||    
T  5516 tgttttaccgtttaaatagaaatagggcgttaca 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 42180773 - 42180842
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  42180773 gtagcatctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 42180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 45620690 - 45620723
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||||||||||||||||||    
T  45620690 tgttttatcgctttaatagaaatagggcgttaca 45620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 7319367 - 7319295
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||| |||||| |||||||| ||||||    
T  7319367 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgccttaataaaaatagggtgttaca 7319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 20013043 - 20012979
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||||||| ||||  | |||||||||  ||||| |||||||||||||||||||| ||||||||    
T  20013043 tctatttcttgaataaatgtattatccgcatgtttaattgctttaatagaaataggagcgttaca 20012979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 45620576 - 45620604
Alignment:
Q  98 ttggagatgtatgatttatatccgctgcg 126  Q
    |||||||||||||||||||||||||||||    
T  45620576 ttggagatgtatgatttatatccgctgcg 45620604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 23236455 - 23236692
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||| |||    
T  23236455 tggatttatttatgttgtggagatttacccatttgtcgggatttggagaatttttatgatgttgtattttgatctcatggcatgtatacttttgaggtgt 23236554  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattat 207  Q
    |||||||||||||||||| ||||||||  |||||||||||||  |   ||||||| || |||||| |||||  |||||||||||| ||||||||||||||    
T  23236555 atgatttatatccgctgcaactgttgagaatttttatatatgtct-gttgtttggattttgttgatgacgtgacgtctatttcttgaatatttatattat 23236653  T
Q  208 ccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
      | ||||||||| |||||||||||||||||||||||||    
T  23236654 ttgcgtgttttatcgctttaatagaaatagggcgttaca 23236692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 14345743 - 14345955
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||     
T  14345743 ccatatgtcgggacttgaagaatttatatgatgatgtattttgatctcatgacatgtatactttggagatgtatgatttatatctgctgtgactgttgag 14345842  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     || ||||||||||  ||  || |||| || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  14345843 aatatttatatatgtcta-ttggttggattttgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgttttatctctttaatagaaat 14345941  T
Q  236 agggcgttacattc 249  Q
    ||||||||||||||    
T  14345942 agggcgttacattc 14345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 19872047 - 19871803
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | ||||    
T  19872047 tttatttttgatttatttatgttgtggagatttgctcatttgtcgggatttggagaattt-tatgatgttgtattttgatctcatgacatgtagactttg 19871949  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| | |||| ||||| ||| ||||  |||||||||||||| |   ||||||| || |||||| ||||||||||||||||||| |||||||    
T  19871948 gagatgtatgatctgtatctgctgcaactattgagaatttttatatatgcctgt-tgtttggattttgttgatgacgtagcgtctatttcttgaatattt 19871850  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||  |  |||||||| ||||||||||||||||||||||||||    
T  19871849 atattatttgcttgttttatcgctttaatagaaatagggcgttacat 19871803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 20456636 - 20456780
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  20456636 ccatatgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgtgactgttgag 20456735  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagc 181  Q
     ||||||||||||||||  ||||||||||| |||||||||||||||    
T  20456736 aatttttatatatgcatgtatgtttggttt-tgttgaagacgtagc 20456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 16837814 - 16838017
Alignment:
Q  42 gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttt 141  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||| | |||||||||||| |||||||||||||||||||| ||||  |||||    
T  16837814 gtcgggatttggagaatttatatgatgttgtatttttatcttatggcatgtagactttggagatgtaagatttatatccgctgcgactattgagaatttt 16837913  T
Q  142 tatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcg 241  Q
    |||||||||||     ||| |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||||||| ||||||||||||||| ||||    
T  16837914 tatatatgcatgttaattttgttt-tgttgaagacctagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaataaggcg 16838012  T
Q  242 ttaca 246  Q
    |||||    
T  16838013 ttaca 16838017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 3420870 - 3421117
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||| |||||||||   ||||||||||||| |||| ||  | ||| ||||||||||||||| ||||| |||||||| |||     
T  3420870 tttattgtggatttatttatgttttggagattttctcatttgtcgggatgtggaaaaaatttataatgatgtattttgatatcatgacatgtatactttt 3420969  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| ||||||||||||||| ||||||| ||||||  ||||||||| ||||||     ||||| || |||||| |||||  |||||||||||| |||||||    
T  3420970 gaggtgtatgatttatatctgctgcgattgttgagaatttttatacatgcatcttattttggattttgttgatgacgtgacgtctatttcttgaatattt 3421069  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||    
T  3421070 atattattcgcgtgttttatcgctttaatagaaatagggcgttacatt 3421117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 29912175 - 29911937
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  | ||||||| |||||||||||||| ||| |||||||    
T  29912175 tggatttatttatgtgttggagatttgcccacttgtcgggatttggagaatttttatattgagattttttgatatcatggcatgtatacttttgagatgt 29912076  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt-ggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    ||||||| |||| ||||||||||||| | ||||||||| ||||||   ||||| || || |||||| || ||  |||||||||||| |||||||||||||    
T  29912075 atgatttttatctgctgcgactgttggaaatttttatacatgcat-gttgtttcggattttgttgatgatgtgacgtctatttcttgaatatttatatta 29911977  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | |||||||||||| |||||||||||||||||| ||||||    
T  29911976 ttcgtgtgttttatcgctttaatagaaatagggtgttaca 29911937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5623456 - 5623701
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||| | |     
T  5623456 tttattgtggatttatttatgttttggagatttacccatttgtcgggatttggagaatttttatgatgatgtattgtgatatcatgacatgtatactatt 5623555  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||  ||||||||||||||||||||| ||||||||  ||||||||| || |||     ||||| || |||||| |||||  |||||||||||| |||| ||    
T  5623556 gatgtgtatgatttatatccgctgcaactgttgagaatttttatacatacatgttattttggattttgttgatgacgtgacgtctatttcttgaataatt 5623655  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || |||| |||  |||||||||||||||| ||||||||    
T  5623656 atattattcgcgtgtattaccgctttaatagaaatagagcgttaca 5623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 11963730 - 11963579
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||| ||||||||     
T  11963730 tttattctagatttatttatattgtggagatttgcccatttgtcaggatttggagattttatatgatgatgtatattgatcttatgacatttatattttt 11963631  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 152  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  11963630 gagatgtatgatttatatccgctgcgactattgagaatttttatatatgcat 11963579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 11765764 - 11765994
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||||| ||||||| ||| || |||||| |||| |||| ||||||||||||||||||||| |||  || ||||||||||||||||||||||||||    
T  11765764 atttatgttgttgagattttgcccatatgtcgg-attttgagattttatatgatgatgtattttgttcttttgtcatgtatattttggagatgtatgatt 11765862  T
Q  114 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 213  Q
    |||||||||||||||| ||||  | ||||||||||||||   |||| |  || ||||||||||||| |||||||||||| ||||  |   |||| |||||    
T  11765863 tatatccgctgcgactattgagaaattttatatatgcat-gttgttggtgttttgttgaagacgtaacgtctatttcttgaataaatgatttattcgtgt 11765961  T
Q  214 gttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| |||||||||||||||||||||||||    
T  11765962 gttttatcgctttaatagaaatagggcgttaca 11765994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 26561825 - 26562069
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| || ||||||||||||| |||||| ||  |||||||||||||||||||||| || |||||| ||| |||||||| ||||||| |||||| |||     
T  26561825 tttattgtgaatttatttatgttttggagaattacccatttgtcgggatttggagaaattttatgataatgaattttgatatcatggcttgtatactttt 26561924  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||  |||||||||||||||||||||||||||| ||| ||||||| ||||||     |||||||| |||||| ||| |   ||||||||||| |||||||    
T  26561925 gaggagtatgatttatatccgctgcgactgttg-agaattttatacatgcatgttgatttggtttttgttgaggacatgatgtctatttcttgaatattt 26562023  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| || |||| |||  ||||||| |||||||||||||||||    
T  26562024 atattattcgggtgtattaccgctttaaaagaaatagggcgttaca 26562069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 24082234 - 24082005
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||||||||| ||||| |||||||| ||| ||  | |||| ||||    
T  24082234 ttatgttttggagatttacccagttgtcgggattttggagaattttgatgatgatgtattttgatatcatgtcatgtatacttttgaattatatggttta 24082135  T
Q  116 tatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgt 215  Q
    |||||||||| ||||||||  ||||||||| ||||||     ||||| || |||||| ||||| ||||||||||||| |||| ||||||||| || ||||    
T  24082134 tatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttgttgatgacgtggcgtctatttcttgaata-ttatattattcgcgtgt 24082036  T
Q  216 tttattgctttaatagaaatagggcgttaca 246  Q
    | ||| |||||||||||||||||||||||||    
T  24082035 tgtatcgctttaatagaaatagggcgttaca 24082005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 37985940 - 37985731
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||| ||||||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||     
T  37985940 ccatatgtcgggatttggagattttatatgtcgatgtatgttgatcttatgacatgtatattttggagatgtatgatttatatctgatgcgactgttgag 37985841  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     |  |||||||||||||   |||||    ||| ||||||||| |||||||||||||| ||||||| |||||| |  |||| |||| ||||||||||||||    
T  37985840 aaaatttatatatgcat-gttgtttaaaatctattgaagacgcagcgtctatttcttgaatatttgtattattcacgtgtgttatcgctttaatagaaat 37985742  T
Q  236 agggcgttaca 246  Q
    |||| ||||||    
T  37985741 agggggttaca 37985731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 41 - 244
Target Start/End: Complemental strand, 23412081 - 23411879
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||  ||||    
T  23412081 tgtcaggatttggagaatttatatgatgatgtattt-gatctcatggcatgtatactttggagatgtatgatttatattcggtgcgactattgagaattt 23411983  T
Q  141 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggc 240  Q
    ||||| ||||||     |||||||| | ||| ||||||| |||||||||||| ||||  |   |||| ||  |||||||| ||||||||||||||| |||    
T  23411982 ttatacatgcatgttgatttggtttttattgtagacgtaacgtctatttcttgaataaatgatttattcgcatgttttatcgctttaatagaaataaggc 23411883  T
Q  241 gtta 244  Q
    ||||    
T  23411882 gtta 23411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 24227987 - 24228215
Alignment:
Q  8 tggatttatttatgttgtggagatttggccattt-gtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  |||||| ||||||| ||||||||||| |||||  |||||||||||| |||||||||||||  |||| || |     
T  24227987 tggatttattcatgttg--gagatttatccattttgtcgggacttggagaatttttatgactatgtattttgatatcatggcatgtatgctttgaag-ta 24228083  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    |||| ||||||||||||||||||||||   ||||||||| ||||||     ||||| || |||||| ||| ||||||||||||||| ||||| | |||||    
T  24228084 tatggtttatatccgctgcgactgttgggaatttttatacatgcatgttgttttggattttgttgatgacatagcgtctatttcttgaatatatgtatta 24228183  T
Q  207 tccgtgtgttttattgctttaatagaaatagg 238  Q
    | ||  |||||||| ||||||| |||||||||    
T  24228184 ttcgcatgttttatcgctttaagagaaatagg 24228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 37483115 - 37483277
Alignment:
Q  88 catgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtct 185  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||   ||||||  || ||   |||||||||||||| |    
T  37483115 catgtatatttttgagatgtatgacttatatccgctgcgactgttgatgaattttatatatgcat-gttgtttgaattttgatgtgaagacgtagcgttt 37483213  T
Q  186 atttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacattc 249  Q
    |||| || |||||||||||||| || |||| |||| |||| |||||||||| || |||||||||    
T  37483214 atttattgaatatttatattattcgcgtgtattatcgcttgaatagaaataaggtgttacattc 37483277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 6454833 - 6454593
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||| |||| ||||| ||| ||||||| |||| |||||||||  |||||||||||| ||||  ||||  |||||||  ||| ||  |     
T  6454833 tggatttatt-atgttttggatatttgcccagttgtcggaattttggagaattttgatgatgatgtatgttgacatcataacatgtatgcttttgaatta 6454735  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||| ||| ||||||||||||||||| |||| ||||||| ||||||     ||||| || ||  |||| |||||  |||||||||||| |||||||||||    
T  6454734 tatggtttgtatccgctgcgactgtt-aagaattttatacatgcatgttattttggattttgagttgatgacgtgacgtctatttcttgaatatttatat 6454636  T
Q  205 tatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||| || ||||||||| |||||||||||| |||||||||||||    
T  6454635 tattcgcgtgttttatcgctttaatagaagtagggcgttacat 6454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 22879931 - 22879787
Alignment:
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    |||||||||||| | ||||||||||||||||| |||| ||||||| ||||||     ||||| || |||  | ||||| ||||||||||||| |||||||    
T  22879931 gagatgtatgatctttatccgctgcgactgtt-aagaattttatacatgcatgttattttggattttgtgaatgacgtggcgtctatttcttgaatattt 22879833  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || |||| || ||||||||| |||||||||||||||||| ||||||    
T  22879832 atgttattcgcgtgttttatcgctttaatagaaatagggtgttaca 22879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 11963215 - 11963147
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  11963215 tagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 11963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 33628385 - 33628464
Alignment:
Q  96 ttttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagac 176  Q
    |||||||||||| ||||||||||||||||||| |||||| || ||||||||||||||  ||||||||||| ||||||||||    
T  33628385 ttttggagatgtctgatttatatccgctgcgagtgttgagga-ttttatatatgcatgtatgtttggtttttgttgaagac 33628464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 28887853 - 28887783
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    |||||| |||||||||||| ||||||  |||||| || ||||||||| |||||||||||||||||||||||    
T  28887853 gacgtatcgtctatttcttgaatattattattattcgcgtgttttatcgctttaatagaaatagggcgtta 28887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 21829150 - 21828987
Alignment:
Q  83 catggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt-ttatatatgcatacatgtttggtttctgttg--aagacgta 179  Q
    ||||||||||||||||||||||  ||||| ||||||  ||||||| |||||||  ||| ||||||||||||   ||||||  || || ||  |||||| |    
T  21829150 catggcatgtatattttggagacatatgaattatatttgctgcgattgttgaaattttcttatatatgcatgt-tgtttgaattttgatgtgaagacgca 21829052  T
Q  180 gcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||| ||||||| ||||| |   |||| ||||||| |||||||||||||||||| |||||||||    
T  21829051 gcgtccatttcttgaatatatcctttattcgtgtgtattattgctttaatagaaacagggcgtta 21828987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 22056065 - 22056133
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||||| |||||| ||  ||||||||||||||||||||||||||||||||||    
T  22056065 gtagcatctatttcttgaatattt-tattattcgcatgttttattgctttaatagaaatagggcgttaca 22056133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 32949034 - 32948965
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  32949034 gtagcgtctatttcttgaatatatgaattattcgtatgtttaattgctttaatagaaatagggcgttaca 32948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 33628768 - 33628834
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||||||||||| ||||| | | |||| | |||||||||| |||||||||||||||||||||||    
T  33628768 tagcgtctatttcttgaatatatgttttattcatgtgttttatcgctttaatagaaatagggcgtta 33628834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 430759 - 430686
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| |||||||    
T  430759 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttacat 430686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 12030090 - 12030158
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||   ||||||| |||||| ||  ||||||||||||||||||||||||||||||||||    
T  12030090 gtagcgtctatttcaagaatattt-tattattcgcatgttttattgctttaatagaaatagggcgttaca 12030158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 11339163 - 11339227
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| | |||||||||||||||  |||||||| ||  ||||||||||||||||||||||||||    
T  11339163 gacgtaacctctatttcttaaataaatatattattcgcatgttttattgctttaatagaaatagg 11339227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 13793098 - 13793026
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| |   |||| || | ||||||| |||||||||||||||||||||||||    
T  13793098 gacgtagcgtctatttcttgaatatatgctttattcgcgagttttatggctttaatagaaatagggcgttaca 13793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 22881528 - 22881440
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatat 96  Q
    ||||||| |||||||  |||||||||  ||| ||||||||||||||||||||| |||| |||  |||||| || | |||||||||||||    
T  22881528 tggatttgtttatgtaatggagattttcccacttgtcgggatttggagaatttttatgttgagatatttttatattatggcatgtatat 22881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 5453535 - 5453614
Alignment:
Q  168 gttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||| ||||||||||||||||||| |||| || | |||| |  ||||||||| ||||||||||||||| || |||||||    
T  5453535 gttgacgacgtagcgtctatttcttgaataattgtcttattctcgtgttttatcgctttaatagaaatatggtgttacat 5453614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 25002786 - 25002717
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  |||||||||||| |||||||| ||||||||||||    
T  25002786 gtagcgactatttcttgaatattattattattcgcatgttttattgctgtaatagaagtagggcgttaca 25002717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 18533106 - 18533168
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||| ||||||| |||||| |   |||||||||||||||||||||||| |||||||||    
T  18533106 tctatttcttgaatattt-tattattcacatgttttattgctttaatagaaataaggcgttaca 18533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 25945103 - 25945174
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||| ||||||||||||||| || |||||| ||  || || |||||||||||||||||||| ||||||||    
T  25945103 cgtagcctctatttcttaaataattgtattattcgcatgattaattgctttaatagaaataggagcgttaca 25945174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 2029786 - 2029724
Alignment:
Q  184 ctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||| | ||||||    
T  2029786 ctatttcttgaatattattattattcgcatgttttattgctttaatagaaatagtgtgttaca 2029724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 10780669 - 10780739
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||| ||||||||    
T  10780669 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagagcgttaca 10780739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 11340233 - 11340163
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||||||||  | |||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  11340233 cgtagcctctatttcttaaataaatgtattattcgcatgtttaattgctttaatagaagtagggtgttaca 11340163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 18226367 - 18226445
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||||||||  || ||||||||| |||| || || ||| |||||||||||| |||||||||||| || | ||||||||    
T  18226367 ttgaagacgtgacgactatttcttgaataattgtaatattcgtgtgttttatcgctttaatagaagtatgacgttacat 18226445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 7527064 - 7526999
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  7527064 cgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaattagggcgttaca 7526999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17907442 - 17907373
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  17907442 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 17907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 18780602 - 18780671
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  18780602 gtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 18780671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 32968400 - 32968469
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| | ||| | |||||| ||  |||||||| ||||||||||||||| || ||||||    
T  32968400 gtagcgtctatttcttgagtatatgtattattcgcatgttttatcgctttaatagaaataaggtgttaca 32968469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 111518 - 111590
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  111518 gacgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggtgttaca 111590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19860285 - 19860213
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| ||||||||||| ||||  |   |||| | ||||||| |||||||||||||||||| |||||||||    
T  19860285 gacgtagtgtctatttcttgaataaatgccttattcatgtgtttaattgctttaatagaaataaggcgttaca 19860213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 21075842 - 21075906
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||||||| ||||  | |||||| ||  |||||||||||||||||||||||||| ||||||||    
T  21075842 tctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaataggagcgttaca 21075906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 21228589 - 21228661
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||||| ||||| | ||||||  | ||||||||  |||||||| |||||||||| |||||    
T  21228589 gacgtaacgtctatttcttgaatatatgtattatttgcgtgttttaccgctttaatcgaaatagggcattaca 21228661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 25424316 - 25424240
Alignment:
Q  172 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||||| | |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||| ||||||||    
T  25424316 aagacgtaacctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggtgttacatt 25424240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 19435 - 19231
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||| ||||||||  ||||    
T  19435 tgtcgggatttggagaatttatatgatgatgtattttgatctcatgacatgtagactttggagatgtatgatctatatccgctgcaactgttgataattt 19336  T
Q  141 ttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggc 240  Q
    ||||||||  ||   ||||||| || |||||| ||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| | |    
T  19335 ttatatataaat-gttgtttggattttgttgatgacatagcgtctatttcttgaatatttatattattcgtgtgttttatcgctttaatagaaataagcc 19237  T
Q  241 gttaca 246  Q
    ||||||    
T  19236 gttaca 19231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 99014 - 99225
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||     
T  99014 ccatatgtcgggatttggagaatttatataatgatgtatattgatctcatgacatgtatactttggagatgtatgacttatatccgctgcgactgttgag 99113  T
Q  136 gatttttatatatgcatacatgtttg-gtttctgt-tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaa 233  Q
     ||||||||||||||||   ||||||  ||| | | ||||||||||||||||||||||| |||||||||||||| |  |||| |||| ||||||||||||    
T  99114 aatttttatatatgcat-gttgtttgaatttttatgtgaagacgtagcgtctatttcttgaatatttatattattcacgtgtattatcgctttaatagaa 99212  T
Q  234 atagggcgttaca 246  Q
    |||||||||||||    
T  99213 atagggcgttaca 99225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 256842 - 257073
Alignment:
Q  15 atttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatt 113  Q
    ||||||||| ||||||||| ||| || | | |||||||| ||| ||||||| || || ||| ||||||| ||| ||||||||| || |||||||||||||    
T  256842 atttatgttatggagattttgcccatatattgggatttgaagattttatataatcatttatattgatcttatgacatgtatatcttagagatgtatgatt 256941  T
Q  114 tatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgt 213  Q
    |||||| |||||||||||||| ||  |||||||||||||  ||  ||| |   ||||||| || ||||||||||||||||||||| | | |||| |||||    
T  256942 tatatctgctgcgactgttgatgaactttatatatgcat--attgttgatagttgttgaaaacatagcgtctatttcttaaatatatgttttattcgtgt 257039  T
Q  214 gttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||  ||| ||||||||||| | |||||||    
T  257040 gttttatcacttgaatagaaatagagtgttacat 257073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 7186 - 6976
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattt-atatccgctgcgactgttga 134  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||| |||||||||||||    
T  7186 ccatatgtcggaatttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttcatatccactgcgactgttga 7087  T
Q  135 agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaa 234  Q
    |  |||||||||||||||  ||||||||||| || |||||| |||||||||||||||| ||||| |   |||| || ||||||||| |||||||||||||    
T  7086 aattttttatatatgcatgtatgtttggttt-tgctgaagatgtagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaa 6988  T
Q  235 tagggcgttaca 246  Q
    ||||| ||||||    
T  6987 tagggtgttaca 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 4815 - 5025
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||| | |||||||||||||||| |||||||||||| || |||||     
T  4815 ccatatgtcgggatttggagaatttttatgatgttgtattttgatttcatggcatgtagactttggagatgtatgatctatatccgctgcaaccgttgag 4914  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     ||||||||||||||||     |||||||| |||||||||||||||||||||||||| ||||  | | |||| || ||||||||| ||||||||||||||    
T  4915 aatttttatatatgcatgttgttttggtttttgttgaagacgtagcgtctatttcttgaataaatgttttattcgcgtgttttatcgctttaatagaaat 5014  T
Q  236 agggcgttaca 246  Q
    |||||||||||    
T  5015 agggcgttaca 5025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 23194 - 23384
Alignment:
Q  48 atttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatata 147  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  23194 atttggagaatttatatgatgatgtattttgatcttatgacatgtatattttggagatatatgatttatatccactgcgactgttgaaattttttatata 23293  T
Q  148 tgcatacatgtttggtttctgttgaagacgt-agcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||  ||||||||||| || ||||||||| |||||||||||||| ||||| |   |||| || ||||||||| |||||||||||||||||    
T  23294 tgcatgtatgtttggttt-tgctgaagacgtaagcgtctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaatagg 23384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 73357 - 73567
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  73357 ccatatgtcgggacttggagaatttatatgatgatgtattttgatctcatggcatgtatactttggagatgtatgatttatatccgctgcgattgttgag 73456  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     ||||||||||||||||     |||||||| | | | ||||||||| |||||||||| ||||  |   |||| || ||||||||| ||||||||||||||    
T  73457 aatttttatatatgcatgttgatttggtttttatcgtagacgtagcatctatttcttgaataaatgctttattcgcgtgttttatcgctttaatagaaat 73556  T
Q  236 agggcgttaca 246  Q
    | ||| |||||    
T  73557 atggcattaca 73567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 2159 - 2401
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattttgg 101  Q
    |||| |||||||||| ||||||  |||||||  ||||||||||||| || ||||| || |||| |||||||||| |||| |||| ||||||||  ||||     
T  2159 tattttggatttattcatgttg--gagatttacccatttgtcgggacttagagaacttttatgttgatgtatttgtgatatcatagcatgtatgctttga 2256  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatt 199  Q
    |  | | || |||||| |||||| ||||||||| |||||||||| ||||| |    ||||| || ||  |||| |||||||||||||||||| ||||||     
T  2257 at-tatttggtttatacccgctgtgactgttga-gatttttatacatgcagatcgttttggattttgaattgatgacgtagcgtctatttctcaaatata 2354  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |   |||| || ||||||||| |||||||||||||||||| ||||||    
T  2355 tgccttattcgcgtgttttatcgctttaatagaaatagggtgttaca 2401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 99283 - 99037
Alignment:
Q  1 tttattctggatt-tatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatatttt 99  Q
    |||||| |||||| |||||||||| |||||||||  ||| |||||||||||| |||||||| ||||||| | ||||| | | |||||||||||||| |||    
T  99283 tttattttggattatatttatgttatggagatttacccaattgtcgggatttagagaatttttatgatgttatatttcgttatcatggcatgtatacttt 99184  T
Q  100 ggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
     ||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||     ||||| || | |||| || || ||||||||||||| ||||||    
T  99183 tgaggtgtatgatttatatccgctgcaactgttgagaatttttatacatgcatgttattttggatttttttgatgatgtggcgtctatttcttgaatatt 99084  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||    
T  99083 tatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 99037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 217982 - 218055
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttacatt 248  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| |||||||||||||||||||| ||||||||||    
T  217982 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaataggagcgttacatt 218055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 10384 - 10175
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||     
T  10384 ccatatgttgggatttggagaattta-atgatgatgtattttgatctcatggcatgtagactttggagatgtatgatctatatccgctgcgactgttgag 10286  T
Q  136 gatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaat 235  Q
     | ||||||||||||||     ||| |||| ||||||| ||||||| |||||||||| ||||| |   |||| || ||||||||| ||||||||||||||    
T  10285 aacttttatatatgcatgttgattttgtttttgttgaatacgtagcatctatttcttgaatatatgctttattcgcgtgttttatcgctttaatagaaat 10186  T
Q  236 agggcgttaca 246  Q
    | |||||||||    
T  10185 atggcgttaca 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 45 - 247
Target Start/End: Original strand, 247879 - 248081
Alignment:
Q  45 gggatttggagaatttatatgatgatgtattt--tgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattttt 142  Q
    |||||||||||| ||||||||||||| ||| |  ||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||  | ||||    
T  247879 gggatttggagattttatatgatgatatatatattggacttatgacatgtatattttggagatgtatgatttatattcgctgcgactgttgagaaatttt 247978  T
Q  143 atatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgt 242  Q
    ||||||||||   ||||||  || |||||||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||| ||||| ||    
T  247979 atatatgcatgt-tgtttgaatt-tgttgaagacgtagcgtctatttcttgaatatttatattattcgtgtgtattatcgctttaatagaagtagggtgt 248076  T
Q  243 tacat 247  Q
    |||||    
T  248077 tacat 248081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 94; Significance: 9e-46; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 84558 - 84314
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    |||||| || |||||||||  ||||||||||||| |||||||||||||||||||||| || ||||||| ||||| || || ||||||| ||||||  ||     
T  84558 tttattttgaatttatttacattgtggagatttgcccatttgtcgggatttggagaacttttatgatgttgtatcttaatttcatggcgtgtatacattt 84459  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatattt 200  Q
    ||| ||||||||||||||||||| | ||| ||||  |||||||||||||||||    |||||||| | |||| |||| | ||||||||| || |||||||    
T  84458 gaggtgtatgatttatatccgctacaacttttgagaatttttatatatgcatatcaatttggttttttttgacgacgcaacgtctattt-ttgaatattt 84360  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| |  || |||||| |||||||||||||||||||||||||    
T  84359 atattattcacgtattttatcgctttaatagaaatagggcgttaca 84314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 25687 - 25536
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttg 100  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||  |||     
T  25687 tttattctggatttatttacgttgtggagatttacccaattgtcaggatttggagaatttttatgatgatgtattttgacctcatggcatgtatgctttt 25588  T
Q  101 gagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcat 152  Q
    ||  |||||| ||||||| || ||| ||||||||  ||||||||| ||||||    
T  25587 gaagtgtatggtttatattcgttgctactgttgagaatttttatacatgcat 25536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 331380 - 331442
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    |||||||| |||||||||| ||||  | |||||| ||| ||||| ||||||||||||||||||    
T  331380 gacgtagcctctatttcttgaataaatgtattattcgtatgtttaattgctttaatagaaata 331442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 11086 - 11285
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||| |||  || |||||| |||||||||| ||| ||||||||  ||||||||| ||    
T  11086 tttggagaatttttatgatgatgtattttgatatcatgacatgtatactttttaggtgtatggtttatatccgttgcaactgttgagaatttttatacat 11185  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||||    |||||| || |||||| ||||| |  |||||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  11186 gcatgttggtttggattttgttgatgacgtggaatctattacttaaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttacatt 11285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 7638 - 7702
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  7638 gacgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 7702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 3078 - 3309
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| |||||||||||| ||| |||||  || ||||||||||||||| ||||| |||||||| ||| ||| ||| || ||||    
T  3078 ttatgttttggagatttacccaattgtcgggattttggaaaattttgatcatgatgtattttgatatcatgacatgtatacttttgaggtgtctggttta 3177  T
Q  116 tatccgctgcgactgttga-agatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtg 214  Q
    ||||||||||||||||||| || || ||||| ||||||     ||||| || |||||| ||||||||||||||||||| |||||||||||||| || |||    
T  3178 tatccgctgcgactgttgagagtttcttatacatgcatgttgttttggattttgttgatgacgtagcgtctatttctttaatatttatattattcgcgtg 3277  T
Q  215 ttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||| ||||||||||||||||    
T  3278 ttttatcgctttaatggaaatagggcgttaca 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 236
Target Start/End: Original strand, 45654 - 45854
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||||| || ||| ||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||  |||||| |||||||||||||     
T  45654 ccatatgtcgagacttgaagaatttatatgatgatttattttgatctcatggcatgtagactttgaagatgtatgatccatatcctctgcgactgttgag 45753  T
Q  136 gatttttatatatgcatacatgtttgg-tttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaa 234  Q
     || |||||||||||||   ||||||| ||| |||||| |||||||||||||||| || |||||||||||||| || ||||||||| | ||||||| |||    
T  45754 aatatttatatatgcat-gttgtttggatttatgttgatgacgtagcgtctattttttgaatatttatattattcgcgtgttttatcgttttaatataaa 45852  T
Q  235 ta 236  Q
    ||    
T  45853 ta 45854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 5479 - 5236
Alignment:
Q  3 tattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    ||||||||||||||| ||||  |||||| |||| |||||||||||| ||| |||| |||||||||| |||||| ||||||| ||| ||||||||||||||    
T  5479 tattctggatttatt-atgtgttggagaatttgcccatttgtcgggttttagagattttatatgataatgtatattgatcttatgacatgtatattttgg 5381  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagac-gtagcgtctatttcttaaatattt 200  Q
    ||||||||||||||||||  |||||||||||||  | ||||||||||||||   || |||   | |||||||||| |||||||||||||||| ||||| |    
T  5380 agatgtatgatttatatcatctgcgactgttgataaattttatatatgcat-gttggttgaaatttgttgaagacggtagcgtctatttcttgaatatat 5282  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
       |||| || |||| || | | |||||||||||||||||||||||    
T  5281 gctttattcgcgtgtattttcgttttaatagaaatagggcgttaca 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 3726 - 3798
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  |||||||||||||| |||||||||||| ||||||    
T  3726 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttgatagaaatagggtgttaca 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2007 - 2254
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgta----tat 96  Q
    |||||| |||||||||||||  |||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    | |    
T  2007 tttattttggatttatttatactgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatggcatgtatgttttt 2105  T
Q  97 tttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaa 195  Q
    ||| ||  |||||| |||||||||||| | ||||||||  |||||||||||||| |   ||||||| || || |||| |||||||| |||||||||| ||    
T  2106 ttttgaagtgtatggtttatatccgctacaactgttgagaatttttatatatgcct-gttgtttggattttgtttgatgacgtagcatctatttcttgaa 2204  T
Q  196 tatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || |||||| |  ||||||||| |||||||||||||||||| ||||||    
T  2205 ta-ttctattattcacgtgttttatcgctttaatagaaatagggtgttaca 2254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 246
Target Start/End: Original strand, 14159 - 14391
Alignment:
Q  22 ttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgta---------tattttggagatgtatgat 112  Q
    ||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||         | ||||  |  |||||| |    
T  14159 ttgtggagatttacccatttgtcgggatt-ggagaatttttatgatgatgtattttgacctcatgacatgtatgtttttttttttttttaattgtatggt 14257  T
Q  113 ttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg-ttgaagacgtagcgtctatttcttaaatatttatattatccgt 211  Q
    ||||||||||||| ||||||||  |||||||||||||| |   ||||||| || || |||| ||||  ||||||||||||| ||||||| |||||| |      
T  14258 ttatatccgctgcaactgttgagaatttttatatatgcct-gttgtttggattttgtttgatgacgaggcgtctatttcttgaatatttctattattcac 14356  T
Q  212 gtgttttattgctttaatagaaatagggcgttaca 246  Q
     |||||||| |||||||||||| ||||||||||||    
T  14357 atgttttatcgctttaatagaattagggcgttaca 14391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 3070 - 2833
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||| |||||||||   |||||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||  |||| || ||     
T  3070 tggatttattcatgtt-tggagatttacgcatttgtcgggacttggagaatttttatgattatgtattttgatatcatggcatgtatgctttgaag-tga 2973  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatta 206  Q
    ||| |||||||||||||||| ||||||  ||||||||| ||||||     ||||| || ||| ||| |||||| | |||||||||| ||||| | |||||    
T  2972 atggtttatatccgctgcgattgttgagaatttttatacatgcatgttgttttggattttgtatgatgacgtatcatctatttcttgaatatatgtatta 2873  T
Q  207 tccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | || ||||||||| |||||||| ||||| ||||||||||    
T  2872 ttcgcgtgttttatcgctttaatcgaaatggggcgttaca 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 76; Significance: 5e-35; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 2621 - 2377
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    ||||| ||||||||||||||| ||||||||| ||| |||||||||| |||||||| ||||| |   ||||||| ||||||| ||| |||||||| |||||    
T  2621 tattcaggatttatttatgttatggagattttgcctatttgtcgggttttggagattttatttatggatgtatgttgatcttatgacatgtatactttgg 2522  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatt 199  Q
     |||||| || ||||||||||||||||||||| ||| ||||||||||||||   ||||||  || ||   |||||||||||| |||||||||| ||||      
T  2521 tgatgtaggacttatatccgctgcgactgttg-agaattttatatatgcat-gttgtttgaattttgatgtgaagacgtagcatctatttcttgaataaa 2424  T
Q  200 tatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | | |||| || |||| |||| ||||||||||||||||| |||||||    
T  2423 tgttttattcgcgtgtattatcgctttaatagaaataggacgttaca 2377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 7675 - 7607
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||||| |||||| ||  |||||||||| |||||||||||||||||||||||    
T  7675 gtagcgtctatttcttgaatattt-tattattcgcatgttttattgttttaatagaaatagggcgttaca 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 51424 - 51306
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||||  ||||||||||||| ||| |||| || |||| | ||||| ||||||| ||||| |||||||  |||| || | |||| |||||||||| |    
T  51424 tggagatttacccatttgtcgggacttgaagaacttttatgtttatgtatttttgatatcatgacatgtatgctttgaag-tatatggtttatatccgtt 51326  T
Q  124 gcgactgttgaagatttttat 144  Q
    |||||||| | ||||||||||    
T  51325 gcgactgtag-agatttttat 51306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 11453 - 11291
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaa 135  Q
    |||| ||||||||||||||| |||| | |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||     
T  11453 ccatatgtcgggatttggaggatttttgtgatgatgcatattgatctcatggcatgtatactttggagatgtatgatttatatccgctgcggctattgag 11354  T
Q  136 g-atttttatatatgcatacatgtt--tggtttctgttgaagacgtagcgtctatttcttaaatatt 199  Q
    | |||||||||||||    ||||||  || | | |||||||||||||||||||||||||| ||||||    
T  11353 gaatttttatatatg----catgttgatgttatttgttgaagacgtagcgtctatttcttgaatatt 11291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 6948 - 7168
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctg 124  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||  ||| ||| | || | |||||||||||||    
T  6948 tggagatttacccatttgtcgggatttggagaatttttatgatgatgta-tttgatatcatagcatgtatgcttttgagttataaggtttatatccgctg 7046  T
Q  125 cgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgct 224  Q
    | ||||||||| |  |||||| ||||||     ||||  ||  ||||| || |||||||||||||||| |||||||||||||| || || |||||| |||    
T  7047 caactgttgaaaaaatttatacatgcatgttgttttgcatttcgttgatgaagtagcgtctatttcttgaatatttatattattcgcgtattttatcgct 7146  T
Q  225 ttaatagaaatagggcgttaca 246  Q
    | ||||||||||||| ||||||    
T  7147 taaatagaaatagggagttaca 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 248
Target Start/End: Original strand, 3771 - 3967
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||| ||| ||| |||||| |||||||| ||||| ||||||||  ||||||||| ||    
T  3771 tttggagaattt-tatgatgatgtattc-gatctcatgacatgtatacttttgaggtgtatggtttatatctgctgcaactgttgagaatttttatacat 3868  T
Q  149 gcatacatgttt-ggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||   ||||| || || |||||| |||||  |||||||||||| |||||| ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  3869 gcatgt-tgtttaggattttgttgatgacgtgacgtctatttcttgaatatt-atattattcgcgtgttttatcgctttaatagaaatagggcgttacat 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 36007 - 35814
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||| ||||  ||||||||| |||||||| ||| ||| |||||| |||||||||||||| ||||||||  ||||||||| ||    
T  36007 tttggagaattt-tatgatgat-tattc-gatctcatgtcatgtatacttttgaggtgtatggtttatatccgctgcaactgttgagaatttttatacat 35911  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||     ||||| || |||||| || || ||||||||||||| |||| ||||||||| || ||||||||| |||||||||||||||||||||||||    
T  35910 gcatgttgttttggattttgttgatgatgtggcgtctatttcttgaata-ttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 35814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 69; Significance: 7e-31; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 106657 - 106894
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||||||||||  || ||||  ||||||||||||| | |||||| || |||||  ||||||||| ||| ||||||||||||||||||| || |     
T  106657 tggatttatttatgttg--gatatttacccatttgtcgggactcggagaactt-tatgacaatgtatttttgatatcatggcatgtatattttgaag-ta 106752  T
Q  107 tatgatttata-tccgctgcgactgttgaagatttttatatatgcatacatgtttggt-ttctgt-tgaagacgtagcgtctatttcttaaatatttata 203  Q
    |||| |||||| ||||||||||||||||| |||||| ||||||||||   |||||||  || ||| ||| ||||||||||||||||||| ||||||  ||    
T  106753 tatggtttataatccgctgcgactgttga-gatttt-atatatgcatgattgtttggaattttgtatgatgacgtagcgtctatttcttgaatattatta 106850  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||| ||  |||||||| ||||||||||||||||||||||||||    
T  106851 ttattcgcttgttttatcgctttaatagaaatagggcgttacat 106894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 122050 - 122231
Alignment:
Q  62 tatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtt-- 159  Q
    ||||||||| ||| ||||||| | | ||||||||||| |||||||||||| || ||||| |||||||||||||  | ||||||||||||||    |||      
T  122050 tatgatgatatatattgatcttaggacatgtatattt-ggagatgtatgaattgtatccactgcgactgttgagaaattttatatatgcat----gttga 122144  T
Q  160 tggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || | | |  | ||||||||||||||||||||| ||||| | |  ||| || ||||||||| |||||||||||||||||||||||||    
T  122145 tgttatttactaaagacgtagcgtctatttcttgaatatatgttctattcgcgtgttttatcgctttaatagaaatagggcgttaca 122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 102010 - 102080
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||||||||| |||||   |||||| ||  ||||||||  |||||||||||||||||||||||||    
T  102010 gtagcgtctatttcttgaatataattattattcgcatgttttatccctttaatagaaatagggcgttacat 102080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 110590 - 110659
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  110590 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 110659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 78 - 246
Target Start/End: Complemental strand, 104041 - 103876
Alignment:
Q  78 gatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacg 177  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||| ||||||||  ||||||||| ||||||     ||||| || | |||||||||    
T  104041 gatctcatggcatgtatattttg-aggtgtatggtt-atatccgctgcaactgttgagaatttttatacatgcatgttgttttggattttattgaagacg 103944  T
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    | ||||||||||||| |||||| ||||||| || ||||||||| |||||||||||||||||||||||||    
T  103943 tggcgtctatttcttgaatatt-atattattcgcgtgttttatcgctttaatagaaatagggcgttaca 103876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 99233 - 99474
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttgg 101  Q
    |||| |||||||||| |||||   |||||||  ||||||||| ||| |||||||| || |||| ||| ||| ||||||| | |||||||||||  ||||     
T  99233 tattttggatttattcatgtta--gagatttacccatttgtcaggacttggagaacttttatgttgacgtacttttgatattatggcatgtatgctttga 99330  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatattt 200  Q
    || | |||| ||||||||||||||||||||||| |||||||||| ||||||     ||||| || |||| || ||||||||||||||||||| ||||| |    
T  99331 ag-tatatggtttatatccgctgcgactgttga-gatttttatacatgcatgttgttttggattttgtttgatgacgtagcgtctatttcttgaatatat 99428  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     |||||| || ||||||||| ||||||||||||||||| |||||||    
T  99429 gtattattcgcgtgttttatcgctttaatagaaataggacgttaca 99474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 31688 - 31928
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggag--at 105  Q
    |||||||||| ||||| |||||||||  ||||||||||||| |||||||| || |||||| |||||| ||||| | ||||||||||| ||||| ||   |    
T  31688 tggatttattcatgtt-tggagatttacccatttgtcgggacttggagaacttttatgattatgtatcttgatataatggcatgtatgttttgaagtatt 31786  T
Q  106 gtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgttt--ggtttctg-ttgaagacgtagcgtctatttcttaaatatttat 202  Q
     |||||||||||||||||||||||| || ||||||||||  ||||||   |||||  |  || || |||| |||||||||| || ||||| ||||| | |    
T  31787 atatgatttatatccgctgcgactgatg-agatttttatgcatgcat-gttgttttcgaattttgtttgatgacgtagcgtttaattcttgaatatattt 31884  T
Q  203 attatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| || |||||||||||||||||||||| ||||||||||||    
T  31885 attattcgcgtgttttattgctttaatagaattagggcgttaca 31928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 703 - 464
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggattt-ggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||| |||||||||  ||| |||||||||||| |||||||||  |||||||||||| ||||  || | ||||||||  ||| ||  |     
T  703 tggatttatt-atgttttggagatttacccaattgtcgggattttggagaattttgatgatgatgtatgttgacatcgtagcatgtatgcttttgaatta 605  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||| |||||||||||||| ||||||||  |  |||||||||||||     ||||| || |||| || || |||||||||||||||| ||||||||||||    
T  604 tatggtttatatccgctgcaactgttgagaacgtttatatatgcatgttgttttggattttgtttgatgatgtagcgtctatttcttcaatatttatatt 505  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||  | ||||||||| |||||||||||||||| ||||||||    
T  504 atttgcgtgttttatcgctttaatagaaatagtgcgttaca 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 22773 - 22845
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    ||||| |||||||||| | |||||||||||||| || |||||||||  |||||||||||||||||| ||||||    
T  22773 acgtaacgtctatttcgtgaatatttatattattcgcgtgttttatcactttaatagaaatagggctttacat 22845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 22599 - 22723
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttgg 101  Q
    |||| ||||||| |||||||| ||| ||||| ||| |||||||||| |||| ||| ||||| |  |||| ||||||||  | ||| |||||||| |||||    
T  22599 tattatggatttgtttatgttatggggattttgcctatttgtcgggttttgaagattttatgtattgatatattttgagtttatgacatgtatactttgg 22698  T
Q  102 agatgtatgatttatatccgctgcg 126  Q
    ||||||||| | |||||||| ||||    
T  22699 agatgtatgctatatatccgttgcg 22723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 26022 - 26141
Alignment:
Q  17 ttatgttgtggagatttggccatttgtcgggatttggagaatttat-atgatgatgtattttgatctcatggcatgtatattttggagatgtatgattta 115  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| ||| ||| |||||| ||||    
T  26022 ttatgttttggagatttacccaattgtcgggatttggagaattttttatgatgatgtattttgatatcatgacatgtatacttttgaggtgtatggttta 26121  T
Q  116 tatccgctgcgactgttgaa 135  Q
    |||| |||||||||||||||    
T  26122 tatctgctgcgactgttgaa 26141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 26144 - 26302
Alignment:
Q  91 gtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttc 190  Q
    ||||| ||| ||| |||||| |||||||| ||||||||||||||| |||| |||| ||||||     ||||| || |||||| || ||  ||||||||||    
T  26144 gtatacttttgaggtgtatggtttatatctgctgcgactgttgaaaatttgtatacatgcatgttgttttggattttgttgatgatgtgacgtctatttc 26243  T
Q  191 ttaaatatttatattatccgt-gtgttttattgctttaatagaaatagggcgttacatt 248  Q
    || |||||||||||||| ||  ||||||||| |||||||||||||||||| ||||||||    
T  26244 ttgaatatttatattattcggcgtgttttatcgctttaatagaaatagggtgttacatt 26302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3448 - 3538
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcg 126  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||||    
T  3448 ccatatgtcgggatttgaagaatttatataatgatgtattttgatctcatgacatgtatactttggagatgtatgttatatatccgctgcg 3538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 3587 - 3659
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| |||| |||||||||  |  |||||||| |||||||||||||||||||||||||    
T  3587 gacgtagcgtctatttcttgaataattatattattagcatgttttatcgctttaatagaaatagggcgttaca 3659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 20230 - 20036
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatat 148  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||| ||| ||| ||||||||||||||  ||||| ||||||||  ||||||||| ||    
T  20230 tttggagaattt-tatgatgatgtattc-gatctcatgtcatgtatacttttgaggtgtatgatttatatttgctgcaactgttgagaatttttatacat 20133  T
Q  149 gcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||     ||||| || |||| | |||||  |||||||||||| |||| ||||||||| || || |||||| ||||||||||||||||||| |||||    
T  20132 gcatgttgttttggattttgttcatgacgtgacgtctatttcttgaata-ttatattattcgcgttttttatcgctttaatagaaatagggcattaca 20036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 34976 - 35181
Alignment:
Q  41 tgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagattt 140  Q
    |||| ||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||||  ||||| |||||| |||||||| ||||| ||||||    
T  34976 tgtcaggatttgaagaatttttatgatgatgtattttgatatcatggcatgtgtattttggagacatatgaattatattcgctgcgattgttg-agattt 35074  T
Q  141 --ttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
      ||||||||||||   ||||||  || ||   ||||||||||||||| ||||||| ||||| |   |||| | ||||| |||| |||||||||||||||    
T  35075 tcttatatatgcat-gttgtttgaattttgatgtgaagacgtagcgtccatttcttgaatatatgctttattcatgtgtattatcgctttaatagaaata 35173  T
Q  237 gggcgtta 244  Q
    | ||||||    
T  35174 gagcgtta 35181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 29236 - 28994
Alignment:
Q  3 tattctggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttgg 101  Q
    |||| |||||||||| ||||||  |||||||  |||| |||||||| |||||||| || |||| ||||||||||| ||| |||||||||||||  ||||     
T  29236 tattttggatttattcatgttg--gagatttacccatgtgtcgggacttggagaacttttatgttgatgtatttttgatatcatggcatgtatcctttga 29139  T
Q  102 agatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctg-ttgaagacgtagcgtctatttcttaaatat 198  Q
    || | ||||||||||||||||||||||||||| ||||||||||  ||||||   ||  ||||  || || |||| ||||||||||||||||||| |||||    
T  29138 ag-tatatgatttatatccgctgcgactgttg-agatttttatgcatgcat-gttgaatttgaattttgtttgatgacgtagcgtctatttcttgaatat 29042  T
Q  199 ttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     | | |||| || ||||||||   ||||||||||||||||||||||||    
T  29041 atgtgttattcgcgtgttttacccctttaatagaaatagggcgttaca 28994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 123517 - 123612
Alignment:
Q  56 aatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgca 151  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||| ||| ||||  |||| ||||||||||    
T  123517 aatttttatgatgatgtattttgatctcatgacatgtatacttttgaggtgtatgatttatatctgctgcaactattgagaatttatatatatgca 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 25684 - 25900
Alignment:
Q  36 ccatttgtcgggatttggagaatttat--atgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttg 133  Q
    ||||||||||||| ||||||||||| |  ||||| |||||||||||| |||||||||||||  |||| || | |||| ||||||||   || ||||||||    
T  25684 ccatttgtcgggacttggagaatttttttatgattatgtattttgatatcatggcatgtatgctttgaag-tatatggtttatatcaattgtgactgttg 25782  T
Q  134 aagatttttatatatgcatacatgtttggtttctgt--tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatag 231  Q
    |  ||||||||| |||||      |||||||| |||  ||| ||||||||||||||||||| ||||| | |||||| ||||||||||||  ||||| |||    
T  25783 agaatttttatacatgcacgttgttttggtttttgtattgatgacgtagcgtctatttcttgaatatatgtattattcgtgtgttttatcactttattag 25882  T
Q  232 aaatagggcgttacattc 249  Q
    ||||||||| ||||||||    
T  25883 aaatagggcattacattc 25900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 1282 - 1210
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  1282 gacgtagcgtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 1362 - 1293
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 94  Q
    |||||||||  ||| ||||||||| |||||||| || |||| |||||||||||||| |||||||||||||    
T  1362 tggagatttacccacttgtcgggacttggagaacttttatgttgatgtattttgatatcatggcatgtat 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 3995 - 3854
Alignment:
Q  103 gatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt--tgaagacgtagcgtctatttcttaaatattt 200  Q
    ||||||||| ||||||||| |||||||||||| || ||||||||||||||   |||||| |||  |   ||||||| ||||||||||||||| ||||||     
T  3995 gatgtatgacttatatccgttgcgactgttgatgaattttatatatgcatgt-tgtttgattttggaagtgaagacatagcgtctatttcttgaatatt- 3898  T
Q  201 atattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||    
T  3897 atattattcgtatgttttatcgctttaatagaaatagggcgtta 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 199487 - 199626
Alignment:
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgtt-gaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||| |||||||||||||||||||||||  ||||||||| ||||||     ||||| || |||| || ||||||||||||||||||| ||||| |||||     
T  199487 tatgttttatatccgctgcgactgttgac-atttttatacatgcatgttgttttggattttgtttgatgacgtagcgtctatttcttgaatatatatata 199585  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || ||||||||| |||||||||||||||||||||||||    
T  199586 attcgcgtgttttatcgctttaatagaaatagggcgttaca 199626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 4573 - 4455
Alignment:
Q  36 ccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtata-ttttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| |||||||||||||||| ||||||||  ||||||| ||||| |||||||||||||| |||||||  |||||| | |||||||||||||||| ||||    
T  4573 ccatatgtcgggatttggagattttatatggcgatgtatgttgatttcatggcatgtatatttttggaagtgtatgttatatatccgctgcgactattga 4474  T
Q  135 -agatttttatatatgcat 152  Q
     | ||||||||||||||||    
T  4473 gaaatttttatatatgcat 4455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 246
Target Start/End: Original strand, 34237 - 34428
Alignment:
Q  55 gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttgaagatttttatatatgcatac 154  Q
    |||||| |||| |||||||| ||||||| |||  |||||||||||| |||||||||| ||||||||||||| | | ||||  | ||||||||||||||      
T  34237 gaatttttatgttgatgtatattgatcttatgatatgtatattttgaagatgtatgacttatatccgctgcaagt-ttgagaaattttatatatgcatgt 34335  T
Q  155 atgtttggtttctgttg--aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
     ||||||   |  | ||  |||| |||| ||||||||||| |||||||||||||| || |||| |||| |||||||||||||||||||||||||    
T  34336 -tgtttgaaattagatgtgaagatgtagggtctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcgttaca 34428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 49594 - 49388
Alignment:
Q  36 ccatttgtcgggatttgga-gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| ||||||||||| || |||||| | ||||||||||||||||| ||||||||| | |||||||||||  ||||| |||||||||||||||||||||     
T  49594 ccatatgtcgggattttgaagaatttttctgatgatgtattttgatatcatggcatatgtattttggagacatatgaattatatccgctgcgactgttg- 49496  T
Q  135 agattt--ttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaata 230  Q
    ||||||  ||||||||||||   ||||||  || ||   ||||||| ||| ||||||||||| ||||| |   |||| || |||| |||| |||||||||    
T  49495 agattttcttatatatgcat-gttgtttgaattttgatgtgaagacatagggtctatttcttgaatatatgctttattcgcgtgtattatcgctttaata 49397  T
Q  231 gaaataggg 239  Q
    |||||||||    
T  49396 gaaataggg 49388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 54125 - 53919
Alignment:
Q  36 ccatttgtcgggatttgga-gaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgctgcgactgttga 134  Q
    |||| ||||||||||| || |||||| | ||||||||||||||||| ||||||||| | |||||||||||  ||||| |||||||||||||||||||||     
T  54125 ccatatgtcgggattttgaagaatttttctgatgatgtattttgatatcatggcatatgtattttggagacatatgaattatatccgctgcgactgttg- 54027  T
Q  135 agattt--ttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaata 230  Q
    ||||||  ||||||||||||   ||||||  || ||   ||||||| ||| ||||||||||| ||||| |   |||| || |||| |||| |||||||||    
T  54026 agattttcttatatatgcat-gttgtttgaattttgatgtgaagacatagggtctatttcttgaatatatgctttattcgcgtgtattatcgctttaata 53928  T
Q  231 gaaataggg 239  Q
    |||||||||    
T  53927 gaaataggg 53919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 9677 - 9600
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |||||| | |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  9677 ttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgctttaattgaaatagggcgttaca 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 19102 - 19025
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| |||||| | |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  19102 ttgatgacgtatcatctatttcttgaatatttatattattcgtgtgttttattgctttaattgaaatagggcgttaca 19025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 11564 - 11325
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgta-ttttgatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||||||| |||||||| || |||| || |||| |||| || ||||| |||||||  |||| || |     
T  11564 tggatttattcatgttg--gagatttacccatttgtcgggacttggagaacttttatgttgttgtattttttatatcatgtcatgtattctttgaag-ta 11468  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctg--ttgaagacgtagcgtctatttcttaaatatttatat 204  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||     ||||| || ||  |||| || || ||||||||||||| ||||| |   |    
T  11467 tatggtttatatccgctgcgactgttg-agatttttatacatgcatgttgttttggattttgaattgatgatgtggcgtctatttcttgaatatatgctt 11369  T
Q  205 tatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    ||| || ||||||||| || ||||||||||||||||||||||||    
T  11368 tattcgcgtgttttatcgccttaatagaaatagggcgttacatt 11325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 7190 - 7424
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  |||||||  ||||||||| ||| || ||||| || |||| ||||||||||| ||| |||||||||||||| |||| || |     
T  7190 tggatttattcatgttg--gagatttacccatttgtcaggactttgagaactt-tatgttgatgtatttttgatatcatggcatgtatactttgaag-ta 7285  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatatt 205  Q
    |||| ||||||||||||| |||  |||| |||||||||| ||||||   | ||||| || ||| ||   |||||||||||||||||| ||||| | ||||    
T  7286 tatggtttatatccgctgtgacaattga-gatttttatacatgcatgt-tatttggattttgtatgctcacgtagcgtctatttcttgaatatatgtatt 7383  T
Q  206 atccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    || || ||||||||| | |||||||||||||||||||||||    
T  7384 attcgcgtgttttatcgatttaatagaaatagggcgttaca 7424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 19860 - 20001
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| || || |||||||||  ||||||||||||| |||||||| || |||||| |||||||||||| |||||||||||||  |||| || | |    
T  19860 tggatttattcatatt-tggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 19957  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcat 152  Q
    ||| |||||||||||| |||||||||  |||||| ||||||||||    
T  19958 atggtttatatccgctacgactgttg-cgattttaatatatgcat 20001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 29436 - 29577
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| || || |||||||||  ||||||||||||| |||||||| || |||||| |||||||||||| |||||||||||||  |||| || | |    
T  29436 tggatttattcatatt-tggagatttacccatttgtcgggacttggagaaattttatgattatgtattttgatatcatggcatgtatgctttgaag-tat 29533  T
Q  108 atgatttatatccgctgcgactgttgaagatttttatatatgcat 152  Q
    ||| |||||||||||| |||||||||  |||||| ||||||||||    
T  29534 atggtttatatccgctacgactgttg-cgattttaatatatgcat 29577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 9481 - 9448
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  9481 tgttttattgctttaatagaaatagggtgttaca 9448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 12677 - 12748
Alignment:
Q  175 acgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  12677 acgtagagtctatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgttaca 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 12545 - 12624
Alignment:
Q  44 cgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtatgatttatatccgct 123  Q
    |||||||| |||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||| | ||||| ||||    
T  12545 cgggattttgagaatttatatgatgatgtattttgatccgatgacatgtatactttggagatgtatgctatatatacgct 12624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 15890 - 16137
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggcc-atttgtcgggatttggagaatttatatgatgatgtattt-tgatctcatggcatgtatattt 98  Q
    |||||| |||||| ||||||||| | |||||||  || | |||||| |||| | ||| |||||||| |||||||||  |||  | ||| ||||| |||||    
T  15890 tttattttggattgatttatgtttttgagattttacccacttgtcgagattag-agattttatatgttgatgtattggtgagtttatgacatgtgtattt 15988  T
Q  99 tggagatgtatgatttatatccgctgcgactgttgaaga--tttttatatatgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaat 196  Q
    |||| ||||||| |||||||||||||||||| |||| ||  ||| |||||||||||     |||||  ||||||||||||| | ||||||| |||| |||    
T  15989 tggatatgtatgttttatatccgctgcgacttttgaggaactttatatatatgcatgttgttttggaatctgttgaagacg-aacgtctatgtcttgaat 16087  T
Q  197 atttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||  ||||| || ||||||||| |||||||||||| ||||| ||||||    
T  16088 atttgcattattcgcgtgttttatcgctttaatagaagtagggtgttaca 16137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 141342 - 141537
Alignment:
Q  49 tttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgtat-gatttatatccgctgcgactgttgaagatttttatata 147  Q
    |||||||||||| ||||||||||||||   |||||||  |||||||| ||| ||| ||||| | |||||||||||||| ||||||||  ||||||||| |    
T  141342 tttggagaattt-tatgatgatgtattca-atctcattacatgtatacttttgaggtgtattggtttatatccgctgcaactgttgagaatttttataca 141439  T
Q  148 tgcatacatgtttggtttctgttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||     ||||| || |||||| ||| | || |||||||||| |||||| ||||||| |  ||||||||| ||||||||||||||||||| |||||    
T  141440 tgcatgttgttttggattttgttgaggacctggcatctatttcttgaatatt-atattattcacgtgttttatcgctttaatagaaatagggccttaca 141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 166790 - 166859
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  166790 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 166859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 167328 - 167397
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  167328 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 167397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 5856 - 5732
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtatattttggagatgt 107  Q
    |||||||||| ||||  |||||||||| ||| ||||||||||||||||||||| |||  |||  |||||| || ||||||||| ||||  || |||||||    
T  5856 tggatttatt-atgtgttggagatttgcccacttgtcgggatttggagaatttttatactgagatatttttatatcatggcatctatacctttgagatgt 5758  T
Q  108 atgatttatatccgctgcgactgttg 133  Q
    ||||| | ||||||||||||||||||    
T  5757 atgatatttatccgctgcgactgttg 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 5708 - 5649
Alignment:
Q  185 tatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    |||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  5708 tatttcttgaatatttatattattcgcgtgttttatcgctttaatagaaatagggcgtta 5649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 8272 - 8197
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||||||| |||||||||||| ||||||| |||||| || ||||||||| |||||||||||| ||||||||||    
T  8272 ttgaagacgtaacgtctatttcttgaatatttgtattattcgcgtgttttatcgctttaatagaagtagggcgtta 8197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 4809 - 4647
Alignment:
Q  74 ttttgatctcatggcatgtatattttggagatgtatgatttata-tccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tg 171  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||| || |||||||||||||| |||||||||| ||||||     |||||  | ||| ||    
T  4809 ttttgatatcatggcatgtatattttgaat-tatatgatttataatctgctgcgactgttga-gatttttatacatgcatgttgttttggaatttgtgtg 4712  T
Q  172 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    | ||||||||||||||||||| ||||| | |||||| || |||||| || |||||||||||||||    
T  4711 atgacgtagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 4647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 3342 - 3180
Alignment:
Q  74 ttttgatctcatggcatgtatattttggagatgtatgatttat-atccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tg 171  Q
    ||||||| |||||||||||||||||| ||  | |||||||||| ||||||||||||||||| ||||||||||| ||||||     |||||  | ||| ||    
T  3342 ttttgatatcatggcatgtatatttt-gaattatatgatttataatccgctgcgactgttg-agatttttatacatgcatgttgttttggaatttgtgtg 3245  T
Q  172 aagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaata 236  Q
    | |||| |||||||||||||| ||||| | |||||| || |||||| || |||||||||||||||    
T  3244 atgacgaagcgtctatttcttgaatatatgtattattcgcgtgtttaatcgctttaatagaaata 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 16294 - 16164
Alignment:
Q  107 tatgatttata-tccgctgcgactgttgaagatttttatatatgcatacatgtttggtttctgt-tgaagacgtagcgtctatttcttaaatatttatat 204  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||| ||     |||||  | ||| ||| ||||||||||||||||||| ||||| | | |    
T  16294 tatgatttataatccgctgcgactgttga-gatttttatacatgtatgttgttttggaatttgtgtgatgacgtagcgtctatttcttgaatatatgttt 16196  T
Q  205 tatccgtgtgttttattgctttaatagaaata 236  Q
    ||| || |||||| || |||||||||||||||    
T  16195 tattcgcgtgtttaatcgctttaatagaaata 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 7390 - 7461
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| | ||||||| | ||||||||| |||||||||||||||||||||||||    
T  7390 gacgtagcgtctatttcttgaatatatttattatc-gcgtgttttatcgctttaatagaaatagggcgttaca 7461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 70511 - 70583
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||||  |||||| || ||||||||| ||||||||||| |||||||||||||    
T  70511 gacgtagcgtctatttcttgaatattattattattcgcgtgttttatcgctttaatagacatagggcgttaca 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 77692 - 77623
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| | |||||| || ||||||||   |||||||||||||| |||||||||    
T  77692 gtagcgtctatttcttgaatatatttattattcgcgtgttttaccactttaatagaaataaggcgttaca 77623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 9321 - 9251
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgtta 244  Q
    ||||||||||||||||||| ||||| | |||||| || ||||||||| |||||||||||||||||| ||||    
T  9321 gacgtagcgtctatttcttgaatatatttattattcgcgtgttttatcgctttaatagaaatagggtgtta 9251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 12861 - 12938
Alignment:
Q  169 ttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||| ||||||||||||||||||| ||||| | |||||| || ||| ||||| ||||||||||||||||| |||||||    
T  12861 ttgatgacgtagcgtctatttcttgaatatatgtattattcgcgtgatttatcgctttaatagaaataggacgttaca 12938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17149 - 17080
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||||||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||    
T  17149 gtagcgtctatttcttaaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 17080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 10311 - 10380
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  ||||||  |  ||||||||||||||||||||||||||| ||||||    
T  10311 gtagcgactatttcttgaatattattattatttgcatgttttattgctttaatagaaatagggtgttaca 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 18741 - 18673
Alignment:
Q  25 tggagatttggccatttgtcgggatttggagaatttatatgatgatgtattttgatctcatggcatgtat 94  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||    
T  18741 tggagatttacccatttgtcgggatttggagaatttttatgatgatgta-tttgatatcatagcatgtat 18673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 24640 - 24712
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||| ||||| | |||||| || |||||  || |||||||||||||||| ||||||||    
T  24640 gacgtagcgtctatttcttgaatatatgtattattcgcgtgttaaatcgctttaatagaaatagagcgttaca 24712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 43865 - 43796
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||||||||||    
T  43865 gtagcgactatttcttgaatattattattattcgcttgttttattgctttaatagaaatagggcgttaca 43796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 52035 - 51966
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||||||||||    
T  52035 gtagcgactatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggcgttaca 51966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 3033 - 3101
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||| ||||| | |||||| |  ||||||||| |||||||||||||||||||||||||    
T  3033 tagcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 3101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 11288 - 11356
Alignment:
Q  178 tagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||| ||||| | |||||| |  ||||||||| |||||||||||||||||||||||||    
T  11288 tagcgtctatttcttgaatatatgtattattcacgtgttttatcgctttaatagaaatagggcgttaca 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 4847 - 4784
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||| |||||||||||||| || |||| |||| ||||||||||||||||||| |||||    
T  4847 tctatttcttgaatatttatattattcgcgtgtattatcgctttaatagaaatagggcattaca 4784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 64677 - 64744
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||||||||| ||||||| |||||| || |||||||||||||||||||||| | |||| |||||||    
T  64677 cgtctatttcttgaatatttgtattattcgggtgttttattgctttaatagaagttgggctttacatt 64744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 25343 - 25281
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttac 245  Q
    |||||||||| ||||||| || ||| |||||||||||| |||||||||||||||| |||||||    
T  25343 tctatttcttgaatatttgtaatattcgtgtgttttatcgctttaatagaaatagagcgttac 25281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 16723 - 16789
Alignment:
Q  2 ttattctggatttatttatgttgtggaga-tttggccatttgtcgggatttggagaatttatatgat 67  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||| |||||| ||||||||||    
T  16723 ttattctggatttatttatgttgtgaagattttacccatttgtcgggatgtggagattttatatgat 16789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 33439 - 33367
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| ||||||||||| ||||| | | || | || | ||||||| |||||||||||||||||||||||||    
T  33439 gacgtagtgtctatttcttgaatatatgttttgttcgcgagttttatcgctttaatagaaatagggcgttaca 33367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 1160 - 1091
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||| |||||||| ||||| | |||||| || ||||||||| |||||||| ||||||||||||||||    
T  1160 gtagcgtttatttcttgaatatatgtattattcgcgtgttttatcgctttaatggaaatagggcgttaca 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 25415 - 25653
Alignment:
Q  8 tggatttatttatgttgtggagatttggccatttgtcgggatttggagaatttatatgatgatgtatttt-gatctcatggcatgtatattttggagatg 106  Q
    |||||||||| ||||||  ||| |||  ||||||||||||| ||||||||  | |||| ||||||||||| ||| ||||| |||||||  || | || |     
T  25415 tggatttattcatgttg--gaggtttacccatttgtcgggacttggagaacatttatgttgatgtatttttgatatcatgccatgtatgcttcgaag-ta 25511  T
Q  107 tatgatttatatccgctgcgactgttgaagatttttatatatgcatacatg--tttggtttctgt-tgaagacgtagcgtctatttcttaaatatttata 203  Q
    | || ||||||||||||||||||||||| |||||||||  ||||||   ||  ||||  || ||| ||| || |||||||||||||||| ||||| | ||    
T  25512 tttggtttatatccgctgcgactgttga-gatttttatgcatgcatgt-tgaatttgaattttgtatgatgatgtagcgtctatttcttgaatatatgta 25609  T
Q  204 ttatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||| ||  |||||||  ||||||||||||||| ||||||||||    
T  25610 ttattcgcatgttttaccgctttaatagaaataaggcgttacat 25653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 3764 - 3695
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  3764 gtagcgactatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggtgttaca 3695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 11724 - 11655
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  11724 gtagcgactatttcttgaatattattattattcgcatgttttattgctttaatagaaatagggtgttaca 11655  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 36031 - 36100
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| || ||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  36031 gtagcgtctatttcttgaatatataaattattcgcatgtttaattgctttaatagaagtagggcgttaca 36100  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 249741 - 249803
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| |||||||||| ||||  | |||||| ||| ||||| ||||||||||||||||||||    
T  249741 cgtagcctctatttcttgaataaatgtattattcgtatgtttaattgctttaatagaaatagg 249803  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 107552 - 107480
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  107552 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttaca 107480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 130014 - 129961
Alignment:
Q  1 tttattctggatttatttatgttgtggagatttggccatttgtcgggatttgga 54  Q
    |||||| |||| ||||||||||| |||||||||  |||||||||||||||||||    
T  130014 tttattttggacttatttatgttttggagatttacccatttgtcgggatttgga 129961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 107111 - 107183
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||| | ||||||    
T  107111 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagagtgttaca 107183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 75132 - 75061
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||||    
T  75132 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttacatt 75061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 5747 - 5674
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||| |||||||||| ||||  | |||||| ||  |||||||||||||||||||||||| || |||||||    
T  5747 gacgtagcatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaataaggtgttacat 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 1077 - 1012
Alignment:
Q  181 cgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||| ||||||| || ||| |  ||||||||| |||||||||||| ||||||||||||    
T  1077 cgtctatttcttgaatatttgtaatattcacgtgttttatcgctttaatagaagtagggcgttaca 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 15889 - 15820
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| ||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||    
T  15889 gtagcgtccatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 15820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 29262 - 29193
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||||||||||    
T  29262 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggcgttaca 29193  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 35955 - 36024
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  35955 gtagcgtctatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 36024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 6628 - 6556
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| | |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| ||||||    
T  6628 gacgtaacatctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttaca 6556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 16793 - 16865
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||   |||||||  |  ||||||||||||||||||||||||||| ||||||    
T  16793 gacgtagcatctatttcttgaataaacatattatttgcatgttttattgctttaatagaaatagggtgttaca 16865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 7882 - 7946
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacat 247  Q
    |||||||||| ||||  | |||||| ||  ||||||||||||||||||||||||||| |||||||    
T  7882 tctatttcttgaataaatgtattattcgcatgttttattgctttaatagaaatagggtgttacat 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 91896 - 91832
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| |||| || |||||| ||  ||||| ||||||||||||||||||||    
T  91896 gacgtagcatctatttcttgaataattgtattattcgcatgtttaattgctttaatagaaatagg 91832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 53705 - 53774
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  53705 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 53774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 438 - 501
Alignment:
Q  183 tctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||||| ||||||| |||||| |   |||||||| |||||||||||| ||||||||||||    
T  438 tctatttcttgaatatttctattattcacatgttttatcgctttaatagaattagggcgttaca 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 11601 - 11672
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg-gcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||| ||||| |||||||||||||||||||| ||||||||    
T  11601 cgtagcctctatttcttgaataaatgtattattcgtatgtttaattgctttaatagaaataggagcgttaca 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 37404 - 37341
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatag 237  Q
    |||||||| |||||||||||||||  | |||||| ||  ||||| |||||||||||||||||||    
T  37404 gacgtagcctctatttcttaaataaatgtattattcgcatgtttaattgctttaatagaaatag 37341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 953 - 891
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| |||||||||||||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  953 cgtagcctctatttcttaaataaatgtattattcgcatgtttaattgctttaatagaaatagg 891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 6542 - 6464
Alignment:
Q  168 gttgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||| |||||| |||||| ||||| ||||| | |||||| || | |||| || |||||||||||| ||||||||||||    
T  6542 gttgatgacgtaacgtctaattcttgaatatatttattattcgcgagtttcatcgctttaatagaattagggcgttaca 6464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 12275 - 12345
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| |||| || |||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  12275 cgtagcctctatttcttgaataattgtattattcgcatgtttaattgctttaatagaagtagggtgttaca 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 20394 - 20324
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  20394 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 20324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 83802 - 83872
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||| ||||||||||||    
T  83802 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaagtagggcgttaca 83872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 717 - 648
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  717 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttaca 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 6905 - 6872
Alignment:
Q  213 tgttttattgctttaatagaaatagggcgttaca 246  Q
    ||||||||||||||||||||||||||| ||||||    
T  6905 tgttttattgctttaatagaaatagggtgttaca 6872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 168484 - 168553
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| ||||||| | ||||||  |||||| ||  ||||||||||||||||||||| ||||| ||||||    
T  168484 gtagcgactatttcatgaatattattattattcgcatgttttattgctttaatagaagtagggtgttaca 168553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 2866 - 2938
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||| | |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||| ||||||    
T  2866 gacgtaacatctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagggtgttaca 2938  T

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Target: scaffold0396 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 14507 - 14571
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  14507 gacgtagcatctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 14571  T

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Target: scaffold0395 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 13626 - 13562
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||    
T  13626 gacgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagg 13562  T

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Target: scaffold0222 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 28218 - 28146
Alignment:
Q  176 cgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttacatt 248  Q
    |||||| |||||||||| ||||  | |||||| ||  ||||| ||||||||||||||||||||| ||| ||||    
T  28218 cgtagcctctatttcttgaataaatgtattattcgcatgtttaattgctttaatagaaatagggtgtttcatt 28146  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 26546 - 26478
Alignment:
Q  170 tgaagacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||||||||  |||||||||| ||||  | ||||||  | |||||| ||||||||||||||||||||    
T  26546 tgaagacgtagtctctatttcttgaataaatgtattatttgcgtgtttaattgctttaatagaaatagg 26478  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 72432 - 72504
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttaca 246  Q
    |||||||| |||||||||| ||||  | || ||| ||  ||||||||||||||||||||||||| | ||||||    
T  72432 gacgtagcatctatttcttgaataaatgtactattcgcatgttttattgctttaatagaaatagagggttaca 72504  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 93902 - 93838
Alignment:
Q  174 gacgtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagg 238  Q
    |||||| | |||||||||| |||| || |||||| ||  ||| ||||||||||||||||||||||    
T  93902 gacgtatcatctatttcttgaataattgtattattcgcatgtattattgctttaatagaaatagg 93838  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 67920 - 67988
Alignment:
Q  177 gtagcgtctatttcttaaatatttatattatccgtgtgttttattgctttaatagaaatagggcgttac 245  Q
    |||||| ||||||||| ||||| |  ||||| ||  ||||| ||||||||||||||||||||| |||||    
T  67920 gtagcgactatttcttgaatatatgaattattcgcatgtttaattgctttaatagaaatagggtgttac 67988  T

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