View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9461_low_63 (Length: 316)
Name: NF9461_low_63
Description: NF9461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9461_low_63 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 22 - 316
Target Start/End: Complemental strand, 36907229 - 36906934
Alignment:
| Q |
22 |
agtgttactcaaatccagggttgctatgagaacggcaaagtctgcatttcattattcaatgaaaacacaatttatcggtcgatcatatacattttgagct |
121 |
Q |
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| T |
36907229 |
agtgttgctcaaatccagggttgctatgagaacggcaaagtctgtatttcattattcaatgaaaacacaatttatcggtcgatcatatacattttgagct |
36907130 |
T |
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| Q |
122 |
atccaactgaaaaacatcaaattcgcacacttggttcgtacaaatttcttgttttattcattttcttttcgcctacagtgatcaataatttattgatcca |
221 |
Q |
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| T |
36907129 |
atccaactgaaaaacatcaaatttgcacacttggttcgtacaaatttcttgttttattcattttcttttcgcctacagtgatcaatattttattgatcta |
36907030 |
T |
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| Q |
222 |
agactgaaaccagtaacacag-tcttagaatggttatcttgggagcactaatatcaggttacacaaaaggagatacaacttctattcagtctcata |
316 |
Q |
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| T |
36907029 |
agactgaaaccagtaacacagctcttacaatggttatcttgggagcacaaatatcaggttacacaaaaggagatacaacttctattcagtctcata |
36906934 |
T |
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