View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9463_low_11 (Length: 338)
Name: NF9463_low_11
Description: NF9463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9463_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 41956059 - 41956264
Alignment:
| Q |
128 |
aaatacatagttgtcctataaattgtcaaacaaatgattgctcacaacttcacataacacaactcaattttaaaactatgcatttgatggctcattctct |
227 |
Q |
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| T |
41956059 |
aaatacatagttatcccataaattgtcaaacaaatggttgttcacaacttcacataacacaactcaattttaaaactatgcatttgatggctcattctct |
41956158 |
T |
|
| Q |
228 |
aatacaaacacttgtaatgtcattttatttttatattccaagtctttgttttatcagcttttatttaaaaaatgaaaattgaagcacttccttcatctct |
327 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41956159 |
aatacaaacacttgtaatgtcattttatttttatattccaagtctttgttttatcagcttttatttaaaaaatgaaaattgaagcacttccttcatctct |
41956258 |
T |
|
| Q |
328 |
gcttct |
333 |
Q |
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| |||| |
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| T |
41956259 |
gattct |
41956264 |
T |
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