View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9463_low_35 (Length: 210)
Name: NF9463_low_35
Description: NF9463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9463_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 51382779 - 51382603
Alignment:
| Q |
15 |
aaaggcatgaaaatatttcaaggctgaatctgaaatccaatagtagaaataaatttgaaaagctaatgatacctggtaaagattagtgttagagtaggag |
114 |
Q |
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| T |
51382779 |
aaaggcatgaaaatatttcaaggctgaatctgaaatccaatagtagaaataaatttgaaaagctaatgatacctggtaaagattagtgttagagtaggaa |
51382680 |
T |
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| Q |
115 |
cagaaaatgcacacaaaacatagagttattcatgtttcatcttatatataaatatgtagccatgagacggttccttc |
191 |
Q |
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| T |
51382679 |
cagaaaatgcacacaaaacatagagttattcatgtttcatcttatatataaatatgtagccatgagacggttccttc |
51382603 |
T |
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