View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9464_low_8 (Length: 230)
Name: NF9464_low_8
Description: NF9464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9464_low_8 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 43148136 - 43148365
Alignment:
| Q |
1 |
acaaccagaatttagtcatgcttaatgagtgagtatgaaggaagtgaggttcctgtcgtgattcaatttattctcaatcacaacggcttgaaaaatgtta |
100 |
Q |
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| T |
43148136 |
acaaccagaatttagtcatgcttaatgagtgagtatgaaggaagtgaggttcctgtcgtgattcaatttattctcaatcacaacggcttgaaaaatgtta |
43148235 |
T |
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| Q |
101 |
ggaacggaattggaagtagaaatgataaggcggtagatggcgtcttcagcaagggcaagacgagattcacctttgatgactttctcgaacttcaactttg |
200 |
Q |
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| T |
43148236 |
ggaacggaattggaagtagaaatgataaggcggtagatggcgtcttcagcaagggcaagacgagattcacctttgatgactttctcgaactttaactttg |
43148335 |
T |
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| Q |
201 |
ccccaatttatttgttgaactcgataacag |
230 |
Q |
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||||| ||| |||||||||||||||||||| |
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| T |
43148336 |
ccccagtttgtttgttgaactcgataacag |
43148365 |
T |
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