View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9466_low_35 (Length: 211)

Name: NF9466_low_35
Description: NF9466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9466_low_35
NF9466_low_35
[»] chr1 (20 HSPs)
chr1 (17-205)||(41394422-41394610)
chr1 (17-154)||(37844374-37844513)
chr1 (17-154)||(20913230-20913367)
chr1 (17-154)||(20931545-20931682)
chr1 (17-154)||(20445879-20446019)
chr1 (17-154)||(20893551-20893689)
chr1 (17-154)||(20531644-20531783)
chr1 (122-202)||(21860334-21860414)
chr1 (122-196)||(44034829-44034903)
chr1 (88-195)||(27675086-27675191)
chr1 (122-202)||(41218728-41218808)
chr1 (18-80)||(51452693-51452755)
chr1 (138-195)||(13376711-13376768)
chr1 (138-195)||(20177513-20177570)
chr1 (122-155)||(45051726-45051759)
chr1 (122-153)||(15861327-15861358)
chr1 (16-68)||(5072388-5072440)
chr1 (23-63)||(16646118-16646158)
chr1 (16-68)||(18601118-18601170)
chr1 (122-154)||(51452809-51452841)
[»] chr3 (52 HSPs)
chr3 (18-205)||(16743990-16744177)
chr3 (17-202)||(19231981-19232169)
chr3 (17-154)||(13839094-13839232)
chr3 (19-154)||(14842487-14842622)
chr3 (17-154)||(2050010-2050147)
chr3 (17-154)||(12030073-12030210)
chr3 (34-154)||(19260749-19260869)
chr3 (119-197)||(15857120-15857198)
chr3 (122-202)||(3992873-3992953)
chr3 (122-202)||(55513193-55513273)
chr3 (122-202)||(2844514-2844594)
chr3 (122-202)||(54037976-54038056)
chr3 (17-117)||(15858986-15859087)
chr3 (122-202)||(17955832-17955916)
chr3 (17-90)||(51158008-51158081)
chr3 (122-202)||(7854305-7854385)
chr3 (18-80)||(2449238-2449300)
chr3 (122-183)||(45581954-45582016)
chr3 (17-80)||(17912483-17912545)
chr3 (138-195)||(17205019-17205076)
chr3 (122-195)||(38810868-38810941)
chr3 (20-80)||(13954890-13954949)
chr3 (20-80)||(13975722-13975781)
chr3 (17-73)||(15936634-15936690)
chr3 (20-80)||(45861009-45861068)
chr3 (140-195)||(12031849-12031904)
chr3 (122-195)||(13301323-13301396)
chr3 (122-195)||(13311979-13312052)
chr3 (23-64)||(14080715-14080756)
chr3 (122-155)||(15615137-15615170)
chr3 (138-195)||(17191879-17191936)
chr3 (122-154)||(2449152-2449184)
chr3 (122-154)||(16261777-16261809)
chr3 (122-154)||(16933869-16933901)
chr3 (122-154)||(17912398-17912430)
chr3 (122-154)||(23492696-23492728)
chr3 (122-154)||(38168237-38168269)
chr3 (16-68)||(41270275-41270327)
chr3 (122-154)||(53771365-53771397)
chr3 (16-68)||(55316419-55316471)
chr3 (138-195)||(3576290-3576347)
chr3 (123-188)||(15550922-15550987)
chr3 (122-154)||(11986080-11986112)
chr3 (122-154)||(13954804-13954836)
chr3 (23-63)||(14059214-14059254)
chr3 (122-154)||(14285289-14285321)
chr3 (122-154)||(19947026-19947058)
chr3 (122-154)||(30153265-30153297)
chr3 (23-63)||(30207422-30207462)
chr3 (122-154)||(33342204-33342236)
chr3 (122-154)||(45861122-45861154)
chr3 (122-154)||(51961031-51961063)
[»] chr2 (36 HSPs)
chr2 (17-202)||(20627190-20627376)
chr2 (17-202)||(43642833-43643020)
chr2 (17-154)||(462938-463075)
chr2 (18-202)||(19794581-19794766)
chr2 (17-154)||(8891442-8891581)
chr2 (17-154)||(36982364-36982504)
chr2 (58-154)||(22863169-22863267)
chr2 (122-202)||(22275045-22275125)
chr2 (122-202)||(22284278-22284358)
chr2 (17-154)||(24341309-24341452)
chr2 (123-202)||(15633538-15633617)
chr2 (17-80)||(25265390-25265453)
chr2 (18-80)||(14906440-14906502)
chr2 (18-80)||(19689401-19689463)
chr2 (18-80)||(23820272-23820334)
chr2 (18-80)||(20015212-20015274)
chr2 (138-195)||(43646232-43646289)
chr2 (20-80)||(17396653-17396712)
chr2 (122-155)||(19689314-19689347)
chr2 (122-154)||(9652796-9652828)
chr2 (122-154)||(14906354-14906386)
chr2 (143-195)||(19660221-19660273)
chr2 (16-68)||(19886661-19886713)
chr2 (122-154)||(23820388-23820420)
chr2 (122-153)||(25213372-25213403)
chr2 (122-195)||(19666848-19666921)
chr2 (138-195)||(25305769-25305826)
chr2 (88-195)||(31146032-31146138)
chr2 (23-63)||(68198-68238)
chr2 (122-154)||(7507757-7507789)
chr2 (122-154)||(17396567-17396599)
chr2 (122-154)||(20015328-20015360)
chr2 (23-63)||(22775206-22775246)
chr2 (23-63)||(22780584-22780624)
chr2 (122-154)||(28031134-28031166)
chr2 (122-154)||(33128372-33128404)
[»] chr7 (43 HSPs)
chr7 (17-195)||(3060166-3060344)
chr7 (17-154)||(16211966-16212103)
chr7 (17-154)||(13036938-13037077)
chr7 (17-154)||(11580661-11580802)
chr7 (17-154)||(36052864-36053003)
chr7 (122-202)||(32493898-32493978)
chr7 (122-202)||(126738-126818)
chr7 (122-202)||(1936869-1936949)
chr7 (122-202)||(111121-111201)
chr7 (17-80)||(47481031-47481094)
chr7 (18-80)||(11516428-11516490)
chr7 (17-79)||(13321216-13321278)
chr7 (18-80)||(15441564-15441626)
chr7 (18-80)||(30262129-30262191)
chr7 (88-195)||(13377819-13377924)
chr7 (123-202)||(7283908-7283987)
chr7 (21-80)||(7293220-7293279)
chr7 (138-195)||(13389693-13389750)
chr7 (48-154)||(36024372-36024485)
chr7 (17-73)||(18253842-18253898)
chr7 (20-80)||(25292338-25292398)
chr7 (17-152)||(295893-296029)
chr7 (122-154)||(2029244-2029276)
chr7 (122-154)||(7293333-7293365)
chr7 (16-68)||(10989609-10989661)
chr7 (122-154)||(11516544-11516576)
chr7 (122-154)||(14113903-14113935)
chr7 (122-154)||(15441478-15441510)
chr7 (85-154)||(15709428-15709501)
chr7 (139-195)||(16919870-16919926)
chr7 (122-154)||(30262043-30262075)
chr7 (122-154)||(42056188-42056220)
chr7 (16-69)||(2437657-2437710)
chr7 (122-154)||(371417-371449)
chr7 (122-154)||(3049905-3049937)
chr7 (122-154)||(13321334-13321366)
chr7 (23-63)||(13377735-13377775)
chr7 (16-68)||(13911024-13911076)
chr7 (48-80)||(14113989-14114021)
chr7 (48-80)||(14423639-14423671)
chr7 (122-150)||(15516765-15516793)
chr7 (122-154)||(25124450-25124482)
chr7 (122-154)||(47480944-47480976)
[»] chr8 (27 HSPs)
chr8 (17-202)||(16404852-16405038)
chr8 (17-154)||(16193643-16193779)
chr8 (17-154)||(24928716-24928854)
chr8 (17-154)||(43373392-43373531)
chr8 (122-202)||(274766-274846)
chr8 (122-202)||(641003-641083)
chr8 (122-202)||(826809-826889)
chr8 (122-202)||(24716714-24716794)
chr8 (18-80)||(5238288-5238350)
chr8 (18-80)||(22907214-22907276)
chr8 (18-80)||(24661248-24661310)
chr8 (18-80)||(43685747-43685809)
chr8 (122-202)||(39115598-39115678)
chr8 (17-80)||(17345769-17345832)
chr8 (138-195)||(17285543-17285600)
chr8 (138-195)||(21198005-21198062)
chr8 (122-154)||(5238404-5238436)
chr8 (122-154)||(22907128-22907160)
chr8 (122-154)||(24385652-24385684)
chr8 (122-154)||(24661162-24661194)
chr8 (122-154)||(43685863-43685895)
chr8 (17-68)||(6774258-6774309)
chr8 (17-68)||(24549182-24549233)
chr8 (122-154)||(2545265-2545297)
chr8 (122-154)||(3431176-3431208)
chr8 (122-154)||(22886654-22886686)
chr8 (16-68)||(30120922-30120974)
[»] chr4 (26 HSPs)
chr4 (17-202)||(54118120-54118307)
chr4 (17-154)||(122089-122226)
chr4 (21-154)||(13246634-13246769)
chr4 (17-154)||(15675009-15675152)
chr4 (17-154)||(33240900-33241043)
chr4 (17-154)||(10104170-10104313)
chr4 (122-202)||(25119059-25119139)
chr4 (122-202)||(5682380-5682460)
chr4 (48-154)||(31132545-31132657)
chr4 (18-80)||(10488763-10488825)
chr4 (18-80)||(16327926-16327988)
chr4 (18-80)||(26680401-26680463)
chr4 (122-195)||(41165808-41165881)
chr4 (138-195)||(47534933-47534990)
chr4 (122-154)||(14952085-14952117)
chr4 (122-154)||(15135907-15135939)
chr4 (122-154)||(15272211-15272243)
chr4 (122-154)||(16327840-16327872)
chr4 (122-154)||(16609013-16609045)
chr4 (122-154)||(26680517-26680549)
chr4 (17-80)||(13048221-13048284)
chr4 (122-154)||(8045272-8045304)
chr4 (23-63)||(15045034-15045074)
chr4 (122-154)||(16523146-16523178)
chr4 (20-64)||(40885570-40885614)
chr4 (16-68)||(47357854-47357906)
[»] scaffold0023 (2 HSPs)
scaffold0023 (17-154)||(48798-48935)
scaffold0023 (122-154)||(61122-61154)
[»] scaffold0106 (1 HSPs)
scaffold0106 (17-154)||(41929-42066)
[»] scaffold0266 (2 HSPs)
scaffold0266 (17-154)||(3508-3645)
scaffold0266 (18-154)||(1325-1462)
[»] scaffold0001 (2 HSPs)
scaffold0001 (17-154)||(172105-172242)
scaffold0001 (17-154)||(177808-177945)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-152)||(51110-51245)
[»] scaffold0008 (1 HSPs)
scaffold0008 (17-154)||(128095-128232)
[»] scaffold0012 (2 HSPs)
scaffold0012 (17-154)||(247366-247505)
scaffold0012 (122-154)||(34075-34107)
[»] scaffold0413 (1 HSPs)
scaffold0413 (17-154)||(5990-6127)
[»] scaffold0175 (1 HSPs)
scaffold0175 (17-154)||(882-1019)
[»] chr6 (29 HSPs)
chr6 (17-154)||(23153647-23153786)
chr6 (17-153)||(14626045-14626181)
chr6 (85-154)||(23148266-23148335)
chr6 (122-202)||(19983144-19983224)
chr6 (122-202)||(35015009-35015089)
chr6 (122-202)||(18583640-18583720)
chr6 (17-80)||(1657748-1657811)
chr6 (17-80)||(15862671-15862734)
chr6 (17-80)||(35009439-35009502)
chr6 (138-195)||(21623506-21623563)
chr6 (16-68)||(25175763-25175815)
chr6 (17-80)||(27751625-27751688)
chr6 (122-155)||(1650020-1650053)
chr6 (138-195)||(22361619-22361676)
chr6 (123-195)||(14152632-14152704)
chr6 (16-68)||(16825752-16825804)
chr6 (122-154)||(18002395-18002427)
chr6 (122-154)||(23995247-23995279)
chr6 (122-154)||(26090059-26090091)
chr6 (122-153)||(4991396-4991427)
chr6 (124-154)||(15742120-15742150)
chr6 (122-154)||(1657661-1657693)
chr6 (122-154)||(15862789-15862821)
chr6 (23-63)||(18399144-18399184)
chr6 (122-154)||(18823283-18823315)
chr6 (122-154)||(18839138-18839170)
chr6 (16-68)||(27653983-27654035)
chr6 (122-154)||(27751742-27751774)
chr6 (122-154)||(32276659-32276691)
[»] scaffold0162 (3 HSPs)
scaffold0162 (17-154)||(26340-26478)
scaffold0162 (20-80)||(8180-8240)
scaffold0162 (138-195)||(6877-6934)
[»] scaffold0077 (2 HSPs)
scaffold0077 (17-155)||(36836-36976)
scaffold0077 (123-202)||(15319-15398)
[»] chr5 (31 HSPs)
chr5 (17-154)||(23507165-23507302)
chr5 (17-154)||(27182471-27182610)
chr5 (17-154)||(18530988-18531130)
chr5 (17-154)||(22053753-22053896)
chr5 (18-80)||(20623170-20623232)
chr5 (18-80)||(21233528-21233590)
chr5 (18-80)||(37052945-37053007)
chr5 (17-78)||(25900408-25900469)
chr5 (21-80)||(16536401-16536460)
chr5 (17-80)||(34939477-34939540)
chr5 (123-197)||(11584374-11584448)
chr5 (122-195)||(5450695-5450768)
chr5 (138-195)||(21222462-21222519)
chr5 (16-68)||(12574-12626)
chr5 (122-154)||(16105967-16105999)
chr5 (16-68)||(19500099-19500151)
chr5 (122-154)||(20623286-20623318)
chr5 (122-154)||(21233442-21233474)
chr5 (16-68)||(22366481-22366533)
chr5 (16-68)||(25426828-25426880)
chr5 (122-154)||(25900320-25900352)
chr5 (122-154)||(37053061-37053093)
chr5 (17-68)||(29188284-29188335)
chr5 (16-65)||(18777995-18778044)
chr5 (16-65)||(43443398-43443447)
chr5 (122-154)||(108728-108760)
chr5 (16-68)||(4199985-4200037)
chr5 (122-154)||(9730278-9730310)
chr5 (122-154)||(16536514-16536546)
chr5 (23-63)||(16595713-16595753)
chr5 (16-68)||(21073595-21073647)
[»] scaffold0498 (1 HSPs)
scaffold0498 (17-154)||(9078-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-154)||(272225-272362)
[»] scaffold0028 (3 HSPs)
scaffold0028 (17-154)||(89378-89517)
scaffold0028 (29-154)||(107708-107835)
scaffold0028 (122-153)||(130880-130911)
[»] scaffold0302 (1 HSPs)
scaffold0302 (17-154)||(12313-12450)
[»] scaffold0195 (2 HSPs)
scaffold0195 (17-151)||(19406-19543)
scaffold0195 (17-80)||(21490-21553)
[»] scaffold0025 (3 HSPs)
scaffold0025 (54-154)||(146838-146938)
scaffold0025 (17-154)||(9049-9192)
scaffold0025 (17-106)||(148921-149012)
[»] scaffold0218 (1 HSPs)
scaffold0218 (17-144)||(4996-5124)
[»] scaffold0011 (1 HSPs)
scaffold0011 (17-154)||(123087-123227)
[»] scaffold0034 (1 HSPs)
scaffold0034 (122-202)||(80187-80267)
[»] scaffold0016 (3 HSPs)
scaffold0016 (121-202)||(166116-166197)
scaffold0016 (121-196)||(162036-162111)
scaffold0016 (122-195)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (122-202)||(31132-31212)
[»] scaffold0078 (3 HSPs)
scaffold0078 (122-202)||(41632-41712)
scaffold0078 (18-80)||(37066-37128)
scaffold0078 (122-154)||(36980-37012)
[»] scaffold0686 (2 HSPs)
scaffold0686 (122-196)||(5735-5809)
scaffold0686 (122-196)||(5941-6015)
[»] scaffold0342 (1 HSPs)
scaffold0342 (121-202)||(304-385)
[»] scaffold0132 (3 HSPs)
scaffold0132 (122-202)||(42677-42754)
scaffold0132 (17-80)||(13706-13769)
scaffold0132 (122-154)||(13824-13856)
[»] scaffold0772 (2 HSPs)
scaffold0772 (17-73)||(5729-5785)
scaffold0772 (122-154)||(5846-5878)
[»] scaffold1542 (1 HSPs)
scaffold1542 (17-80)||(534-597)
[»] scaffold1164 (1 HSPs)
scaffold1164 (123-202)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (123-202)||(19802-19881)
scaffold0122 (123-202)||(24106-24185)
[»] scaffold0141 (4 HSPs)
scaffold0141 (18-80)||(26996-27058)
scaffold0141 (18-73)||(22741-22796)
scaffold0141 (122-154)||(22857-22889)
scaffold0141 (122-154)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (18-80)||(1582-1644)
scaffold0124 (122-154)||(1496-1528)
[»] scaffold0125 (2 HSPs)
scaffold0125 (17-80)||(41848-41911)
scaffold0125 (114-154)||(41957-41997)
[»] scaffold0075 (1 HSPs)
scaffold0075 (17-80)||(34460-34523)
[»] scaffold0049 (2 HSPs)
scaffold0049 (123-202)||(20493-20572)
scaffold0049 (17-73)||(48387-48443)
[»] scaffold0876 (1 HSPs)
scaffold0876 (123-193)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (123-197)||(6261-6335)
scaffold0310 (123-160)||(4-41)
[»] scaffold0507 (1 HSPs)
scaffold0507 (122-195)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (138-195)||(35816-35873)
[»] scaffold0116 (1 HSPs)
scaffold0116 (122-202)||(30417-30497)
[»] scaffold0026 (2 HSPs)
scaffold0026 (17-73)||(107947-108003)
scaffold0026 (23-65)||(89863-89905)
[»] scaffold1295 (1 HSPs)
scaffold1295 (138-195)||(442-499)
[»] scaffold0053 (1 HSPs)
scaffold0053 (138-195)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (122-155)||(193396-193429)
[»] scaffold1711 (1 HSPs)
scaffold1711 (16-68)||(1304-1356)
[»] scaffold0706 (1 HSPs)
scaffold0706 (122-154)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (122-154)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (122-154)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (122-154)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (122-154)||(57392-57424)
scaffold0058 (23-64)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (122-154)||(55904-55936)
scaffold0032 (122-154)||(108075-108107)
[»] scaffold0361 (1 HSPs)
scaffold0361 (21-80)||(3394-3453)
[»] scaffold0207 (1 HSPs)
scaffold0207 (111-154)||(18015-18058)
[»] scaffold1272 (1 HSPs)
scaffold1272 (138-195)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (138-195)||(6999-7056)
[»] scaffold0456 (2 HSPs)
scaffold0456 (23-64)||(1546-1587)
scaffold0456 (23-64)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (23-64)||(8216-8257)
[»] scaffold0080 (1 HSPs)
scaffold0080 (138-195)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (138-195)||(31357-31414)
[»] scaffold0589 (1 HSPs)
scaffold0589 (23-63)||(8011-8051)
[»] scaffold0529 (1 HSPs)
scaffold0529 (17-69)||(3163-3215)
[»] scaffold0367 (1 HSPs)
scaffold0367 (122-154)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (122-154)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (122-154)||(4346-4378)
[»] scaffold0243 (1 HSPs)
scaffold0243 (23-63)||(2317-2357)
[»] scaffold0234 (1 HSPs)
scaffold0234 (122-154)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (122-154)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (122-154)||(34308-34340)
[»] scaffold0092 (1 HSPs)
scaffold0092 (23-63)||(3525-3565)
[»] scaffold0066 (1 HSPs)
scaffold0066 (122-154)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (122-154)||(12418-12450)


Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 41394422 - 41394610
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394422 catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 41394521  T
Q  117 tgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41394522 tgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 37844513 - 37844374
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  37844513 catcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 37844414  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37844413 aatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 20913230 - 20913367
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaa 20913329  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| |||||||| |||||||||||||||||||||||||    
T  20913330 tgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 20931545 - 20931682
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaa 20931644  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  20931645 tgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 20445879 - 20446019
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-aca 113  Q
    |||||||||||||||||||||||| || || | |||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 20445978  T
Q  114 aaatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20445979 aaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 20893689 - 20893551
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| ||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaa 20893591  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20893590 aatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 20531644 - 20531783
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    ||||||||||||||||||||||||  | || | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  20531644 catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 20531743  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||   ||||||||||    
T  20531744 aatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 196  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 27675086 - 27675191
Alignment:
Q  88 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 187  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  188 agctccta 195  Q
    ||||||||    
T  27675184 agctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 41218728 - 41218808
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 51452693 - 51452755
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || ||||| |||||||||||||||||||| ||||||    
T  51452693 atcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  122 atgattatgataaagactaacccccttacctt 153  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 5072440 - 5072388
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||||||||||||||| |||||||||| || ||   ||||||||||||||||    
T  5072440 acatcaattcatgcatataaacataacatcacagcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16646118 - 16646158
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  16646118 ttcatgcattcaaacataacatcataattggagcacgaatt 16646158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 18601170 - 18601118
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||| ||||||||||    
T  18601170 acatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 16744177 - 16743990
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 117  Q
    ||||||||||| ||||||||||| || || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744177 atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaat 16744078  T
Q  118 gatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 205  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  16744077 gatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 19231981 - 19232169
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-aca 113  Q
    |||||||||||| ||| ||||||| || || |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  19231981 catcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 19232080  T
Q  114 aaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19232081 aaatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 13839094 - 13839232
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 115  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  13839094 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaa 13839193  T
Q  116 atgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13839194 atgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 14842622 - 14842487
Alignment:
Q  19 tcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 118  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||    
T  14842622 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtg 14842523  T
Q  119 atgatgattatgataaagactaacccccttacctta 154  Q
    | ||||||||||||||||||||||||||||||||||    
T  14842522 aagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 2050010 - 2050147
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||| ||||||||||||| |  || |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  2050010 catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaa 2050109  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2050110 tgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 12030210 - 12030073
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || ||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaa 12030111  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12030110 tgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  34 aaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 133  Q
    ||||||| || |||| || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  134 aagactaacccccttacctta 154  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  119 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 197  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 15859087 - 15858986
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||| ||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaa 15858989  T
Q  115 aat 117  Q
    |||    
T  15858988 aat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 51158081 - 51158008
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaatt 90  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| |||||||    
T  51158081 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 2449300 - 2449238
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  2449300 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  122 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctagcttca 183  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 17912545 - 17912483
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  17912545 catcaattcatgcatacaaacatatcatca-agttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 38810941 - 38810868
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 13954949 - 13954890
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||||| ||||||    
T  13954949 caattcatgcatacaa-catatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 13975781 - 13975722
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||||| ||||||    
T  13975781 caattcatgcatacaa-catatcatcaaagttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 15936690 - 15936634
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||||||| ||||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 45861009 - 45861068
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||||| ||||||    
T  45861009 caattcatgcatacaa-catatcatcaaagttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
Q  140 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 13301396 - 13301323
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13301396 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 13312052 - 13311979
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  13312052 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 41270275 - 41270327
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  41270275 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 55316419 - 55316471
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  55316419 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
T  3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 15550922 - 15550987
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttta 188  Q
    |||||||||| ||  |||||||||||| |||||||||| |||| | ||||| | ||||||||||||    
T  15550922 tgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttta 15550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 14059254 - 14059214
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  14059254 ttcatgcattcaaacataacatcataattggagcacgaatt 14059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 30207422 - 30207462
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  30207422 ttcatgcattcaaacataacatcataattggagcacgaatt 30207462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 20627376 - 20627190
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 115  Q
    ||||||||| |||||||||||||| || || |||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||| |||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaa 20627277  T
Q  116 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  20627276 atgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 43643020 - 43642833
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || | ||||||||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||    
T  43643020 catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaa 43642921  T
Q  115 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  43642920 aatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 462938 - 463075
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||| ||| || || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  462938 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 463037  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  463038 tgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 19794766 - 19794581
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaa 115  Q
    ||||||||||||||||||||||| || || |||||||||||||||||| | ||||| |||||| ||   |||||||||||||||||||||| ||||||||    
T  19794766 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaa-tttacaaa 19794668  T
Q  116 atgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  19794667 ataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 8891442 - 8891581
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    ||||||||||||||||||||||||  | || |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 8891541  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8891542 aatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 36982504 - 36982364
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 113  Q
    |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 36982405  T
Q  114 aaatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982404 aaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  58 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 24341452 - 24341309
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  24341452 catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 24341353  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  24341352 aaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 25265453 - 25265390
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 14906502 - 14906440
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  14906502 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 19689463 - 19689401
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  19689463 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 23820272 - 23820334
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  23820272 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 20015212 - 20015274
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||| |||||||| || || |||||||||||||||||||||||||| ||||||    
T  20015212 atcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 17396712 - 17396653
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||||| ||||||    
T  17396712 caattcatgcatacaa-catatcatcaaagttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
Q  143 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19886713 - 19886661
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  19886713 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  122 atgattatgataaagactaacccccttacctt 153  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 19666848 - 19666921
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | | |||||||||||||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctccta 19666921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
T  25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 31146138 - 31146032
Alignment:
Q  88 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactt 186  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  ||||||||||||||||| |||  || |    ||||| | ||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttagttagatcaattctctagcccaagcttcactt 31146041  T
Q  187 tagctccta 195  Q
    |||||||||    
T  31146040 tagctccta 31146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 68198 - 68238
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  68198 ttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 22775246 - 22775206
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  22775246 ttcatgcattcaaacataacatcataattggagcacgaatt 22775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 22780624 - 22780584
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  22780624 ttcatgcattcaaacataacatcataattggagcacgaatt 22780584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 9e-66; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 3060166 - 3060344
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||| ||||||||||| |||  | || |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  3060166 catcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaa 3060265  T
Q  117 tgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  3060266 tgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 16211966 - 16212103
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||    
T  16211966 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaa 16212065  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16212066 tgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 13037077 - 13036938
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 13036978  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  13036977 aatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 11580802 - 11580661
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac- 112  Q
    ||||||||||||||||||||||||  | || |||||||||||||||||||||| ||| |||||| ||    ||||||||||||||||||||||||||||     
T  11580802 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttaca 11580703  T
Q  113 aaaatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  11580702 aaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 36052864 - 36053003
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    ||||||||||||||||||||| || || || |||||||| |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36052864 catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaa 36052963  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36052964 aatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 47481094 - 47481031
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  47481094 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 11516428 - 11516490
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  11516428 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 13321216 - 13321278
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca 79  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| |||||    
T  13321216 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 15441626 - 15441564
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  15441626 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 30262191 - 30262129
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  30262191 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 13377819 - 13377924
Alignment:
Q  88 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcacttt 187  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  188 agctccta 195  Q
    ||||||||    
T  13377917 agctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 7293220 - 7293279
Alignment:
Q  21 aattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  7293220 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 36024372 - 36024485
Alignment:
Q  48 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 141  Q
    ||||||||||||||||||| |||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| ||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaa 36024471  T
Q  142 -cccccttacctta 154  Q
     |||||||||||||    
T  36024472 ccccccttacctta 36024485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 18253898 - 18253842
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||||||| ||||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 25292398 - 25292338
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||| |||||||||||| || || ||||||||||| |||||||||||||| ||||||    
T  25292398 caattcatacatacaaacatatcatcaaagttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 296029 - 295893
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat-caaaatt-catacaacatttgaaaatttacaa 114  Q
    |||| ||||||||| |||||||||||| |  | || || |||||||||||||||||| || ||| || ||||||| |||||||  |||||||||  | ||    
T  296029 catcgattcatgcacacaaacataacacctcaattagaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aa 295931  T
Q  115 aatgatgatgattatgataaagactaacccccttacct 152  Q
    ||||||||  |||||| | ||||| |||||||||||||    
T  295930 aatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 10989609 - 10989661
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  10989609 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  85 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
Q  139 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 2437657 - 2437710
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaa 69  Q
    |||||||||||||||||||||||||||| || |    |||||||||||||||||    
T  2437657 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 13377735 - 13377775
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  13377735 ttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 13911076 - 13911024
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || |    ||||||||||||||||    
T  13911076 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 14114021 - 14113989
Alignment:
Q  48 agttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||||| ||||||    
T  14114021 agttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 14423671 - 14423639
Alignment:
Q  48 agttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||||| ||||||    
T  14423671 agttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  122 atgattatgataaagactaacccccttac 150  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 16405038 - 16404852
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttacaa 16404939  T
Q  115 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    | | |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  16404938 a-taatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 16193779 - 16193643
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  16193779 catcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaa 16193680  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16193679 tgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 24928854 - 24928716
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaa 115  Q
    ||||||||||||||||||||||||  | || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  24928854 catcaattcatgcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaa 24928755  T
Q  116 atgatgatgattatgataaagactaacccccttacctta 154  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  24928754 atgacgatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 43373531 - 43373392
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    ||||||||||||||||||||| || || || |||||||||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaa 43373432  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43373431 aatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 5238288 - 5238350
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  5238288 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 22907276 - 22907214
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 24661310 - 24661248
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  24661310 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 43685747 - 43685809
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  43685747 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 17345769 - 17345832
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||| |||||||| ||||||    
T  17345769 catcaattcatgcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
T  17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
T  21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 6774309 - 6774258
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||||||||||||||||||||||||| || |||  |||||||||| |||||    
T  6774309 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 24549182 - 24549233
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||||||||||||||||||||||||| || |||  |||||||||| |||||    
T  24549182 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 30120922 - 30120974
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||| ||||||||||||||||||||||| || ||   ||||||||||||||||    
T  30120922 acataaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 54118307 - 54118120
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaa 54118208  T
Q  115 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  54118207 aataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 122089 - 122226
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  122089 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 122188  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  122189 tgatgatgattatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 13246634 - 13246769
Alignment:
Q  21 aattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatg 118  Q
    |||||||||||||||||||| || || ||||| |||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||    
T  13246634 aattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatg 13246733  T
Q  119 atgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||    
T  13246734 atgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15675152 - 15675009
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 15675053  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  15675052 aaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 33240900 - 33241043
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  33240900 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 33240999  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  33241000 aaatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 10104313 - 10104170
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||| ||||||||||||| |||||  ||   ||||||||||| ||||||||||| ||  ||    
T  10104313 catcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaa 10104214  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  10104213 aaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  48 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 141  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  142 cccccttacctta 154  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 10488763 - 10488825
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  10488763 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 16327988 - 16327926
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  16327988 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26680401 - 26680463
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 41165881 - 41165808
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
T  47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13048284 - 13048221
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||| ||||||||||||||||| ||    |||||||||| ||||||||||||||| ||||||    
T  13048284 catcaaatcatgcatacaaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 15045034 - 15045074
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  15045034 ttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40885614 - 40885570
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885614 caattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 47357854 - 47357906
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||| ||||||||||||||||||| || ||   ||||||||||||||||    
T  47357854 acatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 48798 - 48935
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 48897  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48898 tgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 41929 - 42066
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  41929 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 42028  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||| |||||||||||||||    
T  42029 tgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 3645 - 3508
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  3645 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaa 3546  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| ||||||||||| ||||||||||||||||||||||    
T  3545 tgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 1325 - 1462
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaa 116  Q
    |||||||||||||||| |||||| || || |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||    
T  1325 atcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaa 1424  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1425 tgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 172105 - 172242
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    ||||||||||| |||||||||||| || || |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  172105 catcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaa 172204  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  172205 tgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 177808 - 177945
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    ||||||||||| |||||||||||| || || |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  177808 catcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaa 177907  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  177908 tgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 51245 - 51110
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||| ||| || || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  51245 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaa 51146  T
Q  117 tgatgatgattatgataaagactaacccccttacct 152  Q
    ||||||||||||||||||||||||| | ||||||||    
T  51145 tgatgatgattatgataaagactaatctccttacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 128232 - 128095
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || ||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaa 128133  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  128132 tgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 247505 - 247366
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  247505 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 247406  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  247405 aatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 6127 - 5990
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||     
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaag 6028  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    |||  |||||||||||||||||||||||||||||||||    
T  6027 tgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 1019 - 882
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  |||     
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaag 920  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  919 tgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 7e-48; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 23153647 - 23153786
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||| |||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  23153647 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 23153746  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23153747 aatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 14626181 - 14626045
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    ||||||||||||||||||||||||||| || ||   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  |||     
T  14626181 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaag 14626082  T
Q  117 tgatgatgattatgataaagactaacccccttacctt 153  Q
    ||| ||||||| ||||||  |||||||||||||||||    
T  14626081 tgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  85 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 1657811 - 1657748
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  1657811 catcaattcatgcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 15862671 - 15862734
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| |||||||||||||| |||||| ||||||    
T  15862671 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 35009502 - 35009439
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||| ||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25175763 - 25175815
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||||||||||||||||||||||||||||| ||   ||||||||||||||||    
T  25175763 acatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 27751625 - 27751688
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || | || ||||||||||||||| ||| | ||||||    
T  27751625 catcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
T  22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||| |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
T  14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 16825804 - 16825752
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  16825804 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  122 atgattatgataaagactaacccccttacctt 153  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 154
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  124 gattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 18399144 - 18399184
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  18399144 ttcatgcattcaaacataacatcataattggagcacgaatt 18399184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 27654035 - 27653983
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||| ||||||| || ||   ||||||||||||||||    
T  27654035 acatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 26478 - 26340
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 115  Q
    |||||||||| ||||||||||||| || || |||||||||||||||||||||||||| || ||| || |||| |||||||||||||||||||||||||||    
T  26478 catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaa 26379  T
Q  116 atgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26378 atgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 8240 - 8180
Alignment:
Q  20 caattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  8240 caattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
T  6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 36976 - 36836
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaa 36877  T
Q  115 aatgatgatgattatgataaagactaacccccttaccttaa 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36876 aatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 23507165 - 23507302
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||||||||||||||||||||||| || || |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaa 23507264  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  23507265 tggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 27182610 - 27182471
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    ||||| |||||||||||||||||| || || |||||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||    
T  27182610 catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 27182511  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  27182510 aatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 18531130 - 18530988
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || |||    
T  18531130 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaa 18531031  T
Q  115 aatgatgat---gattatgataaagactaacccccttacctta 154  Q
    |||||||||   ||||||||| |||||||||||||||||||||    
T  18531030 aatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 22053896 - 22053753
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    ||||||||||| |||||||||||| || || |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || |||    
T  22053896 catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaa 22053797  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| |||||||||||||||||||||    
T  22053796 aaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 20623170 - 20623232
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  20623170 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 21233590 - 21233528
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  21233590 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 37052945 - 37053007
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  37052945 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 25900469 - 25900408
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcc 78  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||    
T  25900469 catcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 16536401 - 16536460
Alignment:
Q  21 aattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  16536401 aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 34939477 - 34939540
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||| | ||||||    
T  34939477 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 197  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 5450768 - 5450695
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
T  5450768 atgattatgatgaattctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 12574 - 12626
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  12574 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 19500099 - 19500151
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  19500099 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22366533 - 22366481
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  22366533 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 25426828 - 25426880
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  25426828 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 29188335 - 29188284
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||||||||||||||||||||||||| || |||  |||||||||| |||||    
T  29188335 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 18778044 - 18777995
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaattta 65  Q
    |||||||||||||||||||||||||||| || ||   |||||||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 43443447 - 43443398
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaattta 65  Q
    |||||||||||||||||||||||||||| || ||   |||||||||||||    
T  43443447 acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 4200037 - 4199985
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || |    ||||||||||||||||    
T  4200037 acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16595713 - 16595753
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  16595713 ttcatgcattcaaacataacatcataattggagcacgaatt 16595753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21073647 - 21073595
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    ||||| |||||||||||||||||||||| || ||   ||||||||||||||||    
T  21073647 acatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 9078 - 9215
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    |||| |||||||||||||||||||||| || |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaa 9177  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  9178 tgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 272225 - 272362
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaa 116  Q
    ||||||||||| |||||||||||| ||  | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||    
T  272225 catcaattcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaa 272324  T
Q  117 tgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  272325 tgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 89; Significance: 4e-43; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 89517 - 89378
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||| ||| || || |||||||||||||||||||||||||| |||||| ||   |||||||||| |||||||||||||||||||    
T  89517 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaa 89418  T
Q  115 aatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  89417 aatgatgatgatcatgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  29 catacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 126  Q
    |||||||| ||| || || |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  127 tatgataaagactaacccccttacctta 154  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  122 atgattatgataaagactaacccccttacctt 153  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 12313 - 12450
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 115  Q
    |||||||||||||||||||||||| || || |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaa 12411  T
Q  116 atgatgatgattatgataaagactaacccccttacctta 154  Q
    || | ||||||||||||||||||||||||||||||||||    
T  12412 attaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 19406 - 19543
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 113  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaa 19505  T
Q  114 aaatgatgatgattatgataaagactaacccccttacc 151  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  19506 aaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 21490 - 21553
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 146838 - 146938
Alignment:
Q  54 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 153  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
Q  154 a 154  Q
    |    
T  146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 9049 - 9192
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaa 114  Q
    |||||||||||||||||||||||| || || || ||||||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || |||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaa 9148  T
Q  115 a----atgatgatgattatgataaagactaacccccttacctta 154  Q
    |    ||||||||||||||||| ||||||||| | |||||||||    
T  9149 aaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 148921 - 149012
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 106  Q
    |||||||||||||||||||||||| || || ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 5124 - 4996
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaa 115  Q
    |||||||||| ||||||||||||| |  || |||||||| ||||||||||||||||| |||||| || |||| |||||||||||||||||||||||||||    
T  5124 catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaa 5025  T
Q  116 atgatgatgattatgataaagactaaccc 144  Q
    ||||| |||||||||||||||||||||||    
T  5024 atgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 123227 - 123087
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-a 113  Q
    |||||||||||||||||||||||| || || | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| |    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaa 123128  T
Q  114 aaatgatgatgattatgataaagactaacccccttacctta 154  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  123127 aaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  121 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  121 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 196  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 116483 - 116410
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 61; Significance: 2e-26; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 37128 - 37066
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 196  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 196  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  121 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||||||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 13706 - 13769
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5729 - 5785
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  5729 catcaattcatgcatacaaacataacatcaaagttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 597 - 534
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 5e-18; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26996 - 27058
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  26996 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 22741 - 22796
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  22741 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 1644 - 1582
Alignment:
Q  18 atcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  1644 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 41848 - 41911
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||| ||||||    
T  41848 catcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  114 aaatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 34523 - 34460
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||| ||||||    
T  34523 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 48387 - 48443
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 94 - 164
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 193  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 197  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  123 tgattatgataaagactaacccccttaccttaattatc 160  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 1436 - 1363
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 30417 - 30497
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 202  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 107947 - 108003
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaat 73  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||||||| ||||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattta 65  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 442 - 499
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
T  442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
T  76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  122 atgattatgataaagactaacccccttaccttaa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 1356 - 1304
Alignment:
Q  16 acatcaattcatgcatacaaacataacaacatagttggagcacgaatttagca 68  Q
    |||||||||||||||||||||||||||| || ||   ||||||||||||||||    
T  1356 acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 3394 - 3453
Alignment:
Q  21 aattcatgcatacaaacataacaacatagttggagcacgaatttagcaacaatcatccat 80  Q
    ||||||||||||||||| ||||| || || | |||||||||||||||| |||| ||||||    
T  3394 aattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  111 acaaaatgatgatgattatgataaagactaacccccttacctta 154  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 632 - 689
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
T  632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 6999 - 7056
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
T  6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaattt 64  Q
    |||||||||||||||||| || ||||||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 31357 - 31414
Alignment:
Q  138 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 195  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
T  31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 8011 - 8051
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  8011 ttcatgcattcaaacataacatcataattggagcacgaatt 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 3163 - 3215
Alignment:
Q  17 catcaattcatgcatacaaacataacaacatagttggagcacgaatttagcaa 69  Q
    |||||||||||| |||||||||||||| || ||   |||||||||||||||||    
T  3163 catcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 2357 - 2317
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  2357 ttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 3525 - 3565
Alignment:
Q  23 ttcatgcatacaaacataacaacatagttggagcacgaatt 63  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  3525 ttcatgcattcaaacataacatcataattggagcacgaatt 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 45338 - 45370
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    ||||||||||| |||||||||||||||||||||    
T  45338 atgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  122 atgattatgataaagactaacccccttacctta 154  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University