View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9467_low_7 (Length: 235)
Name: NF9467_low_7
Description: NF9467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9467_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 2427181 - 2426976
Alignment:
| Q |
13 |
cacagattttggaacaactacagatttcgatacattgggaaacaatgaagaagaaaatgtagaagatttggactttaaggatgaggaaagcatagaaagt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2427181 |
cacagattttggaacaactacagatttcgatacattgggaaacaatgaagaagaaaatgtagaagatttggactttaaggatgaggagagcatagaaagt |
2427082 |
T |
|
| Q |
113 |
ttggattttggttatgagccggatgattttggcgaagaagacgaagatataatgaatgagcttggaaaattagaagaagaaatcagacaggaagaatctc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2427081 |
ttggattttggttatgagccggatgattttggcgaagaagacgaagatataatgaatgagcttggaaaattagaagaagaaatcagacaggaagaatcgc |
2426982 |
T |
|
| Q |
213 |
tgaaac |
218 |
Q |
| |
|
|||||| |
|
|
| T |
2426981 |
tgaaac |
2426976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University