View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9468_low_26 (Length: 225)
Name: NF9468_low_26
Description: NF9468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9468_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 15127778 - 15127976
Alignment:
| Q |
10 |
gataatactcaatcttatgatatt---taactgataaaaactaaaatttacaatttgtcaaaacctaatgtannnnnnnn-acaagttaaaatgaattat |
105 |
Q |
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| T |
15127778 |
gataatactcaatcttatgatattaattaactgataaaaactaaaatttacaatttgtcaaaacctaatgtattttttttgacaagctaaaatgaatt-- |
15127875 |
T |
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| Q |
106 |
tgctggnnnnnnnnnnncaagttaacatgaaattatattaaagataccaaccaagcattctcctcagtacaagatgtgctaaacaaaagcgctttacagt |
205 |
Q |
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| T |
15127876 |
-gctaaaaaaaaaaaaacaagttaacatgaaattatattaaagataccaaccaagcattctcctcagtacaaaatgtgctaaacataagcgctttacagt |
15127974 |
T |
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