View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9468_low_8 (Length: 352)

Name: NF9468_low_8
Description: NF9468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9468_low_8
NF9468_low_8
[»] chr3 (15 HSPs)
chr3 (1-333)||(25349862-25350187)
chr3 (1-136)||(43797504-43797639)
chr3 (1-146)||(4041335-4041480)
chr3 (1-133)||(29828833-29828965)
chr3 (1-122)||(46883564-46883685)
chr3 (1-135)||(53197003-53197137)
chr3 (1-146)||(38499823-38499967)
chr3 (1-122)||(8799468-8799589)
chr3 (1-108)||(43797685-43797792)
chr3 (38-146)||(38500011-38500118)
chr3 (39-145)||(53197175-53197279)
chr3 (39-136)||(43797366-43797463)
chr3 (1-108)||(20383184-20383294)
chr3 (39-108)||(46883457-46883526)
chr3 (42-146)||(8799321-8799425)
[»] chr1 (23 HSPs)
chr1 (1-146)||(3385463-3385608)
chr1 (1-146)||(24883121-24883265)
chr1 (1-134)||(33401009-33401141)
chr1 (1-117)||(34970137-34970253)
chr1 (1-134)||(27171815-27171948)
chr1 (1-108)||(13946964-13947071)
chr1 (1-136)||(37948802-37948937)
chr1 (1-136)||(33156607-33156741)
chr1 (1-146)||(39781074-39781213)
chr1 (1-146)||(49776823-49776967)
chr1 (1-108)||(43297003-43297110)
chr1 (1-102)||(38338819-38338920)
chr1 (8-59)||(42082904-42082955)
chr1 (39-136)||(49777013-49777110)
chr1 (39-136)||(33400869-33400968)
chr1 (39-134)||(34970001-34970096)
chr1 (43-108)||(37948982-37949047)
chr1 (44-136)||(5771922-5772014)
chr1 (39-102)||(38338715-38338778)
chr1 (42-134)||(3385324-3385419)
chr1 (39-108)||(13947112-13947181)
chr1 (39-108)||(27171989-27172058)
chr1 (74-146)||(24882975-24883047)
[»] chr2 (19 HSPs)
chr2 (1-133)||(21265714-21265846)
chr2 (1-146)||(22563214-22563359)
chr2 (1-130)||(29892820-29892948)
chr2 (1-136)||(20296276-20296411)
chr2 (1-136)||(17200230-17200364)
chr2 (1-127)||(156971-157096)
chr2 (1-146)||(34645551-34645695)
chr2 (39-136)||(12232577-12232673)
chr2 (5-108)||(8237886-8237988)
chr2 (1-108)||(12232714-12232821)
chr2 (39-146)||(17200082-17200189)
chr2 (1-59)||(13979723-13979781)
chr2 (39-136)||(21265577-21265673)
chr2 (39-146)||(29892989-29893094)
chr2 (39-146)||(22563400-22563507)
chr2 (53-146)||(4371458-4371551)
chr2 (39-146)||(34645736-34645843)
chr2 (39-133)||(20296606-20296700)
chr2 (98-136)||(33491417-33491455)
[»] chr8 (15 HSPs)
chr8 (1-136)||(14999185-14999320)
chr8 (1-146)||(41721979-41722124)
chr8 (1-146)||(43801623-43801768)
chr8 (4-117)||(40621682-40621795)
chr8 (1-136)||(41403911-41404047)
chr8 (1-117)||(6911181-6911297)
chr8 (1-134)||(16324996-16325131)
chr8 (1-122)||(22781206-22781325)
chr8 (39-136)||(6911043-6911140)
chr8 (1-58)||(8489525-8489582)
chr8 (48-146)||(15009057-15009155)
chr8 (39-136)||(16324858-16324955)
chr8 (39-136)||(8489387-8489484)
chr8 (39-134)||(41403775-41403870)
chr8 (74-134)||(43801486-43801546)
[»] chr6 (8 HSPs)
chr6 (1-136)||(22748740-22748875)
chr6 (1-146)||(16125526-16125671)
chr6 (1-102)||(11014369-11014470)
chr6 (4-108)||(24565259-24565361)
chr6 (39-146)||(22748592-22748699)
chr6 (42-113)||(33277343-33277414)
chr6 (4-47)||(34851461-34851504)
chr6 (9-49)||(33277465-33277505)
[»] chr5 (15 HSPs)
chr5 (1-144)||(36955446-36955589)
chr5 (1-146)||(31193969-31194114)
chr5 (1-128)||(39634827-39634952)
chr5 (1-136)||(14076820-14076956)
chr5 (1-108)||(42546391-42546498)
chr5 (1-59)||(32346988-32347046)
chr5 (1-56)||(304163-304218)
chr5 (39-146)||(17370071-17370178)
chr5 (39-146)||(31194155-31194262)
chr5 (1-49)||(17370219-17370267)
chr5 (39-136)||(8754672-8754769)
chr5 (39-133)||(39634993-39635086)
chr5 (39-136)||(32347087-32347184)
chr5 (82-146)||(36955307-36955371)
chr5 (39-117)||(42546539-42546617)
[»] chr4 (26 HSPs)
chr4 (4-146)||(5465857-5465999)
chr4 (1-145)||(46993221-46993365)
chr4 (1-136)||(24673874-24674008)
chr4 (8-146)||(11789863-11790001)
chr4 (1-117)||(9551257-9551373)
chr4 (1-108)||(26297465-26297572)
chr4 (1-59)||(19037813-19037871)
chr4 (1-101)||(1024956-1025055)
chr4 (1-108)||(3556516-3556624)
chr4 (4-146)||(23655222-23655365)
chr4 (41-145)||(46993072-46993176)
chr4 (2-59)||(21785799-21785854)
chr4 (1-51)||(32591247-32591297)
chr4 (42-136)||(50544270-50544364)
chr4 (39-123)||(11790052-11790136)
chr4 (5-136)||(17914906-17915035)
chr4 (1-57)||(53769537-53769593)
chr4 (74-145)||(54316054-54316125)
chr4 (39-133)||(1025096-1025190)
chr4 (43-146)||(7061976-7062079)
chr4 (8-136)||(42475890-42476007)
chr4 (75-136)||(50551478-50551539)
chr4 (42-146)||(9551418-9551522)
chr4 (39-117)||(32591338-32591417)
chr4 (81-122)||(5466081-5466122)
chr4 (39-108)||(17914755-17914824)
[»] chr7 (16 HSPs)
chr7 (1-116)||(6408406-6408521)
chr7 (3-136)||(35207332-35207462)
chr7 (1-146)||(19318299-19318445)
chr7 (1-134)||(26903447-26903577)
chr7 (1-122)||(48006276-48006397)
chr7 (39-146)||(35207182-35207289)
chr7 (1-146)||(35363322-35363467)
chr7 (1-136)||(2834353-2834486)
chr7 (31-146)||(25048205-25048321)
chr7 (1-51)||(29474512-29474562)
chr7 (42-108)||(35363511-35363577)
chr7 (39-136)||(19318161-19318258)
chr7 (39-136)||(29474603-29474699)
chr7 (43-136)||(39983836-39983924)
chr7 (39-136)||(6408267-6408365)
chr7 (82-146)||(19318452-19318516)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 25349862 - 25350187
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||  ||| |||||   ||||||  ||||| |||||||||||||    
T  25349862 ttgtttgttattattatgtatttttgttaaacaaatatttattttttaatttaaaatctcaaccgttagatgtttttttggcacatgtcttacatccaaa 25349961  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccgagttactttttgagatgctaccatgatg--agggtggtaatgttggtatctcata 198  Q
    ||||||||| | ||||| |||||||   |||||||| | ||||| |           ||||||||||||| ||  |||||||||||||||||||||||||    
T  25349962 ccctaaatagaataaatggagcttaatttaaatggagcatacccaaa----------agatgctaccatggtgtgagggtggtaatgttggtatctcata 25350051  T
Q  199 ttttgtggcttactgtttctgttggtggagtttcagcttgaaaatgaattttctaacttattctaacccttgaaa-ttgaaagtatggtggaaagtatat 297  Q
    ||||| |  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25350052 ttttgagtgttactgtttctgttgatggagtttcagcttgaaaatgaattttctaacttattctaacccttgaaagttgaaagtatggtggaaagtatat 25350151  T
Q  298 tcgtaagtcttagacttgtagccagcatatgatgtc 333  Q
    || |||||||||||||||||||||||||||||||||    
T  25350152 tcttaagtcttagacttgtagccagcatatgatgtc 25350187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 43797504 - 43797639
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| || || ||||||||  ||||| |||| ||||||||    
T  43797504 ttgtttgttattattatgtatttttattaaacaaatatttggtttttaatttaaaatcttaaccgttggatacttttttgtcacatgtctttcatccaaa 43797603  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||| ||||||| || |||||||||||||||    
T  43797604 ccctaaatagagtaaatggatcttagcctaaatgga 43797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4041335 - 4041480
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||    
T  4041335 ttgtttgttattattatgtatttttagtaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaa 4041434  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  |||||||  ||||||||||||||||| | |||||||    
T  4041435 ccctaaatggagtaaatgaagcttagcctaaatggagcatacccga 4041480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 29828833 - 29828965
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | |||||| ||||||||||||||||||||    
T  29828833 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatatcttacatccaaa 29828932  T
Q  101 ccctaaataaagtaaattgagcttagcctaaat 133  Q
     |||||||  | ||||| ||||||||| |||||    
T  29828933 tcctaaatggaataaatggagcttagcttaaat 29828965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 46883564 - 46883685
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||    
T  46883564 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaa 46883663  T
Q  101 ccctaaataaagtaaattgagc 122  Q
    ||||||||  ||||||| ||||    
T  46883664 ccctaaatggagtaaatggagc 46883685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53197137 - 53197003
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| | || ||||||||    
T  53197137 ttgtttgttattattatgtatttttattaaataaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgttttgcatccaaa 53197038  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgg 135  Q
    ||||||||| |||||||  || ||||| |||||||    
T  53197037 ccctaaatagagtaaatgaagtttagcttaaatgg 53197003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 38499967 - 38499823
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||  ||| |||| |  |||||| |||||| ||||  |||||||    
T  38499967 ttgtttgttattattatgtatttttattaaacaaatatttggtttttagtttaaaatctcaaccgttag-attttttttgccacatgtcttgtatccaaa 38499869  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  ||||||| |||||||||||||||||| | |||||||    
T  38499868 ccctaaatggagtaaatggagcttagcctaaatggagcatacccga 38499823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8799468 - 8799589
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||| | | |||||| |||||| |||| |||| |||    
T  8799468 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttatatatttttttgccacatgtcttgcatctaaa 8799567  T
Q  101 ccctaaataaagtaaattgagc 122  Q
    ||||||||  ||||||| ||||    
T  8799568 ccctaaatggagtaaatggagc 8799589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43797792 - 43797685
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |  ||||||||| | |||||| |||||| |||||||||||||    
T  43797792 ttgtttgttattattatgtaattttattaaacaaatatttattttttaatttaaaatttcaaccattagatatttttttgccacatgtcttacatccaaa 43797693  T
Q  101 ccctaaat 108  Q
    || |||||    
T  43797692 ccttaaat 43797685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 38500011 - 38500118
Alignment:
Q  38 tttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaa 137  Q
    ||||||||||||||||||||||  ||  ||||| | |||||| |||||| ||||||||||||||||||| |  ||||||| ||||||||||||||||||     
T  38500011 tttgttttttaatttaaaatctcaactgttagatattttttt-ccacatgtcttacatccaaaccctaattggagtaaatggagcttagcctaaatggag 38500109  T
Q  138 cgtacccga 146  Q
    | |||||||    
T  38500110 catacccga 38500118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 53197175 - 53197279
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||||||  ||||| | |||||| |||||| |||| ||||||||||||||||  |||||||  ||||||||||||||||| |    
T  53197175 ttgttttttaatttaaaatcttgacg-ttagata-ttttttgccacatgtcttgcatccaaaccctaaatggagtaaatgaagcttagcctaaatggagc 53197272  T
Q  139 gtacccg 145  Q
     ||||||    
T  53197273 atacccg 53197279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 43797463 - 43797366
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  ||| || || | |||||| |||||| |||| |||||||||| |||||  ||||||| ||||||||||||||||||    
T  43797463 ttgttttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttgcatccaaaccttaaatggagtaaatggagcttagcctaaatgga 43797366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20383184 - 20383294
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaa-atat--ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatcc 97  Q
    |||||||||||||||||||||||| |||||| || || |  || ||||||||||||||||||  ||| ||||| ||||||||||||||  |||| |||||    
T  20383184 ttgtttgttattattatgtatttttattaaataatattttatttttttttaatttaaaatctcaaccgttagatacttttttaccacacgtctttcatcc 20383283  T
Q  98 aaaccctaaat 108  Q
    |||| ||||||    
T  20383284 aaactctaaat 20383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 46883526 - 46883457
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||||||||||||||||||||    
T  46883526 ttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttacatccaaaccctaaat 46883457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 8799425 - 8799321
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgta 141  Q
    ||||||||||||||||||  ||  ||||| |  ||||| |||||| |||| ||||||||||||||||  ||||||| |||| ||||||||||||| | ||    
T  8799425 ttttttaatttaaaatctcaactgttagatatatttttgccacatgtcttgcatccaaaccctaaatggagtaaatggagcctagcctaaatggagcata 8799326  T
Q  142 cccga 146  Q
    |||||    
T  8799325 cccga 8799321  T

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Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3385463 - 3385608
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||| ||||| | |||||||||||||||||||||||||||    
T  3385463 ttgtttgttattattatgtatttttattaaacaaatatttattttttaatttaaaatctcaaccgttagatatttttttaccacatatcttacatccaaa 3385562  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  ||||||| |||||| ||||||||||| | |||||||    
T  3385563 ccctaaatggagtaaatggagcttggcctaaatggagcatacccga 3385608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24883121 - 24883265
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||| ||||| | |||||| ||||||||||| ||||||||    
T  24883121 ttgtttgttattattatgtatttttattaaacaaatattt-ttttttaatttaaaatctcaaccgttagatatttttttgccacatatcttgcatccaaa 24883219  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  ||||||| |||||||||||||||||||| |||||||    
T  24883220 ccctaaatggagtaaatggagcttagcctaaatggaacatacccga 24883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33401009 - 33401141
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||| |   |||||| |||||| ||||||||| |||    
T  33401009 ttgtttgttattattatgtatttttattaaacaaatatttattttttaatttaaaatcttaaccgtta-atttttttttgccacatgtcttacatctaaa 33401107  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatg 134  Q
    || |||||||||||||||||||||||||||||||    
T  33401108 ccttaaataaagtaaattgagcttagcctaaatg 33401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34970137 - 34970253
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||| | |||||| |||||| |||||||||||||    
T  34970137 ttgtttgttattattatgtatttttattaaacaaatatttattttttaatttaaaatcttaaccgttagatatttttttgccacatgtcttacatccaaa 34970236  T
Q  101 ccctaaataaagtaaat 117  Q
    || ||||||||||||||    
T  34970237 ccttaaataaagtaaat 34970253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27171948 - 27171815
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||| ||||| | |||||| |||||| |||||||||||||    
T  27171948 ttgtttgttattattatgtatttctgttaaacaaatatttgttttttaatttaaaatctcgaccgttagatatttttttgccacatgtcttacatccaaa 27171849  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatg 134  Q
    || |||||  |||||||  |||||||||||||||    
T  27171848 ccataaatggagtaaatgaagcttagcctaaatg 27171815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13947071 - 13946964
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| |||||||||||||    
T  13947071 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttacatccaaa 13946972  T
Q  101 ccctaaat 108  Q
    ||||||||    
T  13946971 ccctaaat 13946964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 37948937 - 37948802
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | |||||| | |||| |||||||||||||    
T  37948937 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgcaacatgtcttacatccaaa 37948838  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    || |||||  |||||||  |||||| | ||||||||    
T  37948837 ccttaaattgagtaaatgaagcttaacttaaatgga 37948802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 33156607 - 33156741
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| |  |||||| |||||| ||||  |||||||    
T  33156607 ttgtttgttatcattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttag-attttttttgccacatgtcttgtatccaaa 33156705  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||  |||||||  |||||||||||||||||    
T  33156706 ccctaaatggagtaaataaagcttagcctaaatgga 33156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39781213 - 39781074
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |      |||||||||||||| |||  ||||||||    
T  39781213 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgt------cttttttaccacatgtctcgcatccaaa 39781120  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    | |||||| ||||||||  | ||||  ||||||| ||| |||||||    
T  39781119 ctctaaatgaagtaaatgaaacttaatctaaatgaaacatacccga 39781074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 49776967 - 49776823
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||| || | ||||||||||||||||  ||| ||  | | ||||||||||||| |||| ||||||||    
T  49776967 ttgtttgttattattatgtatttttattaaacaaata-ttatcttttaatttaaaatctcaaccgttcaatatttttttaccacatgtcttgcatccaaa 49776869  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
     |||||||  |||||||  |||||||| |||||||| | |||||||    
T  49776868 tcctaaatggagtaaataaagcttagcttaaatggagcatacccga 49776823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43297003 - 43297110
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||  ||| ||||| | ||||||  ||||| |||| ||||||||    
T  43297003 ttgtttgttattattgtgtatttttattaaataaatatttgttttttaatttaaaatctcaaccgttagatatttttttggcacatgtcttgcatccaaa 43297102  T
Q  101 ccctaaat 108  Q
     |||||||    
T  43297103 tcctaaat 43297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38338819 - 38338920
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |  ||  ||||| | |||||| |||||| |||||||||||||    
T  38338819 ttgtttgatattattatgtatttttattaaacaaatatttattttttaatttaaaatttcaactgttagatatttttttgccacatgtcttacatccaaa 38338918  T
Q  101 cc 102  Q
    ||    
T  38338919 cc 38338920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 42082955 - 42082904
Alignment:
Q  8 ttattattatgtattttcattaaacaaatatttgttttttaatttaaaatct 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42082955 ttattattatgtatttttattaaacaaatatttgttttttaatttaaaatct 42082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 49777013 - 49777110
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  ||| ||||| | ||||||  ||||| |||| ||||||||||||||||| | ||||| ||| ||||||||||||||    
T  49777013 ttgttttttaatttaaaatctcaaccgttagatatttttttgtcacatgtcttgcatccaaaccctaaatagaataaatggagtttagcctaaatgga 49777110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 33400968 - 33400869
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaactttttta--ccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||| ||||||||||| ||||||||| ||||||||   ||||||  |||||||||||||| |||||  ||||||| ||||||||| ||||||||    
T  33400968 ttgttttttagtttaaaatcttaaccattagatacttttttttgccacatgccttacatccaaaccttaaatggagtaaatggagcttagcttaaatgga 33400869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 34970096 - 34970001
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatg 134  Q
    |||||||||||||||||||||  ||| ||||| | ||||||||||||| |||| |||||||| |||||||  ||||||| ||| ||| ||||||||    
T  34970096 ttgttttttaatttaaaatctcaaccgttagatatttttttaccacatgtcttgcatccaaatcctaaattgagtaaatggagtttaacctaaatg 34970001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 37948982 - 37949047
Alignment:
Q  43 tttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    |||||||||||||||||| ||||||||| | || ||| |||||| |||||||||||| ||||||||    
T  37948982 tttttaatttaaaatcttaaccattagatatttgtttgccacatgtcttacatccaagccctaaat 37949047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 5772014 - 5771922
Alignment:
Q  44 ttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||||||||||  ||| ||||| | |||||| ||| ||||||||||| ||||| ||||||  |||||||  ||||||| |||||||||    
T  5772014 ttttaatttaaaatctcaaccgttagatatttttttgccatatatcttacattcaaactctaaatggagtaaatgaagcttagtctaaatgga 5771922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 38338778 - 38338715
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaacc 102  Q
    |||||||||||||||||||||  ||| ||||| | |||||| ||| ||||||||||||||||||    
T  38338778 ttgttttttaatttaaaatctcaaccgttagatatttttttgccatatatcttacatccaaacc 38338715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 3385419 - 3385324
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaa---cttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatg 134  Q
    ||||||||||||||||||| ||| ||||| |    |||||| |||||| |||||||||||||||||||||   |||||   |||||||||||||||    
T  3385419 ttttttaatttaaaatcttaaccgttagatattttttttttgccacatgtcttacatccaaaccctaaatggggtaaacgaagcttagcctaaatg 3385324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 13947112 - 13947181
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    ||||||||||||||||||| |  ||| ||| | | ||||||||||||| |||||||||||||| ||||||    
T  13947112 ttgttttttaatttaaaatatcaaccgttacatatttttttaccacatgtcttacatccaaacgctaaat 13947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 27171989 - 27172058
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    ||||||||||||| |||||||  ||| ||||| | |||||| |||||| ||||||||||||||| |||||    
T  27171989 ttgttttttaattgaaaatctcaaccgttagatatttttttgccacatgtcttacatccaaaccttaaat 27172058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 24883047 - 24882975
Alignment:
Q  74 ttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    |||||| |||| | |||| ||||||||||||||||  ||||||| ||| |||||||||||||| | |||||||    
T  24883047 ttttttgccacgtgtcttgcatccaaaccctaaatggagtaaatggagattagcctaaatggagcatacccga 24882975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21265714 - 21265846
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||| |||| ||||||||    
T  21265714 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccattagatacttttttgccacatgtcttgcatccaaa 21265813  T
Q  101 ccctaaataaagtaaattgagcttagcctaaat 133  Q
    ||||||||| ||||||| ||||||||| |||||    
T  21265814 ccctaaatagagtaaatggagcttagcttaaat 21265846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 22563359 - 22563214
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||| ||| | | |||||| |||||| |||| ||||||||    
T  22563359 ttgtttgttattattatgtagttttattaaacaaatatttgttttttaatttaaaatctcaaccgttaaatatttttttgccacatgtcttgcatccaaa 22563260  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  ||||||| |||||||||||||||||| | |||||||    
T  22563259 ccctaaatggagtaaatggagcttagcctaaatggagcatacccga 22563214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29892948 - 29892820
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  29892948 ttgtttgttattattatgtatttttattaaataaatatttattttttaatttaaaatctcgaccattagata-tttttttccacatatcttacatccaaa 29892850  T
Q  101 ccctaaataaagtaaattgagcttagccta 130  Q
     |||||||||| ||||| ||||||| ||||    
T  29892849 tcctaaataaaataaatggagcttaaccta 29892820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20296411 - 20296276
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||| || || |||||||| ||| || |||| ||||||||    
T  20296411 ttgtttgttattattatgtatttttattaaacaaatattcggtttttaatttaaaatcttaaccgttggatacttttttgccatatgtctttcatccaaa 20296312  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||| |||||||| || ||||||| |||||||    
T  20296311 ccctaaatgaagtaaatggatcttagccaaaatgga 20296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 17200230 - 17200364
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |  | | ||||| | |||||| |||||| |||||||||||||    
T  17200230 ttgtttgttattattatgtatttttattaaacaaatatctgttttataatttaaaatatcaatcgttagatatttttttgccacatgtcttacatccaaa 17200329  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    || |||||  ||||||| |||||||| |||||||||    
T  17200330 ccttaaatggagtaaatggagcttag-ctaaatgga 17200364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 157096 - 156971
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||| ||||| | |||| | ||| || |||||||||||||    
T  157096 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttcaaatctcaaccgttagatatttttctgcca-atgtcttacatccaaa 156998  T
Q  101 ccctaaataaagtaaattgagcttagc 127  Q
     |||||||  ||||||| |||||||||    
T  156997 tcctaaatggagtaaatggagcttagc 156971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 34645695 - 34645551
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  | | ||||| | |||||| |||||| |||| |||||| |    
T  34645695 ttgtttgttattattatgtatttttattaaataaatatttgttttttaatttaaaatctcaatcgttagata-ttttttgccacatgtcttgcatccata 34645597  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||  ||||||| || |||| ||||||| || | |||||||    
T  34645596 ccctaaatggagtaaatagaacttaacctaaatagagcatacccga 34645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 12232673 - 12232577
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12232673 ttgttttttaatttaaaatctcaaccgttagata-ttttttgccacatgtcttacatccaaaccctaaatagagtaaatggagcttagcctaaatgga 12232577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 8237988 - 8237886
Alignment:
Q  5 ttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccct 104  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  || |||||| |||||||| |||||| |||| ||||| || |||    
T  8237988 ttgttattattatgtatttttattaaacaaatatttgt-ttttaatttaaaatctcaactattagatacttttttgccacatgtcttgcatcctaatcct 8237890  T
Q  105 aaat 108  Q
    ||||    
T  8237889 aaat 8237886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12232714 - 12232821
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||   |  ||||| | |||||| |||||| |||| |||| |||    
T  12232714 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaatatctcacctgttagatatttttttgccacatgtcttgcatctaaa 12232813  T
Q  101 ccctaaat 108  Q
     |||||||    
T  12232814 tcctaaat 12232821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 17200189 - 17200082
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||||||||| | || ||| |||||| ||||||||||||| |||||||  ||||||| |||||| ||||||||||| |    
T  17200189 ttgttttttaatttaaaatctcaaccattagatatttatttgccacatgtcttacatccaaatcctaaatggagtaaatggagctttgcctaaatggagc 17200090  T
Q  139 gtacccga 146  Q
     |||||||    
T  17200089 atacccga 17200082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13979781 - 13979723
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatct 59  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  13979781 ttgtttgttattattatgtatttttattaaacaaatatttattttttaatttaaaatct 13979723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 21265673 - 21265577
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||||||||||  |||||||||||||||| |||||||||    
T  21265673 ttgttttttaatttaaaatctcaaccgttagata-ttttttgccacatgtcttgcatccaaaccctaaatggagtaaattgagcttagtctaaatgga 21265577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 29892989 - 29893094
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| ||||| | |||| |  ||||| |||| ||||||||||||||||| ||||||| |||||||||||||||||| |    
T  29892989 ttgttttttaatttaaaatctcaaccgttagatatttttgt--cacatgtcttgcatccaaaccctaaatagagtaaatagagcttagcctaaatggagc 29893086  T
Q  139 gtacccga 146  Q
     |||||||    
T  29893087 atacccga 29893094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 22563400 - 22563507
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| |||||||| |||||||  ||||||| ||| |||||||||||||| |    
T  22563400 ttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaatcctaaatggagtaaatggagtttagcctaaatggagc 22563499  T
Q  139 gtacccga 146  Q
     |||||||    
T  22563500 atacccga 22563507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 4371551 - 4371458
Alignment:
Q  53 aaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    |||||||  ||||||||| | |||||| |||||| |||| ||||||||||||||||  ||||||| |||||||||||||||||| | |||||||    
T  4371551 aaaatctcaaccattagatatttttttgccacatgtcttgcatccaaaccctaaatggagtaaatggagcttagcctaaatggagcatacccga 4371458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 34645736 - 34645843
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| ||||| | ||| || |||||| |||||||||||||||||||||  | ||||| ||| | |||||||||||||     
T  34645736 ttgttttttaatttaaaatctcaaccgttagatattttcttgccacatgtcttacatccaaaccctaaatggaataaatggagttaagcctaaatggaat 34645835  T
Q  139 gtacccga 146  Q
     |||||||    
T  34645836 atacccga 34645843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 20296606 - 20296700
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaat 133  Q
    |||||||||||||||||||||  ||| || || | |||||| |||||| ||||||||||||  | |||||  ||||||| |||||||||||||||    
T  20296606 ttgttttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttacatccaattcttaaatggagtaaatggagcttagcctaaat 20296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 33491417 - 33491455
Alignment:
Q  98 aaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  33491417 aaaccctaaatagagtaaatggagcttagcctaaatgga 33491455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14999320 - 14999185
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  || |||||| ||||| || |||||| |||| ||||||||    
T  14999320 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaactattagatactttattgccacatgtcttgcatccaaa 14999221  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||  ||||||||||||||||||||||||||    
T  14999220 ccctaaatggagtaaattgagcttagcctaaatgga 14999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 41721979 - 41722124
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||| | |||||| | |||| |||| |||||||     
T  41721979 ttgtttgttattattatgtatttttattaaacaaatatttgtttttttatttaaaatcttaaccgttagatatttttttgcaacatgtcttgcatccaag 41722078  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    | ||||||||||||||| |||||||||||||||| ||| |||||||    
T  41722079 ctctaaataaagtaaatagagcttagcctaaatgaaacatacccga 41722124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43801623 - 43801768
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |  ||  ||||| | |||||| ||||||||||| ||||||||    
T  43801623 ttgtttgttattattatgtatttttattaaacaaatattagttttttaatttaaaatttcaactgttagatatttttttgccacatatcttgcatccaaa 43801722  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    | ||||||  ||||||| |||||||||||||||||||| |||||||    
T  43801723 ctctaaatggagtaaatggagcttagcctaaatggaacatacccga 43801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 40621682 - 40621795
Alignment:
Q  4 tttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccc 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | ||||||||||||| | |||||| |||||||    
T  40621682 tttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttaccacatgttttacattcaaaccc 40621781  T
Q  104 taaataaagtaaat 117  Q
    ||||| ||||||||    
T  40621782 taaatgaagtaaat 40621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41403911 - 41404047
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttt-tttaccacatatcttacatccaa 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||| | | ||| |||  ||||| |||| |||||||    
T  41403911 ttgtttgttattattatgtatttttattaaacaaatatttgtttttaaatttaaaatctcaaccgttaaatattttgtttgtcacatgtcttgcatccaa 41404010  T
Q  100 accctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||| |||||||||| |||| ||||||||||    
T  41404011 accctaaatagagtaaattgaacttaacctaaatgga 41404047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6911181 - 6911297
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| || || | |||||| |||||| |||| ||||||||    
T  6911181 ttgtttgtaattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttgcatccaaa 6911280  T
Q  101 ccctaaataaagtaaat 117  Q
    ||||||||  |||||||    
T  6911281 ccctaaatggagtaaat 6911297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 16324996 - 16325131
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttacc--acatatcttacatcca 98  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||| ||||| | |||||||||  |||| |||| ||||||    
T  16324996 ttgtttgttattattatgtatttttatcaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttaccatacatgtcttgcatcca 16325095  T
Q  99 aaccctaaataaagtaaattgagcttagcctaaatg 134  Q
    ||||||||||  ||||||| ||| || || ||||||    
T  16325096 aaccctaaatggagtaaatggagtttggcttaaatg 16325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22781206 - 22781325
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||| ||| ||  ||||||  |||||||||| ||||||||    
T  22781206 ttgtttgttattattatatatttt-attaaacaaatatttgttttttaatttaaaatctcaaccgtta-aatattttttgtcacatatcttgcatccaaa 22781303  T
Q  101 ccctaaataaagtaaattgagc 122  Q
    ||||||||  ||||||| ||||    
T  22781304 ccctaaattgagtaaatggagc 22781325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 6911140 - 6911043
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  | | ||||| | |||||| |||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  6911140 ttgttttttaatttaaaatctcaatcgttagatatttttttgccacatgtcttacatccaaaccctaaatggagtaaatggagcttagcctaaatgga 6911043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8489525 - 8489582
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatc 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8489525 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatc 8489582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 15009057 - 15009155
Alignment:
Q  48 aatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||||||||| ||  ||||| |||||||| |||||| |||||||||||||||||||||  |||||||  ||||||||||||||||| | |||||||    
T  15009057 aatttaaaatcttaactgttagatacttttttgccacatgtcttacatccaaaccctaaatggagtaaatgaagcttagcctaaatggagcatacccga 15009155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 16324955 - 16324858
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  ||| ||||| | ||||||  ||||| |||| ||||||||||||||||  | ||||||||||||||||||||||||    
T  16324955 ttgttttttaatttaaaatctcaaccgttagatatttttttgtcacatgtcttgcatccaaaccctaaatggattaaattgagcttagcctaaatgga 16324858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 8489484 - 8489387
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  | | ||||| | |||||| |||||| |||||||||||||||||||||  | |||||  |||||| ||||||||||    
T  8489484 ttgttttttaatttaaaatctcaatcgttagatatttttttgccacatgtcttacatccaaaccctaaatggaataaatgaagcttaacctaaatgga 8489387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 41403870 - 41403775
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatg 134  Q
    |||||||||||||||||||||  ||  ||||| | ||||||  ||||||||||||||| ||| |||||||  |||||||||||||||  |||||||    
T  41403870 ttgttttttaatttaaaatctcaactgttagatatttttttgtcacatatcttacatcaaaatcctaaatggagtaaattgagcttaatctaaatg 41403775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 43801546 - 43801486
Alignment:
Q  74 ttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatg 134  Q
    |||||| |||||| |||||||||||||| ||||||  |||||||  || ||||||||||||    
T  43801546 ttttttgccacatgtcttacatccaaactctaaatggagtaaatgaagtttagcctaaatg 43801486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22748740 - 22748875
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| || ||  |||||||||||||| |||| ||||||||    
T  22748740 ttgtttgttattattatgtatttttattaaacaaatatttgatttttaatttaaaatcttaaccgttggatgcttttttaccacatgtctttcatccaaa 22748839  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
     |||||||  ||||||| || ||||| |||||||||    
T  22748840 tcctaaatggagtaaatggatcttagtctaaatgga 22748875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16125671 - 16125526
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  | | ||| | | |||||| |||||| |||| ||||||||    
T  16125671 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatttcaatcgttaaatatttttttgccacatgtcttgcatccaaa 16125572  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    |||||||| || |||||  || |||||||||||||| | |||||||    
T  16125571 ccctaaatgaaataaatgaagtttagcctaaatggagcatacccga 16125526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11014470 - 11014369
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    ||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||  ||  ||| | | ||||||| ||||| |||||||||||||    
T  11014470 ttgtttgttattattatgtgtttttattaaacaaatatttactttttaatttaaaatctcaactgttaaatatttttttatcacatgtcttacatccaaa 11014371  T
Q  101 cc 102  Q
    ||    
T  11014370 cc 11014369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 24565259 - 24565361
Alignment:
Q  4 tttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccc 103  Q
    ||||||||||||||||||||| ||||||||| | |||  |||||||||||||||||  ||| |||||   |||||| |||||| ||||||||| ||||||    
T  24565259 tttgttattattatgtatttttattaaacaatttttt--tttttaatttaaaatctcaaccgttagatgtttttttgccacatgtcttacatctaaaccc 24565356  T
Q  104 taaat 108  Q
    |||||    
T  24565357 taaat 24565361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 22748699 - 22748592
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| || || | |||||| |||||| |||| |||||||| | |||||  ||||||| |||| |||||||||| || |    
T  22748699 ttgttttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttgcatccaaatcttaaatggagtaaatggagcatagcctaaattgagc 22748600  T
Q  139 gtacccga 146  Q
     |||||||    
T  22748599 atacccga 22748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 33277414 - 33277343
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagt 113  Q
    ||||||||||||||||||  ||||||| | | |||||| |||||| |||| |||||||||||||||| ||||    
T  33277414 ttttttaatttaaaatctcaaccattaaatatttttttgccacatgtcttgcatccaaaccctaaatgaagt 33277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34851461 - 34851504
Alignment:
Q  4 tttgttattattatgtattttcattaaacaaatatttgtttttt 47  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  34851461 tttgttattattatgtatttttattaaacacatatttgtttttt 34851504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 33277465 - 33277505
Alignment:
Q  9 tattattatgtattttcattaaacaaatatttgttttttaa 49  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  33277465 tattattatgtatcttaattaaacaaatatttgttttttaa 33277505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36955446 - 36955589
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||   ||| ||||| | |||||| |||||| |||| || |||||    
T  36955446 ttgtttgttattattatgtatttttattaatgagatatttgttttttaatttaaaatcgcaaccgttagatatttttttgccacatgtcttgcaaccaaa 36955545  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtaccc 144  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  36955546 ccctaaatagagtaaatagagcttagcctaaatggagcgtaccc 36955589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 31194114 - 31193969
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||  ||| || || | |||||| |||||| |||| ||||||||    
T  31194114 ttgtttgttattattatgtatttttattaaacaaatatttagtttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttgcatccaaa 31194015  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    || |||||  ||||||| |||||||||||||||||| | |||||||    
T  31194014 ccttaaatggagtaaatggagcttagcctaaatggagcatacccga 31193969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39634952 - 39634827
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| |  |||||| |||||| |||||||||||||    
T  39634952 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttag-attttttttgccacatgtcttacatccaaa 39634854  T
Q  101 ccctaaataaagtaaattgagcttagcc 128  Q
    |||| ||| |||||||| ||||||||||    
T  39634853 ccct-aatgaagtaaatggagcttagcc 39634827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 14076820 - 14076956
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaa-tatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  ||| ||| | | |||||| |||||| |||| |||||||    
T  14076820 ttgtttgttattattatgtatttttattaaaaaaaatatttgttttttaatttaaaatctcaaccgttaaatatttttttgccacatgtcttgcatccaa 14076919  T
Q  100 accctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||  ||||||| || |||||||||||||||    
T  14076920 accctaaatggagtaaatagaacttagcctaaatgga 14076956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42546498 - 42546391
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | |||||| ||| || |||| ||||||||    
T  42546498 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccaaatgtcttgcatccaaa 42546399  T
Q  101 ccctaaat 108  Q
    ||||||||    
T  42546398 ccctaaat 42546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32347046 - 32346988
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatct 59  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  32347046 ttgtttgttattattatatatttttattaaacaaatatttgttttttaatttaaaatct 32346988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 304163 - 304218
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaa 56  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  304163 ttgtttgttattattatgtatttttattaaataaatatttgttttttaatttaaaa 304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 17370178 - 17370071
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||||||||||  ||||||| ||| ||||| |||||||| |    
T  17370178 ttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaaccctaaatggagtaaatggagtttagcataaatggagc 17370079  T
Q  139 gtacccga 146  Q
     |||||||    
T  17370078 atacccga 17370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 31194155 - 31194262
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| || || | |||||| |||||| |||| |||||||||| |||||  ||||||| |||||||||||||||||| |    
T  31194155 ttgttttttaatttaaaatctcaaccgttggatatttttttgccacatgtcttgcatccaaaccttaaatggagtaaatggagcttagcctaaatggagc 31194254  T
Q  139 gtacccga 146  Q
     |||||||    
T  31194255 atacccga 31194262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17370219 - 17370267
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaa 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17370219 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaa 17370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 8754769 - 8754672
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||||||||||||| |  ||| |||||   |||||| |||||| |||| ||||||||||||||||| ||||||| ||| |||| |||||||||    
T  8754769 ttgttttttaatttaaaatttcaaccgttagatctttttttgccacatgtcttccatccaaaccctaaatagagtaaatggagtttagtctaaatgga 8754672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 39634993 - 39635086
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaat 133  Q
    |||||||||||||||||||||  ||| ||| | | |||||| || |||||||||||||||||||||||||  |||| ||  ||||||||||||||    
T  39634993 ttgttttttaatttaaaatctcaaccgttacatatttttttgccgcatatcttacatccaaaccctaaat-gagtatatgaagcttagcctaaat 39635086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 32347087 - 32347184
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||| ||||  ||  ||||| | ||||||  ||||| ||||||||||||||| |||||  ||||| | ||||||||||||||||||    
T  32347087 ttgttttttaatttaagatctaaacagttagatatttttttgtcacatgtcttacatccaaaccttaaatggagtaattggagcttagcctaaatgga 32347184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 36955371 - 36955307
Alignment:
Q  82 cacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||| |||| ||||||||||||||||  |||||||  ||||||||||||||||| | |||||||    
T  36955371 cacatgtcttgcatccaaaccctaaatggagtaaatgaagcttagcctaaatggagcctacccga 36955307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 42546539 - 42546617
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaat 117  Q
    |||||||||||||||||||||  ||| |||||   ||||||  ||||| |||| ||||||||||||||||  |||||||    
T  42546539 ttgttttttaatttaaaatctcaaccgttagatgtttttttgtcacatgtcttgcatccaaaccctaaatggagtaaat 42546617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 5465999 - 5465857
Alignment:
Q  4 tttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccc 103  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| ||||||||| ||||||    
T  5465999 tttgttattattatgtattattattaaataaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttacatctaaaccc 5465900  T
Q  104 taaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||| ||||||||  | ||||||||||||||| | |||||||    
T  5465899 taaatgaagtaaatgaaacttagcctaaatggagcatacccga 5465857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 46993221 - 46993365
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | | ||||| | |||||| | | ||||||| ||| ||||    
T  46993221 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaatcgttagatatttttttgctaaatatcttgcattcaaa 46993320  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccg 145  Q
     | |||||  ||||||||||||||||  |||||||| | ||||||    
T  46993321 tcttaaatggagtaaattgagcttagtttaaatggagcatacccg 46993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 24673874 - 24674008
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  | | ||||| | ||||||  || || |||||||||||||    
T  24673874 ttgtttgttattattatgtatttt-attaaataaatatttgttttttaatttaaaatctcaatcgttagatatttttttgtcatatgtcttacatccaaa 24673972  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    | ||||||| |||||||  || ||||||||||||||    
T  24673973 ctctaaatagagtaaatgaagtttagcctaaatgga 24674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 11790001 - 11789863
Alignment:
Q  8 ttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaa 107  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||| ||  | | |||||| ||||||||||| |||| ||||||||||    
T  11790001 ttattattatgtatttctattaaacaaatatttgttttttaatttaaaatctcaaccgttgaatatttttttgccacatatcttgcatctaaaccctaaa 11789902  T
Q  108 taaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    |  |||||||  ||||| ||||||||||| | |||||||    
T  11789901 tggagtaaatgaagctttgcctaaatggagcatacccga 11789863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9551373 - 9551257
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| | ||||||  ||||| |||| ||||||||    
T  9551373 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgacacatgtcttgcatccaaa 9551274  T
Q  101 ccctaaataaagtaaat 117  Q
     | ||||| ||| ||||    
T  9551273 tcttaaatgaagcaaat 9551257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26297465 - 26297572
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||  ||  ||||| | ||||||  |||||||||| ||||||||    
T  26297465 ttgtttgttattattatgtatttttattaaacgaatatttattttttaatttaaaatctcaactgttagatatttttttgtcacatatcttgcatccaaa 26297564  T
Q  101 ccctaaat 108  Q
    | ||||||    
T  26297565 ctctaaat 26297572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19037871 - 19037813
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatct 59  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19037871 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatct 19037813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1025055 - 1024956
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |  ||| ||||| | |||||| ||||||||||| ||||||||    
T  1025055 ttgtttgttattattatgtatttttattaaacaaatattaattttttaatttaaaatatcaaccgttagaca-ttttttgccacatatcttgcatccaaa 1024957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3556516 - 3556624
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgtttttt-aatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaa 99  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||  | |||||||||  ||| ||||| | |||||| |||||| |||| |||||||    
T  3556516 ttgtttgttattattatatatttttattaaacaaatatttgttttttctaattaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaa 3556615  T
Q  100 accctaaat 108  Q
    |||||||||    
T  3556616 accctaaat 3556624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 23655222 - 23655365
Alignment:
Q  4 tttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaact-tttttaccacatatcttacatccaaacc 102  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |  ||| |||||   | ||||| |||||| |||| |||| |||||    
T  23655222 tttgttattattatgtatttttattaaacaaatatttgatttttaatttaaaatttcaaccgttagattttctttttgccacatgtcttgcatctaaacc 23655321  T
Q  103 ctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||||  | |||||  |||||| |||||||||| | |||||||    
T  23655322 ctaaatggaataaatgaagcttaacctaaatggagcatacccga 23655365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 46993176 - 46993072
Alignment:
Q  41 gttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgt 140  Q
    |||||||||||||| ||||  ||| ||||| | |||||| | ||||||||| ||||||||||||||||| | ||||| ||||||| |||||||||| | |    
T  46993176 gttttttaatttaacatctcaaccgttagatatttttttgctacatatcttgcatccaaaccctaaatagaataaatggagcttaacctaaatggagcat 46993077  T
Q  141 acccg 145  Q
    |||||    
T  46993076 acccg 46993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 21785854 - 21785799
Alignment:
Q  2 tgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatct 59  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  21785854 tgtttgttattattatgtattt--attaaacaaatatttattttttaatttaaaatct 21785799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32591297 - 32591247
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatt 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  32591297 ttgtttgttattattatgtatttttattaaacaaatatttattttttaatt 32591247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 50544364 - 50544270
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||||||||||||   || ||||| |  ||||| |||||| |||| ||||||||||||||||| | ||||| ||||||||||||||||||    
T  50544364 ttttttaatttaaaatctcatccgttagatatctttttgccacatgtcttgcatccaaaccctaaatagaataaatggagcttagcctaaatgga 50544270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 11790052 - 11790136
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagct 123  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| |||||||||||||||| || ||||| |||||    
T  11790052 ttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaaccctaaatgaaataaatggagct 11790136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 17914906 - 17915035
Alignment:
Q  5 ttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccct 104  Q
    ||||| |||||||||||||  ||||||||||| |||  ||||||||||||||| |  ||| || || | |||||| |||||| |||| |||||||||  |    
T  17914906 ttgttgttattatgtatttctattaaacaaattttt--tttttaatttaaaatatcaaccgttggatatttttttgccacatgtcttgcatccaaacttt 17915003  T
Q  105 aaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||  ||||||| || |||||||||||||||    
T  17915004 aaatggagtaaatggaacttagcctaaatgga 17915035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53769537 - 53769593
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaat 57  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||    
T  53769537 ttgtttgttattattatgtatttttattaaataaatatttatttttttatttaaaat 53769593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 54316054 - 54316125
Alignment:
Q  74 ttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccg 145  Q
    |||||| |||||| |||| ||||||||||||||||  ||||||| |||||||||||||||||| | ||||||    
T  54316054 ttttttgccacatgtcttgcatccaaaccctaaatggagtaaatagagcttagcctaaatggagcatacccg 54316125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 1025096 - 1025190
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaat 133  Q
    |||||||||||||||||||||  ||| ||| | | ||||||| |||||||||| ||||||||| ||||||  |||||||  ||||||||| ||||    
T  1025096 ttgttttttaatttaaaatctcaaccgttatatatttttttatcacatatcttgcatccaaactctaaattgagtaaatgaagcttagccaaaat 1025190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 7062079 - 7061976
Alignment:
Q  43 tttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtac 142  Q
    ||||||||| |||||||  ||| ||| | | |||||| |||||| |||| |||||||||| |||||  ||||||| ||| |||||||||||||| | |||    
T  7062079 tttttaattaaaaatctcaaccgttatatatttttttgccacatgtcttgcatccaaaccataaatggagtaaatagaggttagcctaaatggagcatac 7061980  T
Q  143 ccga 146  Q
    ||||    
T  7061979 ccga 7061976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 42476007 - 42475890
Alignment:
Q  8 ttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaa 107  Q
    ||||||||||||||||| |||||||||||||           ||||||||||  | | ||||| | |||||| |||| | |||| |||||||||||||||    
T  42476007 ttattattatgtatttttattaaacaaatat-----------tttaaaatctcaatcgttagatatttttttgccacgtgtcttgcatccaaaccctaaa 42475919  T
Q  108 taaagtaaattgagcttagcctaaatgga 136  Q
    || |||||||  |||||||||||||||||    
T  42475918 tagagtaaatgaagcttagcctaaatgga 42475890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 50551478 - 50551539
Alignment:
Q  75 tttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||| |||||||||||||||||||||| |||||  |||||||  || ||||||||||||||    
T  50551478 tttttgccacatatcttacatccaaaccttaaatggagtaaataaagtttagcctaaatgga 50551539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 9551418 - 9551522
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgta 141  Q
    ||||||||||||||||||  ||| | ||| | |||||| ||| || |||| ||||||| ||||||||  ||||||| ||| |||| ||||||||| | ||    
T  9551418 ttttttaatttaaaatctcaaccgtgagatatttttttgccaaatgtcttccatccaagccctaaatggagtaaatggagtttagtctaaatggagcata 9551517  T
Q  142 cccga 146  Q
    |||||    
T  9551518 cccga 9551522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 32591338 - 32591417
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattaga-aacttttttaccacatatcttacatccaaaccctaaataaagtaaat 117  Q
    |||||||||||||||||||||  | ||||| | |  ||||||||||||| ||||||||||||| |||||||  |||||||    
T  32591338 ttgttttttaatttaaaatctcaatcattaaatattttttttaccacatgtcttacatccaaatcctaaattgagtaaat 32591417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 5466081 - 5466122
Alignment:
Q  81 ccacatatcttacatccaaaccctaaataaagtaaattgagc 122  Q
    |||||| |||||||||||||||||||||| ||||||| ||||    
T  5466081 ccacatgtcttacatccaaaccctaaatagagtaaatagagc 5466122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 17914824 - 17914755
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    |||||||||||||||||||||  ||  || || | |||||| |||||| |||| ||||||||||||||||    
T  17914824 ttgttttttaatttaaaatctcaactgttggatatttttttgccacatgtcttgcatccaaaccctaaat 17914755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6408406 - 6408521
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||    
T  6408406 ttgtttgttattattatgtatttttattagacaaatatttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaa 6408505  T
Q  101 ccctaaataaagtaaa 116  Q
    |||||||| |||||||    
T  6408506 ccctaaatgaagtaaa 6408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 35207332 - 35207462
Alignment:
Q  3 gtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaacc 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||   |  |||||| |||||| |||| ||||||||||    
T  35207332 gtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcgaccgtt---attttttttgccacatgtcttgcatccaaacc 35207428  T
Q  103 ctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||  ||||||| ||| ||||||||||||||    
T  35207429 ctaaatggagtaaatggagtttagcctaaatgga 35207462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19318299 - 19318445
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgtttt-ttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaa 99  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||  ||| ||||| | |||||| |||||| |||| |||| ||    
T  19318299 ttgtttgttattattatgtatgtttattaaacaaatatttgttttcttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatctaa 19318398  T
Q  100 accctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||| |||||  |||||||  ||||||||||||||||| | |||||||    
T  19318399 accttaaatggagtaaatgaagcttagcctaaatggagcatacccga 19318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26903577 - 26903447
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| || || |||||||| |||||| | ||| |  ||||    
T  26903577 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatttaaaatctcaaccgttcgatacttttttgccacatgt-ttaaa--caaa 26903481  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatg 134  Q
    |||||||| ||||||||  |||||||||||||||    
T  26903480 ccctaaatgaagtaaatgaagcttagcctaaatg 26903447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 48006276 - 48006397
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| ||| | | |||||| |||||| | || ||||||||    
T  48006276 ttgtttgttattattatgtattttcattaaacaaatatttattttttaatttaaaatctcaaccgttaaatatttttttgccacatgttttgcatccaaa 48006375  T
Q  101 ccctaaataaagtaaattgagc 122  Q
     |||||||| ||||||| ||||    
T  48006376 tcctaaatagagtaaatggagc 48006397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 35207289 - 35207182
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaac 138  Q
    |||||||||||||||||||||  ||| ||||| | |||||| |||||| |||| ||||||||||||||||  ||||||| |||||||||||||||||||     
T  35207289 ttgttttttaatttaaaatctcaaccgttagatatttttttgccacatgtcttgcatccaaaccctaaatggagtaaatggagcttagcctaaatggaat 35207190  T
Q  139 gtacccga 146  Q
     |||||||    
T  35207189 atacccga 35207182  T

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Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 35363467 - 35363322
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||  ||| ||| |   |||||| |||||| | || |||| |||    
T  35363467 ttgtttgttattattatgtatttttattaaacaaatacttattttttaatttaaaatctcaaccgttatatttttttttgccacatgtgttgcatctaaa 35363368  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    | ||||||  |||||||  | ||||||||||||||| | |||||||    
T  35363367 ctctaaatggagtaaatgaaacttagcctaaatggagcatacccga 35363322  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 2834353 - 2834486
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||  ||  ||| | | | |||| |||||| | ||  |||||||    
T  2834353 ttgtttgttattattatgtatttttattaaacaaatatt--ttttttaatttaaaatctcaactgttacatattattttgccacatgttttgtatccaaa 2834450  T
Q  101 ccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||  | ||||| || |||||||||||||||    
T  2834451 ccctaaatggaataaatggaacttagcctaaatgga 2834486  T

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Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 25048205 - 25048321
Alignment:
Q  31 acaaatatttgttttttaatttaaaatcttgaccattagaa-acttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcct 129  Q
    |||||||||| ||||||||||||||||||  ||| || ||| | ||||||  ||||| |||| |||||||| ||||||| |||||||| |||||||||||    
T  25048205 acaaatatttattttttaatttaaaatctcaaccgtttgaatatttttttgtcacatgtcttgcatccaaatcctaaatgaagtaaatggagcttagcct 25048304  T
Q  130 aaatggaacgtacccga 146  Q
    ||||||| | |||||||    
T  25048305 aaatggagcatacccga 25048321  T

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Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29474562 - 29474512
Alignment:
Q  1 ttgtttgttattattatgtattttcattaaacaaatatttgttttttaatt 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29474562 ttgtttgttattattatgtatttttattaaacaaatatttgttttttaatt 29474512  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 35363511 - 35363577
Alignment:
Q  42 ttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaat 108  Q
    ||||||||||||||||||  ||||||||| | |||||| ||||||||||||| |||||| |||||||    
T  35363511 ttttttaatttaaaatctcaaccattagatatttttttgccacatatcttacctccaaatcctaaat 35363577  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 19318258 - 19318161
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||||||  | | ||||| | ||||||  ||||| |||||||||||||| ||||||  ||||||| | ||||| ||||||||||    
T  19318258 ttgttttttaatttaaaatctcaatcgttagatatttttttgtcacatgtcttacatccaaactctaaatggagtaaatggcgcttaacctaaatgga 19318161  T

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Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 29474603 - 29474699
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    ||||||||||||||||||| |  ||| ||||| | |||||| | |||| |||| ||||||| | ||||||| ||||||| ||| ||||||||||||||    
T  29474603 ttgttttttaatttaaaatttcaaccgttagatattttttt-ctacatgtcttgcatccaagctctaaatagagtaaatggagtttagcctaaatgga 29474699  T

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Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 39983836 - 39983924
Alignment:
Q  43 tttttaatttaaaatcttgaccattagaaacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||||||||  ||| |||||| |||||    ||||| |||| ||||||||||||||||  ||||||| |||||| |||||||||||    
T  39983836 tttttaatttaaaatctcaaccgttagaa-ctttt----cacatgtcttgcatccaaaccctaaatggagtaaatggagcttcgcctaaatgga 39983924  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 6408365 - 6408267
Alignment:
Q  39 ttgttttttaatttaaaatcttgaccattaga-aacttttttaccacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatgga 136  Q
    |||||||||||| ||||||||  ||| ||| | |  |||||| ||||||||||  ||| |||| ||||||| |||||||| |||||||| |||||||||    
T  6408365 ttgttttttaatataaaatctcaaccgttacatattttttttgccacatatctgccattcaaatcctaaatgaagtaaatggagcttagactaaatgga 6408267  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 19318452 - 19318516
Alignment:
Q  82 cacatatcttacatccaaaccctaaataaagtaaattgagcttagcctaaatggaacgtacccga 146  Q
    ||||| |||| |||| ||||| |||||  ||||||| |||||||||||||||||| | |||||||    
T  19318452 cacatgtcttgcatctaaaccttaaatggagtaaatggagcttagcctaaatggagcatacccga 19318516  T

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