View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9470_high_7 (Length: 256)
Name: NF9470_high_7
Description: NF9470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9470_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 2949494 - 2949257
Alignment:
| Q |
1 |
ttgcatttaaggaccaccttaattaaattgggtgtcagggagtaaatgttgaacatggctgtgggtacaataaagaatgtgttggaaatgtggattagaa |
100 |
Q |
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| T |
2949494 |
ttgcatttaaggaccaccttaattaaattgggtgtcagggagtaaatgttgaacatggctgtgggtacaataaagaatgtgttggaaatgtggattagaa |
2949395 |
T |
|
| Q |
101 |
ttttctgttcaaggaaattgaaatgccatggcatttaagagattctgaaaaacaatagagttgtaaaaattaaataaattatggctctcagttgaaaaat |
200 |
Q |
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| T |
2949394 |
ttttctgttcaaggaaattgaaatgccatggcatttaagagattctgaaaaacaatagagttgtaaaaattaaataaattatggctctcagttgaaaaat |
2949295 |
T |
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| Q |
201 |
tcctctaagtttttgagtgagaaaactagtactactaa |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2949294 |
tcctctaagtttttgagtgagaaaactagtactactaa |
2949257 |
T |
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