View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9470_low_10 (Length: 318)

Name: NF9470_low_10
Description: NF9470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9470_low_10
NF9470_low_10
[»] chr2 (41 HSPs)
chr2 (1-296)||(14179686-14179981)
chr2 (1-296)||(14183424-14183719)
chr2 (52-204)||(23968632-23968784)
chr2 (1-206)||(24717908-24718113)
chr2 (138-263)||(149601-149726)
chr2 (39-255)||(28652548-28652763)
chr2 (162-255)||(1383771-1383864)
chr2 (138-258)||(12626527-12626647)
chr2 (39-259)||(19647070-19647289)
chr2 (195-263)||(21072839-21072907)
chr2 (195-263)||(41301080-41301148)
chr2 (39-263)||(45535758-45535981)
chr2 (154-237)||(23801351-23801434)
chr2 (1-68)||(24436675-24436742)
chr2 (208-265)||(18358132-18358189)
chr2 (207-263)||(23338562-23338618)
chr2 (1-73)||(24780798-24780870)
chr2 (39-263)||(20005967-20006192)
chr2 (201-255)||(36734610-36734664)
chr2 (220-265)||(25184019-25184064)
chr2 (52-133)||(25584272-25584352)
chr2 (1-73)||(2523705-2523777)
chr2 (195-263)||(20590433-20590501)
chr2 (195-255)||(43707198-43707258)
chr2 (212-259)||(28345205-28345252)
chr2 (1-59)||(21369329-21369387)
chr2 (195-265)||(31345951-31346021)
chr2 (208-265)||(21081134-21081191)
chr2 (208-265)||(21915454-21915511)
chr2 (16-73)||(22501993-22502050)
chr2 (16-73)||(22509927-22509984)
chr2 (1-73)||(5031087-5031159)
chr2 (207-263)||(10684095-10684151)
chr2 (207-263)||(13100897-13100953)
chr2 (207-263)||(20261993-20262049)
chr2 (3-67)||(20916335-20916399)
chr2 (3-73)||(9975951-9976021)
chr2 (1-55)||(22251406-22251460)
chr2 (1-55)||(36841267-36841321)
chr2 (195-256)||(7187266-7187327)
chr2 (195-256)||(22173128-22173189)
[»] chr8 (41 HSPs)
chr8 (4-296)||(12037125-12037417)
chr8 (1-208)||(21579164-21579371)
chr8 (1-208)||(29762826-29763033)
chr8 (39-208)||(22474643-22474812)
chr8 (31-208)||(17978404-17978581)
chr8 (42-204)||(41680132-41680294)
chr8 (4-208)||(22208155-22208360)
chr8 (1-190)||(22258264-22258454)
chr8 (39-168)||(36405128-36405257)
chr8 (138-255)||(22483620-22483737)
chr8 (195-263)||(8413899-8413967)
chr8 (195-263)||(19882781-19882849)
chr8 (201-265)||(25657672-25657736)
chr8 (208-265)||(16198666-16198723)
chr8 (89-133)||(22966772-22966816)
chr8 (4-257)||(20879311-20879565)
chr8 (208-263)||(36732649-36732704)
chr8 (208-265)||(23478912-23478969)
chr8 (195-256)||(25483592-25483653)
chr8 (1-73)||(18761470-18761542)
chr8 (1-61)||(19140798-19140858)
chr8 (1-61)||(36306031-36306091)
chr8 (195-265)||(14397061-14397130)
chr8 (195-253)||(23661140-23661198)
chr8 (195-252)||(20455831-20455888)
chr8 (195-252)||(20460809-20460866)
chr8 (92-133)||(21697509-21697550)
chr8 (164-233)||(26220415-26220484)
chr8 (164-232)||(26222469-26222537)
chr8 (1-73)||(42817865-42817937)
chr8 (208-255)||(19880663-19880710)
chr8 (208-255)||(26454546-26454593)
chr8 (221-263)||(11775556-11775598)
chr8 (195-253)||(17460358-17460416)
chr8 (195-249)||(20463042-20463096)
chr8 (195-252)||(20455095-20455152)
chr8 (39-76)||(20517032-20517069)
chr8 (4-61)||(22345198-22345257)
chr8 (4-61)||(22356858-22356917)
chr8 (33-73)||(22708314-22708354)
chr8 (1-57)||(23943784-23943840)
[»] chr4 (47 HSPs)
chr4 (1-208)||(40230193-40230400)
chr4 (16-208)||(33243267-33243459)
chr4 (39-208)||(19565914-19566083)
chr4 (31-208)||(46741086-46741263)
chr4 (1-208)||(44023565-44023768)
chr4 (39-204)||(12623207-12623372)
chr4 (1-208)||(12424248-12424458)
chr4 (90-208)||(33186789-33186907)
chr4 (138-263)||(16296703-16296828)
chr4 (138-263)||(35660720-35660845)
chr4 (1-263)||(9638841-9639104)
chr4 (162-263)||(14549482-14549583)
chr4 (39-263)||(18462855-18463079)
chr4 (162-259)||(19434778-19434875)
chr4 (1-117)||(25513828-25513945)
chr4 (169-265)||(10694371-10694467)
chr4 (1-73)||(25091675-25091747)
chr4 (195-263)||(28386077-28386145)
chr4 (39-263)||(14477464-14477687)
chr4 (195-263)||(16277438-16277506)
chr4 (1-73)||(19022366-19022438)
chr4 (195-263)||(53387048-53387116)
chr4 (1-73)||(53630432-53630504)
chr4 (195-265)||(18230572-18230642)
chr4 (208-265)||(15008798-15008855)
chr4 (195-256)||(15344775-15344836)
chr4 (195-256)||(51463179-51463240)
chr4 (89-133)||(20150787-20150831)
chr4 (30-117)||(26921496-26921584)
chr4 (207-263)||(33849576-33849632)
chr4 (207-263)||(36038644-36038700)
chr4 (207-263)||(49547106-49547162)
chr4 (39-133)||(13165095-13165188)
chr4 (195-253)||(23802555-23802613)
chr4 (1-63)||(42875829-42875891)
chr4 (208-265)||(10908176-10908233)
chr4 (195-256)||(12611751-12611812)
chr4 (164-233)||(14281113-14281182)
chr4 (1-73)||(10356394-10356466)
chr4 (207-263)||(15534955-15535011)
chr4 (31-94)||(26014285-26014348)
chr4 (222-265)||(40620362-40620405)
chr4 (195-253)||(15447528-15447586)
chr4 (164-233)||(54798024-54798093)
chr4 (2-62)||(10694204-10694264)
chr4 (2-62)||(10907970-10908030)
chr4 (1-73)||(19610346-19610418)
[»] chr3 (60 HSPs)
chr3 (16-208)||(53646032-53646224)
chr3 (52-208)||(54330316-54330472)
chr3 (1-208)||(14152357-14152565)
chr3 (90-208)||(5215533-5215651)
chr3 (1-263)||(50350774-50351037)
chr3 (138-263)||(45803432-45803557)
chr3 (32-263)||(29907468-29907702)
chr3 (32-263)||(29948634-29948868)
chr3 (32-263)||(29997788-29998022)
chr3 (146-245)||(12917416-12917515)
chr3 (39-257)||(48631170-48631387)
chr3 (170-263)||(14641676-14641769)
chr3 (162-255)||(6805046-6805139)
chr3 (195-263)||(18890257-18890325)
chr3 (195-263)||(43549806-43549874)
chr3 (121-208)||(15566399-15566486)
chr3 (39-133)||(21845648-21845741)
chr3 (195-265)||(55291752-55291822)
chr3 (195-263)||(42361-42429)
chr3 (1-73)||(17541456-17541528)
chr3 (195-265)||(5224154-5224224)
chr3 (195-265)||(26054585-26054655)
chr3 (195-265)||(46722737-46722807)
chr3 (208-265)||(22652603-22652660)
chr3 (207-263)||(13437072-13437128)
chr3 (195-263)||(18893516-18893584)
chr3 (1-73)||(22306541-22306613)
chr3 (195-265)||(15465926-15465996)
chr3 (90-132)||(15566706-15566748)
chr3 (195-256)||(6820010-6820071)
chr3 (208-265)||(16979742-16979799)
chr3 (207-263)||(3803647-3803703)
chr3 (195-255)||(10555148-10555208)
chr3 (207-263)||(12305896-12305952)
chr3 (195-263)||(16324691-16324759)
chr3 (1-73)||(17047148-17047220)
chr3 (207-263)||(43929224-43929280)
chr3 (39-122)||(3160623-3160706)
chr3 (13-68)||(41172341-41172396)
chr3 (207-260)||(29544196-29544249)
chr3 (1-73)||(17044988-17045060)
chr3 (207-263)||(48043642-48043698)
chr3 (207-263)||(54521596-54521652)
chr3 (169-256)||(13522474-13522561)
chr3 (31-73)||(11563747-11563789)
chr3 (195-253)||(16643926-16643984)
chr3 (195-253)||(24152535-24152593)
chr3 (195-253)||(50243656-50243714)
chr3 (164-233)||(10551167-10551236)
chr3 (4-73)||(11259453-11259522)
chr3 (163-208)||(14508733-14508778)
chr3 (4-73)||(17694089-17694158)
chr3 (164-233)||(21619245-21619314)
chr3 (164-233)||(36167394-36167463)
chr3 (215-263)||(3527328-3527376)
chr3 (33-73)||(6003207-6003247)
chr3 (195-255)||(10833456-10833516)
chr3 (48-76)||(12155030-12155058)
chr3 (1-73)||(15931466-15931538)
chr3 (1-73)||(35354624-35354696)
[»] chr7 (62 HSPs)
chr7 (1-208)||(14160814-14161021)
chr7 (1-208)||(15119265-15119472)
chr7 (39-208)||(14317959-14318128)
chr7 (57-208)||(9743093-9743244)
chr7 (1-208)||(43276702-43276909)
chr7 (92-208)||(8513803-8513920)
chr7 (138-265)||(13315176-13315303)
chr7 (146-261)||(19282880-19282995)
chr7 (154-263)||(38295434-38295543)
chr7 (162-263)||(12754784-12754885)
chr7 (162-263)||(47975010-47975111)
chr7 (195-263)||(4325929-4325997)
chr7 (195-265)||(14105578-14105648)
chr7 (195-265)||(14415595-14415665)
chr7 (174-263)||(17070421-17070510)
chr7 (195-263)||(44190367-44190435)
chr7 (197-255)||(708675-708733)
chr7 (195-265)||(1856551-1856621)
chr7 (1-73)||(12465218-12465290)
chr7 (195-263)||(14188444-14188512)
chr7 (39-263)||(42565829-42566052)
chr7 (195-265)||(13256524-13256594)
chr7 (195-265)||(13917723-13917793)
chr7 (209-263)||(19195024-19195078)
chr7 (208-265)||(16550167-16550224)
chr7 (208-265)||(16615438-16615495)
chr7 (1-73)||(8851117-8851189)
chr7 (195-263)||(11661939-11662007)
chr7 (1-73)||(12372296-12372368)
chr7 (1-73)||(13147430-13147502)
chr7 (195-259)||(13648119-13648183)
chr7 (207-263)||(16108021-16108077)
chr7 (195-255)||(16462910-16462970)
chr7 (195-263)||(17505115-17505183)
chr7 (195-263)||(17548031-17548099)
chr7 (207-263)||(23664285-23664341)
chr7 (169-261)||(32160326-32160418)
chr7 (1-73)||(32433547-32433619)
chr7 (195-263)||(39431338-39431406)
chr7 (201-256)||(14274062-14274117)
chr7 (195-265)||(25926450-25926520)
chr7 (201-255)||(25942312-25942366)
chr7 (209-263)||(37539280-37539334)
chr7 (164-230)||(48274349-48274415)
chr7 (92-145)||(8488144-8488197)
chr7 (4-73)||(12127124-12127193)
chr7 (4-78)||(37539465-37539541)
chr7 (1-61)||(58371-58431)
chr7 (1-73)||(11067490-11067562)
chr7 (207-263)||(11304021-11304077)
chr7 (1-73)||(12322888-12322960)
chr7 (1-73)||(16999458-16999530)
chr7 (207-263)||(29797384-29797440)
chr7 (207-263)||(29801203-29801259)
chr7 (39-263)||(33060271-33060494)
chr7 (15-78)||(19195628-19195691)
chr7 (208-255)||(29052347-29052394)
chr7 (164-233)||(10063021-10063090)
chr7 (195-256)||(13864513-13864574)
chr7 (4-61)||(13744469-13744528)
chr7 (33-73)||(21661278-21661318)
chr7 (4-61)||(38299782-38299841)
[»] chr6 (44 HSPs)
chr6 (4-255)||(25921841-25922092)
chr6 (16-208)||(23431420-23431612)
chr6 (1-208)||(31734594-31734801)
chr6 (30-208)||(18455060-18455238)
chr6 (31-208)||(22557135-22557311)
chr6 (31-208)||(7217232-7217408)
chr6 (39-208)||(32259732-32259901)
chr6 (90-197)||(23657986-23658093)
chr6 (138-265)||(29045094-29045221)
chr6 (4-133)||(1818915-1819045)
chr6 (195-263)||(13765180-13765248)
chr6 (195-263)||(23956696-23956764)
chr6 (195-263)||(31021872-31021940)
chr6 (195-265)||(23415736-23415806)
chr6 (195-260)||(27557499-27557564)
chr6 (1-73)||(7827994-7828066)
chr6 (1-73)||(23150245-23150317)
chr6 (195-253)||(23226008-23226066)
chr6 (39-255)||(25601326-25601538)
chr6 (4-78)||(13285765-13285841)
chr6 (208-265)||(15891734-15891791)
chr6 (208-265)||(15900819-15900876)
chr6 (1-61)||(17318124-17318184)
chr6 (170-254)||(19825614-19825698)
chr6 (207-263)||(28288669-28288725)
chr6 (195-253)||(25619048-25619106)
chr6 (164-233)||(16447892-16447961)
chr6 (195-256)||(20556183-20556244)
chr6 (164-233)||(21119944-21120013)
chr6 (207-263)||(12942963-12943019)
chr6 (1-73)||(19655189-19655261)
chr6 (1-73)||(27125435-27125507)
chr6 (4-117)||(34140415-34140529)
chr6 (4-61)||(34153031-34153090)
chr6 (222-261)||(15173632-15173671)
chr6 (1-56)||(20410470-20410525)
chr6 (3-73)||(18703590-18703660)
chr6 (3-73)||(18709525-18709595)
chr6 (209-263)||(35057376-35057430)
chr6 (207-256)||(611640-611689)
chr6 (164-233)||(19102600-19102669)
chr6 (90-259)||(24506163-24506331)
chr6 (209-261)||(13285582-13285634)
chr6 (39-99)||(18459302-18459362)
[»] scaffold0371 (2 HSPs)
scaffold0371 (1-208)||(10404-10611)
scaffold0371 (1-105)||(3864-3968)
[»] chr5 (29 HSPs)
chr5 (1-208)||(26762289-26762496)
chr5 (31-208)||(14025795-14025972)
chr5 (4-208)||(8503849-8504053)
chr5 (31-208)||(8833194-8833371)
chr5 (31-208)||(26749919-26750095)
chr5 (35-148)||(1626910-1627023)
chr5 (4-263)||(21503971-21504232)
chr5 (162-259)||(36508862-36508959)
chr5 (195-263)||(33472714-33472782)
chr5 (195-263)||(27868725-27868793)
chr5 (208-265)||(17011558-17011615)
chr5 (1-133)||(23199165-23199297)
chr5 (195-263)||(18419285-18419353)
chr5 (89-133)||(24068191-24068235)
chr5 (201-263)||(21398956-21399018)
chr5 (201-263)||(24594220-24594282)
chr5 (201-263)||(24668314-24668376)
chr5 (201-263)||(24738083-24738145)
chr5 (201-263)||(24750852-24750914)
chr5 (208-261)||(265872-265925)
chr5 (16-73)||(21300017-21300074)
chr5 (1-58)||(21398602-21398659)
chr5 (164-233)||(18318322-18318391)
chr5 (164-233)||(20765367-20765436)
chr5 (208-265)||(29448670-29448727)
chr5 (207-263)||(9776939-9776995)
chr5 (207-263)||(37804235-37804291)
chr5 (207-263)||(41875755-41875811)
chr5 (207-256)||(30138247-30138296)
[»] chr1 (38 HSPs)
chr1 (31-208)||(44892336-44892513)
chr1 (1-208)||(41225412-41225619)
chr1 (1-208)||(41226665-41226872)
chr1 (31-208)||(14792551-14792728)
chr1 (32-296)||(21243746-21243991)
chr1 (31-208)||(18121490-18121667)
chr1 (30-208)||(38887074-38887252)
chr1 (146-265)||(17901905-17902024)
chr1 (146-265)||(21239146-21239265)
chr1 (138-263)||(8306436-8306561)
chr1 (138-265)||(6833996-6834126)
chr1 (162-263)||(7052132-7052233)
chr1 (162-263)||(24723579-24723680)
chr1 (39-263)||(21188030-21188253)
chr1 (90-263)||(38056720-38056893)
chr1 (40-133)||(39061283-39061375)
chr1 (146-245)||(35894949-35895048)
chr1 (90-254)||(8276037-8276201)
chr1 (195-263)||(22130176-22130244)
chr1 (195-263)||(28313182-28313250)
chr1 (169-265)||(46197871-46197967)
chr1 (207-263)||(297189-297245)
chr1 (1-73)||(19676733-19676805)
chr1 (138-265)||(22145763-22145891)
chr1 (89-133)||(40390112-40390156)
chr1 (195-255)||(45574170-45574230)
chr1 (1-63)||(20633589-20633651)
chr1 (201-263)||(23194669-23194731)
chr1 (100-153)||(11808235-11808288)
chr1 (1-117)||(28476692-28476809)
chr1 (1-73)||(21046007-21046079)
chr1 (195-253)||(13880687-13880745)
chr1 (208-265)||(50001306-50001363)
chr1 (220-263)||(29763809-29763852)
chr1 (3-61)||(12710901-12710959)
chr1 (16-62)||(16058287-16058333)
chr1 (1-58)||(20588675-20588732)
chr1 (1-58)||(20593213-20593270)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-195)||(174121-174315)
[»] scaffold0439 (2 HSPs)
scaffold0439 (31-206)||(4310-4485)
scaffold0439 (201-256)||(12080-12135)
[»] scaffold0401 (1 HSPs)
scaffold0401 (31-207)||(8709-8885)
[»] scaffold0385 (1 HSPs)
scaffold0385 (31-208)||(232-409)
[»] scaffold0063 (1 HSPs)
scaffold0063 (39-208)||(62605-62774)
[»] scaffold0630 (1 HSPs)
scaffold0630 (39-208)||(8950-9119)
[»] scaffold0039 (1 HSPs)
scaffold0039 (31-208)||(9916-10093)
[»] scaffold0011 (1 HSPs)
scaffold0011 (39-208)||(33341-33510)
[»] scaffold0048 (1 HSPs)
scaffold0048 (31-208)||(56863-57037)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-208)||(5517-5727)
[»] scaffold0594 (1 HSPs)
scaffold0594 (146-260)||(2075-2189)
[»] scaffold0121 (1 HSPs)
scaffold0121 (98-202)||(20092-20196)
[»] scaffold1160 (1 HSPs)
scaffold1160 (98-208)||(571-681)
[»] scaffold0108 (1 HSPs)
scaffold0108 (90-208)||(6303-6422)
[»] scaffold0004 (1 HSPs)
scaffold0004 (146-265)||(66183-66300)
[»] scaffold0148 (1 HSPs)
scaffold0148 (138-263)||(8673-8798)
[»] scaffold0676 (2 HSPs)
scaffold0676 (138-260)||(2649-2771)
scaffold0676 (16-117)||(2858-2960)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-263)||(28384-28645)
scaffold0125 (195-253)||(1201-1259)
[»] scaffold1437 (1 HSPs)
scaffold1437 (92-208)||(343-459)
[»] scaffold0730 (1 HSPs)
scaffold0730 (138-263)||(6599-6724)
[»] scaffold0092 (1 HSPs)
scaffold0092 (39-263)||(38438-38662)
[»] scaffold0026 (1 HSPs)
scaffold0026 (162-263)||(21954-22055)
[»] scaffold0021 (3 HSPs)
scaffold0021 (127-207)||(169328-169408)
scaffold0021 (37-262)||(16940-17163)
scaffold0021 (37-262)||(26471-26694)
[»] scaffold0328 (1 HSPs)
scaffold0328 (16-263)||(18613-18862)
[»] scaffold0149 (1 HSPs)
scaffold0149 (162-263)||(21372-21473)
[»] scaffold0337 (1 HSPs)
scaffold0337 (39-259)||(3041-3260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (39-263)||(28546-28769)
[»] scaffold1276 (1 HSPs)
scaffold1276 (207-271)||(965-1029)
[»] scaffold0151 (1 HSPs)
scaffold0151 (195-263)||(9928-9996)
[»] scaffold0058 (2 HSPs)
scaffold0058 (195-263)||(39963-40031)
scaffold0058 (39-122)||(59652-59735)
[»] scaffold0046 (1 HSPs)
scaffold0046 (201-265)||(21935-21999)
[»] scaffold0200 (1 HSPs)
scaffold0200 (195-265)||(18425-18495)
[»] scaffold0017 (1 HSPs)
scaffold0017 (39-133)||(23576-23669)
[»] scaffold0220 (1 HSPs)
scaffold0220 (170-263)||(13780-13873)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-133)||(19169-19301)
[»] scaffold0138 (1 HSPs)
scaffold0138 (208-265)||(20927-20984)
[»] scaffold0106 (1 HSPs)
scaffold0106 (195-264)||(21816-21885)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-62)||(21751-21812)
[»] scaffold0034 (1 HSPs)
scaffold0034 (208-265)||(29381-29438)
[»] scaffold1283 (1 HSPs)
scaffold1283 (1-73)||(426-498)
[»] scaffold0422 (1 HSPs)
scaffold0422 (207-263)||(3797-3853)
[»] scaffold0334 (1 HSPs)
scaffold0334 (195-263)||(1958-2026)
[»] scaffold0145 (1 HSPs)
scaffold0145 (89-133)||(8086-8130)
[»] scaffold0120 (1 HSPs)
scaffold0120 (89-133)||(29273-29317)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-73)||(79071-79143)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-73)||(78143-78215)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-73)||(24089-24161)
[»] scaffold0007 (2 HSPs)
scaffold0007 (90-230)||(16467-16609)
scaffold0007 (162-256)||(18979-19073)
[»] scaffold0001 (5 HSPs)
scaffold0001 (1-73)||(77709-77781)
scaffold0001 (195-263)||(169273-169341)
scaffold0001 (195-263)||(176626-176694)
scaffold0001 (1-73)||(32016-32088)
scaffold0001 (1-73)||(37323-37395)
[»] scaffold0364 (1 HSPs)
scaffold0364 (196-255)||(8005-8064)
[»] scaffold0061 (2 HSPs)
scaffold0061 (208-263)||(14751-14806)
scaffold0061 (208-263)||(23809-23864)
[»] scaffold1102 (1 HSPs)
scaffold1102 (39-121)||(1947-2029)
[»] scaffold0956 (2 HSPs)
scaffold0956 (195-261)||(2246-2312)
scaffold0956 (1-73)||(2577-2649)
[»] scaffold0165 (1 HSPs)
scaffold0165 (37-135)||(31890-31987)
[»] scaffold0086 (1 HSPs)
scaffold0086 (209-263)||(35652-35706)
[»] scaffold0083 (1 HSPs)
scaffold0083 (208-265)||(1767-1824)
[»] scaffold0051 (1 HSPs)
scaffold0051 (208-265)||(31975-32031)
[»] scaffold1939 (1 HSPs)
scaffold1939 (41-184)||(38-181)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-73)||(4672-4744)
[»] scaffold0453 (1 HSPs)
scaffold0453 (207-263)||(7173-7229)
[»] scaffold0113 (1 HSPs)
scaffold0113 (201-265)||(35322-35386)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-73)||(34361-34433)
[»] scaffold0070 (1 HSPs)
scaffold0070 (195-255)||(8932-8992)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-73)||(58768-58840)
[»] scaffold0057 (2 HSPs)
scaffold0057 (169-265)||(69979-70075)
scaffold0057 (195-256)||(72277-72338)
[»] scaffold0016 (1 HSPs)
scaffold0016 (195-263)||(174259-174327)
[»] scaffold0261 (1 HSPs)
scaffold0261 (31-117)||(6408-6494)
[»] scaffold0256 (1 HSPs)
scaffold0256 (173-244)||(1971-2042)
[»] scaffold0394 (2 HSPs)
scaffold0394 (39-133)||(7510-7603)
scaffold0394 (195-256)||(12890-12951)
[»] scaffold0205 (1 HSPs)
scaffold0205 (201-263)||(5774-5836)
[»] scaffold0040 (1 HSPs)
scaffold0040 (162-256)||(106280-106374)
[»] scaffold0035 (2 HSPs)
scaffold0035 (201-263)||(43945-44007)
scaffold0035 (207-263)||(39259-39315)
[»] scaffold1439 (1 HSPs)
scaffold1439 (195-256)||(916-977)
[»] scaffold0436 (1 HSPs)
scaffold0436 (208-265)||(8790-8847)
[»] scaffold0022 (1 HSPs)
scaffold0022 (164-233)||(117293-117362)
[»] scaffold1800 (1 HSPs)
scaffold1800 (39-256)||(445-663)
[»] scaffold1633 (1 HSPs)
scaffold1633 (1-73)||(1227-1299)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-65)||(11919-11983)
[»] scaffold0379 (1 HSPs)
scaffold0379 (1-61)||(10981-11041)
[»] scaffold0139 (1 HSPs)
scaffold0139 (39-133)||(40157-40253)
[»] scaffold0059 (1 HSPs)
scaffold0059 (39-78)||(49746-49785)
[»] scaffold0877 (1 HSPs)
scaffold0877 (207-253)||(2190-2236)
[»] scaffold0462 (3 HSPs)
scaffold0462 (209-263)||(1102-1156)
scaffold0462 (209-263)||(6608-6662)
scaffold0462 (208-265)||(11053-11110)
[»] scaffold0293 (1 HSPs)
scaffold0293 (195-257)||(19450-19512)
[»] scaffold0290 (1 HSPs)
scaffold0290 (207-253)||(916-962)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-63)||(13510-13572)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-67)||(1966-2032)
[»] scaffold0819 (1 HSPs)
scaffold0819 (136-173)||(5289-5326)
[»] scaffold0203 (1 HSPs)
scaffold0203 (16-73)||(17913-17970)
[»] scaffold1434 (1 HSPs)
scaffold1434 (33-73)||(1349-1389)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-41)||(23850-23890)
[»] scaffold0117 (1 HSPs)
scaffold0117 (195-259)||(42509-42573)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-61)||(127302-127361)


Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 14179686 - 14179981
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  14179686 tgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaatcatgagtatgtaatcctgaaaaaaggt 14179785  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||| |||| || |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  14179786 ttatccttatacttgttaatagattttgatgttgtggaattagggtttgaaactaaaattgattgtagaaagagtagataatctgatgaactaggttaat 14179885  T
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttggagaaattaagggtttttgctggaatctgtg 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  14179886 aattggtgttcaggttgtggaataatcataggtagtgtttcctatcaaatttgagatttggattggagaaattaagggtttttgctgaaatctgtg 14179981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 14183424 - 14183719
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||| ||||||||||| || | |  ||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||| |    
T  14183424 tgtgagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaatcatgagtatgtaatcctgaaaaaagat 14183523  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  14183524 ttatccttatacttgttaataggttttgatgttgtggaattagggtttgaaactaaaattgattgtagaaagggtagataatccgatgaactagtttaat 14183623  T
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttggagaaattaagggtttttgctggaatctgtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  14183624 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggttggagaatttaagggtttttgctggcatctgtg 14183719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 23968632 - 23968784
Alignment:
Q  52 ggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaa 151  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  23968632 ggtgagactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaaccttgtagtcgttaataggttttgatgttgtagaattagggtttgaa 23968731  T
Q  152 actaaaattaattgtagaaagagtagataatccgatgaactaggttaataatt 204  Q
    ||||||||| || |||||||||||||||||||||||||| || ||| ||||||    
T  23968732 actaaaattgatcgtagaaagagtagataatccgatgaattaagttgataatt 23968784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24718113 - 24717908
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||| ||||   |||  ||   ||| |||||||||||| |||||||||||| | ||||||||| ||||||  |||    
T  24718113 tgtgagaagaggagcaatcttgtagagttcgatcgattaacatatagtaagggtgggactaacattctttaatcataagtatgtaatcctgaaaaggggt 24718014  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||| |||| |||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  24718013 ttaaccttgtatttgtcaataggttttgatgttgcagaattcgggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgat 24717914  T
Q  201 aattgg 206  Q
    ||||||    
T  24717913 aattgg 24717908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 149601 - 149726
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| || | ||||||||||||||||| |||| ||||||||||||||  ||    
T  149601 aattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaag 149700  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||||||||||||||||||||||||||    
T  149701 tttcctatcaaatttgggatttgggt 149726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 255
Target Start/End: Original strand, 28652548 - 28652763
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaacctt-gtagttgttaataggttttgatgttgtgg 137  Q
    |||||||| ||| |||||||||||||||| |||||||| | ||||||||  ||||||| |||||| |||| |||||||||  ||| |||||||||| | |    
T  28652548 aatctaaggtaagggtgggactaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgttag-ttttgatgttatag 28652646  T
Q  138 aa-ttagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    || |||||||| ||   | || ||||||||  ||||||||| |||||| ||||| || | ||||||||| ||||||||| || ||||||||||||| |||    
T  28652647 aaattagggttagat--tgaatttaattgttaaaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaaga 28652744  T
Q  237 gtttcctatcaaatttggg 255  Q
    |||| |||| |||||||||    
T  28652745 gttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 1383771 - 1383864
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| |||||||||| |||||||||||| ||   ||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  1383771 attgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 1383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 12626527 - 12626647
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||||||||||| ||    || ||||| |||||||||||| |||||| |||| || |||    
T  12626527 aattaggttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacataagttgag 12626626  T
Q  238 tttcctatcaaatttgggatt 258  Q
    ||||||||  |||||||||||    
T  12626627 tttcctattgaatttgggatt 12626647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 259
Target Start/End: Complemental strand, 19647289 - 19647070
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||  |||| |||||||||||||||||||| | ||| ||||  ||||||| ||||||| |||||||||||||||| ||||||||  | | ||    
T  19647289 aatctaaggtatgggtgagactaaccttctttaatcataagtatataattctgaaaaagggtttaatcttgtagttgttaata-gttttgattgtataga 19647191  T
Q  139 a-ttagggtttgaaact-aaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    | ||||||||  ||| |  ||||| ||||| ||||  |||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  |||||||      
T  19647190 agttagggtt--aaattgcaaattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaat 19647093  T
Q  237 gtttcctatcaaatttgggattt 259  Q
    |||||||||||||||||||||||    
T  19647092 gtttcctatcaaatttgggattt 19647070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 21072839 - 21072907
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  21072839 gttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggt 21072907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 41301080 - 41301148
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||    
T  41301080 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggt 41301148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 45535981 - 45535758
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||||||||||||||||||||||| || | | ||||  ||||||| ||||||| ||||| |||||| |||  || || |||| | ||    
T  45535981 aatctaaggtaagggtgggactaaccttctttaatcacgagtctataattctgaaaaagggtttaatcttgttgttgttgataa-ttctgttgttataga 45535883  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  ||||| ||    || || ||||| ||||| |||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  |||||||  ||    
T  45535882 agttaggtttaaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgt 45535783  T
Q  239 ttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||||||||||||||||    
T  45535782 ttcctgtcaaatttgggatttgggt 45535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 23801434 - 23801351
Alignment:
Q  154 taaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||| |||||||||| ||| |||||||| || | |||||| ||||||||||||||| ||||||| ||||||||||    
T  23801434 taaaattgattgttgaaagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataataggtagag 23801351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24436742 - 24436675
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttct 68  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||||||| |||||||||||| ||||    
T  24436742 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttct 24436675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 18358132 - 18358189
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  18358132 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 18358189  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 23338562 - 23338618
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  23338562 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 23338618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24780798 - 24780870
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  24780798 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 24780870  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 263
Target Start/End: Original strand, 20005967 - 20006192
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||||||||| |||||||||||||||| | | ||||  ||||||| |||||||  |||| ||||||||||  |||||||||| | ||    
T  20005967 aatctaaggtaagggtgggactagccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata-attttgatgttataga 20006065  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtt--aataattggtgttcaggttgtggaataatcataggtaga 236  Q
    | |  ||||||||    || || ||||| ||||| |||| |||||  ||||| ||   |  || || || |||||| ||||| ||||||  |||||||      
T  20006066 agttaggtttgaattgcaatttgattgttgaaagtgtaggtaatcgaatgaattaatataaaaaaaatgatgttcatgttgtagaataacaataggtaat 20006165  T
Q  237 gtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||||||||||||||||    
T  20006166 gtttcctatcaaatttgggatttgggt 20006192  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 36734610 - 36734664
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    |||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 36734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 25184064 - 25184019
Alignment:
Q  220 gaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  25184064 gaataaacataggttgagtttcctatcaaatttgggatttgggttg 25184019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 25584272 - 25584352
Alignment:
Q  52 ggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    ||||||| ||||||||||||||||||| ||| ||||  ||||||| ||||||||||||| |||| | ||| |||||||||||    
T  25584272 ggtgggaataaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgata-gttttgatgtt 25584352  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2523705 - 2523777
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |||||||||||| |||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  2523705 tgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 2523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 20590433 - 20590501
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| ||||||||| || ||||||||||||||  ||||| |||||||||||||| |||||||    
T  20590433 gttaagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatttggggtttgggt 20590501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 43707198 - 43707258
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| |||||| ||||| ||||||||||||||  ||||||||||||||||||||    
T  43707198 gttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 28345205 - 28345252
Alignment:
Q  212 aggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  28345205 aggttgtagaataatcataggttaagtttcctatcaaatttgggattt 28345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21369387 - 21369329
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggac 59  Q
    ||||||||||  ||||||||||||||||  |||||||||||||||| ||| ||||||||    
T  21369387 tgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggac 21369329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 31346021 - 31345951
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| | | |||||| ||||||| |||||||||||||||||||| ||||||||||    
T  31346021 gttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttggtatttgggttg 31345951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 21081134 - 21081191
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| |||| || |||||||||||||||||| ||||||||||||    
T  21081134 gttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttg 21081191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 21915511 - 21915454
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| ||||||||||| ||||||||||||| |||||    
T  21915511 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttaggttg 21915454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22502050 - 22501993
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||||||||  |||||||||||||||| ||| |||||||||||| |||| ||||    
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22509984 - 22509927
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||||||||  |||||||||||||||| ||| |||||||||||| |||| ||||    
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5031087 - 5031159
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  ||||||||||||||||   |||||||||| |||| ||| |||||||||||| |||| ||||    
T  5031087 tgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 5031159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 10684095 - 10684151
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  10684095 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 10684151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 13100897 - 13100953
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||  ||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  13100897 tgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 13100953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 20262049 - 20261993
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  20262049 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 20261993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 20916399 - 20916335
Alignment:
Q  3 tgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttc 67  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||  ||| ||||| ||||||||||    
T  20916399 tgagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttc 20916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 9976021 - 9975951
Alignment:
Q  3 tgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||| | ||||||||||||||  ||||||||||| |||| ||| ||| |||||||| |||| ||||    
T  9976021 tgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaat 9975951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22251406 - 22251460
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtg 55  Q
    ||||||||||| || ||||||||||||| |||||||||||| |||| ||| ||||    
T  22251406 tgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtg 22251460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36841321 - 36841267
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtg 55  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| ||||    
T  36841321 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 7187327 - 7187266
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| ||||| |||||| |||||||||||| |  ||||||||| |||||||||||    
T  7187327 gttaagaattgatgttctggttgtagaataatcatagattaagtttcctaacaaatttggga 7187266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 22173128 - 22173189
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||   |||| ||| |||||||||||    
T  22173128 gttaagaattgatgttcaggttgtagaataatcataggttatgttttctaacaaatttggga 22173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 12037125 - 12037417
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggttta 103  Q
    |||||||| |||||||| |||||||  ||||||||||| |||| ||| ||||||||||||||| ||||||||| | ||||||||| ||||||| ||||||    
T  12037125 gagaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaaccttgtttaatcataagtatgtaatcctgaaaaagggttta 12037224  T
Q  104 accttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataat 203  Q
    ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  12037225 accttgtagttgttaatagcttttgatgttgtagaatcagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttaataat 12037324  T
Q  204 tggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttggagaaattaagggtttttgctggaatctgtg 296  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  12037325 tggtgtttaggttgtagaataatcataggtagagactcctatcaaatttgggatttgggttggagaaattgagggtttttgctgaaatttgtg 12037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 21579164 - 21579371
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||| |||||||||||||||||||| | ||||||||| ||||||| |||    
T  21579164 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagggt 21579263  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  21579264 ttaaccttgtagttgttaatatgttttgatgttgtagaattagggttcgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgat 21579363  T
Q  201 aattggtg 208  Q
    ||||||||    
T  21579364 aattggtg 21579371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 29762826 - 29763033
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| ||||  ||||||||||||||||||| | ||||||||| ||||||| |||    
T  29762826 tgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaatcataagtatgtaatcctgaaaaagggt 29762925  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||    
T  29762926 ttaaccttgtagttgttaataagttttgatgttgtagaattagagtttgaaactaaaattgattgtagaaagagtagataatgcgatgaattaggttgat 29763025  T
Q  201 aattggtg 208  Q
    ||||||||    
T  29763026 aattggtg 29763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 22474812 - 22474643
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  22474812 aatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 22474713  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||| |||||| ||||||||||    
T  22474712 attagggtttgaaactaaaattgattgtcgaaagagtagataatctgatgaattaggttgataattggtg 22474643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 17978404 - 17978581
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||| ||||| ||||||| | ||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  17978404 gatcatctaaactaaggtaagggtgggactaaacttctataatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgat 17978503  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |||||| ||||||||||    
T  17978504 gttgtagaattagggtttgaaactaaaattgattatagaaagagcagataatccgatgaattaggttgataattggtg 17978581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 41680132 - 41680294
Alignment:
Q  42 ctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaatt 141  Q
    ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  41680132 ctaaggtaaaggtgggactaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaatt 41680231  T
Q  142 agggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataatt 204  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||| || ||| ||||||    
T  41680232 agggtttgaaactaaaattgactgtagaaggagtagataatccgatgaattatgttgataatt 41680294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 22208360 - 22208155
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaaggttt 102  Q
    |||||||| |||||||| ||||||   |||||||||||||||| ||| |||||||||| | |||| |||| |||  |  | ||||  ||||||| |||||    
T  22208360 gagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggttt 22208261  T
Q  103 aaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataa 202  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||    
T  22208260 aaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataa 22208161  T
Q  203 ttggtg 208  Q
    ||||||    
T  22208160 ttggtg 22208155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 22258264 - 22258454
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaagg 99  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| |||| ||| |||| ||||| | |||| |||| |||| |  | ||||    ||||| ||    
T  22258264 tgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaaggg 22258363  T
Q  100 tttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaa 190  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  22258364 tttaaccttgcagttgttgataggttttgatgttgtagaattaggttttgaaactaaaactgattgtagaaagagtagataatccgatgaa 22258454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 36405128 - 36405257
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||| ||||||| |||||||||||| | |||||||||    |||| ||||||||||||||||||||||||||||||||||| || ||    
T  36405128 aatctaaggtaagggtgtgactaactttctttaatcataagtatgtaatccctgaaaagggtttaaccttgtagttgttaataggttttgatgtcgtaga 36405227  T
Q  139 attagggtttgaaactaaaattaattgtag 168  Q
    |||| ||||||||||||||||| |||||||    
T  36405228 attatggtttgaaactaaaattgattgtag 36405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 22483737 - 22483620
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||||||||||| ||||| |||||||||| ||||| |||||| ||   ||| ||||| |||||||||||| |||||| ||||||| |||    
T  22483737 aattaggttttgaaactaaaatttattgttgaaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgag 22483638  T
Q  238 tttcctatcaaatttggg 255  Q
    ||||||||  ||||||||    
T  22483637 tttcctattgaatttggg 22483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 8413899 - 8413967
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  8413899 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 8413967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 19882849 - 19882781
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  19882849 gttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 19882781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 25657672 - 25657736
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  25657672 aattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 25657736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 16198723 - 16198666
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  16198723 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 16198666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 22966816 - 22966772
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  22966816 ttgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 20879565 - 20879311
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttga--tcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtt 101  Q
    |||||||| ||||| ||||||||||  ||  ||| | |||||||| ||| ||||||||||||||||||||||||| | ||| |  |  | ||||| ||||    
T  20879565 gagaagaggagcaaacttgtagagtccgaattcaaccaatctaaggtaagggtgggactaaccttctttaatcataagtatatggttctaaaaaagggtt 20879466  T
Q  102 taaccttgtagttgttaataggttttgatgttgtggaa-ttagggtttgaaact-aaaattaattgtagaaagagtagataatccgatgaactaggttaa 199  Q
    ||| ||||||||| ||||| |||||||||||| |  || |||| |||  ||| |  ||||| |||||  |||| |||| |||||| ||||| ||   |||    
T  20879465 taagcttgtagttattaat-ggttttgatgttataaaagttagtgtt--aaattgcaaattgattgttaaaagtgtaggtaatccaatgaattaacataa 20879369  T
Q  200 taattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggat 257  Q
     ||||| |||||||||||| ||||||  |||||||  ||||||| |||||||||||||    
T  20879368 gaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggat 20879311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 36732649 - 36732704
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  36732649 gttcagattgtagaataatcataggtcaagtttcctatcaaatttgggatttgggt 36732704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 23478969 - 23478912
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  23478969 gttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttg 23478912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 25483592 - 25483653
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||| ||||||| ||||||||||||||  |||||||||||||||||||||    
T  25483592 gttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttggga 25483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18761542 - 18761470
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  18761542 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaat 18761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19140858 - 19140798
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| ||||||||||    
T  19140858 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 19140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36306091 - 36306031
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| ||| |||| |||||    
T  36306091 tgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagacta 36306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 14397061 - 14397130
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  14397061 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattt-ggatttgggttg 14397130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 23661198 - 23661140
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  23661198 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 20455888 - 20455831
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaattt 252  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| |||||||    
T  20455888 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 20460866 - 20460809
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaattt 252  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| |||||||    
T  20460866 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 21697509 - 21697550
Alignment:
Q  92 aaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  21697509 aaaaagggtttaacattgtagttgttaataggttttgatgtt 21697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 26220484 - 26220415
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  26220484 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 26220415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 26222469 - 26222537
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcatagg 232  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| |||||||||||||    
T  26222469 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcatagg 26222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42817865 - 42817937
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| ||||||||| || |||| ||||    
T  42817865 tgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaat 42817937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 19880710 - 19880663
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  19880710 gttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 26454593 - 26454546
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  26454593 gttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 11775598 - 11775556
Alignment:
Q  221 aataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||  |||||||||||||||||||| |||||||    
T  11775598 aataatcataggttaagtttcctatcaaatttggggtttgggt 11775556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 17460358 - 17460416
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||| | ||||||||    
T  17460358 gttaagaattgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttg 17460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 20463096 - 20463042
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaa 249  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||    
T  20463096 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 20455152 - 20455095
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaattt 252  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||| ||||| |||||||    
T  20455152 gttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 20517032 - 20517069
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcat 76  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  20517032 aatctaaggtaagggtgggactaaccttctttaatcat 20517069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22345257 - 22345198
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||| ||  ||||||||||||||| ||| ||||||||||    
T  22345257 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggacta 22345198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22356917 - 22356858
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||| ||  ||||||||||||||| ||| ||||||||||    
T  22356917 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggacta 22356858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 22708314 - 22708354
Alignment:
Q  33 tcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||| |||||||| ||| ||||||||||||||||||||||    
T  22708314 tcatccaatctaaggtaagggtgggactaaccttctttaat 22708354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23943784 - 23943840
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtggg 57  Q
    ||||||||||| ||||||||||||||||  | ||||||||| |||| ||| ||||||    
T  23943784 tgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtggg 23943840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 40230400 - 40230193
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||| ||| |||||||||||| |||||||||||| | ||||||||||||||||| |||    
T  40230400 tgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaatcataagtatgtaatcttgaaaaagggt 40230301  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||    
T  40230300 ttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgat 40230201  T
Q  201 aattggtg 208  Q
    ||||||||    
T  40230200 aattggtg 40230193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 33243267 - 33243459
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttg 115  Q
    |||||||||||||   ||||||||||||||| ||| |||| ||||||| |||||||||||| | ||||||||||||||| | ||||||| ||||||||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaatcataagtatgtaatcttgaaatagggtttaatcttgtagttg 33243366  T
Q  116 ttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  33243367 ttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 33243459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 19565914 - 19566083
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||| ||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  19565914 aatctaaggtaagggtggtactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 19566013  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  19566014 attagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 19566083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 46741263 - 46741086
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| |||  |||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  46741263 gatcatctaacctaaggtaagtgtgggactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaattggttttgat 46741164  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||||    
T  46741163 gttgtagaattagggtttgaaactaaaattgattgtagaaagagtggataatccgatgaattaggttgataattggtg 46741086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 44023565 - 44023768
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||| ||||| ||||||||||||||||  |||||    ||||||| ||| |||| |||||||||||||||||||| | ||||||||||||||||| |||    
T  44023565 tgtgaaaagaggagcaatcttgtagagtccgatca----atctaaggtaagggtgcgactaaccttctttaatcataagtatgtaatcttgaaaaagggt 44023660  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||| |||||| ||    
T  44023661 ttaaccttgtacttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgat 44023760  T
Q  201 aattggtg 208  Q
    ||||||||    
T  44023761 aattggtg 44023768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 12623372 - 12623207
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||||||||||||||||||||||||   ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  12623372 aatctaaggtaagggtgggactaaccttctttaatcataggtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaga 12623273  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataatt 204  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||    
T  12623272 attagggtttgaaactaaaattgattgtagaaagagtagataatgcgatgaattaggttgataatt 12623207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 12424248 - 12424458
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaa-- 97  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||||||||| | |||| |||| |||  |  | ||||  ||||||||      
T  12424248 tgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaag 12424347  T
Q  98 ggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtt 197  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||    
T  12424348 ggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatgaattaggtt 12424447  T
Q  198 aataattggtg 208  Q
     ||||||||||    
T  12424448 gataattggtg 12424458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 33186907 - 33186789
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatga 189  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33186907 tgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 33186808  T
Q  190 actaggttaataattggtg 208  Q
    | |||||| ||||||||||    
T  33186807 attaggttgataattggtg 33186789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 16296828 - 16296703
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| || | |||||||||||||||||||||| ||||||||||||||  ||    
T  16296828 aattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaag 16296729  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||||||||||||||||||||||||||    
T  16296728 tttcctatcaaatttgggatttgggt 16296703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 35660845 - 35660720
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||||||||||  ||||||| ||||| || ||||||| |||||||||||| || | |||||||||||||||||||||| ||||||||||| ||  ||    
T  35660845 aattagggtttgaatttaaaattgattgttgagagagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtagaataatcatatgttaag 35660746  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||||||||||||||||||||||||||    
T  35660745 tttcctatcaaatttgggatttgggt 35660720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 9639104 - 9638841
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaagg 99  Q
    ||||||||||| || |||||||||||||  ||| |||||||||||| ||| |||||||||| | |||| |||| |||| |  ||||||  ||||||| ||    
T  9639104 tgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaaggg 9639005  T
Q  100 tttaaccttgtagttgttaataggttttgatgttgtgg-aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtta 198  Q
    |||||||||||||||||| |||  |||||||||| ||| ||||||| || |||  |  ||||  |||    |||||||||||||| |||||| |||| ||    
T  9639004 tttaaccttgtagttgttgataa-ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaattagggta 9638906  T
Q  199 ataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||||| || ||||  || |||||||||||  |||||||||||||||||||| |||||||    
T  9638905 ataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggtttgggt 9638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 14549583 - 14549482
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||  ||||| |||||| || | |||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||    
T  14549583 attgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgg 14549484  T
Q  262 gt 263  Q
    ||    
T  14549483 gt 14549482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 18463079 - 18462855
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| ||||  ||||||| |||||||  ||||||||||||||| ||||||||||| |  |    
T  18463079 aatctaaggtaaaggtgggactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttataaa 18462981  T
Q  139 attagggtttgaaacta-aaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    | |  ||||| ||| || || || ||||| ||||| |||| |||||| ||||| ||   | | ||||| ||||||| |||| ||| ||  |||||||  |    
T  18462980 agttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatg 18462881  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    |||||| |||||||||||||||||||    
T  18462880 tttcctgtcaaatttgggatttgggt 18462855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 19434778 - 19434875
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    ||||| |||||||||| ||||| |||||| ||    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  19434778 attgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 19434875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25513945 - 25513828
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatga-ctatgtaatcttgaaaaaagg 99  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| | |||| |||| ||||  | | ||||  ||||||| ||    
T  25513945 tgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaaggg 25513846  T
Q  100 tttaaccttgtagttgtt 117  Q
    |||||| |||||||||||    
T  25513845 tttaacattgtagttgtt 25513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 10694371 - 10694467
Alignment:
Q  169 aaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||||| |||||| ||||| ||   ||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  10694371 aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 10694467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25091747 - 25091675
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  25091747 tgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaat 25091675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 28386145 - 28386077
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  28386145 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 28386077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 14477687 - 14477464
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||| ||||||||||||||||||||| ||| ||||  ||||||| ||||| | |||||||| ||| ||| ||||||||||| | ||    
T  14477687 aatctaaggtaagggtggcactaaccttctttaatcatgagtatataattctgaaaaagggtttgatcttgtagtcgttgata-gttttgatgttataga 14477589  T
Q  139 a-ttagggtttgaaact-aaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    | ||||||||  ||| | ||| || ||||| ||||| |||| |||||| ||||| ||   ||  ||||| ||||||| |||| ||||||  ||| |||      
T  14477588 agttagggtt--aaattgaaatttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataacaataagtaat 14477491  T
Q  237 gtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||||||||| ||||||||    
T  14477490 gtttcctgtcaaatttggaatttgggt 14477464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 16277438 - 16277506
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  16277438 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 16277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19022438 - 19022366
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| ||| |||| ||||||| |||| ||||    
T  19022438 tgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 53387048 - 53387116
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  53387048 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 53387116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53630432 - 53630504
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| | |||||||||||||| |||||||||||| |||| ||| |||||||||||| |||| ||||    
T  53630432 tgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaat 53630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 18230642 - 18230572
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||||||||| | |||||||||||   ||||||||||||||||||||||||| ||||    
T  18230642 gttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgggatttgtgttg 18230572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 15008855 - 15008798
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  15008855 gttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttgggttg 15008798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 15344836 - 15344775
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| |||||||||||    
T  15344836 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 15344775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 51463179 - 51463240
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||| ||||| ||| |||||||||||    
T  51463179 gttaagaattgatgttcaggttgtagaataatcataggtaaagttttctaacaaatttggga 51463240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 20150831 - 20150787
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| | ||||||||||||||||||||||||||||||||||    
T  20150831 ttgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 20150787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 26921496 - 26921584
Alignment:
Q  30 tgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaac-cttgtagttgtt 117  Q
    ||||||||||| ||||| ||| ||| |||||||||||| |||||||| | ||||||||  ||||||| ||||||||  |||||||||||    
T  26921496 tgatcatctaacctaaggtaagggtaggactaaccttcattaatcataagtatgtaattctgaaaaagggtttaacatttgtagttgtt 26921584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 33849632 - 33849576
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  33849632 tgttcatgttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 33849576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 36038700 - 36038644
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  36038700 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 36038644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 49547106 - 49547162
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  49547106 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 49547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 13165188 - 13165095
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||   ||  ||||||| || ||||  || |||||||||||| |||||||||||    
T  13165188 aatctaaggtaagggtgggactaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatagttgttaata-gttttgatgtt 13165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 23802555 - 23802613
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  23802555 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42875891 - 42875829
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaac 63  Q
    ||||||||||| |||||| ||||||||| |||| ||||||| |||| ||| ||||||||||||    
T  42875891 tgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaac 42875829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 10908176 - 10908233
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||  ||||||||||    
T  10908176 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttg 10908233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 12611812 - 12611751
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  12611812 gttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 12611751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 14281182 - 14281113
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  14281182 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 14281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10356394 - 10356466
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||| |||| | |||| |||| ||| | |||||||||| |||| ||||    
T  10356394 tgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaat 10356466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 15535011 - 15534955
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  15535011 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 15534955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 26014348 - 26014285
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaa 94  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||| ||| ||||| || ||||||    
T  26014348 gatcatctaatctaaggtaagggtgggactaaccttcaataatcttgagtatgtgattttgaaa 26014285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 40620405 - 40620362
Alignment:
Q  222 ataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||    
T  40620405 ataaacataggttgagtttcctctcaaatttgggatttgggttg 40620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 15447528 - 15447586
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||| ||| ||||||||    
T  15447528 gttaagaattgatgttcaggttgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 54798024 - 54798093
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  |||||||||  |||| ||||||||||||||    
T  54798024 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatattgtagaataatcataggt 54798093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 10694204 - 10694264
Alignment:
Q  2 gtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaa 62  Q
    |||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||    
T  10694204 gtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaa 10694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 10907970 - 10908030
Alignment:
Q  2 gtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaa 62  Q
    |||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||    
T  10907970 gtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaa 10908030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19610418 - 19610346
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| || ||||||||||| |  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  19610418 tgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaat 19610346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 53646032 - 53646224
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttg 115  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttg 53646131  T
Q  116 ttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  53646132 ttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 53646224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 54330316 - 54330472
Alignment:
Q  52 ggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaa 151  Q
    |||||||||||| |||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54330316 ggtgggactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaa 54330415  T
Q  152 actaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  54330416 actaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 54330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 14152357 - 14152565
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgta--atcttgaaaaaag 98  Q
    ||||||||||| |||||||||||| |||| ||||   ||| ||||| ||| |||||||||| | |||| |||| |||| | ||||  ||  ||||||| |    
T  14152357 tgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagt-tgtatcattctgaaaaagg 14152455  T
Q  99 gtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtta 198  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||     
T  14152456 gtttaaccttgtagttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgattgtataaagagtagataatccgatgaattaggttg 14152555  T
Q  199 ataattggtg 208  Q
    ||||||||||    
T  14152556 ataattggtg 14152565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 5215651 - 5215533
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatga 189  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  5215651 tgaaaaagggtttaaccttgtagttattaataggttttgatgttgtagaattagggtttaaaactaaaattgattgtagatagagtagataatccgatga 5215552  T
Q  190 actaggttaataattggtg 208  Q
      || ||| ||||||||||    
T  5215551 cttatgttgataattggtg 5215533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 50350774 - 50351037
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaa--g 98  Q
    ||||||||||| | || | |||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||  ||||||||  |    
T  50350774 tgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaatcatgagtatataattctgaaaaaaggg 50350873  T
Q  99 gtttaacc-ttgtagttgttaataggttttgatgttgtgga-attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggt 196  Q
    |||||||| |||||||| ||  || ||||||||||| | || |||||||||  | | | || ||||||||  |||| |||| |||||| ||||  |||      
T  50350874 gtttaacctttgtagtttttgtta-gttttgatgttatagagattagggtt--agattgaatttaattgttaaaagcgtaggtaatccaatgacatagtg 50350970  T
Q  197 taataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||   |||| ||||||||||||  ||||| |||||| ||||||| |||| |||||||||||||||||    
T  50350971 tacagattgatgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggt 50351037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 45803432 - 45803557
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||||||||||| ||   ||| ||||| ||| |||||||| |||||| ||||||| |||    
T  45803432 aattaggttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgag 45803531  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||||||||  ||||||||||| ||||    
T  45803532 tttcctattgaatttgggattagggt 45803557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 263
Target Start/End: Complemental strand, 29907702 - 29907468
Alignment:
Q  32 atcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    ||||||||||||||| ||| |||||||||| | |||||||||  ||  |  | ||||  ||||||| ||||||||||||||||||||  ||||||| |||    
T  29907702 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggttt-gat 29907604  T
Q  131 gtt--gtggaattagggtttgaaactaaaatt-aattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatc 227  Q
    | |  | | |||||||||| |||| ||||||| |||||| ||||| |||| ||||  |||||| |||| || | ||||||||||  ||||  |||||| |    
T  29907603 gattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaac 29907504  T
Q  228 ataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||| ||||||||||||||||| ||||||||    
T  29907503 ataggtagaatttcctatcaaatttggaatttgggt 29907468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 263
Target Start/End: Complemental strand, 29948868 - 29948634
Alignment:
Q  32 atcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    ||||||||||||||| ||| |||||||||| | |||||||||  ||  |  | ||||  ||||||| ||||||||||||||||||||  ||||||| |||    
T  29948868 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggttt-gat 29948770  T
Q  131 gtt--gtggaattagggtttgaaactaaaatt-aattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatc 227  Q
    | |  | | |||||||||| |||| ||||||| |||||| ||||| |||| ||||  |||||| |||| || | ||||||||||  ||||  |||||| |    
T  29948769 gattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaac 29948670  T
Q  228 ataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||| ||||||||||||||||| ||||||||    
T  29948669 ataggtagaatttcctatcaaatttggaatttgggt 29948634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 263
Target Start/End: Complemental strand, 29998022 - 29997788
Alignment:
Q  32 atcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    ||||||||||||||| ||| |||||||||| | |||||||||  ||  |  | ||||  ||||||| ||||||||||||||||||||  ||||||| |||    
T  29998022 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggttt-gat 29997924  T
Q  131 gtt--gtggaattagggtttgaaactaaaatt-aattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatc 227  Q
    | |  | | |||||||||| |||| ||||||| |||||| ||||| |||| ||||  |||||| |||| || | ||||||||||  ||||  |||||| |    
T  29997923 gattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaac 29997824  T
Q  228 ataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||| ||||||||||||||||| ||||||||    
T  29997823 ataggtagaatttcctatcaaatttggaatttgggt 29997788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 12917416 - 12917515
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||| ||||||| ||||| | || ||||| |||||||||||| || | ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12917416 tttgaaattaaaattgattgttggaaaagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtaaaataatcataggtagagtttcctat 12917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 257
Target Start/End: Complemental strand, 48631387 - 48631170
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||| || |  ||||||| ||||||| |||||||||||||||| ||||||||||| | ||    
T  48631387 aatctaaggtaagggtgggactaaccttctttaatcataaatatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttataga 48631289  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  || || ||     |||| ||||| ||||| |||| |||| | ||||| ||   ||| ||||| |||||||||||| ||||||  |||||||  ||    
T  48631288 agtcagggttaaattgctaattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 48631189  T
Q  239 ttcctatcaaatttgggat 257  Q
    |||||||||||||||||||    
T  48631188 ttcctatcaaatttgggat 48631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 14641676 - 14641769
Alignment:
Q  170 aagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||| |||||| |||| ||||||||||||| || ||||  || |||||||||||  ||||||||||||||||||||||||||||    
T  14641676 aagagtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttgggatttgggt 14641769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 6805046 - 6805139
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| |||||||||| ||||| |||||| || | |||||||||||||||||||||| ||||||||||| ||  ||||| ||||||||||||||    
T  6805046 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 18890325 - 18890257
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  18890325 gttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggt 18890257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 43549806 - 43549874
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  43549806 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggt 43549874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 15566486 - 15566399
Alignment:
Q  121 aggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||| ||  ||||||||||| ||||||||||| || ||||||| ||||||||||| |||||| |||||| ||||||||||    
T  15566486 aggttttgatgtggtaaaattagggtttaaaactaaaattgatcgtagaaatagtagataatctgatgaattaggttgataattggtg 15566399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 21845648 - 21845741
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||| || |  ||||||| ||||||| |||||||||||||||| |||||||||||    
T  21845648 aatctaaggtaagggtgggactaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgtt 21845741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 55291752 - 55291822
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||    
T  55291752 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttg 55291822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 42429 - 42361
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  42429 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 42361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17541528 - 17541456
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||| ||| |||||||||||| |||| ||||    
T  17541528 tgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaat 17541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 5224224 - 5224154
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  5224224 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 5224154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 26054585 - 26054655
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  26054585 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 26054655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 46722737 - 46722807
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| ||| |||||    
T  46722737 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttcggttg 46722807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 22652660 - 22652603
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  22652660 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 22652603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 13437128 - 13437072
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  13437128 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 13437072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 18893584 - 18893516
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||| ||||||||||||||||||||  ||||| |||||||||||||| |||||||    
T  18893584 gttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttggggtttgggt 18893516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22306541 - 22306613
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  22306541 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 22306613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 15465996 - 15465926
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||| ||||||||||||||    
T  15465996 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgggatttgggttg 15465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 15566748 - 15566706
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgt 132  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  15566748 tgaaaaagggtttaaccttgtagttgttaataggttttgatgt 15566706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 6820071 - 6820010
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| |||||||||||    
T  6820071 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 6820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 16979799 - 16979742
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||| ||||||||||    
T  16979799 gttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttg 16979742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 3803703 - 3803647
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  3803703 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 3803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 10555208 - 10555148
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| ||||||||| || ||||||||||||||  ||||||||||||||||||||    
T  10555208 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 10555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 12305952 - 12305896
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  12305952 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 12305896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 16324691 - 16324759
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||| |||| |  |||||||||||||||||||| |||||||    
T  16324691 gttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggggtttgggt 16324759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17047220 - 17047148
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| || |||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  17047220 tgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 17047148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 43929280 - 43929224
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||| ||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  43929280 tgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggt 43929224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 3160623 - 3160706
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaatag 122  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||| ||||  | ||||  |||||||| ||||||||||| ||||    
T  3160623 aatctaaggtaagggtgagactaaccttctttaatcatgagtatataattctaaaaatgggtttaactttgtagttgttgatag 3160706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 41172341 - 41172396
Alignment:
Q  13 agcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttct 68  Q
    |||||||||||||||| |||||||||||| |||| ||| |||||||||||| ||||    
T  41172341 agcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttct 41172396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 29544196 - 29544249
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttg 260  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  29544196 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttg 29544249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17045060 - 17044988
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  || |||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  17045060 tgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 17044988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 48043642 - 48043698
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||| ||||| |||||| ||||||| |||||||||||  ||||||||||||||||    
T  48043642 tgttcaagttgtagaataaacataggttgagtttcctattgaatttgggatttgggt 48043698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 54521652 - 54521596
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| ||||||  |||||| ||||||||||||||||||||| |||||||    
T  54521652 tgttcagattgtagaataaatataggttgagtttcctatcaaatttggggtttgggt 54521596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 13522474 - 13522561
Alignment:
Q  169 aaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||||||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  ||||||   ||||||||||||||||||||    
T  13522474 aaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 13522561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 11563789 - 11563747
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||    
T  11563789 gatcatctaatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 16643984 - 16643926
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  || |||||| ||||||||    
T  16643984 gttaagaattgatgttcaggttgtagaataatcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 24152535 - 24152593
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||| || ||||||||    
T  24152535 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 50243714 - 50243656
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||| ||||| ||||||||||||||  ||||||||| ||||||||    
T  50243714 gttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 10551236 - 10551167
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||| | ||   |||||  ||||||||| ||||| ||||||||||||||    
T  10551236 tgtagaaagagtagataatctgatggattaaagtaataggtggtgttcatgttgtagaataatcataggt 10551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 11259522 - 11259453
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||| ||||||||||||||||  ||| ||||||| |||| ||| |||| ||||||| |||| ||||    
T  11259522 gagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaat 11259453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 14508778 - 14508733
Alignment:
Q  163 ttgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||||||||||||||||||| |||||| ||| || ||||||||||    
T  14508778 ttgtagaaagagtagataatctgatgaattagattgataattggtg 14508733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 17694158 - 17694089
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||| ||||||||||||||||  ||||||||||| |||  ||| |||| ||||||| |||| ||||    
T  17694158 gagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaat 17694089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 21619314 - 21619245
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||| ||||||||||    
T  21619314 tgtagaaagagtagataatcagatgaattaaagtaataggtggtgttcatgttgtagaagaatcataggt 21619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 36167463 - 36167394
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||| ||||||||||    
T  36167463 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaagaatcataggt 36167394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 3527328 - 3527376
Alignment:
Q  215 ttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||| |||||| ||||||| |||||||||||  ||||||||||||||||    
T  3527328 ttgtagaataaacataggttgagtttcctattgaatttgggatttgggt 3527376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 6003247 - 6003207
Alignment:
Q  33 tcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||| |||||||| ||| ||||||||||||||||||||||    
T  6003247 tcatccaatctaaggtaagggtgggactaaccttctttaat 6003207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 10833456 - 10833516
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| ||| ||| |||  ||||||||||||||  ||||||||||||||||||||    
T  10833456 gttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttggg 10833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 12155030 - 12155058
Alignment:
Q  48 taatggtgggactaaccttctttaatcat 76  Q
    |||||||||||||||||||||||||||||    
T  12155030 taatggtgggactaaccttctttaatcat 12155058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15931466 - 15931538
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| || |||||||||||||  |||||| |||| |||| ||| |||| ||||||| |||| ||||    
T  15931466 tgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaat 15931538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35354696 - 35354624
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||| ||||| ||||||||||||||||   |||||||||| |||| |||  ||||||||||| |||| ||||    
T  35354696 tgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaat 35354624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 14160814 - 14161021
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    |||| |||||| ||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||| ||||||  |||    
T  14160814 tgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaggggt 14160913  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||    
T  14160914 ttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatgaattaggttgat 14161013  T
Q  201 aattggtg 208  Q
    | ||||||    
T  14161014 acttggtg 14161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 15119265 - 15119472
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||||||||   ||| ||||| ||| ||| ||||||||||||||||||||| | ||||||||||||||||| |||    
T  15119265 tgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaatcataagtatgtaatcttgaaaaagggt 15119364  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||    
T  15119365 ttaaccttgtagttgttaatagattttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgat 15119464  T
Q  201 aattggtg 208  Q
    ||||||||    
T  15119465 aattggtg 15119472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 14318128 - 14317959
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||||||| |||||||||||||||| | ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||    
T  14318128 aatctaaggtaagggtgggacaaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtaga 14318029  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| | |||| ||||||||||    
T  14318028 attagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaatttggttgataattggtg 14317959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 9743093 - 9743244
Alignment:
Q  57 gactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaa 156  Q
    |||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  9743093 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagggtttgaaactaa 9743192  T
Q  157 aattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  9743193 aattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 9743244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 43276702 - 43276909
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaagg 99  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| |||| |||  |  | ||||  ||||||  ||    
T  43276702 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaat-gg 43276800  T
Q  100 tttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaa 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||| |    
T  43276801 tttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtaaataatccgatgaattaggttga 43276900  T
Q  200 taattggtg 208  Q
    |||||||||    
T  43276901 taattggtg 43276909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 8513803 - 8513920
Alignment:
Q  92 aaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtag-aaagagtagataatccgatgaa 190  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||    
T  8513803 aaaaagggtttaaccttgtagttgtttataggttttgatgctgtagaattagggtttgaaactaaaactaattgtagaaaagagtagataatccgaagaa 8513902  T
Q  191 ctaggttaataattggtg 208  Q
     |||||| ||||||||||    
T  8513903 ttaggttgataattggtg 8513920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 13315176 - 13315303
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||| ||||||| ||||| |||||||||| ||| || ||||| || |  ||||||||||||||||||||| ||||||||||||||||||    
T  13315176 aattaggttttgaaattaaaattgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagag 13315275  T
Q  238 tttcctatcaaatttgggatttgggttg 265  Q
    ||| ||||||||||||||||||||||||    
T  13315276 ttttctatcaaatttgggatttgggttg 13315303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 19282995 - 19282880
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||| ||||||| ||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  19282995 tttgaaattaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctat 19282896  T
Q  246 caaatttgggatttgg 261  Q
    ||||||||| ||||||    
T  19282895 caaatttggaatttgg 19282880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 38295543 - 38295434
Alignment:
Q  154 taaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||||| ||||| | |||||||| |||||||||||| || | |||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||    
T  38295543 taaaattgattgttgcaagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttg 38295444  T
Q  254 ggatttgggt 263  Q
    ||||||||||    
T  38295443 ggatttgggt 38295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 12754784 - 12754885
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||| ||||| |||||| ||   |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  12754784 attgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgg 12754883  T
Q  262 gt 263  Q
    ||    
T  12754884 gt 12754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 47975010 - 47975111
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||| ||| |||||||||||| || | |||||||||||||||||||||| |||||||||||| |  ||||| ||||||||||||| ||||||    
T  47975010 attgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgg 47975109  T
Q  262 gt 263  Q
    ||    
T  47975110 gt 47975111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 4325997 - 4325929
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  4325997 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggt 4325929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 14105578 - 14105648
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||    
T  14105578 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttg 14105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 14415595 - 14415665
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||    
T  14415595 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttg 14415665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 17070421 - 17070510
Alignment:
Q  174 gtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| |||||| |||| ||||||||||||| || ||||  || |||||||||||  |||||||||||||||||||| |||||||    
T  17070421 gtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggtttgggt 17070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 44190367 - 44190435
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||    
T  44190367 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggt 44190435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 708675 - 708733
Alignment:
Q  197 taataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    |||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||    
T  708675 taataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttggg 708733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 1856551 - 1856621
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  1856551 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 1856621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12465218 - 12465290
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  12465218 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 12465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 14188444 - 14188512
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||| ||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  14188444 gttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 14188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 263
Target Start/End: Original strand, 42565829 - 42566052
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||| |||||| ||||||||||||| | ||| ||||  ||||||| ||||||| |||||||||||| |||  ||||| |||| | ||    
T  42565829 aatctaaggtaagggtgagactaatcttctttaatcataaatatataattctgaaaaagggtttaatcttgtagttgttgata-attttgttgttataga 42565927  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  ||||| ||   ||| || ||||| ||||| |||  |||||| ||||| ||   ||  ||||| |||||||||||| ||||||  |||||||  ||    
T  42565928 agttaggtttaaattgaaatttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgt 42566027  T
Q  239 ttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||||  ||||||||    
T  42566028 ttcctatcaaatttgaaatttgggt 42566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 13256594 - 13256524
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| ||||| |||||| ||||| | |||||||||||   ||||||||||||||||||||||||||||||    
T  13256594 gttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggatttgggttg 13256524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 13917723 - 13917793
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  13917723 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatctgggttg 13917793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 19195078 - 19195024
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  19195078 ttcagattgtagaataatcataggttaagtttcctatcaaatttgggatttgggt 19195024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 16550167 - 16550224
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||| ||||||||||||||||||||||||    
T  16550167 gttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttg 16550224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 16615495 - 16615438
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||| ||||||||||||||||||||||||    
T  16615495 gttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttg 16615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8851117 - 8851189
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  8851117 tgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 8851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 11662007 - 11661939
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| || |||| ||||||  |||||||||||||||||||| |||||||    
T  11662007 gttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggggtttgggt 11661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12372368 - 12372296
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||| |||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  12372368 tgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 12372296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13147430 - 13147502
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||  |||| ||| |||||||||||| |||| ||||    
T  13147430 tgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaat 13147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 13648183 - 13648119
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    ||||| ||||| |||| ||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  13648183 gttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggattt 13648119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 16108021 - 16108077
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  16108021 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 16108077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 16462970 - 16462910
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| |||||||||||| |||||||||||| |  ||||||||||||||||||||    
T  16462970 gttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg 16462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 17505115 - 17505183
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||  |||||||    
T  17505115 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggagtttgggt 17505183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 17548099 - 17548031
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||  |||||||    
T  17548099 gttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggagtttgggt 17548031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 23664285 - 23664341
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  23664285 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 23664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 32160326 - 32160418
Alignment:
Q  169 aaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||||||| |||||| ||||| ||   ||| |||||  ||||||| ||| |||||| ||||||| ||||||||||||||||||| |||||||    
T  32160326 aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgg 32160418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32433547 - 32433619
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  32433547 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 32433619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 39431338 - 39431406
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||| ||   |||||||||||||| ||||||||||||    
T  39431338 gttaagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggatttgggt 39431406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 14274117 - 14274062
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| |||||||||||| ||||||||||||||  ||||||||| |||||||||||    
T  14274117 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 14274062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 25926450 - 25926520
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| |||||||  |||||||||| |||||||||||||||||||    
T  25926450 gttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgggatttgggttg 25926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 25942366 - 25942312
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| |||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 25942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 37539334 - 37539280
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||| ||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggt 37539280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 48274415 - 48274349
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcata 230  Q
    |||||||||||||||||||| |||||| ||   |||||| ||||||||| ||||| |||||||||||    
T  48274415 tgtagaaagagtagataatctgatgaattaaagtaataagtggtgttcatgttgtagaataatcata 48274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 8488144 - 8488197
Alignment:
Q  92 aaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattaggg 145  Q
    ||||| ||||||||||| |||||||| ||||||||||||| ||| |||||||||    
T  8488144 aaaaagggtttaaccttatagttgtttataggttttgatgctgtagaattaggg 8488197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 12127124 - 12127193
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||| |||||||| ||||||   |||||||||||||||| ||| |||||||||||| |||| ||||    
T  12127124 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaat 12127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 37539541 - 37539465
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggactaaccttctttaatcatga 78  Q
    |||||||| ||||| |||||||||| ||  ||||||||||||||  ||| |||||||||||| |||| |||||||||    
T  37539541 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataatcatga 37539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 58371 - 58431
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||||| | |||||||||||| |  |||||||||||||||| ||| ||||||||||    
T  58371 tgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggacta 58431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11067562 - 11067490
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||| ||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  11067562 tgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 11067490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 11304077 - 11304021
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||  |||||||    
T  11304077 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggtgtttgggt 11304021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12322888 - 12322960
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||| || ||||||||||||||||  ||||||||||| |||| ||| ||||| |||||| |||| ||||    
T  12322888 tgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaat 12322960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16999530 - 16999458
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| || |||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  16999530 tgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 16999458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 29797440 - 29797384
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  29797440 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 29797384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 29801259 - 29801203
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  29801259 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 29801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 33060494 - 33060271
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||||| | | ||||  || |||| |||||||  |||| |||||| |||  |||||||||  | ||    
T  33060494 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattctggaaaagggtttaattttgttgttgtttata-attttgatgtaataga 33060396  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  ||||||||    || || ||||| ||||| ||||  ||||| | ||| ||   ||| ||||| ||||||||| || ||||||  |||||||  ||    
T  33060395 agttaggtttgaattgcaatttgattgttgaaagtgtaggcaatccaaagaattaatataaaaattgatgttcaggtcgtagaataacaataggtaatgt 33060296  T
Q  239 ttcctatcaaatttgggatttgggt 263  Q
    ||| |||| ||||||||||||||||    
T  33060295 ttcatatcgaatttgggatttgggt 33060271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 19195691 - 19195628
Alignment:
Q  15 caatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatga 78  Q
    ||||||||||||||  |||||||||||||||| ||| |||||||||| | |||| |||| ||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatga 19195628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 29052347 - 29052394
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||    
T  29052347 gttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 10063021 - 10063090
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||  |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  10063021 tgtagaaagagtagataatttgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 10063090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 13864513 - 13864574
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| ||||||| ||||  |||||||||||||  ||||||||| |||||||||||    
T  13864513 gttaagaattgatgttcagattgtataataatcataggttaagtttcctaacaaatttggga 13864574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13744469 - 13744528
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||| ||  ||||||||||||||| ||| ||||||||||    
T  13744469 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggacta 13744528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 21661318 - 21661278
Alignment:
Q  33 tcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||| |||||| ||| ||||||||||||||||||||||    
T  21661318 tcatctagtctaaggtaagggtgggactaaccttctttaat 21661278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 38299841 - 38299782
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttga--tcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||| |||  |||||||||||||| ||| ||||||||||    
T  38299841 gagaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggacta 38299782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 255
Target Start/End: Complemental strand, 25922092 - 25921841
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggttta 103  Q
    |||||||| |||||||| ||||||   |||||||||||||||| ||| ||||||||||||||| ||||||||| | ||||||||| | ||||| ||||||    
T  25922092 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaaccttatttaatcataagtatgtaatcctaaaaaagggttta 25921993  T
Q  104 accttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataat 203  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||||| |||||| || | |||| ||    
T  25921992 accttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgattgtagaaagagtaaataatctgatgaattaaggtaatgat 25921893  T
Q  204 tggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||||||||||||| ||||||||||||| | ||||| |||| || ||||||    
T  25921892 tggtgttcaggttgtagaataatcataggaaaagttttctataaattttggg 25921841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 23431420 - 23431612
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttg 115  Q
    |||||||||||||  |||||||||||||||| |||  |||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttg 23431519  T
Q  116 ttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
     ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23431520 ctaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 23431612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 31734801 - 31734594
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||| ||||   ||| ||||| ||| ||||||||||||||||||||||||| | ||||||||  ||||||| |||    
T  31734801 tgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaaaagggt 31734702  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||||||| | |||| ||    
T  31734701 ttaaccttgcagttgttaataggttttgatgttgtaaaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaatttggttgat 31734602  T
Q  201 aattggtg 208  Q
    ||||||||    
T  31734601 aattggtg 31734594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 18455060 - 18455238
Alignment:
Q  30 tgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttga 129  Q
    ||||||||||| ||||| ||| ||||||| ||||||||||||||||| | ||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  18455060 tgatcatctaacctaaggtaagggtgggagtaaccttctttaatcataagtatgtaatcctgaaaaaggttttaaccttgtagttgttaataggttttga 18455159  T
Q  130 tgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    | |||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  18455160 tattgtagaattagggtttgaaactagaattgatagtagaaagagtagataatccgatgaattaggttgataattggtg 18455238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 22557311 - 22557135
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||| |||||||||||| |||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  22557311 gatcatctaacctaaggtaagggtgggagtaaccttcttta-tcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgat 22557213  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| ||||| |||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  22557212 gttgtagaattcgggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 22557135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 7217232 - 7217408
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||  ||||| ||| |||| |||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  7217232 gatcatctagcctaaggtaagggtgagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg-tttgat 7217330  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |  ||| ||||||||||    
T  7217331 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattcagttgataattggtg 7217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 32259901 - 32259732
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    ||||| || ||| |||| |||||||||||||||||||| | ||||||||| |||||||  |||||||||||||||| |||||| ||||||||||||| ||    
T  32259901 aatcttaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagagtttaaccttgtagtttttaataagttttgatgttgtaga 32259802  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  32259801 attagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 32259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 23658093 - 23657986
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatga 189  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23658093 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaataagggtttgaaactaaaattgattgtagaaagagtagataatccgatga 23657994  T
Q  190 actaggtt 197  Q
    | ||||||    
T  23657993 attaggtt 23657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 29045221 - 29045094
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||    
T  29045221 aattaggttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagag 29045122  T
Q  238 tttcctatcaaatttgggatttgggttg 265  Q
    ||| ||||||||||||||||||| ||||    
T  29045121 ttttctatcaaatttgggatttgagttg 29045094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 1819045 - 1818915
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttga--tcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtt 101  Q
    |||||||| ||||| ||| |||||| |||  ||| | |||||||| ||| |||| |||||||||||||||||||||| ||| || |  ||||||| ||||    
T  1819045 gagaagaggagcaagcttatagagtctgaattcaaccaatctaaggtaagggtgagactaaccttctttaatcatgagtatatagttctgaaaaagggtt 1818946  T
Q  102 taaccttgtagttgttaataggttttgatgtt 133  Q
    ||| |||||||||||||||| |||||||||||    
T  1818945 taagcttgtagttgttaata-gttttgatgtt 1818915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 13765248 - 13765180
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  13765248 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 13765180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 23956764 - 23956696
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  23956764 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 23956696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 31021872 - 31021940
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  31021872 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 31021940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 23415806 - 23415736
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  23415806 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 23415736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 27557564 - 27557499
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttg 260  Q
    |||||||||||  ||||||||||| |||||| ||||||| |||||| |||||||||||||||||||    
T  27557564 gttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgggatttg 27557499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7828066 - 7827994
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  7828066 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 7827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23150245 - 23150317
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  23150245 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 23150317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 23226008 - 23226066
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  23226008 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 255
Target Start/End: Original strand, 25601326 - 25601538
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaacctt-gtagttgttaataggttttgatgttgtgg 137  Q
    |||||||| ||| || | ||||||||||| |||||||| |  |||||||  ||||||| ||||||||||| ||||||||||    ||||| ||||| | |    
T  25601326 aatctaaggtaagggagagactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgtagttgtta----gttttcatgttatag 25601421  T
Q  138 aa-ttagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    || |||||||| ||   | || ||||||||  ||||||||| |||||| | ||| || | ||||||||| |||||| |||||  |||||||||||| |||    
T  25601422 aaattagggttagat--tgaatttaattgttaaaagagtaggtaatccaaagaattaaggtaataattgatgttcatgttgtataataatcataggaaga 25601519  T
Q  237 gtttcctatcaaatttggg 255  Q
     ||| |||| |||||||||    
T  25601520 attttctataaaatttggg 25601538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 13285841 - 13285765
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgat--catctaatctaagataatggtgggactaaccttctttaatcatga 78  Q
    |||||||| ||||| |||||||||| |||   ||||||||||||| ||| ||||||||||||||||| |||||||||    
T  13285841 gagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataatcatga 13285765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 15891734 - 15891791
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| |||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  15891734 gttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttg 15891791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 15900819 - 15900876
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| |||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  15900819 gttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttg 15900876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17318124 - 17318184
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| ||||||||||    
T  17318124 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 19825614 - 19825698
Alignment:
Q  170 aagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgg 254  Q
    |||||||||| ||  |||||| |||| ||||||||||||| || ||||  || |||||||||||  |||||||||||||||||||    
T  19825614 aagagtagatgatatgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttgg 19825698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 28288669 - 28288725
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  28288669 tgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 28288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 25619048 - 25619106
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  25619048 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 16447892 - 16447961
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  16447892 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 16447961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 20556183 - 20556244
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  20556183 gttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 20556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 21119944 - 21120013
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  21119944 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 21120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 12943019 - 12942963
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| ||||||  |||||| ||||||||||||||||||||| |||||||    
T  12943019 tgttcagattgtagaataaatataggttgagtttcctatcaaatttggggtttgggt 12942963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19655189 - 19655261
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  19655189 tgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 19655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27125435 - 27125507
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  27125435 tgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 27125507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 34140415 - 34140529
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtt 101  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||| ||| |||||||||| | |||| |||| |||  | | |||| ||||||   ||||    
T  34140415 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataatgggtttataattttgaaatctggtt 34140513  T
Q  102 taaccttgtagttgtt 117  Q
    ||| ||||||||||||    
T  34140514 taatcttgtagttgtt 34140529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 34153031 - 34153090
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||| ||| ||||||||||    
T  34153031 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggacta 34153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 15173632 - 15173671
Alignment:
Q  222 ataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  15173632 ataaacataggttgagtttcctatcaaatttgggatttgg 15173671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20410470 - 20410525
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgg 56  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||    
T  20410470 tgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtgg 20410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 18703660 - 18703590
Alignment:
Q  3 tgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||| | ||||||||||||||  ||||||||||| |||| |||  ||||||||||| |||| ||||    
T  18703660 tgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaat 18703590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 18709595 - 18709525
Alignment:
Q  3 tgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||| | ||||||||||||||  ||||||||||| |||| |||  ||||||||||| |||| ||||    
T  18709595 tgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaat 18709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 35057430 - 35057376
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| |||||||| || ||  ||||| ||||||||||||||||||||||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggt 35057376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 611689 - 611640
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||||||| || ||||||||||||||  ||||||||| |||||||||||    
T  611689 tgttcaggtggtagaataatcataggttaagtttcctaacaaatttggga 611640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 19102600 - 19102669
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||| ||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  19102600 tgtagaaagagtggataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 19102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 259
Target Start/End: Original strand, 24506163 - 24506331
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatga 189  Q
    ||||||| |||||||  ||||||||||| |||| |||||||||| | ||| |  ||||| ||    || |||||||| ||||| |||| |||||| ||||    
T  24506163 tgaaaaagggtttaattttgtagttgttgatag-ttttgatgttatagaagttaggtttaaattgtaatttaattgttgaaagtgtaggtaatccaatga 24506261  T
Q  190 actaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    | |||  ||| ||||| |||||  ||| | ||||||| ||||| |  ||||| |||||||||||||||||    
T  24506262 attagtataaaaattgatgttcttgttttagaataataataggcaatgtttcttatcaaatttgggattt 24506331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 13285634 - 13285582
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    |||||||||| |||||||| || ||  |||||||||||||||| |||||||||    
T  13285634 ttcaggttgtagaataatcttaagttaagtttcctatcaaattagggatttgg 13285582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 18459362 - 18459302
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaagg 99  Q
    |||||||| ||| |||||||||||||| |||||||||||| ||| | ||  ||||||||||    
T  18459362 aatctaaggtaagggtgggactaacctactttaatcatgagtatatgattctgaaaaaagg 18459302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 136; Significance: 6e-71; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10404 - 10611
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||| ||||   ||| ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||    
T  10404 tgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggt 10503  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||    
T  10504 ttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatacgatgaattaggttgat 10603  T
Q  201 aattggtg 208  Q
    ||||||||    
T  10604 aattggtg 10611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3968 - 3864
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||  ||||||||| ||||||| ||||   ||| ||||| ||| |||| ||| |||||||||||| ||| | ||||||||| ||||||| | |    
T  3968 tgtgagaagatgagcaatcttatagagttcgatcgattaacctaaggtaagggtgtgaccaaccttctttaaacataagtatgtaatcctgaaaaaggat 3869  T
Q  101 ttaac 105  Q
    |||||    
T  3868 ttaac 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 26762496 - 26762289
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||||||||||||||||||||| ||||   ||| ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||    
T  26762496 tgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcataattatgtaatcctgaaaaagggt 26762397  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||| ||||||| |||||| ||    
T  26762396 ttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtaaataattcgatgaattaggttgat 26762297  T
Q  201 aattggtg 208  Q
    ||||||||    
T  26762296 aattggtg 26762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 14025795 - 14025972
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  14025795 gatcatctaatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagattttgat 14025894  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||  |||||||||||||||||| |||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  14025895 gttgtataattagggtttgaaactacaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 14025972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 8503849 - 8504053
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggttta 103  Q
    ||||| || |||||||| ||||||   ||| ||||||| |||| ||| |||||||||||||||||| |||||| | ||||||||| |||| ||  |||||    
T  8503849 gagaataggagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttcttcaatcataagtatgtaatcctgaacaagagttta 8503948  T
Q  104 accttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataat 203  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| |||||    
T  8503949 accttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataat 8504048  T
Q  204 tggtg 208  Q
    |||||    
T  8504049 tggtg 8504053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 8833194 - 8833371
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||| | ||| ||||||||| ||||||||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  8833194 gatcatctaacctagggtaagggtgggactgaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttatagttgttaataggttttgat 8833293  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||| |||||| ||||||||||    
T  8833294 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgataattggtg 8833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 26750095 - 26749919
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| |||| |||||||||| ||||||||| | ||| ||||| ||||||  |||||||||||||||||||||||| ||||||||    
T  26750095 gatcatctaacctaaggtaagggtgagactaaccttttttaatcataagtatataatcctgaaaaggggtttaaccttgtagttgttaataagttttgat 26749996  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| ||||||||| || ||||||||||| ||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  26749995 gttgtagaattaggg-ttaaaactaaaattgatcatagaaagagtagataatccgatgaattaggttgataattggtg 26749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 1626910 - 1627023
Alignment:
Q  35 atctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttg 134  Q
    |||||| ||||| ||| |||| |||||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  1626910 atctaacctaaggtaagggtgtgactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttg 1627009  T
Q  135 tggaattagggttt 148  Q
    |  |||||| ||||    
T  1627010 taaaattagagttt 1627023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 263
Target Start/End: Complemental strand, 21504232 - 21503971
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttga--tcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtt 101  Q
    |||||||| ||||| ||||||||||  ||  ||| | |||||||| ||| ||||||||||||||||||||||||| | ||| |  |  ||||||| ||||    
T  21504232 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaaaggtgggactaaccttctttaatcataagtatatggttctgaaaaagggtt 21504133  T
Q  102 taaccttgtagttgttaataggttttgatgttgtggaa-ttagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    |||  |||||||||||| ||| |||||||||| | ||| ||||||||  |     ||||| ||||| |||||||||| | |||| ||||| ||   |||     
T  21504132 taagtttgtagttgttagtag-ttttgatgttatagaaattagggttaaatttgcaaattcattgttgaaagagtaggtgatccaatgaattaacataag 21504034  T
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    || || |||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||    
T  21504033 aactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggt 21503971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 36508862 - 36508959
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    ||||| |||||||||| ||||| |||||| || | |||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  36508862 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 36508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 33472714 - 33472782
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  33472714 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggt 33472782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 27868725 - 27868793
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  27868725 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 27868793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 17011615 - 17011558
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  17011615 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 17011558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 23199165 - 23199297
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcat-gactatgtaatcttgaaaaaagg 99  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||||||||| | |||| |||| || |  | | ||||  ||||||| ||    
T  23199165 tgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatgg 23199264  T
Q  100 tttaaccttgtagttgttaataggttttgatgtt 133  Q
    ||||||||||||||||||| || |||||||||||    
T  23199265 tttaaccttgtagttgttagta-gttttgatgtt 23199297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 18419353 - 18419285
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| |||||||||||| |  |||||||||||||||||| |||||||||    
T  18419353 gttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagatttgggt 18419285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 24068235 - 24068191
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  24068235 ttgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 24068191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 21398956 - 21399018
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||||||||| |||||| |||||| ||||||| |||| |||||||||||||||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggt 21399018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 24594220 - 24594282
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  24594220 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 24594282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 24668314 - 24668376
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  24668314 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 24668376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 24738083 - 24738145
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  24738083 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 24738145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 24750852 - 24750914
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||||||| || ||||||||||||||  |||||||||||||||||||| |||||||    
T  24750852 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggt 24750914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 265925 - 265872
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||    
T  265925 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgg 265872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 21300017 - 21300074
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||| |||| ||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21398602 - 21398659
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtggga 58  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| ||| |||||||    
T  21398602 tgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtggga 21398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 18318322 - 18318391
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  18318322 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 18318391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 20765367 - 20765436
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||| ||||||||| | ||| ||||||||||||||    
T  20765367 tgtagaaagagtagataatctgatgaattaaagtaataagtggtgttcatgatgtagaataatcataggt 20765436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 29448727 - 29448670
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||||||| |||||| ||||    
T  29448727 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttg 29448670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 9776995 - 9776939
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||||||  |||||||||||||||||||| |||||||    
T  9776995 tgttcagattgtagaataaacataggttaagtttcctatcaaatttggggtttgggt 9776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 37804235 - 37804291
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||| |||||| |||| || ||||||||||||||||||||| |||||||    
T  37804235 tgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggt 37804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 41875755 - 41875811
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||  ||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  41875755 tgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 41875811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 30138247 - 30138296
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    |||||||||||| ||||||||||||||  ||||||| | |||||||||||    
T  30138247 tgttcaggttgtagaataatcataggttaagtttccaaacaaatttggga 30138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 44892513 - 44892336
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  44892513 gatcatctaacctaagttaagggtgggactaaccttctttaatcataagtatgtaatcttgaaaaaggatttaaccttgtagttgttaataggttttgat 44892414  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
     |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  44892413 attgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 44892336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 41225412 - 41225619
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||| ||||  ||||||||||| |||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||    
T  41225412 tgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggt 41225511  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||| | |||| ||    
T  41225512 ttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatgaatttggttgat 41225611  T
Q  201 aattggtg 208  Q
    ||||||||    
T  41225612 aattggtg 41225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 41226665 - 41226872
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||| ||||  ||||||||||| |||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||    
T  41226665 tgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggt 41226764  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat 200  Q
    ||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||| | |||| ||    
T  41226765 ttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaaaattgaatgtagaaagagtagataatccgatgaatttggttgat 41226864  T
Q  201 aattggtg 208  Q
    ||||||||    
T  41226865 aattggtg 41226872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 14792551 - 14792728
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  14792551 gatcatctaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggtttcgat 14792650  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||| |||||| ||||||||||    
T  14792651 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgataattggtg 14792728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 296
Target Start/End: Original strand, 21243746 - 21243991
Alignment:
Q  32 atcatctaatctaaga-taatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||||||||  ||| |||| |||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||           
T  21243746 atcatctaatctaagggtaagggtgagactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg------- 21243838  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcata 230  Q
           ||||       |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  21243839 -------aatt-------gaaactaaaattgattgtagaaagagtagataatccgatgaattaggttaataattggtgttcaggttgtagaataatcata 21243924  T
Q  231 ggtagagtttcc-tatcaaatttgggatttgggttggagaaattaagggtttttgctggaatctgtg 296  Q
    || |||||| || |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  21243925 ggcagagttcccttatcaaatttgggattggggttggagaaattgagggtttttgctgaaatctgtg 21243991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 18121667 - 18121490
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||| ||||||||||||||||| | ||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  18121667 gatcatctaacctaaggtaagggtgggattaaccttctttaatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgat 18121568  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||| ||||||||||||||||| || ||| |||||||||||||||||||||| |||||| ||||||||||    
T  18121567 gttgtagaattaaggtttgaaactaaaattgatcgtaaaaagagtagataatccgatgaattaggttgataattggtg 18121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 38887074 - 38887252
Alignment:
Q  30 tgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttga 129  Q
    ||||||||||| ||||| ||| ||||  ||||||||||||||||||| | ||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  38887074 tgatcatctaacctaaggtaagggtgaaactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttga 38887173  T
Q  130 tgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||| |||||||||||||||||||||| | || ||||||||||||||||| | |||||| |||||| ||||||||||    
T  38887174 tgttgtagaattagggtttgaaactaaaagtgatcgtagaaagagtagataaactgatgaattaggttgataattggtg 38887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 17901905 - 17902024
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17901905 tttgaaactaaaattgattgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 17902004  T
Q  246 caaatttgggatttgggttg 265  Q
    ||||||||||||||||||||    
T  17902005 caaatttgggatttgggttg 17902024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 21239146 - 21239265
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  21239146 tttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctat 21239245  T
Q  246 caaatttgggatttgggttg 265  Q
    ||||||| ||||||||||||    
T  21239246 caaatttaggatttgggttg 21239265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 8306561 - 8306436
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| || | ||||||||||||||||| |||| ||||||||||||||  ||    
T  8306561 aattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaag 8306462  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||||||||||||||||||||||||||    
T  8306461 tttcctatcaaatttgggatttgggt 8306436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 6834126 - 6833996
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatga---actaggttaataattggtgttcaggttgtggaataatcataggta 234  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||||||||||   |||| | |||||||||||||||||||||| |||||||||||||||    
T  6834126 aattaggttttgaaactaaaattgattgttgaaagagtaggtaatccgatgatgaactaaggtaataattggtgttcaggttgtagaataatcataggta 6834027  T
Q  235 gagtttcctatcaaatttgggatttgggttg 265  Q
    |||||| |||||||||||||||||| |||||    
T  6834026 gagttttctatcaaatttgggattttggttg 6833996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 7052132 - 7052233
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||| ||||| |||||| || | ||||||||||||||||||||||  |||||||||||||  |||||||||||| |||||||||||||    
T  7052132 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgg 7052231  T
Q  262 gt 263  Q
    ||    
T  7052232 gt 7052233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 24723579 - 24723680
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||  ||||  |||||| || | |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  24723579 attgttgaaagagtatgtaatatgatgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgg 24723678  T
Q  262 gt 263  Q
    ||    
T  24723679 gt 24723680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 263
Target Start/End: Original strand, 21188030 - 21188253
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||| ||||||||||| ||| |||| |||| ||| | |||||  ||||||||||| ||| ||||||||||| | ||    
T  21188030 aatctaaggtaagggtgggactaaccttttttaatcatgagtatataattttgagaaaggatttaattttgtagttgttgata-gttttgatgttataga 21188128  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  ||||| ||    || || ||||| ||||| |||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  ||| |||  ||    
T  21188129 agttaggtttaaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgt 21188228  T
Q  239 ttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||||||||||||||    
T  21188229 ttcctatcaaatttgggatttgggt 21188253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 263
Target Start/End: Original strand, 38056720 - 38056893
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgg-aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatg 188  Q
    ||||||| ||||||||||||||||||||  ||| |||||||||| ||| ||||||| || |||  |  ||||  |||    |||||||||||||| ||||    
T  38056720 tgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatg 38056818  T
Q  189 aactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    || |||| ||||||||||||| || ||||  || |||||||||||  |||||||||||||||||||| |||||||    
T  38056819 aattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggtttgggt 38056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 39061375 - 39061283
Alignment:
Q  40 atctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    ||||||| |||  |||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||    
T  39061375 atctaaggtaagagtgggactaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgata-gttttgatgtt 39061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 35895048 - 35894949
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||| ||||||| ||||| |||||| | | |||||||||||| || | ||||||||||||||||||| |||||||||||||| | ||||||| ||||    
T  35895048 tttgaaattaaaattgattgttgaaagaattggtaatccgatgaagtaaggtaataattggtgttcaggtggtggaataatcatatgaagagttttctat 35894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 254
Target Start/End: Original strand, 8276037 - 8276201
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgg-aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatg 188  Q
    ||||||| |||||||||||||||||||| |||  |||||||||| ||| ||||||| || |||  |  ||||  |||    |||||||||||||| ||||    
T  8276037 tgaaaaagggtttaaccttgtagttgttgatat-ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatg 8276135  T
Q  189 aactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgg 254  Q
    || |||| ||||||||||||| || ||||  || |||||||||||  |||||||||||||||||||    
T  8276136 aattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttgg 8276201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 22130176 - 22130244
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  22130176 gttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggt 22130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 28313250 - 28313182
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||| | |||||||    
T  28313250 gttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttgaggtttgggt 28313182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 46197871 - 46197967
Alignment:
Q  169 aaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||||| |||||| ||||| ||   ||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  46197871 aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 46197967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 297245 - 297189
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  297245 tgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 297189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19676805 - 19676733
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  19676805 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 19676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 22145763 - 22145891
Alignment:
Q  138 aattagggtttgaaactaaaatt-aattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    ||||| |||| |||| ||||||| |||||| ||| |||||| |||||| ||||| ||   ||||||||| |||||| ||||| || ||||||||||||||    
T  22145763 aattaaggttagaaattaaaattgaattgttgaaggagtaggtaatccaatgaattaaagtaataattgatgttcaagttgtagattaatcataggtaga 22145862  T
Q  237 gtttcctatcaaatttgggatttgggttg 265  Q
    |||| |||  ||||||||| || ||||||    
T  22145863 gttttctacaaaatttggggttagggttg 22145891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 40390156 - 40390112
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  40390156 ttgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 40390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 45574170 - 45574230
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  45574170 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20633589 - 20633651
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaac 63  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||||||| ||||||||||||    
T  20633589 tgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaac 20633651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 23194669 - 23194731
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||  |||||||    
T  23194669 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggt 23194731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 11808235 - 11808288
Alignment:
Q  100 tttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaac 153  Q
    ||||||||||||||||||||||||||||||||||   |||||||| ||||||||    
T  11808235 tttaaccttgtagttgttaataggttttgatgtttcagaattaggatttgaaac 11808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28476692 - 28476809
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatga-ctatgtaatcttgaaaaaagg 99  Q
    ||||||||||| |||||||||| |||||  | |||||||||||||| ||| ||||||||||   |||| |||| ||||  | | ||||  ||||||| ||    
T  28476692 tgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaaggg 28476791  T
Q  100 tttaaccttgtagttgtt 117  Q
    ||||||||||||||||||    
T  28476792 tttaaccttgtagttgtt 28476809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21046007 - 21046079
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    |||||||||||  |||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  21046007 tgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 21046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 13880687 - 13880745
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  13880687 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 50001363 - 50001306
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| |||| || |||||||||||||||||| ||||||||||||    
T  50001363 gttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttg 50001306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 29763809 - 29763852
Alignment:
Q  220 gaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||| |||| || |||||||||||||||||||||||||||||    
T  29763809 gaataaacataagttgagtttcctatcaaatttgggatttgggt 29763852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 12710959 - 12710901
Alignment:
Q  3 tgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||| ||||||||||||||||   ||||||||||||||| ||| | ||||||||    
T  12710959 tgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggacta 12710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 16058287 - 16058333
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaa 62  Q
    |||||||||||||  |||||||||||||||| ||| |||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaa 16058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20588732 - 20588675
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtggga 58  Q
    ||||||||||| ||||||||||||||||  ||||||| ||| |||| ||| |||||||    
T  20588732 tgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtggga 20588675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20593270 - 20593213
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtggga 58  Q
    ||||||||||| ||||||||||||||||  ||||||| ||| |||| ||| |||||||    
T  20593270 tgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtggga 20593213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 174315 - 174121
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||| ||||   ||| ||||  ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |||    
T  174315 tgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggt 174216  T
Q  101 ttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactagg 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  174215 ttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattagg 174121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 4485 - 4310
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||| |||||  ||||||||||||||||||||||||||||||||||||||||    
T  4485 gatcatctaacctaaggtaagggtgggactaaccttctttaatcataagtatataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgat 4386  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattgg 206  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||    
T  4385 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattgg 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 12135 - 12080
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| |||||||||||| ||||||||||||||   ||||||||||||||||||||    
T  12135 aattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggga 12080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 8885 - 8709
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| ||||||| |||||||||    
T  8885 gatcatctaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagatgttaatcggttttgat 8786  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggt 207  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| |||||||||    
T  8785 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggt 8709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 409 - 232
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| |||| || ||| ||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  409 gatcatctaacctaaggtaagggtgagattaatcttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgat 310  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  309 gttgtagaattagggtttgaaactaaaatttatagtagaaagagtagataatccgatgaattaggttgataattggtg 232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 62774 - 62605
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| | || |||||||||||||||||||| | ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| ||    
T  62774 aatctaaggtaaggatgagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtaga 62675  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  62674 attagggtttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 62605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 9119 - 8950
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||    
T  9119 aatctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtaga 9020  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| || |||||||||||| ||||| ||||||| |||||| ||||||||||    
T  9019 attagggtttgaaactaaaattgatcgtagaaagagtatataatgcgatgaattaggttgataattggtg 8950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 9916 - 10093
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| | ||||||||  ||||||| |||||| ||||||||||  ||||||||||||||    
T  9916 gatcatctaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaaaagggtttagccttgtagtttctaataggttttgat 10015  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||    
T  10016 gttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 10093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 33510 - 33341
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||| ||||| ||||||| ||||||| | |||||||||||||||||||||||||||| ||    
T  33510 aatctaaggtaagggtgggactaaccttctttaatcataagtatttaatcctgaaaaagggtttaaacgtgtagttgttaataggttttgatgttgtaga 33411  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  33410 attagggtttgaaactaaaattgattgttgaaatagtagataatccgatgaattaggttgataattggtg 33341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 57037 - 56863
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgat 130  Q
    |||||| ||| ||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||||| |   ||||||||||| |||||||||||||||||    
T  57037 gatcatataacctaaggtaagggtgggactaaccttctttaatcataagtatgtaatcctgaaaaagg---taaccttgtagatgttaataggttttgat 56941  T
Q  131 gttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtg 208  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  56940 gttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataattcgatgaattaggttgataattggtg 56863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 5727 - 5517
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgacta-tgtaatcttgaaaaaa-- 97  Q
    ||||||||||  ||||||||||||||||  ||||||||||| |||| ||| |||||||||| | |||| |||| |||  |  | ||||  ||||||||      
T  5727 tgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaag 5628  T
Q  98 ggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtt 197  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||    
T  5627 ggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatgaattaggtt 5528  T
Q  198 aataattggtg 208  Q
     ||||||||||    
T  5527 gataattggtg 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 2189 - 2075
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  2189 tttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctat 2090  T
Q  246 caaatttgggatttg 260  Q
    |||||||||||||||    
T  2089 caaatttgggatttg 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 20196 - 20092
Alignment:
Q  98 ggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtt 197  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||    
T  20196 ggtttaaccttgtagttgttaataggttttgatgttttagaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatgaattaggtt 20097  T
Q  198 aataa 202  Q
    |||||    
T  20096 aataa 20092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 681 - 571
Alignment:
Q  98 ggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtt 197  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||| ||||||||||||| ||||||    
T  681 ggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcatagaaagagtatataatccgatgaattaggtt 582  T
Q  198 aataattggtg 208  Q
     ||||||||||    
T  581 gataattggtg 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 6422 - 6303
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttga-tgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatg 188  Q
    ||||||| || |||| |||||||||||| ||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6422 tgaaaaagggattaatcttgtagttgtttataggtttttaatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatccgatg 6323  T
Q  189 aactaggttaataattggtg 208  Q
    || |||||| ||||||||||    
T  6322 aattaggttgataattggtg 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 66183 - 66300
Alignment:
Q  146 tttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 245  Q
    ||||||||||||||| ||| | |||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  66183 tttgaaactaaaattgatttt-gaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttt-ctat 66280  T
Q  246 caaatttgggatttgggttg 265  Q
    ||||||||||||||| ||||    
T  66281 caaatttgggatttgagttg 66300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 8798 - 8673
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||| ||||||| ||||| |||||||||| ||||| |||||| || | |||||||||||||||||||||  || |||||||||||||||    
T  8798 aattaggttttgaaattaaaattgattgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagag 8699  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||| ||||||||||||||||||||||    
T  8698 ttttctatcaaatttgggatttgggt 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 2771 - 2649
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||||||||||| ||||||| ||||| |||||||||| ||||| |||||| || | ||||||||||||||||| |||| ||||||||||| ||  ||    
T  2771 aattagggtttgaaattaaaattgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaag 2672  T
Q  238 tttcctatcaaatttgggatttg 260  Q
    |||||||||||||||||||||||    
T  2671 tttcctatcaaatttgggatttg 2649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 2960 - 2858
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcat-gactatgtaatcttgaaaaaaggtttaaccttgtagtt 114  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||| | |||| |||| || |  | | ||||  ||||||| |||||||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagtt 2861  T
Q  115 gtt 117  Q
    |||    
T  2860 gtt 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 28645 - 28384
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggt 100  Q
    ||||||||||| ||||||||||||||||   ||||||||||||||| |||  ||||||||||||||| |||||||||| ||| ||||  ||||||| |||    
T  28645 tgtgagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaaccttccttaatcatgagtatataattctgaaaaagggt 28546  T
Q  101 ttaacc-ttgtagttgttaataggttttgatgttgtgga-attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggtta 198  Q
    |||||| |||||||||||  || ||||| ||||| | || |||||||||  | | | || ||||||||  ||||||||| |||||| || || |||  ||    
T  28545 ttaacctttgtagttgttgtta-gtttttatgttatagagattagggtt--agattgaatttaattgttaaaagagtaggtaatccaattaattagtgta 28449  T
Q  199 ataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
      ||||| || ||||||||| |||||| |||||| ||||||| |||| ||||| |||||||||||    
T  28448 caaattgatggtcaggttgtagaataaacataggaagagttttctataaaattagggatttgggt 28384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 1201 - 1259
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  1201 gttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 343 - 459
Alignment:
Q  92 aaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaac 191  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  ||||| |||| |||||||||||| ||  || ||||| ||||||||||||||||     
T  343 aaaaagggtttaacattgtagttgttaataggttttgatgttgtaaaattaaggttggaaactaaaattgatcataaaaagattagataatccgatgaat 442  T
Q  192 taggttaataattggtg 208  Q
    |||||| ||||||||||    
T  443 taggttgataattggtg 459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 6599 - 6724
Alignment:
Q  138 aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    ||||||| ||||||| ||||||| ||||| |||||||||| ||||  |||||| || | |||||||| ||||||| ||||| || |||||||| ||||||    
T  6599 aattaggttttgaaattaaaattgattgttgaaagagtaggtaattagatgaattaaggtaataattcgtgttcatgttgtagagtaatcataagtagag 6698  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    ||| ||||||||||||||||||||||    
T  6699 ttttctatcaaatttgggatttgggt 6724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 39 - 263
Target Start/End: Original strand, 38438 - 38662
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||| ||||  ||||||| |||||||  ||||||||||||||| ||||||||||| | ||    
T  38438 aatctaaggtaagggtgtgactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttataga 38536  T
Q  139 attagggtttgaaacta-aaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagag 237  Q
    | |  ||||| ||| || || || ||||| ||||| |||| |||||| ||||| ||   | | ||||| |||||||||||||||||||  |||||||  |    
T  38537 agttaggttttaaattacaatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataacaataggtaatg 38636  T
Q  238 tttcctatcaaatttgggatttgggt 263  Q
    |||| | ||||||||| |||||||||    
T  38637 tttcttgtcaaatttgagatttgggt 38662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 22055 - 21954
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||| ||||| |||||| || | ||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  22055 attgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgg 21956  T
Q  262 gt 263  Q
    ||    
T  21955 gt 21954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 169408 - 169328
Alignment:
Q  127 tgatgttgtggaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggt 207  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| |||||||||    
T  169408 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggt 169328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 262
Target Start/End: Complemental strand, 17163 - 16940
Alignment:
Q  37 ctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtg 136  Q
    |||||||||| ||| |||||||| || ||||||||||||||| ||| ||||  | ||||| |||||||| ||||||||||| ||||  |||||| || |     
T  17163 ctaatctaaggtaagggtgggacgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag--tttgatattata 17066  T
Q  137 gaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    ||| |  ||||| |     || || ||||| |||||||||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  ||||  |      
T  17065 gaaattaggtttaatttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatagaaaat 16966  T
Q  237 gtttcctatcaaatttgggatttggg 262  Q
    |||||||| |||||||||||||||||    
T  16965 gtttcctaccaaatttgggatttggg 16940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 262
Target Start/End: Complemental strand, 26694 - 26471
Alignment:
Q  37 ctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtg 136  Q
    |||||||||| ||| |||||||| || ||||||||||||||| ||| ||||  | ||||| |||||||| ||||||||||| ||||  |||||| || |     
T  26694 ctaatctaaggtaagggtgggacgaatcttctttaatcatgagtatataattcttaaaaagggtttaactttgtagttgttgatag--tttgatattata 26597  T
Q  137 gaattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    ||| |  ||||| |     || || ||||| |||||||||| |||||| ||||| ||   ||| ||||| |||||||||||| ||||||  ||||  |      
T  26596 gaaattaggtttaatttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatagaaaat 26497  T
Q  237 gtttcctatcaaatttgggatttggg 262  Q
    |||||||| |||||||||||||||||    
T  26496 gtttcctaccaaatttgggatttggg 26471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 18613 - 18862
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatc---ttgaaaaaaggtttaaccttgtag 112  Q
    |||||||||||||  |||||||||||||||| ||| |||||||||| | |||| |||| |||| | ||||||    ||||||||||||||||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagt-tgtaataattttgaaaaaaggtttaaccttgtag 18711  T
Q  113 ttgttaataggttttgatgttgtgg-aattagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttc 211  Q
    |||||  ||| |||||||||| ||| ||||||| || |||  |  ||||  |||    |||| ||||||||| |||||| |||| ||||||||||||| |    
T  18712 ttgttgttag-ttttgatgttttgggaattaggtttagaagttgtaattggttgatttaagactagataatctgatgaattagggtaataattggtgtcc 18810  T
Q  212 aggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    | ||||  || | |||||||||  |||||||||||||||||| | |||||||    
T  18811 aagttgcagatttatcataggttaagtttcctatcaaatttgtggtttgggt 18862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 21473 - 21372
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| |||||||||| ||||| |||||| || | |||||||||||||||||||||| |||||||||||| |  ||||| ||||||||||||||||||||    
T  21473 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgg 21374  T
Q  262 gt 263  Q
    ||    
T  21373 gt 21372  T

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Target: scaffold0337 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 259
Target Start/End: Complemental strand, 3260 - 3041
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| ||||  ||||||| |||||||  ||||||||||| ||| ||||||||||| | ||    
T  3260 aatctaaggtaagggtgggactaaccttctttaatcatgagtatataattatgaaaaagggtttaattttgtagttgttgata-gttttgatgttataga 3162  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagt 238  Q
    | |  ||||| ||    || |||||||| ||||| |||| |||| | ||||| |||  ||| ||||| ||||| |||| | ||||||| ||||| |  ||    
T  3161 agttaggtttaaattgcaatttaattgttgaaagtgtaggtaattcaatgaattagtataaaaattgatgttctggttttagaataataataggcaatgt 3062  T
Q  239 ttcctatcaaatttgggattt 259  Q
    ||| |||||||||||||||||    
T  3061 ttcttatcaaatttgggattt 3041  T

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Target: scaffold0217 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 28769 - 28546
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgt-gg 137  Q
    |||||||| |||  |||||||||||||||||||||||| | ||| ||||  |||||||  |||||| |||||||||||||||| |||||  |||| | ||    
T  28769 aatctaaggtaagagtgggactaaccttctttaatcataagtatataattctgaaaaagcgtttaatcttgtagttgttaata-gttttattgttatagg 28671  T
Q  138 aattagggtttgaaact-aaaattaattgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtaga 236  Q
    ||||||||||  ||| | ||| || ||||| ||||| |||| |||||  ||||| ||   ||| ||||| |||||||||||| ||||||| ||| |||      
T  28670 aattagggtt--aaattgaaatttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataatacgtaat 28573  T
Q  237 gtttcctatcaaatttgggatttgggt 263  Q
    ||||||| |||||||||||||||||||    
T  28572 gtttcctgtcaaatttgggatttgggt 28546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 1029 - 965
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttggagaaa 271  Q
    |||||||||||| | ||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  1029 tgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggttggtgaaa 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 9996 - 9928
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||    
T  9996 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggt 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 39963 - 40031
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||    
T  39963 gttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggt 40031  T

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Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 59652 - 59735
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaatag 122  Q
    |||||||| ||| |||||| |||||||||||||||||||| ||| ||||  ||||||| |||||||| ||||||||||| ||||    
T  59652 aatctaaggtaagggtgggtctaaccttctttaatcatgagtatataattctgaaaaagggtttaactttgtagttgttgatag 59735  T

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Target: scaffold0046 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 21935 - 21999
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  21935 aattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 21999  T

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Target: scaffold0200 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 18495 - 18425
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||  ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  18495 gttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 18425  T

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Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 23669 - 23576
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||| ||||||||| ||||||||||||||||| ||| ||||  | ||||| |||||||  ||||||||||||||| |||||||||||    
T  23669 aatctaaggtaagggtgggactgaccttctttaatcatgagtatataattctaaaaaagggtttaattttgtagttgttaata-gttttgatgtt 23576  T

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Target: scaffold0220 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 13873 - 13780
Alignment:
Q  170 aagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||||| |||||| | || |||||||||||||  | ||||  || |||||||||||  |||||||||||||||||||| |||||||    
T  13873 aagagtagataatctgatgaattggggtaataattggtgtcaaagttgcagattaatcataggttaagtttcctatcaaatttggggtttgggt 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 19301 - 19169
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaatcatga-ctatgtaatcttgaaaaaagg 99  Q
    ||||||||||| ||||||||||||||||  ||| |||||||||||  ||| |||||||||||| |||| ||||  | |  | | ||||  ||||||| ||    
T  19301 tgtgagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggg 19202  T
Q  100 tttaaccttgtagttgttaataggttttgatgtt 133  Q
    ||||||||||||||||||| || |||||||||||    
T  19201 tttaaccttgtagttgttatta-gttttgatgtt 19169  T

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Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 20984 - 20927
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  20984 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 20927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 21885 - 21816
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggtt 264  Q
    ||||| ||||| |||||||||||| |||||||||||| |  || ||||||||||||||||||||||||||    
T  21885 gttaacaattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggtt 21816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21751 - 21812
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaa 62  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||||||||    
T  21751 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaa 21812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 29381 - 29438
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  29381 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttg 29438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 426 - 498
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| | |||||||||||||| |||||||||||| |||| ||| |||||||||||| |||| ||||    
T  426 tgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaat 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 3853 - 3797
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  3853 tgttcaggttgttgaataaacataggttgagtttcctatcaaatttggggtttgggt 3797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 2026 - 1958
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| |||| ||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  2026 gttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggt 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 8130 - 8086
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  8130 ttgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 29317 - 29273
Alignment:
Q  89 ttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  29317 ttgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 29273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 79143 - 79071
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  79143 tgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaat 79071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 78143 - 78215
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  78143 tgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaat 78215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24089 - 24161
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  24089 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 24161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 16467 - 16609
Alignment:
Q  90 tgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt--gtggaattagggtttgaaactaaaattaatt-gtagaaagagtagataatccga 186  Q
    ||||||| ||||||||||||||||||||  ||||||| |||| |  | | |||||||||| || | ||||||| ||| || |||||||||| ||||  ||    
T  16467 tgaaaaagggtttaaccttgtagttgttgttaggttt-gatgattagagaaattagggttagagattaaaattgatttgttgaaagagtaggtaatatga 16565  T
Q  187 tgaactaggttaataattggtgttcaggttgtggaataatcata 230  Q
    |||| |||| |||||||||||||| ||||||  |||||||||||    
T  16566 tgaattagggtaataattggtgtttaggttgcagaataatcata 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 18979 - 19073
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||| |||||| ||||||||   ||| ||| | |||||||||||| ||||||  ||||||   ||||||||||||||||||||    
T  18979 attgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 19073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 77781 - 77709
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||| ||||||| |||| ||||    
T  77781 tgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaat 77709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 169341 - 169273
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||  ||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  169341 gttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 169273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 176694 - 176626
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||  ||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||    
T  176694 gttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggt 176626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32088 - 32016
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  32088 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaat 32016  T

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Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37395 - 37323
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| |||| ||||||| |||| ||||    
T  37395 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaat 37323  T

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Target: scaffold0364 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 8064 - 8005
Alignment:
Q  196 ttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    |||| ||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  8064 ttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

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Target: scaffold0061 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 14751 - 14806
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  14751 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 14806  T

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Target: scaffold0061; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 23809 - 23864
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  23809 gttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 23864  T

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Target: scaffold1102 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 1947 - 2029
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaata 121  Q
    |||||||| ||| ||||||||||||||||||||||||||| | | ||||  ||||||| |||||||  |||| ||||||||||    
T  1947 aatctaaggtaacggtgggactaaccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata 2029  T

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Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 2246 - 2312
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgg 261  Q
    ||||| ||||| |||||||||||| ||||||||| ||||  ||||||||||||||||||| ||||||    
T  2246 gttaagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttggcatttgg 2312  T

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Target: scaffold0956; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2649 - 2577
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |||||||| ||||||   |||||||||||||| | ||| |||||||||||| |||| ||||    
T  2649 tgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaat 2577  T

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Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 31987 - 31890
Alignment:
Q  37 ctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgt 135  Q
    |||||||||| ||| |||| |||||||| ||||||||||||| ||| | ||  ||||||| |||||||  || |||||||||||| |||||||||||||    
T  31987 ctaatctaaggtaagggtgagactaaccatctttaatcatgagtatatgattctgaaaaagggtttaattttatagttgttaata-gttttgatgttgt 31890  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 35652 - 35706
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggt 35706  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 1824 - 1767
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  1824 gttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttg 1767  T

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Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 32031 - 31975
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  32031 gttcaggctgtagaataa-cataggttgagtttcctatcaaatttgggatttgggttg 31975  T

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Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 181 - 38
Alignment:
Q  41 tctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtggaa- 139  Q
    |||||| ||| ||||||||||||||||||||||||| | ||| |  |  ||||||| ||||| |  ||||||||||||||| ||||||||||| | |||     
T  181 tctaaggtaagggtgggactaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaata-gttttgatgttatagaag 83  T
Q  140 ttagggtttgaaactaaaattaattgtagaaagagtagataatcc 184  Q
    ||||||||  ||   |||||| ||||| |||||||||| ||||||    
T  82 ttagggttaaaattgaaaattgattgttgaaagagtaggtaatcc 38  T

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Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4672 - 4744
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||| ||| ||| |||||||| |||| ||||    
T  4672 tgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaat 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 7173 - 7229
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||| ||| |||||| ||||||| ||||||||||||||||||||| |||||||    
T  7173 tgttcaggctgtagaataaacataggttgagtttcctatcaaatttggggtttgggt 7229  T

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Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 35386 - 35322
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||| |||||||||||| |||||| ||||||| |||||||||||  |||||||||||| |||||    
T  35386 aattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggatttaggttg 35322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34433 - 34361
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |||||| |||||||||  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  34433 tgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaat 34361  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 8992 - 8932
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggg 255  Q
    ||||| ||||| |||||||||||| ||||||||||| ||  ||||||||||||||||||||    
T  8992 gttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 8932  T

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Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 58840 - 58768
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| ||||||||||||||||  ||||||||||  |||| ||| |||||||||||| |||| ||||    
T  58840 tgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaat 58768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 69979 - 70075
Alignment:
Q  169 aaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||||| |||||| ||||| ||   ||| |||||  ||||||| ||| ||| ||  |||||| |||||||||||||||||||||||||||||||    
T  69979 aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttg 70075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 72338 - 72277
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  72338 gttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 72277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 174259 - 174327
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| ||||| || ||||||||| ||||||||||| ||  |||||||||||||||||| |||||||||    
T  174259 gttaagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagatttgggt 174327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 6408 - 6494
Alignment:
Q  31 gatcatctaatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaacc-ttgtagttgtt 117  Q
    |||||||||| ||||| ||| |||||||||||||||| |||||||| | |||||||| |  ||||| ||||||||| |||||||||||    
T  6408 gatcatctaacctaaggtaagggtgggactaaccttcattaatcataagtatgtaat-tctaaaaagggtttaacctttgtagttgtt 6494  T

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Target: scaffold0256 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 1971 - 2042
Alignment:
Q  173 agtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttccta 244  Q
    ||||||||||| |||||| || | |||||| ||||||||| ||||| ||||||||||||||  |||||||||    
T  1971 agtagataatctgatgaattaaggtaataagtggtgttcatgttgtagaataatcataggttaagtttccta 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 7510 - 7603
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||| |||||||||||||||||||||| |||| ||| | ||  ||||||| |||||||  || |||||||| ||| |||||||||||    
T  7510 aatctaaggtaagggtgggactaaccttctttaattatgagtatatgattctgaaaaagggtttaattttatagttgttgata-gttttgatgtt 7603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 12951 - 12890
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||| ||||| ||||||||||||||  ||||| ||| |||||||||||    
T  12951 gttaagaattgatgttcatgttgtagaataatcataggttaagttttctaacaaatttggga 12890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 5774 - 5836
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||||||||||| |||||| ||||||| |||||||| ||  ||||||||||||||||    
T  5774 aattgatgttcaggttgtagaataaacataggttgagtttcccattgaatttgggatttgggt 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 106280 - 106374
Alignment:
Q  162 attgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||||| || ||||  |||||| || | ||||||||  ||||||||||||  ||||||| |||||  |||||||||||||||||||||    
T  106280 attgttgaaagagaaggtaatttgatgaattaaggtaataattattgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttggga 106374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 43945 - 44007
Alignment:
Q  201 aattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    ||||| |||| ||||||| |||||| ||||||| |||||||||||  ||||||||||||||||    
T  43945 aattgatgtttaggttgtagaataaacataggttgagtttcctattgaatttgggatttgggt 44007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 39259 - 39315
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||||| || ||| ||||||| || ||||||||  ||||||||||||||||    
T  39259 tgttcaggttgtagattaaacataggttgaatttcctattgaatttgggatttgggt 39315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 977 - 916
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttggga 256  Q
    ||||| ||||| |||||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  977 gttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 8847 - 8790
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||||||| |||||| ||||    
T  8847 gttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttg 8790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 117362 - 117293
Alignment:
Q  164 tgtagaaagagtagataatccgatgaactaggttaataattggtgttcaggttgtggaataatcataggt 233  Q
    |||||||||||||||||||| |||||| ||   |||||  ||||||||| ||||| ||||||||||||||    
T  117362 tgtagaaagagtagataatctgatgaattaaagtaataggtggtgttcaagttgtagaataatcataggt 117293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 256
Target Start/End: Complemental strand, 663 - 445
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactatgtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtgga 138  Q
    |||||||| ||| ||||||||||||||||||||||||||| | | ||||  | ||||| |||||||  |||| |||||| |||  |||||||||| | ||    
T  663 aatctaaggtaagggtgggactaaccttctttaatcatgagtctataattcttaaaaatggtttaattttgttgttgttgata-attttgatgttataga 565  T
Q  139 attagggtttgaaactaaaattaattgtagaaagagtagataatccgatgaactaggttaat--aattggtgttcaggttgtggaataatcataggtaga 236  Q
    | |  ||||||||    || || ||||| ||||| |||| |||| | ||||| ||   ||||  ||||| ||||| |||||| ||||||  |||||||      
T  564 agttaggtttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaataggtaat 465  T
Q  237 gtttcctatcaaatttggga 256  Q
    |||| |||||||||||||||    
T  464 gttttctatcaaatttggga 445  T

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Target: scaffold1633 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1299 - 1227
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |||||| ||||||| |  ||||||||||| |||| ||| |||||||||||| |||| ||||    
T  1299 tgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaat 1227  T

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Target: scaffold0395 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11983 - 11919
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaacct 65  Q
    ||||||||||| ||||||||||||||||| ||||   ||| ||||||||| |||| |||||||||    
T  11983 tgtgagaagaggagcaatcttgtagagttcgatcgattaacctaagataagggtgagactaacct 11919  T

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Target: scaffold0379 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11041 - 10981
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggacta 61  Q
    ||||||||||| |||||||||||||| | |||||||||||| |||| ||| ||||| ||||    
T  11041 tgtgagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaacta 10981  T

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Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 40157 - 40253
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatgactat---gtaatcttgaaaaaaggtttaaccttgtagttgttaataggttttgatgtt 133  Q
    |||||||| ||| ||||||||||||||||| ||||||||| |||    ||||  | ||||| ||||||||| |||||||||| ||| |||||||||||    
T  40157 aatctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaaccatgtagttgttgata-gttttgatgtt 40253  T

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Target: scaffold0059 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 49785 - 49746
Alignment:
Q  39 aatctaagataatggtgggactaaccttctttaatcatga 78  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  49785 aatctaaggtaagggtgggactaaccttctttaatcatga 49746  T

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Target: scaffold0877 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 2190 - 2236
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  2190 tgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 2236  T

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Target: scaffold0462 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 1156 - 1102
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| |||||||||||  |  ||||||||||||||||| ||||||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggt 1102  T

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Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 6662 - 6608
Alignment:
Q  209 ttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggt 263  Q
    |||||||||| |||||||||||  |  ||||||||||||||||| ||||||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggt 6608  T

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Target: scaffold0462; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 11110 - 11053
Alignment:
Q  208 gttcaggttgtggaataatcataggtagagtttcctatcaaatttgggatttgggttg 265  Q
    ||||||| ||| |||||| ||||  | ||||||||||||||||||||||||| |||||    
T  11110 gttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttg 11053  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 19450 - 19512
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggat 257  Q
    ||||| |||||  ||||||| ||| |||||| |||| || |||||||||||||||||||||||    
T  19450 gttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgggat 19512  T

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Target: scaffold0290 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 962 - 916
Alignment:
Q  207 tgttcaggttgtggaataatcataggtagagtttcctatcaaatttg 253  Q
    |||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  962 tgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 916  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13510 - 13572
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaac 63  Q
    ||||||||||| |  |||||||||||||  ||||||||||| |||| ||| ||||||||||||    
T  13510 tgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2032 - 1966
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttc 67  Q
    ||||||||||| ||||||||||||||||| ||||   ||  ||||| ||| ||||||||||||||||    
T  2032 tgtgagaagaggagcaatcttgtagagttcgatcgattatgctaaggtaagggtgggactaaccttc 1966  T

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Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 5326 - 5289
Alignment:
Q  136 ggaattagggtttgaaactaaaattaattgtagaaaga 173  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  5326 ggaattagggtttgaaactaaaattgattgtaggaaga 5289  T

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Target: scaffold0203 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17913 - 17970
Alignment:
Q  16 aatcttgtagagtttgatcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||||||||| |  |||||||||||||||| ||| |||||||||||| |||| ||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaat 17970  T

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Target: scaffold1434 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 1349 - 1389
Alignment:
Q  33 tcatctaatctaagataatggtgggactaaccttctttaat 73  Q
    ||||| |||||||| ||| ||||||||||||||||||||||    
T  1349 tcatccaatctaaggtaagggtgggactaaccttctttaat 1389  T

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Target: scaffold0162 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23850 - 23890
Alignment:
Q  1 tgtgagaagagaagcaatcttgtagagtttgatcatctaat 41  Q
    ||||||||||| ||||||||||||||||  |||||||||||    
T  23850 tgtgagaagaggagcaatcttgtagagtccgatcatctaat 23890  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 42573 - 42509
Alignment:
Q  195 gttaataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgggattt 259  Q
    ||||| |||||  ||||||| ||| |||||| | ||||| |||||||||||||||||||| ||||    
T  42573 gttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattt 42509  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 127302 - 127361
Alignment:
Q  4 gagaagagaagcaatcttgtagagtttg--atcatctaatctaagataatggtgggacta 61  Q
    |||||||| ||||| |||||||||| ||  ||||||||||||||| ||| ||||||||||    
T  127302 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggacta 127361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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