View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9476_low_19 (Length: 203)

Name: NF9476_low_19
Description: NF9476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9476_low_19
NF9476_low_19
[»] chr2 (5 HSPs)
chr2 (4-198)||(1173284-1173476)
chr2 (45-193)||(1173382-1173528)
chr2 (12-93)||(38584094-38584176)
chr2 (15-82)||(1173522-1173589)
chr2 (144-198)||(1173470-1173524)
[»] chr7 (11 HSPs)
chr7 (5-179)||(15623012-15623184)
chr7 (7-188)||(15623096-15623275)
chr7 (4-198)||(44338368-44338559)
chr7 (13-187)||(44338285-44338456)
chr7 (4-114)||(44338460-44338568)
chr7 (3-87)||(15623009-15623093)
chr7 (69-188)||(15623189-15623306)
chr7 (12-88)||(11828572-11828649)
chr7 (118-177)||(21813827-21813887)
chr7 (20-82)||(21813824-21813887)
chr7 (118-187)||(46963810-46963879)
[»] chr6 (8 HSPs)
chr6 (10-188)||(21862139-21862319)
chr6 (1-144)||(21862227-21862369)
chr6 (12-189)||(21862048-21862223)
chr6 (25-198)||(28063530-28063699)
chr6 (4-93)||(28063540-28063629)
chr6 (7-142)||(13167477-13167611)
chr6 (1-48)||(13167565-13167612)
chr6 (12-188)||(13167391-13167564)
[»] chr3 (6 HSPs)
chr3 (12-179)||(46691971-46692137)
chr3 (4-88)||(46691967-46692052)
chr3 (107-198)||(46692046-46692137)
chr3 (4-92)||(42530725-42530813)
chr3 (92-187)||(42530718-42530813)
chr3 (18-98)||(50295591-50295672)
[»] chr1 (3 HSPs)
chr1 (20-187)||(15629942-15630107)
chr1 (4-92)||(15629942-15630030)
chr1 (12-77)||(19825091-19825157)
[»] chr8 (5 HSPs)
chr8 (4-198)||(20242045-20242236)
chr8 (13-187)||(20241962-20242133)
chr8 (13-187)||(20250934-20251105)
chr8 (4-114)||(20242137-20242245)
chr8 (4-114)||(20250915-20251022)
[»] chr5 (10 HSPs)
chr5 (44-192)||(24136983-24137127)
chr5 (4-98)||(24137035-24137128)
chr5 (4-144)||(24136880-24137018)
chr5 (96-179)||(24136877-24136961)
chr5 (1-40)||(24136970-24137009)
chr5 (45-93)||(11335382-11335430)
chr5 (144-198)||(11335372-11335426)
chr5 (15-82)||(9511777-9511845)
chr5 (118-177)||(9511785-9511845)
chr5 (18-93)||(9511811-9511887)
[»] chr4 (7 HSPs)
chr4 (6-92)||(16870739-16870825)
chr4 (13-187)||(16870652-16870825)
chr4 (19-86)||(54147717-54147785)
chr4 (118-179)||(54147721-54147783)
chr4 (46-92)||(54147869-54147915)
chr4 (50-144)||(54147811-54147902)
chr4 (144-187)||(54147872-54147915)


Alignment Details
Target: chr2 (Bit Score: 124; Significance: 5e-64; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 1173476 - 1173284
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgatt 103  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  || || |||||||||||||||||||||||  ||||||||    
T  1173476 tgattcttcaatttggttgtttggtgagtctaattctcacatttggttgtttggtgagtctagtgcacacaatttggtttcttctccccc--ttttgatt 1173379  T
Q  104 attcaatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    ||||||||||| | |||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||| |||||||| |||| ||||    
T  1173378 attcaatttggttgtttggtgagtctagttctcacatttgattgtttagtgagtcgagtgctcacaatttggtttcttctcccccttttgattct 1173284  T

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Target: chr2; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 1173528 - 1173382
Alignment:
Q  45 tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatttggatatttggtgagtctagttctcacattttg 144  Q
    ||||||||||||||||||  || |||||||||||||||||||||| |||  |||||||| |||||||||| | ||||||||||||| ||||||||||| |    
T  1173528 tttggttgtttggtgagtctagtgctcacaatttggtttcttctcgccc--ttttgattcttcaatttggttgtttggtgagtctaattctcacatttgg 1173431  T
Q  145 ttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttg 193  Q
    |||||||||||| | ||||| |||||||||||||| |||||||| ||||    
T  1173430 ttgtttggtgagtctagtgcacacaatttggtttcttctcccccttttg 1173382  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 38584176 - 38584094
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctccccc 93  Q
    ||||||||| |||||||||||  ||| || ||| ||||||||||||||||||| |  |||||||||||| ||| |||||||||    
T  38584176 caatttggtagtttggtgagttaagtgctcacaatttggttgtttggtgagttaaatgctcacaatttgattttttctccccc 38584094  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 1173589 - 1173522
Alignment:
Q  15 tttggttgtttggtgagtctagttcttacat-ttggttgtttggtgagttgagcgctcacaatttggtt 82  Q
    ||||||||||||||||||||||| || |||| ||| |||||||||||| | |||||||||| |||||||    
T  1173589 tttggttgtttggtgagtctagtgctcacatgttgtttgtttggtgag-taagcgctcacactttggtt 1173522  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 1173524 - 1173470
Alignment:
Q  144 gttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    ||||||||||||| | |||||||||||||||||||| |||| ||| |||| ||||    
T  1173524 gttgtttggtgagtctagtgctcacaatttggtttcttctcgcccttttgattct 1173470  T

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Target: chr7 (Bit Score: 112; Significance: 8e-57; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 15623184 - 15623012
Alignment:
Q  5 gattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgatta 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |  |||||     
T  15623184 gattcttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtgagttgagtgctcacaattttgtttcttctccccc--tactgattc 15623087  T
Q  105 ttcaatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttc 179  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||||||| || |||||||| ||| ||||||    
T  15623086 ttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtgagtcgtgtgctcacgattcggtttc 15623012  T

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Target: chr7; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 15623275 - 15623096
Alignment:
Q  7 ttcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattatt 106  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||  |   |||| ||    
T  15623275 ttcttcaatttggttgtttggtgagtctagttctcacatttgattgtttggtgagttgagtgctcacaattttgtttcttctccccc--taccgattctt 15623178  T
Q  107 caatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctccccc 188  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||| ||||||||    
T  15623177 caatttggttgtttggtgagtctagttctcacatttggttgtttggtgagttgagtgctcacaattttgtttcttctccccc 15623096  T

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Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 44338368 - 44338559
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgat 102  Q
    ||||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||  | | |||||||||||||||||||||||||   |||||||    
T  44338368 tgattcttcaatttggtggtttggtgagtcgagttctcacactttggttgtttggtgagc-gtgtgctcacaatttggtttcttctcccc---ttttgat 44338463  T
Q  103 tattcaatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    | |||||||||| | ||||||||||  ||||||||||||| ||||| |||||||  | ||||||||||||||||||| |||||||| |||| ||||    
T  44338464 tcttcaatttggttgtttggtgagtagagttctcacatttggttgtctggtgagtagtgtgctcacaatttggtttcttctcccccttttgattct 44338559  T

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Target: chr7; HSP #4
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 44338285 - 44338456
Alignment:
Q  13 aatttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatt 111  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||||  | | |||||||||||||||||||||||||   |||||||| |||||||    
T  44338285 aatttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagc-gtgtgctcacaatttggtttcttctcccc---ttttgattcttcaatt 44338380  T
Q  112 tggatatttggtgagtctagttctcaca-ttttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    |||   ||||||||||| |||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||    
T  44338381 tggtggtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc 44338456  T

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Target: chr7; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 44338460 - 44338568
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgatt 103  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||||  ||||||||    
T  44338460 tgattcttcaatttggttgtttggtgagtagagttctcacatttggttgtctggtgagtagtgtgctcacaatttggtttcttctccccc--ttttgatt 44338557  T
Q  104 attcaatttgg 114  Q
     ||||||||||    
T  44338558 cttcaatttgg 44338568  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 15623093 - 15623009
Alignment:
Q  3 ctgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttc 87  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | |||||| ||| |||||||||    
T  15623093 ctgattcttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtgagtcgtgtgctcacgattcggtttcttc 15623009  T

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Target: chr7; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 15623306 - 15623189
Alignment:
Q  69 ctcacaatttggtttcttctcccccctttttgattattcaatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcac 168  Q
    ||||||||||||||||||||||||   |  || || |||||||||| | |||||||||||||||||||||||||  ||||||||||||  ||||||||||    
T  15623306 ctcacaatttggtttcttctccccg--tactggttcttcaatttggttgtttggtgagtctagttctcacatttgattgtttggtgagttgagtgctcac 15623209  T
Q  169 aatttggtttcctctccccc 188  Q
    ||||| ||||| ||||||||    
T  15623208 aattttgtttcttctccccc 15623189  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 11828649 - 11828572
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttcttct 88  Q
    |||||||||||| |||||||||  || || |||||| |||||||||||||||| ||  ||||||||||||||||||||    
T  11828649 caatttggttgtctggtgagtcgggtgctcacattttggttgtttggtgagttaagtactcacaatttggtttcttct 11828572  T

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Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 21813827 - 21813887
Alignment:
Q  118 tttggtgagtctagttctcacattttg-ttgtttggtgagccgagtgctcacaatttggtt 177  Q
    ||||||||||| ||| |||||| |||| |||||||||||| ||||||||||||||||||||    
T  21813827 tttggtgagtcaagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggtt 21813887  T

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Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 21813824 - 21813887
Alignment:
Q  20 ttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtt 82  Q
    |||||||||||||| ||| || ||| |||||||||||||||||| ||| |||||||||||||||    
T  21813824 ttgtttggtgagtcaagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggtt 21813887  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 46963879 - 46963810
Alignment:
Q  118 tttggtgagtctagttctcacattttg-ttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    ||||||||||| | |||||||| |||| |||||||||||||   ||||||||||||||||||| |||||||    
T  46963879 tttggtgagtcgatttctcacactttggttgtttggtgagcat-gtgctcacaatttggtttcttctcccc 46963810  T

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Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 21862139 - 21862319
Alignment:
Q  10 ttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccct--ttttgattattc 107  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||  |||||||||| |||||||||   || ||||| |||    
T  21862139 ttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtgagtcgagtgctcaatatttggtttcctctcccccccccttctgattcttc 21862238  T
Q  108 aatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctccccc 188  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||    
T  21862239 aatttggttgtttggtgagtctagctctcacatttggttgtttggtgagtcgagtgctcacaatttggtttcttctccccc 21862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 21862227 - 21862369
Alignment:
Q  1 ttctgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttg 100  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  21862227 ttctgattcttcaatttggttgtttggtgagtctagctctcacatttggttgtttggtgagtcgagtgctcacaatttggtttcttct-cccccattttg 21862325  T
Q  101 attattcaatttggatatttggtgagtctagttctcacattttg 144  Q
    ||| |||||||||| | ||||||||||||| |||||||| ||||    
T  21862326 attcttcaatttggttgtttggtgagtctaattctcacactttg 21862369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 21862048 - 21862223
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgatta-ttcaa 109  Q
    ||||||| |||||||||||||| | |||| |||||| ||||||||| ||||  | | |||||||||||||||||||||||||   ||||||||  |||||    
T  21862048 caatttgcttgtttggtgagtcgaattctcacattttggttgtttgttgagc-gtgtgctcacaatttggtttcttctcccc---ttttgattcgttcaa 21862143  T
Q  110 tttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccc 189  Q
    ||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21862144 tttggttgtttggtgagtctagttctcacatttggttgtttggtgagtcgagtgctcaatatttggtttcctctcccccc 21862223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 28063699 - 28063530
Alignment:
Q  25 tggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatttggatatttggtg 124  Q
    ||||||| | ||| || ||| |||||||||||||||||   | ||||||||||||||||||||||||    |||||||| |||||||||| | |||||||    
T  28063699 tggtgagccgagtgctcacaattggttgtttggtgagtcaggtgctcacaatttggtttcttctccc----ttttgattcttcaatttggttgtttggtg 28063604  T
Q  125 agtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    |||||||||||||||||| |||||||||| ||  || | ||| ||||||| |||| || ||||| |||| ||||    
T  28063603 agtctagttctcacatttggttgtttggtaagttgaattctcccaatttgatttcttcacccccttttgattct 28063530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 28063629 - 28063540
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctccccc 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||   ||| ||||||| ||||||| |||||    
T  28063629 tgattcttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtaagttgaattctcccaatttgatttcttcaccccc 28063540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 13167477 - 13167611
Alignment:
Q  7 ttcttcaatttggttgtttggtgagtctagttcttacatttggttgttt-ggtgagttgagcgctcacaatttggtttcttctcccccctttttgattat 105  Q
    ||||||||||||||||| ||||||||  | |||| ||||||  |||||  ||||||| ||| ||||||| ||||||||||||||||||  || ||||| |    
T  13167477 ttcttcaatttggttgtgtggtgagtaaaattctcacatttcattgttccggtgagtcgagtgctcacagtttggtttcttctccccc--ttctgattct 13167574  T
Q  106 tcaatttggatatttggtgagtctagttctcacattt 142  Q
    ||||||||| | |||||||||||||||||| ||||||    
T  13167575 tcaatttggttgtttggtgagtctagttcttacattt 13167611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13167565 - 13167612
Alignment:
Q  1 ttctgattcttcaatttggttgtttggtgagtctagttcttacatttg 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13167565 ttctgattcttcaatttggttgtttggtgagtctagttcttacatttg 13167612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 13167391 - 13167564
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatt 111  Q
    ||||||| |||||||||||||| | |||| ||| || |||||||| ||||   |  |||||||||||||| ||||||||||   ||||| || |||||||    
T  13167391 caatttgcttgtttggtgagtcgaattctcacactttgttgtttgctgagcgtat-gctcacaatttggtgtcttctcccc---ttttggttcttcaatt 13167486  T
Q  112 tggatatttggtgagtctagttctcacattttgttgttt-ggtgagccgagtgctcacaatttggtttcctctccccc 188  Q
    ||| | | ||||||||  | |||||||||||  |||||  |||||| |||||||||||| ||||||||| ||||||||    
T  13167487 tggttgtgtggtgagtaaaattctcacatttcattgttccggtgagtcgagtgctcacagtttggtttcttctccccc 13167564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 46692137 - 46691971
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatt 111  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||| ||| |||||||||||||||||||||| |||  |||||||| |||||||    
T  46692137 caatttggttgtttggtgagtctaattctcacatttagttgtttggtgagtcgagtgctcacaatttggtttcttctctccc--ttttgattcttcaatt 46692040  T
Q  112 tggatatttggtgagtctagttctcacattttgttg-tttggtgagccgagtgctcacaatttggtttc 179  Q
    |||   ||||||||||||||||||||||||| |||| ||||||||| |||||| |||||||||||||||    
T  46692039 tggtggtttggtgagtctagttctcacatttggttgttttggtgagtcgagtgttcacaatttggtttc 46691971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 46692052 - 46691967
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttg-tttggtgagttgagcgctcacaatttggtttcttct 88  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||| | |||||||||||||||||||    
T  46692052 tgattcttcaatttggtggtttggtgagtctagttctcacatttggttgttttggtgagtcgagtgttcacaatttggtttcttct 46691967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 46692137 - 46692046
Alignment:
Q  107 caatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    |||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||| |||| ||||    
T  46692137 caatttggttgtttggtgagtctaattctcacatttagttgtttggtgagtcgagtgctcacaatttggtttcttctctcccttttgattct 46692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 42530725 - 42530813
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccc 92  Q
    |||||||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||  | | |||||||||||||||||||||||||    
T  42530725 tgattctttaatttggttgtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc 42530813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 42530718 - 42530813
Alignment:
Q  92 ccctttttgattattcaatttggatatttggtgagtctagttctcaca-ttttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    |||||||||||| || ||||||| | ||||||||||| |||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||    
T  42530718 ccctttttgattctttaatttggttgtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc 42530813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 50295591 - 50295672
Alignment:
Q  18 ggttgtttggtgagtctagttct--tacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttt 98  Q
    |||||||||||||||  ||||||  ||| |||| |||||||||||||| ||  |||| |||||||||||||||||||||||||    
T  50295591 ggttgtttggtgagttgagttctcgtac-tttgattgtttggtgagttaagtactcataatttggtttcttctcccccctttt 50295672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 15630107 - 15629942
Alignment:
Q  20 ttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatttggatat 118  Q
    |||||||||||||| ||| || ||| |||||||||||||||||| ||| |||||||||||||||||||||||||   |||||||| |||||||||| | |    
T  15630107 ttgtttggtgagtcgagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggtttcttctcccc---ttttgattcttcaatttggttgt 15630011  T
Q  119 ttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    || ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||    
T  15630010 ttagtgagtctaattctcacatttggttgtttggtgagtcgagtgctcacaatttggtttcttctcccc 15629942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 15630030 - 15629942
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccc 92  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  15630030 tgattcttcaatttggttgtttagtgagtctaattctcacatttggttgtttggtgagtcgagtgctcacaatttggtttcttctcccc 15629942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 19825157 - 19825091
Alignment:
Q  12 caatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatt 77  Q
    |||||||||||||||| ||||| ||| || ||| ||||||||||||||||||| || ||||||||||    
T  19825157 caatttggttgtttggcgagtcgagtgctcacaatttggttgtttggtgagttaagtgctcacaatt 19825091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 20242045 - 20242236
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgat 102  Q
    ||||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||  | | |||||||||||||||||||||||||   |||||||    
T  20242045 tgattcttcaatttggtggtttggtgagtcgagttctcacactttggttgtttggtgagc-gtgtgctcacaatttggtttcttctcccc---ttttgat 20242140  T
Q  103 tattcaatttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    | |||||||||| | ||||||||||  ||||||||||||| ||||| |||||||  | ||||||||||||||||||| |||||||| |||| ||||    
T  20242141 tcttcaatttggttgtttggtgagtagagttctcacatttggttgtctggtgagtagtgtgctcacaatttggtttcttctcccccttttgattct 20242236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 20241962 - 20242133
Alignment:
Q  13 aatttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatt 111  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||||  | | |||||||||||||||||||||||||   |||||||| |||||||    
T  20241962 aatttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagc-gtgtgctcacaatttggtttcttctcccc---ttttgattcttcaatt 20242057  T
Q  112 tggatatttggtgagtctagttctcaca-ttttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    |||   ||||||||||| |||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||    
T  20242058 tggtggtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc 20242133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 20251105 - 20250934
Alignment:
Q  13 aatttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatt 111  Q
    |||||| |||||||||||||| |||||| |||||| ||||||||||||||  | | |||||||||||||||||||||||||   |||||||| |||||||    
T  20251105 aatttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagc-gtgtgctcacaatttggtttcttctcccc---ttttgattcttcaatt 20251010  T
Q  112 tggatatttggtgagtctagttctcaca-ttttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    |||   ||||||||||| |||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||    
T  20251009 tggtggtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc 20250934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 20242137 - 20242245
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgatt 103  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||||  ||||||||    
T  20242137 tgattcttcaatttggttgtttggtgagtagagttctcacatttggttgtctggtgagtagtgtgctcacaatttggtttcttctccccc--ttttgatt 20242234  T
Q  104 attcaatttgg 114  Q
     ||||||||||    
T  20242235 cttcaatttgg 20242245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 20251022 - 20250915
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgat 102  Q
    ||||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||  | | |||||||||||||||||||||||||   |||||||    
T  20251022 tgattcttcaatttggtggtttggtgagtcgagttctcacactttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcccc---ttttgat 20250927  T
Q  103 tattcaatttgg 114  Q
    | ||||||||||    
T  20250926 tcttcaatttgg 20250915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 24136983 - 24137127
Alignment:
Q  44 atttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatttggatatttggtgagtctagttctcacatttt 143  Q
    |||||||||||||||||||  ||  |||||||||||||||||||||||||   ||||||| |||||||||| | |||||||||||||||||||||||||     
T  24136983 atttggttgtttggtgagtctagttctcacaatttggtttcttctccccc---tttgattcttcaatttggttgtttggtgagtctagttctcacatttg 24137079  T
Q  144 gttgtttggtgagccgagtgctcacaatttggtttcctctccccccttt 192  Q
    |||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  24137080 gttgtttggtgagttgagtgctcacaatttggttt-ttctccccccttt 24137127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 24137035 - 24137128
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttt 98  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  24137035 tgattcttcaatttggttgtttggtgagtctagttctcacatttggttgtttggtgagttgagtgctcacaatttggttt-ttctcccccctttt 24137128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 24136880 - 24137018
Alignment:
Q  4 tgattcttcaatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgat 102  Q
    |||||||||||||||||||||||||||| | | |||| ||| |||||||||||||||||| ||| ||||||||||| |||||||   ||||| || ||||    
T  24136880 tgattcttcaatttggttgtttggtgagccgacttctcacaatttggttgtttggtgagtcgagtgctcacaattttgtttctt---ccccccttctgat 24136976  T
Q  103 tattcaatttggatatttggtgagtctagttctcacattttg 144  Q
    | |||||||||| | |||||||||||||||||||||| ||||    
T  24136977 tcttcaatttggttgtttggtgagtctagttctcacaatttg 24137018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 24136877 - 24136961
Alignment:
Q  96 ttttgattattcaatttggatatttggtgagtctagttctcacattttg-ttgtttggtgagccgagtgctcacaatttggtttc 179  Q
    |||||||| |||||||||| | ||||||||| | | |||||||| |||| |||||||||||| |||||||||||||||| |||||    
T  24136877 ttttgattcttcaatttggttgtttggtgagccgacttctcacaatttggttgtttggtgagtcgagtgctcacaattttgtttc 24136961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24136970 - 24137009
Alignment:
Q  1 ttctgattcttcaatttggttgtttggtgagtctagttct 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24136970 ttctgattcttcaatttggttgtttggtgagtctagttct 24137009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 11335430 - 11335382
Alignment:
Q  45 tttggttgtttggtgagttgagcgctcacaatttggtttcttctccccc 93  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  11335430 tttggttgtttggtgagtcgaatgctcacaatttggtttcttctccccc 11335382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 11335426 - 11335372
Alignment:
Q  144 gttgtttggtgagccgagtgctcacaatttggtttcctctcccccctttgcttct 198  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||| |||| ||||    
T  11335426 gttgtttggtgagtcgaatgctcacaatttggtttcttctcccccttttgattct 11335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 9511777 - 9511845
Alignment:
Q  15 tttggttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtt 82  Q
    |||| |||||||||||||| ||| || ||| || ||||||||||||||| ||| |||||||||||||||    
T  9511777 tttgtttgtttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggtt 9511845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 9511785 - 9511845
Alignment:
Q  118 tttggtgagtctagttctcacattttg-ttgtttggtgagccgagtgctcacaatttggtt 177  Q
    ||||||||||| ||| |||||| || | |||||||||||| ||||||||||||||||||||    
T  9511785 tttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggtt 9511845  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 9511811 - 9511887
Alignment:
Q  18 ggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctccccc 93  Q
    |||||||||||||||| ||| || ||| ||||||||||||||||||| |   ||||||||||| |||||| ||||||    
T  9511811 ggttgtttggtgagtcgagtgctcacaatttggttgtttggtgagttaaatactcacaatttgatttcttatccccc 9511887  T

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Target: chr4 (Bit Score: 59; Significance: 3e-25; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 16870739 - 16870825
Alignment:
Q  6 attcttcaatttggttgtttggtgagtctagttcttacatttggttgtttggtgagttgagcgctcacaatttggtttcttctcccc 92  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||    
T  16870739 attcttcaatttggttgattagtgagtcaagttcttacatttggttgtttcgtgagtcgagtgctcataatttggtttcttctcccc 16870825  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 16870652 - 16870825
Alignment:
Q  13 aatttggttgtttggtgagtctagttcttaca-tttggttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgat--tattcaa 109  Q
    |||||| |||||||||||||| | |||| ||| |||||||||||||||||    | |||||||||||||||||||||||||   |||||||  | |||||    
T  16870652 aatttgcttgtttggtgagtcgatttctcacactttggttgtttggtgagcat-gtgctcacaatttggtttcttctcccc---ttttgatattcttcaa 16870747  T
Q  110 tttggatatttggtgagtctagttctcacattttgttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    ||||| |  || ||||||| |||||| |||||| ||||||| ||||| |||||||||| ||||||||||| |||||||    
T  16870748 tttggttgattagtgagtcaagttcttacatttggttgtttcgtgagtcgagtgctcataatttggtttcttctcccc 16870825  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 54147717 - 54147785
Alignment:
Q  19 gttgtttggtgagtctagttcttacattt-ggttgtttggtgagttgagcgctcacaatttggtttctt 86  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  | |||||||||||||||||||    
T  54147717 gttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttctt 54147785  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 54147721 - 54147783
Alignment:
Q  118 tttggtgagtctagttctcacatttt-gttgtttggtgagccgagtgctcacaatttggtttc 179  Q
    |||||||||||||||||||||||||| |||||||||||||    |||||||||||||||||||    
T  54147721 tttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttc 54147783  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 54147869 - 54147915
Alignment:
Q  46 ttggttgtttggtgagttgagcgctcacaatttggtttcttctcccc 92  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  54147869 ttggttgtttggtgagtcgagtgctcacaatttggtttcttctcccc 54147915  T

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Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 54147811 - 54147902
Alignment:
Q  50 ttgtttggtgagttgagcgctcacaatttggtttcttctcccccctttttgattattcaatttggatatttggtgagtctagttctcacattttg 144  Q
    |||||||||| || ||| ||||| |||||||||||||||||||   |||||||| ||||| |||| | ||||||||||| ||| |||||| ||||    
T  54147811 ttgtttggtgggtcgagtgctcataatttggtttcttctcccc---ttttgattcttcaagttggttgtttggtgagtcgagtgctcacaatttg 54147902  T

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Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 54147872 - 54147915
Alignment:
Q  144 gttgtttggtgagccgagtgctcacaatttggtttcctctcccc 187  Q
    ||||||||||||| |||||||||||||||||||||| |||||||    
T  54147872 gttgtttggtgagtcgagtgctcacaatttggtttcttctcccc 54147915  T

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