View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9479_low_6 (Length: 366)

Name: NF9479_low_6
Description: NF9479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9479_low_6
NF9479_low_6
[»] chr4 (87 HSPs)
chr4 (18-207)||(4169479-4169668)
chr4 (283-360)||(49425944-49426021)
chr4 (283-354)||(11786082-11786153)
chr4 (283-354)||(11798249-11798320)
chr4 (286-360)||(13635615-13635689)
chr4 (282-360)||(15051022-15051100)
chr4 (283-360)||(45256867-45256944)
chr4 (280-353)||(49492396-49492469)
chr4 (285-361)||(50644641-50644717)
chr4 (287-354)||(30597807-30597874)
chr4 (282-360)||(53441422-53441500)
chr4 (291-360)||(638966-639035)
chr4 (283-360)||(27865624-27865701)
chr4 (277-360)||(10473620-10473703)
chr4 (18-103)||(4175072-4175157)
chr4 (284-360)||(26577257-26577333)
chr4 (297-360)||(51921166-51921229)
chr4 (299-360)||(35291451-35291512)
chr4 (283-354)||(46672546-46672617)
chr4 (289-354)||(51836328-51836393)
chr4 (283-334)||(30358835-30358886)
chr4 (282-334)||(22180200-22180252)
chr4 (280-332)||(54895583-54895635)
chr4 (287-332)||(25715642-25715687)
chr4 (289-332)||(8165763-8165806)
chr4 (289-332)||(17109918-17109961)
chr4 (289-332)||(21995671-21995714)
chr4 (290-329)||(22181264-22181303)
chr4 (290-329)||(27764247-27764286)
chr4 (289-332)||(30779344-30779387)
chr4 (290-329)||(36621720-36621759)
chr4 (289-332)||(36924242-36924285)
chr4 (289-332)||(37059712-37059755)
chr4 (290-329)||(45255982-45256021)
chr4 (290-329)||(50643750-50643789)
chr4 (289-332)||(53865243-53865286)
chr4 (289-331)||(1492673-1492715)
chr4 (289-331)||(33819692-33819734)
chr4 (283-332)||(1728620-1728669)
chr4 (289-330)||(2124345-2124386)
chr4 (289-330)||(6841822-6841863)
chr4 (290-331)||(8157290-8157331)
chr4 (289-330)||(31763110-31763151)
chr4 (291-332)||(36309419-36309460)
chr4 (297-334)||(48076921-48076958)
chr4 (283-328)||(50070714-50070759)
chr4 (283-328)||(55782641-55782686)
chr4 (283-328)||(55846821-55846866)
chr4 (318-354)||(1621984-1622020)
chr4 (284-328)||(14499247-14499291)
chr4 (283-331)||(21098133-21098181)
chr4 (293-329)||(26447431-26447467)
chr4 (310-354)||(36011951-36011995)
chr4 (289-332)||(2124545-2124588)
chr4 (289-332)||(12722938-12722981)
chr4 (289-332)||(17109720-17109763)
chr4 (289-332)||(25715727-25715770)
chr4 (289-332)||(43374448-43374491)
chr4 (292-331)||(51076901-51076940)
chr4 (289-332)||(54895405-54895448)
chr4 (308-347)||(55765596-55765635)
chr4 (290-328)||(29826626-29826664)
chr4 (290-332)||(33883483-33883525)
chr4 (289-331)||(36309618-36309660)
chr4 (289-330)||(562776-562817)
chr4 (289-330)||(9813147-9813188)
chr4 (289-330)||(31762930-31762971)
chr4 (289-330)||(33883295-33883336)
chr4 (289-330)||(38010712-38010753)
chr4 (289-330)||(43375523-43375564)
chr4 (297-334)||(50562679-50562716)
chr4 (289-332)||(12722738-12722782)
chr4 (297-329)||(48077864-48077896)
chr4 (289-332)||(16475020-16475063)
chr4 (321-360)||(38245890-38245929)
chr4 (292-331)||(42788676-42788715)
chr4 (289-332)||(47567897-47567940)
chr4 (289-331)||(4169429-4169471)
chr4 (290-328)||(29825716-29825754)
chr4 (289-327)||(33871283-33871321)
chr4 (290-332)||(53526253-53526295)
chr4 (289-330)||(1492863-1492904)
chr4 (291-332)||(10374046-10374087)
chr4 (296-329)||(21097153-21097186)
chr4 (289-330)||(41025062-41025103)
chr4 (289-330)||(53526454-53526495)
chr4 (289-330)||(55660444-55660485)
[»] chr7 (48 HSPs)
chr7 (277-360)||(46358622-46358705)
chr7 (283-360)||(47340249-47340326)
chr7 (282-354)||(41910998-41911070)
chr7 (283-360)||(763799-763876)
chr7 (283-360)||(30884109-30884186)
chr7 (283-360)||(31660171-31660248)
chr7 (283-352)||(35737058-35737127)
chr7 (289-360)||(48692022-48692093)
chr7 (285-354)||(16933132-16933201)
chr7 (285-354)||(16938515-16938584)
chr7 (283-360)||(46572569-46572646)
chr7 (283-354)||(32685839-32685910)
chr7 (284-354)||(15973856-15973926)
chr7 (283-337)||(34228600-34228654)
chr7 (282-330)||(48830601-48830649)
chr7 (283-331)||(11732037-11732085)
chr7 (284-332)||(46025060-46025108)
chr7 (283-332)||(33798733-33798782)
chr7 (283-331)||(24360756-24360804)
chr7 (290-329)||(15974955-15974994)
chr7 (289-332)||(26945714-26945757)
chr7 (290-329)||(30428880-30428919)
chr7 (289-332)||(38837729-38837772)
chr7 (289-332)||(44426599-44426642)
chr7 (289-354)||(48306331-48306392)
chr7 (283-328)||(12286723-12286768)
chr7 (289-330)||(46004537-46004578)
chr7 (290-329)||(12279752-12279791)
chr7 (289-332)||(31365272-31365315)
chr7 (289-332)||(34227677-34227720)
chr7 (289-332)||(43742250-43742293)
chr7 (289-332)||(44426799-44426842)
chr7 (290-329)||(48690902-48690941)
chr7 (289-330)||(7845099-7845140)
chr7 (289-330)||(34227878-34227919)
chr7 (289-330)||(41065971-41066012)
chr7 (297-329)||(28396736-28396768)
chr7 (289-332)||(5728626-5728669)
chr7 (289-332)||(5728880-5728923)
chr7 (289-332)||(6620620-6620663)
chr7 (289-332)||(26945515-26945558)
chr7 (291-330)||(38837543-38837582)
chr7 (289-332)||(45478514-45478557)
chr7 (290-329)||(46024034-46024073)
chr7 (290-332)||(46004343-46004385)
chr7 (289-330)||(924498-924539)
chr7 (297-334)||(5758308-5758345)
chr7 (283-328)||(25779708-25779753)
[»] chr2 (48 HSPs)
chr2 (281-360)||(39355137-39355216)
chr2 (283-360)||(7487141-7487218)
chr2 (283-360)||(1292066-1292143)
chr2 (283-360)||(8149933-8150010)
chr2 (283-360)||(8154557-8154634)
chr2 (283-360)||(15016453-15016530)
chr2 (283-360)||(18297163-18297240)
chr2 (285-354)||(34464819-34464888)
chr2 (289-360)||(25193963-25194034)
chr2 (283-330)||(41345082-41345129)
chr2 (290-329)||(18298130-18298169)
chr2 (290-329)||(25192899-25192938)
chr2 (289-332)||(31783794-31783837)
chr2 (289-332)||(34726605-34726648)
chr2 (311-353)||(18762946-18762988)
chr2 (289-331)||(20661397-20661439)
chr2 (289-330)||(24183599-24183640)
chr2 (297-334)||(43823873-43823910)
chr2 (290-330)||(19246664-19246704)
chr2 (319-354)||(4578590-4578625)
chr2 (289-332)||(16111705-16111748)
chr2 (289-332)||(20661595-20661638)
chr2 (290-329)||(20709781-20709820)
chr2 (289-332)||(22596305-22596348)
chr2 (289-332)||(22596504-22596547)
chr2 (289-332)||(31711511-31711554)
chr2 (289-332)||(34726796-34726839)
chr2 (289-332)||(42364693-42364736)
chr2 (289-332)||(44915491-44915534)
chr2 (289-330)||(12449055-12449096)
chr2 (289-330)||(12449245-12449286)
chr2 (289-330)||(25575324-25575365)
chr2 (289-330)||(37867155-37867196)
chr2 (289-330)||(37867357-37867398)
chr2 (289-330)||(42364493-42364534)
chr2 (296-332)||(15252847-15252883)
chr2 (287-331)||(36635754-36635798)
chr2 (313-360)||(2264626-2264673)
chr2 (321-360)||(9143687-9143726)
chr2 (289-332)||(30777296-30777339)
chr2 (289-320)||(31783997-31784028)
chr2 (289-331)||(20194028-20194070)
chr2 (321-354)||(14550465-14550498)
chr2 (289-330)||(15150293-15150334)
chr2 (289-330)||(15253022-15253063)
chr2 (289-330)||(22588319-22588360)
chr2 (287-328)||(44340258-44340299)
chr2 (289-330)||(44915292-44915333)
[»] scaffold0074 (2 HSPs)
scaffold0074 (282-360)||(24376-24454)
scaffold0074 (283-320)||(44777-44814)
[»] chr8 (56 HSPs)
chr8 (278-360)||(1149905-1149987)
chr8 (283-360)||(4835513-4835590)
chr8 (283-354)||(34633208-34633279)
chr8 (282-360)||(41451207-41451285)
chr8 (291-360)||(1209758-1209827)
chr8 (283-360)||(10237456-10237533)
chr8 (283-352)||(15227140-15227209)
chr8 (283-352)||(30414024-30414093)
chr8 (289-354)||(39657709-39657774)
chr8 (282-360)||(41099284-41099365)
chr8 (283-361)||(2751206-2751284)
chr8 (283-354)||(19784379-19784450)
chr8 (299-360)||(4840974-4841035)
chr8 (289-353)||(7059144-7059208)
chr8 (283-331)||(35301624-35301672)
chr8 (283-336)||(15259850-15259903)
chr8 (283-334)||(23397441-23397492)
chr8 (286-331)||(34647169-34647214)
chr8 (290-329)||(1208716-1208755)
chr8 (283-334)||(9853254-9853305)
chr8 (289-332)||(17792892-17792935)
chr8 (290-329)||(32987464-32987503)
chr8 (289-332)||(35448610-35448653)
chr8 (290-329)||(39021982-39022021)
chr8 (290-332)||(1672931-1672973)
chr8 (290-332)||(27506708-27506750)
chr8 (290-328)||(42433708-42433746)
chr8 (283-328)||(42434566-42434611)
chr8 (286-330)||(40022386-40022430)
chr8 (287-330)||(185880-185923)
chr8 (290-329)||(7058121-7058160)
chr8 (321-360)||(7857782-7857821)
chr8 (289-332)||(15808886-15808929)
chr8 (289-332)||(17656619-17656662)
chr8 (289-332)||(23567487-23567530)
chr8 (289-332)||(23567643-23567686)
chr8 (300-334)||(1672769-1672803)
chr8 (289-331)||(18757329-18757371)
chr8 (286-328)||(40004716-40004758)
chr8 (318-360)||(43690742-43690784)
chr8 (289-330)||(10586063-10586104)
chr8 (289-330)||(15809842-15809883)
chr8 (283-328)||(17232881-17232925)
chr8 (291-332)||(21120195-21120236)
chr8 (289-330)||(24473246-24473287)
chr8 (283-331)||(39023000-39023048)
chr8 (289-332)||(186081-186124)
chr8 (290-329)||(4836720-4836759)
chr8 (290-329)||(4842165-4842204)
chr8 (289-332)||(23347721-23347764)
chr8 (297-332)||(28979291-28979326)
chr8 (289-332)||(32644048-32644090)
chr8 (289-331)||(10585861-10585903)
chr8 (290-320)||(18161290-18161320)
chr8 (289-330)||(34343250-34343291)
chr8 (289-330)||(34343453-34343494)
[»] chr1 (65 HSPs)
chr1 (282-360)||(23817412-23817490)
chr1 (283-360)||(24636028-24636105)
chr1 (283-354)||(48762218-48762289)
chr1 (286-360)||(49936827-49936901)
chr1 (283-360)||(16976057-16976134)
chr1 (283-360)||(19897647-19897724)
chr1 (283-360)||(43452644-43452721)
chr1 (282-360)||(20434608-20434686)
chr1 (283-360)||(21641589-21641666)
chr1 (282-360)||(11422542-11422620)
chr1 (283-361)||(23920966-23921044)
chr1 (283-352)||(6314226-6314295)
chr1 (283-360)||(18618937-18619013)
chr1 (283-360)||(25888916-25888992)
chr1 (289-360)||(23174403-23174474)
chr1 (283-360)||(4097105-4097181)
chr1 (283-353)||(180832-180902)
chr1 (283-334)||(21255835-21255886)
chr1 (309-360)||(50351905-50351956)
chr1 (283-334)||(18057807-18057858)
chr1 (283-330)||(31084404-31084451)
chr1 (287-332)||(17893071-17893116)
chr1 (312-360)||(34370489-34370537)
chr1 (309-360)||(8401423-8401474)
chr1 (289-332)||(9628599-9628642)
chr1 (290-329)||(18056791-18056830)
chr1 (289-332)||(33156993-33157036)
chr1 (289-332)||(42134133-42134176)
chr1 (289-330)||(1395353-1395394)
chr1 (289-330)||(10974634-10974675)
chr1 (289-330)||(14229173-14229214)
chr1 (289-330)||(17893275-17893316)
chr1 (291-332)||(45849111-45849152)
chr1 (287-331)||(32595284-32595328)
chr1 (289-328)||(9041055-9041094)
chr1 (289-332)||(12796424-12796467)
chr1 (289-332)||(14229361-14229404)
chr1 (293-332)||(18928783-18928822)
chr1 (289-332)||(18928955-18928998)
chr1 (290-329)||(22348046-22348085)
chr1 (284-331)||(23319011-23319058)
chr1 (289-332)||(31763973-31764016)
chr1 (289-332)||(32595105-32595148)
chr1 (283-330)||(45890595-45890642)
chr1 (289-331)||(32143770-32143812)
chr1 (289-331)||(42133945-42133987)
chr1 (289-330)||(12070612-12070653)
chr1 (289-330)||(17811285-17811326)
chr1 (287-328)||(19861717-19861758)
chr1 (289-330)||(29945418-29945459)
chr1 (289-330)||(31763776-31763817)
chr1 (291-332)||(45849309-45849350)
chr1 (296-332)||(14389852-14389888)
chr1 (297-329)||(16115865-16115897)
chr1 (289-332)||(33157180-33157223)
chr1 (290-332)||(1395166-1395208)
chr1 (282-328)||(15990688-15990734)
chr1 (281-311)||(23276982-23277012)
chr1 (290-328)||(23921918-23921956)
chr1 (289-319)||(49992519-49992549)
chr1 (289-330)||(11354513-11354554)
chr1 (289-330)||(14390046-14390087)
chr1 (292-329)||(45889605-45889642)
chr1 (292-320)||(41033274-41033302)
chr1 (291-331)||(46590760-46590800)
[»] chr6 (38 HSPs)
chr6 (283-360)||(6900905-6900982)
chr6 (283-360)||(15493276-15493353)
chr6 (282-360)||(34869949-34870027)
chr6 (283-360)||(7089184-7089261)
chr6 (283-360)||(1449644-1449721)
chr6 (283-354)||(878368-878439)
chr6 (283-354)||(31216770-31216841)
chr6 (282-330)||(7765406-7765454)
chr6 (285-334)||(30909437-30909486)
chr6 (290-331)||(15034992-15035033)
chr6 (275-336)||(18612358-18612419)
chr6 (283-328)||(18755658-18755703)
chr6 (308-360)||(33345356-33345407)
chr6 (308-360)||(35121491-35121542)
chr6 (290-329)||(12394399-12394438)
chr6 (290-329)||(33346390-33346429)
chr6 (314-360)||(1536814-1536860)
chr6 (289-331)||(19284372-19284414)
chr6 (289-331)||(21384990-21385032)
chr6 (289-330)||(10588955-10588996)
chr6 (289-330)||(22857489-22857530)
chr6 (279-331)||(10698568-10698620)
chr6 (287-334)||(4101964-4102011)
chr6 (289-332)||(14237779-14237822)
chr6 (287-330)||(20522850-20522893)
chr6 (289-332)||(22857677-22857720)
chr6 (289-332)||(25119470-25119513)
chr6 (289-330)||(19281284-19281325)
chr6 (289-330)||(25119107-25119148)
chr6 (287-328)||(28132783-28132824)
chr6 (282-330)||(20522663-20522711)
chr6 (290-322)||(34399648-34399680)
chr6 (289-332)||(21384790-21384833)
chr6 (287-328)||(22030107-22030148)
chr6 (327-360)||(24736574-24736607)
chr6 (327-360)||(24736610-24736643)
chr6 (297-330)||(29163719-29163752)
chr6 (297-329)||(29157240-29157272)
[»] chr5 (53 HSPs)
chr5 (283-360)||(14394570-14394647)
chr5 (283-360)||(14940243-14940320)
chr5 (282-354)||(26637723-26637795)
chr5 (281-360)||(37456782-37456861)
chr5 (283-360)||(3883922-3883999)
chr5 (283-353)||(15416773-15416843)
chr5 (282-360)||(30783560-30783637)
chr5 (282-354)||(13553091-13553163)
chr5 (283-353)||(28069242-28069312)
chr5 (284-334)||(13363792-13363842)
chr5 (289-332)||(11660982-11661025)
chr5 (290-329)||(13362777-13362816)
chr5 (289-332)||(22695540-22695583)
chr5 (287-330)||(23155524-23155567)
chr5 (283-334)||(23334706-23334756)
chr5 (290-329)||(25017236-25017275)
chr5 (290-329)||(28070172-28070211)
chr5 (289-332)||(39861780-39861823)
chr5 (283-325)||(23948588-23948630)
chr5 (289-330)||(3340591-3340632)
chr5 (289-330)||(15559050-15559091)
chr5 (297-334)||(16667667-16667704)
chr5 (283-328)||(25189817-25189862)
chr5 (307-352)||(34330166-34330211)
chr5 (289-332)||(20134200-20134243)
chr5 (289-332)||(20134399-20134442)
chr5 (289-332)||(20696327-20696370)
chr5 (289-332)||(22671997-22672040)
chr5 (290-329)||(23335726-23335765)
chr5 (287-330)||(25671290-25671333)
chr5 (290-329)||(34329134-34329173)
chr5 (289-332)||(35662068-35662111)
chr5 (289-332)||(35662233-35662276)
chr5 (289-332)||(39861580-39861623)
chr5 (290-332)||(22830788-22830830)
chr5 (290-332)||(23155843-23155885)
chr5 (291-332)||(5630271-5630312)
chr5 (289-330)||(11660794-11660835)
chr5 (289-330)||(16552248-16552289)
chr5 (289-330)||(39086518-39086559)
chr5 (287-332)||(39166150-39166195)
chr5 (289-330)||(39166342-39166383)
chr5 (290-330)||(703732-703772)
chr5 (289-332)||(15059633-15059677)
chr5 (289-332)||(7286954-7286996)
chr5 (289-320)||(25545584-25545615)
chr5 (289-332)||(42746520-42746563)
chr5 (289-331)||(36864068-36864110)
chr5 (289-330)||(5411758-5411799)
chr5 (289-330)||(7286754-7286795)
chr5 (290-331)||(15559134-15559175)
chr5 (289-330)||(36864270-36864311)
chr5 (290-319)||(39086719-39086748)
[»] chr3 (61 HSPs)
chr3 (283-360)||(9595867-9595944)
chr3 (283-359)||(54379265-54379341)
chr3 (283-354)||(6097571-6097642)
chr3 (283-354)||(30947798-30947869)
chr3 (282-352)||(3475293-3475363)
chr3 (278-352)||(19284781-19284855)
chr3 (283-360)||(9106369-9106446)
chr3 (283-360)||(26662425-26662502)
chr3 (290-360)||(50755164-50755234)
chr3 (283-360)||(2941813-2941890)
chr3 (283-352)||(10986462-10986531)
chr3 (283-360)||(19384376-19384453)
chr3 (283-360)||(26960728-26960805)
chr3 (280-354)||(51361515-51361589)
chr3 (283-360)||(46237645-46237722)
chr3 (283-354)||(33413899-33413971)
chr3 (283-360)||(47335134-47335216)
chr3 (283-336)||(8719133-8719186)
chr3 (283-336)||(9071020-9071073)
chr3 (283-331)||(34562394-34562442)
chr3 (311-354)||(31853164-31853207)
chr3 (282-332)||(16276663-16276713)
chr3 (282-331)||(41191403-41191452)
chr3 (289-332)||(8036801-8036844)
chr3 (290-329)||(19385334-19385373)
chr3 (289-332)||(36185905-36185948)
chr3 (289-332)||(50416481-50416524)
chr3 (289-332)||(50416564-50416607)
chr3 (290-329)||(51362457-51362496)
chr3 (275-332)||(12973999-12974056)
chr3 (286-323)||(17620734-17620771)
chr3 (290-331)||(47924367-47924408)
chr3 (290-330)||(8718108-8718148)
chr3 (290-330)||(9069995-9070035)
chr3 (290-330)||(27446215-27446255)
chr3 (289-332)||(8036989-8037032)
chr3 (289-332)||(12974191-12974233)
chr3 (290-329)||(16277433-16277472)
chr3 (289-332)||(19012562-19012605)
chr3 (289-332)||(36185727-36185770)
chr3 (290-329)||(50754013-50754052)
chr3 (290-332)||(47225848-47225890)
chr3 (291-332)||(21175268-21175309)
chr3 (297-334)||(23756295-23756332)
chr3 (283-328)||(40220788-40220833)
chr3 (296-329)||(52987669-52987702)
chr3 (290-329)||(7045319-7045358)
chr3 (289-332)||(16653498-16653540)
chr3 (289-332)||(19012393-19012435)
chr3 (289-320)||(27068533-27068564)
chr3 (296-331)||(30794857-30794892)
chr3 (289-332)||(38345281-38345324)
chr3 (289-332)||(47225761-47225804)
chr3 (289-332)||(49053426-49053469)
chr3 (282-328)||(8054962-8055008)
chr3 (297-334)||(23700100-23700137)
chr3 (297-334)||(23718555-23718592)
chr3 (297-334)||(23737011-23737048)
chr3 (289-330)||(47729258-47729299)
chr3 (289-332)||(47924163-47924209)
chr3 (290-330)||(49053227-49053267)
[»] scaffold0571 (1 HSPs)
scaffold0571 (283-360)||(540-617)
[»] scaffold0045 (1 HSPs)
scaffold0045 (283-360)||(33786-33863)
[»] scaffold0338 (1 HSPs)
scaffold0338 (290-360)||(6485-6555)
[»] scaffold0581 (1 HSPs)
scaffold0581 (308-354)||(8333-8379)
[»] scaffold0516 (1 HSPs)
scaffold0516 (289-332)||(1248-1291)
[»] scaffold0249 (2 HSPs)
scaffold0249 (289-332)||(23545-23588)
scaffold0249 (291-331)||(23736-23776)
[»] scaffold0238 (1 HSPs)
scaffold0238 (290-329)||(25251-25290)
[»] scaffold0194 (1 HSPs)
scaffold0194 (283-334)||(28673-28724)
[»] scaffold0050 (1 HSPs)
scaffold0050 (285-328)||(20974-21017)
[»] scaffold0221 (1 HSPs)
scaffold0221 (282-328)||(20478-20524)
[»] scaffold0102 (2 HSPs)
scaffold0102 (289-331)||(33617-33659)
scaffold0102 (289-332)||(33817-33859)
[»] scaffold0129 (1 HSPs)
scaffold0129 (289-330)||(20122-20163)
[»] scaffold0009 (2 HSPs)
scaffold0009 (291-332)||(51908-51949)
scaffold0009 (289-334)||(202913-202958)
[»] scaffold0544 (1 HSPs)
scaffold0544 (290-329)||(10694-10733)
[»] scaffold0097 (1 HSPs)
scaffold0097 (290-329)||(13620-13659)
[»] scaffold0189 (1 HSPs)
scaffold0189 (290-328)||(11210-11248)
[»] scaffold0455 (1 HSPs)
scaffold0455 (287-328)||(10689-10730)
[»] scaffold0154 (1 HSPs)
scaffold0154 (283-328)||(37483-37528)
[»] scaffold0004 (1 HSPs)
scaffold0004 (290-331)||(96001-96042)
[»] scaffold0126 (1 HSPs)
scaffold0126 (289-332)||(37634-37677)
[»] scaffold0664 (1 HSPs)
scaffold0664 (290-332)||(3154-3196)
[»] scaffold0031 (1 HSPs)
scaffold0031 (280-330)||(80869-80919)
[»] scaffold1450 (1 HSPs)
scaffold1450 (289-318)||(751-780)
[»] scaffold0019 (2 HSPs)
scaffold0019 (289-330)||(72704-72745)
scaffold0019 (292-320)||(164070-164098)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 6e-96; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 4169668 - 4169479
Alignment:
Q  18 aaaactgactctatatgcagcaattacctttctggaaacttagtattgtttggattgaattcgttttatttggtcaattgagactaaaatactagaatgt 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4169668 aaaactgactctatatgcagcaattacctttttggaaacttagtattgtttggattgaattcgttttatttggtcaattgagactaaaatactagaatgt 4169569  T
Q  118 accttgatggttttgtgcttaagaatggatcagtttgttattataaaataatagaatggatctgtctttaacacctaaaattattgtaag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4169568 accttgatggttttgtgcttaagaatggatcagtttgttattataaaataatataatggatctgtctttaacacctaaaactattgtaag 4169479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 49425944 - 49426021
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49425944 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 49426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 11786153 - 11786082
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11786153 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 11786082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 11798320 - 11798249
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11798320 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 11798249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 13635615 - 13635689
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13635615 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 13635689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 15051022 - 15051100
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15051022 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaa 15051100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 45256944 - 45256867
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45256944 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 45256867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 49492396 - 49492469
Alignment:
Q  280 tgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49492396 tgtgggagtagttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 49492469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 50644717 - 50644641
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaac 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  50644717 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctatacccccaaac 50644641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 30597874 - 30597807
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30597874 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 30597807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 53441500 - 53441422
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  53441500 tgggagtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacacccccaaa 53441422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 639035 - 638966
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 638966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 27865624 - 27865701
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  27865624 gggagtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 27865701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 10473703 - 10473620
Alignment:
Q  277 ttttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  10473703 ttttttgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacacccccaaa 10473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 4175157 - 4175072
Alignment:
Q  18 aaaactgactctatatgcagcaattacctttctggaaacttagtattgtttggattgaattcgttttatttggtcaattgagacta 103  Q
    |||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||| |||||||||||||||| ||||||    
T  4175157 aaaactgactctatatgcagcaattacctttctgaaaacttaagcttgtttggattgaattcattttatttggtcaatttagacta 4175072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 26577257 - 26577333
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacacccccaaa 26577333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 51921166 - 51921229
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 51921229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 35291451 - 35291512
Alignment:
Q  299 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 35291512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 46672617 - 46672546
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  46672617 gggagtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacacc 46672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 51836328 - 51836393
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  51836328 ggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacacc 51836393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 30358886 - 30358835
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30358886 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 22180200 - 22180252
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22180200 tgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 54895635 - 54895583
Alignment:
Q  280 tgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  54895635 tgtgggtgtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 54895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 25715642 - 25715687
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  25715642 gtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 25715687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 8165763 - 8165806
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8165763 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8165806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 17109961 - 17109918
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  17109961 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 21995671 - 21995714
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  21995671 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 21995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 22181303 - 22181264
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22181303 gttatggtgcataaggaaatccttatgcaccgtgcataaa 22181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 27764247 - 27764286
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27764247 gttatggtgcataaggaaatccttatgcaccgtgcataaa 27764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 30779344 - 30779387
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  30779344 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 30779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 36621759 - 36621720
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36621759 gttatggtgcataaggaaatccttatgcaccgtgcataaa 36621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 36924242 - 36924285
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  36924242 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 37059712 - 37059755
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  37059712 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 37059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 45255982 - 45256021
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45255982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 45256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 50643750 - 50643789
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50643750 gttatggtgcataaggaaatccttatgcaccgtgcataaa 50643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 53865286 - 53865243
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  53865286 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 53865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 1492673 - 1492715
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  1492673 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 1492715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 33819692 - 33819734
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  33819692 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 33819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 1728620 - 1728669
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  1728620 gggagtggttatggtgcataagaaaattcttatgtaccgtgcataaatcc 1728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 2124345 - 2124386
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  2124345 ggttatggtgcataaggaaatccttatgcaccctgcataaat 2124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 6841822 - 6841863
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  6841822 ggttatggtgcataaggaaatccttatgcaccctgcataaat 6841863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 8157331 - 8157290
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  8157331 gttatggtgcataaggaaatccttatgcaccctgcataaatc 8157290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 31763151 - 31763110
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  31763151 ggttatggtgcataaggaaatccttatgcaccctgcataaat 31763110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 36309419 - 36309460
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 36309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 48076921 - 48076958
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48076921 tgcataaggaaatccttatgcaccgtgcataaatccca 48076958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 50070714 - 50070759
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  50070714 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 50070759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 55782686 - 55782641
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  55782686 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 55846866 - 55846821
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  55846866 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 1622020 - 1621984
Alignment:
Q  318 accgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||||||||||||||||||||||    
T  1622020 accgtgcataaatcccaacataattgcttcctacacc 1621984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 14499247 - 14499291
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  14499247 ggagtggttatggtgcataaggatttccttatgcaccgtgcataa 14499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 21098181 - 21098133
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  21098181 gggagcggttatggtgtataaggaaatccttatgcaccatgcataaatc 21098133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 26447467 - 26447431
Alignment:
Q  293 atggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||||||||||||    
T  26447467 atggtgcataaggaaatccttatgcaccgtgcataaa 26447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 36011995 - 36011951
Alignment:
Q  310 ccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  36011995 ccttatgcaccgtgtataaatctcaacataattgcttcctacacc 36011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 2124588 - 2124545
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  2124588 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 2124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 12722981 - 12722938
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  12722981 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 12722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 17109720 - 17109763
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  17109720 ggttatggtgcataaggaaatccttatgtaccttgcataaatcc 17109763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 25715770 - 25715727
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  25715770 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 25715727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 43374448 - 43374491
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  43374448 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 43374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 51076901 - 51076940
Alignment:
Q  292 tatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  51076901 tatggtgcataaggaaatccttatgcaccctgcataaatc 51076940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 54895405 - 54895448
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  54895405 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 54895448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 55765635 - 55765596
Alignment:
Q  308 atccttatgcaccgtgcataaatcccaacataattgcttc 347  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  55765635 atccttatgcaccgtgcataaatcccaatataattgcttc 55765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 29826664 - 29826626
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  29826664 gttatggtacataaggaaatccttatgcaccgtgcataa 29826626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 33883525 - 33883483
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  33883525 gttatggtgcataaggaaatcattatgcaccctgcataaatcc 33883483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 36309660 - 36309618
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  36309660 ggttatggtgcataagaaaatccttatgcaccctgcataaatc 36309618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 562776 - 562817
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  562776 ggttatggtgcataaggaaatccctatgcaccctgcataaat 562817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 9813188 - 9813147
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  9813188 ggttatggtgcataaggaaatctttatgcaccctgcataaat 9813147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 31762930 - 31762971
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  31762930 ggttatggtgcataaggaaatccttatgcatcctgcataaat 31762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 33883295 - 33883336
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  33883295 ggttatggtgcataaggaaatccttatgcaccctgtataaat 33883336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 38010753 - 38010712
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  38010753 ggttatggtgcatacggaaatccttatgcaccctgcataaat 38010712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 43375564 - 43375523
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  43375564 ggttatggtgcatacggaaatccttatgcaccctgcataaat 43375523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 50562679 - 50562716
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||||||||||||||    
T  50562679 tgcataaggaaatccttatgcatcgtgcataaatccca 50562716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 12722738 - 12722782
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgca-ccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  12722738 ggttatggtgcataaggaaatccttatgcacccttgcataaatcc 12722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 48077896 - 48077864
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||||||||    
T  48077896 tgcataaggaaatccttatgcaccgtgcataaa 48077864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 16475063 - 16475020
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||| | |||||||||||    
T  16475063 ggttatggtgcataaggaaatctttatgcatcctgcataaatcc 16475020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 38245929 - 38245890
Alignment:
Q  321 gtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacccccaaa 38245890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 42788715 - 42788676
Alignment:
Q  292 tatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  42788715 tatggtgcataaggaaatccttatgcatcctgcataaatc 42788676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 47567897 - 47567940
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||    
T  47567897 ggttatggtgaataagaaaatccttatgcaccttgcataaatcc 47567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 4169471 - 4169429
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||| ||||||||| || ||||||||    
T  4169471 ggttatggtgcataaggaaattcttatgcactgtacataaatc 4169429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 29825716 - 29825754
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  29825716 gttatggtgcataaggatttccttatgcaccgtgcataa 29825754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 33871321 - 33871283
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcata 327  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  33871321 ggttatgatgcataaggaaatccttatgcaccctgcata 33871283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 53526253 - 53526295
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  53526253 gttatggtgcataagaaaatccttatgcactttgcataaatcc 53526295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 1492904 - 1492863
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  1492904 ggttatggtgcataaggatttccttatgcaccatgcataaat 1492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 10374046 - 10374087
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||| ||||||||||| ||||||||| |||||||||||    
T  10374046 ttatggtgtataaggaaatctttatgcaccctgcataaatcc 10374087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 21097153 - 21097186
Alignment:
Q  296 gtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||| |||||    
T  21097153 gtgcataaggaaatccttatgcaccgtgtataaa 21097186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 41025062 - 41025103
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||| ||||| |||||||||||||||| |||||||||    
T  41025062 ggttatggtacataatgaaatccttatgcaccctgcataaat 41025103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 53526495 - 53526454
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||| |||||| ||| |||||||||    
T  53526495 ggttatggtgcataaggaaattcttatgtaccctgcataaat 53526454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 55660485 - 55660444
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||| |||||| ||||||||| |||||||||    
T  55660485 ggttatggtgcataaagaaatctttatgcaccttgcataaat 55660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 46358705 - 46358622
Alignment:
Q  277 ttttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46358705 ttttttgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 46358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 47340326 - 47340249
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47340326 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 47340249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 41910998 - 41911070
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41910998 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 41911070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 763876 - 763799
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  763876 gggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaa 763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 30884109 - 30884186
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  30884109 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaa 30884186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 31660248 - 31660171
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  31660248 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaa 31660171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 35737127 - 35737058
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35737127 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35737058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 48692093 - 48692022
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48692093 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaa 48692022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 16933132 - 16933201
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16933132 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacc 16933201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 16938515 - 16938584
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16938515 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacc 16938584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 46572569 - 46572646
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  46572569 gggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 46572646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 32685839 - 32685910
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacacc 32685910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 15973856 - 15973926
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacacc 15973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 34228600 - 34228654
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaaca 337  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34228600 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 48830649 - 48830601
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48830649 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 48830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 11732037 - 11732085
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11732037 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatc 11732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 46025108 - 46025060
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaatcc 46025060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 33798782 - 33798733
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  33798782 gggagtggttatggtgcataaggaaatccttatgcaccgtacgtaaatcc 33798733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 24360804 - 24360756
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  24360804 gggagtggttatggtgcataaggaaatatttatgcaccgtgcataaatc 24360756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 15974994 - 15974955
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15974994 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15974955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 26945757 - 26945714
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  26945757 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 26945714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 30428880 - 30428919
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30428880 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 38837772 - 38837729
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  38837772 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 38837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 44426599 - 44426642
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  44426599 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 44426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 48306392 - 48306331
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||    
T  48306392 ggttatggtgcataagg---ttcttatgcaccgtgcataaatcccaacataatt-cttcctacacc 48306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 12286768 - 12286723
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||    
T  12286768 gggagtggttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 46004578 - 46004537
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  46004578 ggttatggtgcataaggaaatccttatgcaccctgcataaat 46004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 12279752 - 12279791
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  12279752 gttatggtgcataaggaaatctttatgcaccgtgcataaa 12279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 31365272 - 31365315
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  31365272 ggttatggtgcataaggaaatccttatgcatcttgcataaatcc 31365315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 34227677 - 34227720
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  34227677 ggttatggtgcataaggaaatccttatgcaacctgcataaatcc 34227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 43742250 - 43742293
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  43742250 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 43742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 44426842 - 44426799
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  44426842 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 44426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 48690902 - 48690941
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  48690902 gttatggtgcataaagaaatccttatgcaccgtgcataaa 48690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 7845140 - 7845099
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  7845140 ggttatggtgcataaggaaatccttatgcaacctgcataaat 7845099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 34227919 - 34227878
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  34227919 ggttatggtgcataaggaaattcttatgcaccctgcataaat 34227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 41066012 - 41065971
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  41066012 ggttatggtgcataaggaaatccttatgtaccctgcataaat 41065971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 28396736 - 28396768
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||||||||    
T  28396736 tgcataaggaaatccttatgcaccgtgcataaa 28396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 5728626 - 5728669
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||| |||||| |||||||||||||||||| |||||||||||    
T  5728626 ggttatagtgcatgaggaaatccttatgcaccttgcataaatcc 5728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 5728923 - 5728880
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| |||| |||||||||| |||||||||||    
T  5728923 ggttatggtgcataagaaaattcttatgcaccctgcataaatcc 5728880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 6620620 - 6620663
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  6620620 ggttatggtgcataacgaaatccttatgcactatgcataaatcc 6620663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 26945515 - 26945558
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||    
T  26945515 ggttatggtgcataaggaaattcttatgcaccctgcatatatcc 26945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 38837543 - 38837582
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  38837543 ttatggtgcatacggaaatccttatgcaccctgcataaat 38837582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 45478557 - 45478514
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||||| | |||||||||||    
T  45478557 ggttatggtgcataagaaaatccttatgcatcttgcataaatcc 45478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 46024034 - 46024073
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  46024034 gttatggtgcacaagaaaatccttatgcaccgtgcataaa 46024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 46004343 - 46004385
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||| |||||||||||||||  |||||||||||    
T  46004343 gttatggtgcataacgaaatccttatgcactctgcataaatcc 46004385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 924498 - 924539
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||| |||| |||| |||||||||    
T  924498 ggttatggtgcataaggaaatctttatacaccttgcataaat 924539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 5758345 - 5758308
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  5758345 tgcataaggaaatccttatgcatcgtggataaatccca 5758308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 25779753 - 25779708
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||  |||||||||||||  ||||||||||||||||||||    
T  25779753 gggagtggtattggtgcataaggatttccttatgcaccgtgcataa 25779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 39355216 - 39355137
Alignment:
Q  281 gtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39355216 gtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 39355137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 7487141 - 7487218
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7487141 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaa 7487218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 1292066 - 1292143
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  1292066 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacccccaaa 1292143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 8150010 - 8149933
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8150010 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 8149933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 8154634 - 8154557
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8154634 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 8154557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 15016453 - 15016530
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  15016453 gggagtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaa 15016530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 18297163 - 18297240
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18297163 gggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 18297240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 34464888 - 34464819
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34464888 gagtggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacacc 34464819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 25194034 - 25193963
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  25194034 ggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacacccccaaa 25193963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 41345082 - 41345129
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 41345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 18298169 - 18298130
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18298169 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 25192899 - 25192938
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25192899 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 31783794 - 31783837
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  31783794 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 31783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 34726605 - 34726648
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  34726605 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 311 - 353
Target Start/End: Complemental strand, 18762988 - 18762946
Alignment:
Q  311 cttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacac 18762946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 20661397 - 20661439
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  20661397 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 20661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 24183640 - 24183599
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  24183640 ggttatggtgcataaggaaatccttatgcaccctgcataaat 24183599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 43823910 - 43823873
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43823910 tgcataaggaaatccttatgcaccgtgcataaatccca 43823873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 19246664 - 19246704
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  19246664 gttatggtgcataaggaaatccttatgcaccctgcataaat 19246704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 4578590 - 4578625
Alignment:
Q  319 ccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578590 ccgtgcataaatcccaacataattgcttcctacacc 4578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 16111748 - 16111705
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  16111748 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 16111705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 20661638 - 20661595
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  20661638 ggttatggtgcataaggaaatcattatgcaccctgcataaatcc 20661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 20709781 - 20709820
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20709781 gttatggtgcataaggaaatccttatccaccgtgcataaa 20709820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 22596305 - 22596348
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  22596305 ggttatggtgtataaggaaatccttatgcaccctgcataaatcc 22596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 22596547 - 22596504
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  22596547 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 22596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 31711511 - 31711554
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  31711511 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 31711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 34726839 - 34726796
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  34726839 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 34726796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 42364736 - 42364693
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  42364736 ggttatggtgcaaaaggaaatccttatgcaccctgcataaatcc 42364693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 44915534 - 44915491
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  44915534 ggttatggtgcataaggaaatgcttatgcaccctgcataaatcc 44915491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 12449055 - 12449096
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  12449055 ggttatggtgcataaggaaatccttatgcacactgcataaat 12449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 12449286 - 12449245
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  12449286 ggttatggtgcataaggaaatctttatgcaccttgcataaat 12449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 25575324 - 25575365
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  25575324 ggttatggtgcataaggaaatccttatgcatcctgcataaat 25575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 37867155 - 37867196
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  37867155 ggttatggtgcataaggaaatccttatccaccctgcataaat 37867196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 37867398 - 37867357
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  37867398 ggttacggtgcataaggaaatccttatgcaccctgcataaat 37867357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 42364493 - 42364534
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  42364493 ggttatggtgcataagaaaatccttatgcaccctgcataaat 42364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 15252847 - 15252883
Alignment:
Q  296 gtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15252847 gtgcataaggaaatccttatgcaccctgcataaatcc 15252883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 36635754 - 36635798
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||    
T  36635754 gtggttatcatgcataaagaaatccttatgcaccgtgcataaatc 36635798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 2264673 - 2264626
Alignment:
Q  313 tatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||| || ||||||| ||||||||||||||||||||||| |||||    
T  2264673 tatgcacagtacataaattccaacataattgcttcctacacccccaaa 2264626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 9143726 - 9143687
Alignment:
Q  321 gtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccccaaa 9143687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 30777296 - 30777339
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  30777296 ggttatggtgcataaaaaaatccttatgcaccctgcataaatcc 30777339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 320
Target Start/End: Complemental strand, 31784028 - 31783997
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcacc 320  Q
    ||||||||||||||||||||||||||||||||    
T  31784028 ggttatggtgcataaggaaatccttatgcacc 31783997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 20194070 - 20194028
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||| |||||||||| | ||||||||    
T  20194070 ggttatggtgcataaggaaattcttatgcaccctacataaatc 20194028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 14550465 - 14550498
Alignment:
Q  321 gtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||| ||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacacc 14550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 15150334 - 15150293
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||| ||||||||||||| | |||||||||    
T  15150334 ggttatggtgcataagaaaatccttatgcatcctgcataaat 15150293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 15253063 - 15253022
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||| |||| |||||||||||||||| |||||||||    
T  15253063 ggttatggtgtataacgaaatccttatgcaccctgcataaat 15253022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 22588319 - 22588360
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  22588319 ggttatggtgcataaggatttccttatgcaccctgcataaat 22588360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 44340258 - 44340299
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  44340258 gtggttatggtgcataaggatttacttatgcaccgtgcataa 44340299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 44915292 - 44915333
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||| ||||||| | |||||||||    
T  44915292 ggttatggtgcataaggaaatctttatgcagcctgcataaat 44915333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 24454 - 24376
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24454 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 24376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 44777 - 44814
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcacc 320  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  44777 gggagtggttatggtgcataaggaaattcttatgcacc 44814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 1149905 - 1149987
Alignment:
Q  278 tttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  1149905 tttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacctccaaa 1149987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 4835513 - 4835590
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4835513 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 4835590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 34633208 - 34633279
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34633208 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacacc 34633279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 41451285 - 41451207
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  41451285 tgggagtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacctccaaa 41451207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 1209827 - 1209758
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 1209758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 10237533 - 10237456
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  10237533 gggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacacccccaaa 10237456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 15227209 - 15227140
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15227209 gggagtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 30414093 - 30414024
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30414093 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 39657709 - 39657774
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39657709 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 39657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 41099365 - 41099284
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatc---cttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41099365 tgggagtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 41099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 361
Target Start/End: Complemental strand, 2751284 - 2751206
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaac 361  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccccaaac 2751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 19784450 - 19784379
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19784450 gggagtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacacc 19784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 4840974 - 4841035
Alignment:
Q  299 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 4841035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 7059208 - 7059144
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  7059208 ggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 35301624 - 35301672
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35301624 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 35301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 15259850 - 15259903
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 336  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 23397492 - 23397441
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23397492 gggaatggttatggtgcataaggaaatccttatgcaccatgcataaatccca 23397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 34647169 - 34647214
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  34647169 agtggttatggtgcataaggaaatccttatgcaccgtgtataaatc 34647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 1208716 - 1208755
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1208716 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 9853305 - 9853254
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  9853305 gggagtggttatggtgcataaaaaaatccttatgcactgtgcataaatccca 9853254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 17792935 - 17792892
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  17792935 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 32987503 - 32987464
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32987503 gttatggtgcataaggaaatccttatgcaccgtgcataaa 32987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 35448653 - 35448610
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  35448653 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 35448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 39021982 - 39022021
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39021982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 1672973 - 1672931
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 1672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 27506708 - 27506750
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 27506750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 42433708 - 42433746
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42433708 gttatggtgcataaggaaatccttatgcaccgtgcataa 42433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 42434611 - 42434566
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  42434611 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 42434566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 40022386 - 40022430
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  40022386 agtggttatggtgcataaggaaatccttatgcactgtgtataaat 40022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 185880 - 185923
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  185880 gtggttatggtgcataaggaaatccttatgcactctgcataaat 185923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 7058121 - 7058160
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  7058121 gttatggtgcataaggaaatacttatgcaccgtgcataaa 7058160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 7857821 - 7857782
Alignment:
Q  321 gtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccccaaa 7857782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 15808886 - 15808929
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  15808886 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 15808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 17656619 - 17656662
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  17656619 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 17656662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 23567487 - 23567530
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  23567487 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 23567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 23567686 - 23567643
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  23567686 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 23567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 1672803 - 1672769
Alignment:
Q  300 ataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||||||||||||||||    
T  1672803 ataaggaaatccttatgcaccgtgcataaatccca 1672769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 18757371 - 18757329
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  18757371 ggttatggtgcataaagaaatccttatgcaccctgcataaatc 18757329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 40004716 - 40004758
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  40004716 agtggttatggtgcataaggatttccttatgcaccgtgcataa 40004758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 43690784 - 43690742
Alignment:
Q  318 accgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  43690784 accgtgcataaatcccaacataattgctttctacacccccaaa 43690742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 10586104 - 10586063
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  10586104 ggttatgatgcataaggaaatccttatgcaccctgcataaat 10586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 15809883 - 15809842
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  15809883 ggttatggtgcataaggaaatccttatgcaccctccataaat 15809842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 17232925 - 17232881
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  17232925 gggagtggttatggtgcataaggatat-cttatgcaccgtgcataa 17232881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 21120195 - 21120236
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  21120195 ttatggtgcataatgaaatccttatgcaccatgcataaatcc 21120236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 24473287 - 24473246
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  24473287 ggttatggtgcataaggaaatccttatgcaccctgtataaat 24473246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 39023048 - 39023000
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| |||||||    
T  39023048 gggagcggttatggtgcataaggaaattcttatacaccgtgtataaatc 39023000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 186124 - 186081
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||| ||||||||||||||||||||| || ||||||||    
T  186124 ggttatggtgtataaggaaatccttatgcaccctgtataaatcc 186081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 4836759 - 4836720
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  4836759 gttatggtgcataaagaaatgcttatgcaccgtgcataaa 4836720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 4842204 - 4842165
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  4842204 gttatggtgcataaagaaatgcttatgcaccgtgcataaa 4842165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 23347764 - 23347721
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||    
T  23347764 ggttatggtgcataagaaaatccttatgaaccctgcataaatcc 23347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 28979291 - 28979326
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||| |||||||||||    
T  28979291 tgcataaggaaatccttatgcaccctgcataaatcc 28979326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 32644048 - 32644090
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  32644048 ggttatggtgcataaggaa-tccttatgcaccctgcataaatcc 32644090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 10585861 - 10585903
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  10585861 ggttacggtgcataagaaaatccttatgcaccatgcataaatc 10585903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Original strand, 18161290 - 18161320
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcacc 320  Q
    |||||||||||||||||||||||||||||||    
T  18161290 gttatggtgcataaggaaatccttatgcacc 18161320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 34343250 - 34343291
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||| ||||||||| | |||||||    
T  34343250 ggttatggtgcataaggaaatctttatgcaccctacataaat 34343291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 34343494 - 34343453
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||  ||||||||| |||||||||    
T  34343494 ggttatggtgcataaggaaattattatgcaccctgcataaat 34343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 23817490 - 23817412
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23817490 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 23817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 24636105 - 24636028
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24636105 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 24636028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 48762218 - 48762289
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48762218 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 48762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 49936827 - 49936901
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49936827 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 49936901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 16976134 - 16976057
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  16976134 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaa 16976057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 19897647 - 19897724
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  19897647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacacctccaaa 19897724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 43452721 - 43452644
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  43452721 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaa 43452644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 20434608 - 20434686
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  20434608 tgggagtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 20434686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 21641589 - 21641666
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21641589 gggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacaccaccaaa 21641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 11422620 - 11422542
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  11422620 tgggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacacccccaaa 11422542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 23920966 - 23921044
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaac 361  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacccccaaac 23921044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 6314295 - 6314226
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6314295 gggagtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctaca 6314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 18619013 - 18618937
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18619013 gggagtagttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 18618937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 25888916 - 25888992
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  25888916 gggagtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaa 25888992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 23174403 - 23174474
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23174403 ggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 23174474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 4097105 - 4097181
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  4097105 gggagcggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctacacccccaaa 4097181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 180902 - 180832
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    ||||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  180902 gggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacac 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 21255835 - 21255886
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21255835 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 50351956 - 50351905
Alignment:
Q  309 tccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 50351905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 18057858 - 18057807
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatccca 18057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 31084451 - 31084404
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31084451 gggagtggttatggtgcataaggaaatccttatgtaccgtgcataaat 31084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 17893071 - 17893116
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  17893071 gtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 34370537 - 34370489
Alignment:
Q  312 ttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaa 34370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 8401423 - 8401474
Alignment:
Q  309 tccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacacctccaaa 8401474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 9628642 - 9628599
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  9628642 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 9628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 18056791 - 18056830
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18056791 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 33156993 - 33157036
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  33156993 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 33157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 42134176 - 42134133
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  42134176 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 42134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 1395394 - 1395353
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  1395394 ggttatggtgcataaggaaatccttatgcaccatgcataaat 1395353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 10974634 - 10974675
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  10974634 ggttatggtgcataaggaaatccttatgcaccctgcataaat 10974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 14229173 - 14229214
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  14229173 ggttatggtgcataaggaaatccttatgcaccctgcataaat 14229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 17893316 - 17893275
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17893316 ggttatggtgcataaggaaatccttatgcaccctgcataaat 17893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 45849111 - 45849152
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 45849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 32595328 - 32595284
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  32595328 gtggttatggtgcataaggaaatccttatgcaccctgcttaaatc 32595284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 9041094 - 9041055
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  9041094 ggttatggtgcataaggaaatccttatgcaccctgcataa 9041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 12796424 - 12796467
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  12796424 ggttatggtgcataaggaaatccttctgcaccttgcataaatcc 12796467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 14229404 - 14229361
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  14229404 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 332
Target Start/End: Original strand, 18928783 - 18928822
Alignment:
Q  293 atggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  18928783 atggtgcataaggaaatccttatgcaccctgcataaatcc 18928822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 18928998 - 18928955
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  18928998 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 18928955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 22348046 - 22348085
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  22348046 gttatggtgcataaggaaatccttatgcaccgcgcataaa 22348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 23319011 - 23319058
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||||    
T  23319011 ggagcggttatggtggataaggaaatccttatgcactgtgcataaatc 23319058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 31764016 - 31763973
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  31764016 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 31763973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 32595105 - 32595148
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  32595105 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 32595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 45890642 - 45890595
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaat 45890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 32143812 - 32143770
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  32143812 ggttatggtgcataaggaaatccttatgcactctgcataaatc 32143770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 42133945 - 42133987
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||| | ||||||||||    
T  42133945 ggttatggtgcataaggaaatccttatgcatcctgcataaatc 42133987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 12070653 - 12070612
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  12070653 ggttatggtgcataaggaaattcttatgcaccctgcataaat 12070612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 17811326 - 17811285
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  17811326 ggttatggtgcataaggaaatccttatgcaccctgtataaat 17811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 19861758 - 19861717
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  19861758 gtggttatggtgcataaggatttccttatgcaccgtgcataa 19861717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 29945459 - 29945418
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  29945459 ggttatggtgcataaggaaatccttatgcactctgcataaat 29945418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 31763776 - 31763817
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  31763776 ggttatggtgcataaggaaatccttatacaccctgcataaat 31763817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 45849350 - 45849309
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  45849350 ttatggtgcataaggaaattcttatgcaccctgcataaatcc 45849309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 14389852 - 14389888
Alignment:
Q  296 gtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14389852 gtgcataaggaaatccttatgcaccctgcataaatcc 14389888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 16115865 - 16115897
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||||||||||    
T  16115865 tgcataaggaaatccttatgcaccgtgcataaa 16115897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 33157223 - 33157180
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||    
T  33157223 ggttatggtggataaggaaatcattatgcaccctgcataaatcc 33157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 1395166 - 1395208
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||| |||||| ||| |||||||    
T  1395166 gttatggtgcataaggaaatccttttgcaccctgcttaaatcc 1395208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 15990688 - 15990734
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||| ||||||||||  |||||||||||| |||||||    
T  15990688 tgggagtggttatgatgcataaggatttccttatgcaccatgcataa 15990734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 311
Target Start/End: Original strand, 23276982 - 23277012
Alignment:
Q  281 gtgggagtggttatggtgcataaggaaatcc 311  Q
    |||||||||||||||||||||||||||||||    
T  23276982 gtgggagtggttatggtgcataaggaaatcc 23277012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 23921956 - 23921918
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  23921956 gttattgtgcataaggaaatccttatgcatcgtgcataa 23921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 49992519 - 49992549
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcac 319  Q
    |||||||||||||||||||||||||||||||    
T  49992519 ggttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 11354554 - 11354513
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||| ||||||||||||||  |||||||||    
T  11354554 ggttatggtgcataagcaaatccttatgcactctgcataaat 11354513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 14390087 - 14390046
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  14390087 ggttatggtgcataaggatttccttatgcaccctgcataaat 14390046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 45889605 - 45889642
Alignment:
Q  292 tatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  45889605 tatggtgcataaggaaattcttatccaccgtgcataaa 45889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 41033302 - 41033274
Alignment:
Q  292 tatggtgcataaggaaatccttatgcacc 320  Q
    |||||||||||||||||||||||||||||    
T  41033302 tatggtgcataaggaaatccttatgcacc 41033274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 46590800 - 46590760
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||| ||||||||| || |||||||    
T  46590800 ttatggtgcataaggaaatctttatgcaccctgtataaatc 46590760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 6900982 - 6900905
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6900982 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 6900905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 15493353 - 15493276
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15493353 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 15493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 34869949 - 34870027
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  34869949 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaa 34870027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 7089261 - 7089184
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  7089261 gggagtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacacccccaaa 7089184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 1449721 - 1449644
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  1449721 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaa 1449644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 878439 - 878368
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  878439 gggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacacc 878368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 31216841 - 31216770
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||| |||||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  31216841 gggaatggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacacc 31216770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 7765454 - 7765406
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7765454 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 7765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 30909486 - 30909437
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30909486 gagtggttatggtgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 15035033 - 15034992
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15035033 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 15034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 18612419 - 18612358
Alignment:
Q  275 agttttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 336  Q
    ||||||||||| | ||||||  |||||||||||||||||||||||||| |||||||||||||    
T  18612419 agttttgtgggtgcggttatcatgcataaggaaatccttatgcaccgtacataaatcccaac 18612358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 18755658 - 18755703
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  18755658 gggagtggttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 33345356 - 33345407
Alignment:
Q  308 atccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  33345356 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacctccaaa 33345407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 35121542 - 35121491
Alignment:
Q  308 atccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35121542 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacccccaaa 35121491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 12394438 - 12394399
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12394438 gttatggtgcataaggaaatccttatgcaccgtgcataaa 12394399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 33346429 - 33346390
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33346429 gttatggtgcataaggaaatccttatgcaccgtgcataaa 33346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 360
Target Start/End: Original strand, 1536814 - 1536860
Alignment:
Q  314 atgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  1536814 atgcaccgtgcataaatcccaatataattgcttcctacacccccaaa 1536860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 19284372 - 19284414
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  19284372 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 19284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 21385032 - 21384990
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  21385032 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 21384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 10588996 - 10588955
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  10588996 ggttatggtgcataaggaaatccttatgcaccctgcataaat 10588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 22857489 - 22857530
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22857489 ggttatggtgcataaggaaatccttatgcaccctgcataaat 22857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 10698568 - 10698620
Alignment:
Q  279 ttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||| | ||||||||||||||||||||||||| |||||| ||||||||||    
T  10698568 ttgtgggcgcggttatggtgcataaggaaatccttgtgcaccctgcataaatc 10698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 4101964 - 4102011
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  4101964 gtggttatagtgcataaggaaatgtttatgcaccgtgcataaatccca 4102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 14237779 - 14237822
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  14237779 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 14237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 20522893 - 20522850
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  20522893 gtggttatggtgcataaggaaatccttatgcaccctacataaat 20522850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 22857720 - 22857677
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  22857720 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 22857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 25119513 - 25119470
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  25119513 ggttatggtgcataaggaaatccttatgcagcctgcataaatcc 25119470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 19281284 - 19281325
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  19281284 ggttatggtgcataaggaaatccttgtgcaccctgcataaat 19281325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 25119107 - 25119148
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  25119107 ggttatggtgcataaggaaattcttatgcaccctgcataaat 25119148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 28132824 - 28132783
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  28132824 gtggttatggtgcataaggatttccttatgcaccgtgcataa 28132783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 20522663 - 20522711
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||| |||||||||||||||||||||||  ||||||||| |||||||||    
T  20522663 tgggcgtggttatggtgcataaggaaatatttatgcaccctgcataaat 20522711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 34399648 - 34399680
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgt 322  Q
    |||||||||||||||||||||||||||||||||    
T  34399648 gttatggtgcataaggaaatccttatgcaccgt 34399680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 21384790 - 21384833
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||| | |||||||||||    
T  21384790 ggttatggtgcataaggaaattcttatgcatcctgcataaatcc 21384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 22030107 - 22030148
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  22030107 gtggttatggtgcataaggatttacttatgcaccgtgcataa 22030148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 24736574 - 24736607
Alignment:
Q  327 aaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||| |||||    
T  24736574 aaatcccaacataattgcttcctacacccccaaa 24736607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 24736610 - 24736643
Alignment:
Q  327 aaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||| |||||    
T  24736610 aaatcccaacataattgcttcctacacccccaaa 24736643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 29163752 - 29163719
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||| ||||||||||||||||||||    
T  29163752 tgcataaggaaattcttatgcaccgtgcataaat 29163719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 29157240 - 29157272
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||| ||||||||||||||||||||||||||||    
T  29157240 tgcacaaggaaatccttatgcaccgtgcataaa 29157272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 14394647 - 14394570
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14394647 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 14394570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 14940243 - 14940320
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14940243 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 14940320  T

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Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 26637723 - 26637795
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26637723 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 26637795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 37456861 - 37456782
Alignment:
Q  281 gtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  37456861 gtgggagtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 37456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 3883922 - 3883999
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  3883922 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacctccaaa 3883999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 15416843 - 15416773
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15416843 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacac 15416773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 30783637 - 30783560
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  30783637 tgggagtggttatgatgcataaggaaatccttatgcaccgtgcataaat-ccaacataattgcttcctacacccccaaa 30783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 13553163 - 13553091
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  13553163 tgggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacacc 13553091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 28069242 - 28069312
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 353  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacac 28069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 13363842 - 13363792
Alignment:
Q  284 ggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaatccca 13363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 11661025 - 11660982
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  11661025 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 11660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 13362777 - 13362816
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13362777 gttatggtgcataaggaaatccttatgcaccgtgcataaa 13362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 22695583 - 22695540
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22695583 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 22695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 23155524 - 23155567
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  23155524 gtggttatggtgcataaggaaatccttatgcaccctgcataaat 23155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 23334706 - 23334756
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  23334706 gggaatggttatggtgcataaggaaat-cttatgcaccgtgcataaatccca 23334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 25017275 - 25017236
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25017275 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 28070211 - 28070172
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28070211 gttatggtgcataaggaaatccttatgcaccgtgcataaa 28070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 39861823 - 39861780
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  39861823 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 39861780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 23948630 - 23948588
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgca 325  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  23948630 gggagtggttatggtgcataagaaaatccttatgcaccgtgca 23948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 3340591 - 3340632
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  3340591 ggttatggtgcataaggaaatccttatgcaccctgcataaat 3340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 15559050 - 15559091
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  15559050 ggttatggtgcataaggaaatccttatgcaccatgcataaat 15559091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 16667667 - 16667704
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16667667 tgcataaggaaatccttatgcaccgtgcataaatccca 16667704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 25189817 - 25189862
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  25189817 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 25189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 34330211 - 34330166
Alignment:
Q  307 aatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  34330211 aatccttatgcaccgtgcataaattccaacataattgcttcataca 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 20134200 - 20134243
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  20134200 ggttatggtgcataaggaaatccttatgcagcctgcataaatcc 20134243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 20134442 - 20134399
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  20134442 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 20134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 20696370 - 20696327
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  20696370 ggttatggtgcataaggaaatccttattcaccctgcataaatcc 20696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 22672040 - 22671997
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  22672040 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 22671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 23335765 - 23335726
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  23335765 gttatggtgcataaggaaatccgtatgcaccgtgcataaa 23335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 25671333 - 25671290
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||| ||| |||||||||    
T  25671333 gtggttatggtgcataaggaaatccttatgtaccatgcataaat 25671290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 34329134 - 34329173
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34329134 gttatggtgcataaggaaatctttatgcaccgtgcataaa 34329173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 35662068 - 35662111
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  35662068 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 35662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 35662276 - 35662233
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  35662276 ggttatggtgcataaggaaatacttatgcaccctgcataaatcc 35662233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 39861580 - 39861623
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||| ||||||||||||||||||||||| |||||||||||    
T  39861580 ggttatggggcataaggaaatccttatgcaccctgcataaatcc 39861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 22830830 - 22830788
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  22830830 gttatggtgcataaggaaatccttatgcacactgcataaatcc 22830788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 23155885 - 23155843
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  23155885 gttatggtgcataatgaaatccttatgcaccttgcataaatcc 23155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 5630312 - 5630271
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  5630312 ttatggtgcatgaggaaatccttatgcaccctgcataaatcc 5630271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 11660794 - 11660835
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  11660794 ggttatggtgcataaggaaatccttatgcaccctacataaat 11660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 16552248 - 16552289
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  16552248 ggttatggtgcataaggaaatccgtatgcaccctgcataaat 16552289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 39086518 - 39086559
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  39086518 ggttatggtgcataagaaaatccttatgcaccctgcataaat 39086559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 39166150 - 39166195
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||    
T  39166150 gtggttacggtgcataaggaaattcttatgcaccctgcataaatcc 39166195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 39166383 - 39166342
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  39166383 ggttatggtgcataagaaaatccttatgcaccctgcataaat 39166342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 703732 - 703772
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  703732 gttatggtgcataaggaaatccttatgcatcctgcataaat 703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 15059677 - 15059633
Alignment:
Q  289 ggttatggtgcataaggaaat-ccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  15059677 ggttatggtgcataaggaaatcccttatgcaccctgcataaatcc 15059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 7286996 - 7286954
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  7286996 ggttatggtgcataaggaa-tccttatgcaccctgcataaatcc 7286954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 320
Target Start/End: Complemental strand, 25545615 - 25545584
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcacc 320  Q
    ||||||||||||||||||||||||||||||||    
T  25545615 ggttatggtgcataaggaaatccttatgcacc 25545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 42746520 - 42746563
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||| | | |||||||||||    
T  42746520 ggttatggtgcataaggaaatccttatgaatcctgcataaatcc 42746563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 36864068 - 36864110
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||| |||||||||  ||||||||||    
T  36864068 ggttatggtgcataaggaaattcttatgcacactgcataaatc 36864110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 5411799 - 5411758
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  5411799 ggttatggtgcataaggaaattcttatgcacccttcataaat 5411758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 7286754 - 7286795
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||| ||||||||||| ||||||||| |||||||||    
T  7286754 ggttatggtgtataaggaaatctttatgcaccctgcataaat 7286795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 15559175 - 15559134
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||| |||||| | ||||||||||    
T  15559175 gttatggtgcataaggaaatccgtatgcatcctgcataaatc 15559134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 36864311 - 36864270
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  36864311 ggttatggtgtataaggaaatccttatgcactctgcataaat 36864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Complemental strand, 39086748 - 39086719
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcac 319  Q
    ||||||||||||||||||||||||||||||    
T  39086748 gttatggtgcataaggaaatccttatgcac 39086719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 9595867 - 9595944
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9595867 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 9595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 54379341 - 54379265
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaa 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54379341 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaa 54379265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 6097571 - 6097642
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6097571 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 6097642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 30947798 - 30947869
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947798 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 30947869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 3475293 - 3475363
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3475293 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 3475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 19284855 - 19284781
Alignment:
Q  278 tttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19284855 tttgggggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 19284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 9106446 - 9106369
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  9106446 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaa 9106369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 26662425 - 26662502
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  26662425 gggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaa 26662502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 50755234 - 50755164
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 50755164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 2941813 - 2941890
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  2941813 gggagtgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacacccccaaa 2941890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 10986531 - 10986462
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10986531 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 10986462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 19384376 - 19384453
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 19384453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 26960805 - 26960728
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26960805 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaa 26960728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 51361515 - 51361589
Alignment:
Q  280 tgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51361515 tgtgggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacacc 51361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 46237645 - 46237722
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||    
T  46237645 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcatactcccccaaa 46237722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 33413899 - 33413971
Alignment:
Q  283 gggagtggttatggtgcataaggaaatcc-ttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  33413899 gggagtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacacc 33413971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 47335216 - 47335134
Alignment:
Q  283 gggagtggttatggtgcataaggaaatcctt-----atgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||| |||||||||| |||||    
T  47335216 gggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaa 47335134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 8719186 - 8719133
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 336  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8719186 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9071073 - 9071020
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 336  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9071073 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 34562394 - 34562442
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34562394 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 34562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 31853207 - 31853164
Alignment:
Q  311 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 31853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 16276663 - 16276713
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  16276663 tgggagcggttatggtgcataaagaaatccttatgcaccgtgcataaatcc 16276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 41191403 - 41191452
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41191403 tgggagtggttatggtgcatagggaaattcttatgcaccgtgcataaatc 41191452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 8036801 - 8036844
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8036801 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 19385373 - 19385334
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19385373 gttatggtgcataaggaaatccttatgcaccgtgcataaa 19385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 36185948 - 36185905
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  36185948 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 50416481 - 50416524
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  50416481 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 50416607 - 50416564
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  50416607 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 51362496 - 51362457
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51362496 gttatggtgcataaggaaatccttatgcaccgtgcataaa 51362457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 12973999 - 12974056
Alignment:
Q  275 agttttgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||| |||| | |||||||||||||||||||||||||||||||| ||| |||||||    
T  12973999 agttttatgggcgcggttatggtgcataaggaaatccttatgcaccctgcctaaatcc 12974056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 17620734 - 17620771
Alignment:
Q  286 agtggttatggtgcataaggaaatccttatgcaccgtg 323  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17620734 agtggttatggtgcataaggaaatccttatgcaccgtg 17620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 47924408 - 47924367
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctgcataaatc 47924367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 8718108 - 8718148
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  8718108 gttatggtgcataaggaaatccttatgcaccgtacataaat 8718148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 9069995 - 9070035
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  9069995 gttatggtgcataaggaaatccttatgcaccgtacataaat 9070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 27446255 - 27446215
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  27446255 gttatggtgcataaggaaatccttatgcaccttgcataaat 27446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 8037032 - 8036989
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  8037032 ggttatggtgcatgaggaaatccttatgcaccctgcataaatcc 8036989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 12974233 - 12974191
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  12974233 ggttatggtgcataaggaaatccttatgcacc-tgcataaatcc 12974191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 16277472 - 16277433
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  16277472 gttatggtgcataaggaaatctttatgcaccgtgcataaa 16277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 19012605 - 19012562
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  19012605 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 19012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 36185727 - 36185770
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  36185727 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 36185770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 50754013 - 50754052
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  50754013 gttatggtacataaggaaatccttatgcaccgtgcataaa 50754052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 47225890 - 47225848
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  47225890 gttatggtgcataaggaaatccttatgtaccctgcataaatcc 47225848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 21175309 - 21175268
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  21175309 ttatggtgcatgaggaaatccttatgcaccctgcataaatcc 21175268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 23756332 - 23756295
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23756332 tgcataaggaaatccttatgcaccgtggataaatccca 23756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 40220833 - 40220788
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||    
T  40220833 gggagtggttatggtgcataaggattttcttatgcaccgtgcataa 40220788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 52987702 - 52987669
Alignment:
Q  296 gtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaa 52987669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 7045358 - 7045319
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  7045358 gttatggtgcataaggaaattcttatgcaccgtgtataaa 7045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 16653498 - 16653540
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  16653498 ggttatggtgcataaggaaattcttatgcacc-tgcataaatcc 16653540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 19012393 - 19012435
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  19012393 ggttatggtgcataaggaaattcttatgcacc-tgcataaatcc 19012435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 320
Target Start/End: Original strand, 27068533 - 27068564
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcacc 320  Q
    ||||||||||||||||||||||||||||||||    
T  27068533 ggttatggtgcataaggaaatccttatgcacc 27068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 30794857 - 30794892
Alignment:
Q  296 gtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30794857 gtgcataaggaaatccttatgcaccctgcataaatc 30794892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 38345281 - 38345324
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||    
T  38345281 ggttatggtgcataaagaaatctttatgcaccctgcataaatcc 38345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 47225761 - 47225804
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  47225761 ggttatggtgcataaacaaatccttatgcaccctgcataaatcc 47225804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 49053469 - 49053426
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  49053469 ggttatggtgcataaggaaatctttatccaccctgcataaatcc 49053426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 8054962 - 8055008
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||| ||  | ||||||||||||||||||    
T  8054962 tgggagtggttatggtgcataaagattttcttatgcaccgtgcataa 8055008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 23700137 - 23700100
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  23700137 tgcataaggaaatccttatgcatcgtggataaatccca 23700100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 23718592 - 23718555
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  23718592 tgcataaggaaatccttatgcatcgtggataaatccca 23718555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 23737048 - 23737011
Alignment:
Q  297 tgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  23737048 tgcataaggaaatccttatgcatcgtggataaatccca 23737011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 47729299 - 47729258
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||| ||||||||||||||||||||||||||| | |||||||    
T  47729299 ggttttggtgcataaggaaatccttatgcaccctacataaat 47729258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 47924163 - 47924209
Alignment:
Q  289 ggttatggtgcataaggaaa---tccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||   |||||||||||| |||||||||||    
T  47924163 ggttatggtgcataaggaaatattccttatgcaccctgcataaatcc 47924209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 49053227 - 49053267
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  49053227 gttatggtgcataaggaaattcttatgcacccggcataaat 49053267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 540 - 617
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  540 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaa 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 33863 - 33786
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33863 gggattggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 33786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 6555 - 6485
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccaccaaa 360  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaa 6485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 8333 - 8379
Alignment:
Q  308 atccttatgcaccgtgcataaatcccaacataattgcttcctacacc 354  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacacc 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 1291 - 1248
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  1291 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 23545 - 23588
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  23545 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 23588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 23776 - 23736
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  23776 ttatggtgcataaggaaatccttatgcaccctgcataaatc 23736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 25290 - 25251
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 28724 - 28673
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    ||||| ||||||||||||||||||||||||| |||||||||| |||||||||    
T  28724 gggagcggttatggtgcataaggaaatccttttgcaccgtgcttaaatccca 28673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 20974 - 21017
Alignment:
Q  285 gagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20974 gagtggttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 20478 - 20524
Alignment:
Q  282 tgggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||    
T  20478 tgggagtggttatggtgcataaggatttccttatgcaccgtgcataa 20524  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 33617 - 33659
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  33617 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 33659  T

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Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 33859 - 33817
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  33859 ggttatggtgcataaggaaattcttatgcacc-tgcataaatcc 33817  T

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Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 20163 - 20122
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20163 ggttatggtgcataaggaaatccttatgcaccctgcataaat 20122  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 51908 - 51949
Alignment:
Q  291 ttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 51949  T

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Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 202913 - 202958
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 334  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  202913 ggttatggtgcataaggaaatcattatgcaccgtgcacaaatccca 202958  T

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Target: scaffold0544 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 10733 - 10694
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10733 gttatggtgcataaggaaatccttatacaccgtgcataaa 10694  T

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Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 13620 - 13659
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 329  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13620 gttatggtgcataaggaaatccttatccaccgtgcataaa 13659  T

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Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 11248 - 11210
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  11248 gttatggtgcataaggaaatccttatgcactgtgcataa 11210  T

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Target: scaffold0455 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 10730 - 10689
Alignment:
Q  287 gtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  10730 gtggttatggtgcataaggatttccttatgcaccgtgcataa 10689  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 37528 - 37483
Alignment:
Q  283 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataa 328  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||    
T  37528 gggattggttatggtgcataaggatttccttatgcaccgtgcataa 37483  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 96001 - 96042
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 331  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  96001 gttatggtgcataagaaaatccttatgcaccctgcataaatc 96042  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 37634 - 37677
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    |||||| ||||||||||||||||||||||||| | |||||||||    
T  37634 ggttattgtgcataaggaaatccttatgcaccctacataaatcc 37677  T

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Target: scaffold0664 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 3196 - 3154
Alignment:
Q  290 gttatggtgcataaggaaatccttatgcaccgtgcataaatcc 332  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||    
T  3196 gttatcgtgcataaggaaatctttatgcaccctgcataaatcc 3154  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 80919 - 80869
Alignment:
Q  280 tgtgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    |||||| | |||||||||||||||| ||||||||||||||| |||| ||||    
T  80919 tgtgggtgcggttatggtgcataagaaaatccttatgcaccctgcaaaaat 80869  T

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Target: scaffold1450 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Original strand, 751 - 780
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgca 318  Q
    ||||||||||||||||||||||||||||||    
T  751 ggttatggtgcataaggaaatccttatgca 780  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 72745 - 72704
Alignment:
Q  289 ggttatggtgcataaggaaatccttatgcaccgtgcataaat 330  Q
    ||||||||||||||| |||||||||||||||  |||||||||    
T  72745 ggttatggtgcataacgaaatccttatgcactctgcataaat 72704  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 164098 - 164070
Alignment:
Q  292 tatggtgcataaggaaatccttatgcacc 320  Q
    |||||||||||||||||||||||||||||    
T  164098 tatggtgcataaggaaatccttatgcacc 164070  T

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