View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9483_low_7 (Length: 492)
Name: NF9483_low_7
Description: NF9483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9483_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 16 - 479
Target Start/End: Complemental strand, 38127614 - 38127151
Alignment:
| Q |
16 |
tgtttttcattatttacttatctttattggattcataggatcaagttatgatgcccagtttcagcagcattatttgcagagaagcttaatttttatagcc |
115 |
Q |
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| T |
38127614 |
tgtttttcattatttacttatctttattggattcataggatcaagttatgatgcccagtttcagcagcattatttgcagagaagcttaatttttatagcc |
38127515 |
T |
|
| Q |
116 |
tcatcaccaatggttctttttcttcccaatgttcacactttcttgcatgtgacttaaccctctccgctgaattgttcccagaaaccttaaaaattcaacc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38127514 |
tcatcaccaatggttctttttcttcccaatgttcacactttcttgcatgtgacttaaccctctccgctgaattgttcccagaaaccttaaaaattcaacc |
38127415 |
T |
|
| Q |
216 |
tggaaactcctagtgctaaagagagctacatttttaactatgtaattaataaatgaaacttaatttgattctgataacttaaaagattagtatcgcacgt |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38127414 |
tggaaactcctagtgctaaagagagctacatttttaactatgtaattaataaatgaaacttaatttgattctgataacttaaaagattagtatcgcacgt |
38127315 |
T |
|
| Q |
316 |
caaactaagacatatttgatgtttgagatctcacatcaattagtgatatgatcaaataagtggttgcttataggtgatagacagtctcaccttaaaagtc |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38127314 |
caaactaagacatatttgatgtttgagatctcacatcaattagtgatatgatcaaataagtggttgcttataggtgatagacagtctcaccttaaaagtc |
38127215 |
T |
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| Q |
416 |
agttttgtatgttaagttagactcaaatcaaattcaaagatttgattcagtctcctctgcagaa |
479 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38127214 |
agttttgtatgttaagttagactcaaatcaaattcaaagatttgattcagtctcctctgcagaa |
38127151 |
T |
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