View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9484_low_50 (Length: 293)

Name: NF9484_low_50
Description: NF9484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9484_low_50
NF9484_low_50
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-293)||(69795-70072)
[»] chr8 (8 HSPs)
chr8 (169-280)||(29414358-29414469)
chr8 (173-280)||(35393714-35393823)
chr8 (171-280)||(24068140-24068250)
chr8 (168-248)||(26415560-26415640)
chr8 (172-268)||(38585112-38585208)
chr8 (213-268)||(29543677-29543732)
chr8 (196-229)||(5686338-5686371)
chr8 (172-229)||(5718471-5718528)
[»] chr3 (9 HSPs)
chr3 (168-280)||(3169268-3169380)
chr3 (171-264)||(2671895-2671988)
chr3 (171-280)||(48897703-48897814)
chr3 (177-248)||(26442957-26443028)
chr3 (172-280)||(1632783-1632892)
chr3 (169-248)||(18271984-18272063)
chr3 (169-280)||(34905820-34905933)
chr3 (169-269)||(45852955-45853055)
chr3 (176-248)||(1714006-1714078)
[»] chr6 (7 HSPs)
chr6 (172-280)||(32871777-32871887)
chr6 (169-280)||(6784723-6784836)
chr6 (176-263)||(6519233-6519320)
chr6 (169-268)||(2130513-2130612)
chr6 (169-268)||(34713489-34713588)
chr6 (172-268)||(28867173-28867269)
chr6 (213-280)||(11301810-11301879)
[»] chr1 (13 HSPs)
chr1 (169-280)||(35413000-35413113)
chr1 (172-264)||(43537169-43537261)
chr1 (169-280)||(23906627-23906740)
chr1 (169-278)||(29657340-29657451)
chr1 (169-268)||(21540062-21540161)
chr1 (196-248)||(1062836-1062888)
chr1 (172-268)||(10061580-10061676)
chr1 (196-268)||(47996665-47996737)
chr1 (169-268)||(35149685-35149784)
chr1 (200-280)||(49313581-49313663)
chr1 (196-248)||(13085089-13085141)
chr1 (169-268)||(26469932-26470031)
chr1 (176-230)||(11470050-11470104)
[»] chr4 (16 HSPs)
chr4 (169-280)||(19482492-19482605)
chr4 (169-253)||(42504215-42504299)
chr4 (176-263)||(25817658-25817745)
chr4 (171-268)||(41485725-41485822)
chr4 (177-253)||(5288525-5288601)
chr4 (172-264)||(24060568-24060660)
chr4 (172-252)||(30220705-30220783)
chr4 (169-268)||(2765389-2765488)
chr4 (93-248)||(35364655-35364800)
chr4 (200-280)||(16528537-16528619)
chr4 (213-264)||(42108751-42108802)
chr4 (169-248)||(29065299-29065378)
chr4 (220-266)||(33883121-33883167)
chr4 (172-230)||(37762833-37762891)
chr4 (213-280)||(13218430-13218498)
chr4 (177-229)||(51304328-51304380)
[»] chr7 (12 HSPs)
chr7 (172-280)||(21882793-21882903)
chr7 (169-253)||(22631483-22631567)
chr7 (172-278)||(46297589-46297697)
chr7 (169-268)||(23730526-23730623)
chr7 (168-278)||(20125566-20125678)
chr7 (172-234)||(1985028-1985090)
chr7 (171-268)||(24250477-24250574)
chr7 (169-268)||(19511398-19511497)
chr7 (169-278)||(23611771-23611881)
chr7 (169-248)||(46413764-46413846)
chr7 (213-248)||(15127639-15127674)
chr7 (213-280)||(8123665-8123734)
[»] chr2 (15 HSPs)
chr2 (169-280)||(37714397-37714510)
chr2 (172-268)||(27407410-27407506)
chr2 (169-268)||(20142956-20143055)
chr2 (200-280)||(37899555-37899637)
chr2 (200-282)||(32976074-32976158)
chr2 (200-268)||(24183959-24184027)
chr2 (172-268)||(38320224-38320320)
chr2 (169-280)||(13716731-13716844)
chr2 (196-253)||(4434300-4434357)
chr2 (172-269)||(35457388-35457484)
chr2 (172-230)||(14131182-14131240)
chr2 (171-229)||(19945747-19945805)
chr2 (170-243)||(2895399-2895472)
chr2 (169-245)||(3167907-3167983)
chr2 (172-248)||(27007177-27007253)
[»] chr5 (9 HSPs)
chr5 (172-280)||(25493793-25493903)
chr5 (171-268)||(35875762-35875859)
chr5 (171-268)||(21259206-21259302)
chr5 (169-278)||(30700891-30701000)
chr5 (169-268)||(3040281-3040380)
chr5 (170-280)||(30071745-30071857)
chr5 (196-280)||(30735369-30735455)
chr5 (169-268)||(20359899-20360000)
chr5 (171-229)||(34280129-34280187)
[»] scaffold0122 (1 HSPs)
scaffold0122 (172-280)||(18608-18718)
[»] scaffold0194 (1 HSPs)
scaffold0194 (169-219)||(27130-27180)


Alignment Details
Target: scaffold0018 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 69795 - 70072
Alignment:
Q  19 ggcggaccgaaattcctattccacgcggtggaccacataggtgagcgcactacccacattcttgtagttagacctttggaaattgatagatgcagcgaga 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69795 ggcggaccgaaattcctattccacgcggtggaccgcataggtgagcgcactacccacattcttgtagttagacctttggaaattgatagatgcagcgaga 69894  T
Q  119 aaattatcacgaaaa-tatcccgatggtataattcctcaacacctttccttacctttccttaattacaccccattatttcccttgatttccggccaataa 217  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  69895 aaattatcacgaaaaatatcccgatggtataattcctcaacacctttccttacctttccttaattacaccccattatctcccttgatttccggccaataa 69994  T
Q  218 caaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctctagataaatagcattattctagacct 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||    
T  69995 caaatttaattggctgaaaccttttcttgatcaattttagataaaaactctctagataaataacattgttctagacct 70072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 29414469 - 29414358
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||||||||||| || ||||||  | ||||||||| |||| |||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  29414469 acctttccttaattaaacaccattaccttccttgattttcggcaaataacaaatttaattggctgagacattttcttgatcaatttttgataaaaactct 29414370  T
Q  269 agataaatagca 280  Q
    ||||||||||||    
T  29414369 agataaatagca 29414358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 35393823 - 35393714
Alignment:
Q  173 ttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctctag 270  Q
    |||||||||||||||||||||  ||||||||||| ||| |||||  ||||| |||||||| ||||  |||||||||||||| | ||||||||  ||||||    
T  35393823 ttccttaattacaccccattacctcccttgattttcggtcaatatgaaattcaattggcttaaactctttcttgatcaattcttgataaaaactctctag 35393724  T
Q  271 ataaatagca 280  Q
    ||||||||||    
T  35393723 ataaatagca 35393714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 24068140 - 24068250
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actct 268  Q
    |||||||||||||||| |||| |  ||| |||||||  ||| |||||||||||||||||||||| || |||||| |||||||| | |||||||   ||||    
T  24068140 ctttccttaattacacaccatcacctcctttgatttt-ggcaaataacaaatttaattggctgagactttttctcgatcaattcttgataaaatctctct 24068238  T
Q  269 agataaatagca 280  Q
    ||||||||||||    
T  24068239 agataaatagca 24068250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 26415640 - 26415560
Alignment:
Q  168 tacctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||||||||||||||||||  |||||| ||  || ||||||| | ||||| |||||||||||| ||| |||||||||||||    
T  26415640 tacctttccttaattacacatcattatctcttttaatttccgtcaaataataaatttaattggttgagaccttttcttgat 26415560  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 38585112 - 38585208
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||| |||||||||| | ||||  ||| |||||||||| | ||| ||||||||||||   |||||| |||||||||| |||| | ||||||||||||    
T  38585112 tttctttaattacacacaattacctcctttgatttccgccaaatgacaaatttaattaattgaaacattttcttgataaattcttgataaaaactct 38585208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 29543677 - 29543732
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||| ||| |  |||||||||| |||||| ||||||||||||    
T  29543677 aataacaaatttaattggttgagatattttcttgataaatttttgataaaaactct 29543732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 5686338 - 5686371
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattg 229  Q
    |||||||||||||||| |||||||||||||||||    
T  5686338 tcccttgatttccggcaaataacaaatttaattg 5686371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 5718471 - 5718528
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattg 229  Q
    ||||||||||||||| ||||||  | |||||||||||| | ||||| |||||||||||    
T  5718471 tttccttaattacacaccattaccttccttgatttccgacaaataataaatttaattg 5718528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 3169268 - 3169380
Alignment:
Q  168 tacctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactc 267  Q
    |||||||||||||||||||| |||||   ||||||||||||||||   |  |||||||||||||| |||||||||||||||||||| | |||||||||||    
T  3169268 tacctttccttaattacacctcattaccgcccttgatttccggccttcatgaaatttaattggcttaaaccttttcttgatcaattcttgataaaaactc 3169367  T
Q  268 tagataaatagca 280  Q
    |||||||||||||    
T  3169368 tagataaatagca 3169380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 2671988 - 2671895
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa 264  Q
    ||||||||||||||||  |||||| |||  |||||| | ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  2671988 ctttccttaattacacatcattatctcctctgattttcagccaataacaaatttaattggctgacaccttttcttgatcaattcttgataaaaa 2671895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 48897703 - 48897814
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actct 268  Q
    |||| ||||||||||| ||||||||||| ||||||| || | |||||||||||||| | |||||||| |||| ||||| |||| | |||||||   ||||    
T  48897703 cttttcttaattacacaccattatttccattgattttcgacaaataacaaatttaacttgctgaaacatttttttgattaattcttgataaaatctctct 48897802  T
Q  269 agataaatagca 280  Q
    ||||||||||||    
T  48897803 agataaatagca 48897814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 26443028 - 26442957
Alignment:
Q  177 ttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||||||||| ||||||  |||||||||||||| | |||||||||||||||||| ||| |||||||||||||    
T  26443028 ttaattacacaccattacctcccttgatttccgccaaataacaaatttaattggttgagaccttttcttgat 26442957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 1632892 - 1632783
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctcta 269  Q
    |||| |||||||||| ||||||  ||| ||||||||||   |||||||||||||||| | ||| || |||||||||| |||||| ||||||||  |||||    
T  1632892 tttctttaattacacaccattacctcctttgatttccgcaaaataacaaatttaattagttgagacattttcttgat-aatttttgataaaaattctcta 1632794  T
Q  270 gataaatagca 280  Q
    |||||||||||    
T  1632793 gataaatagca 1632783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 18271984 - 18272063
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    ||||||| |||||||||| ||||||  ||| |||||||||| | |||||||||||||||||| ||| |  ||||||||||    
T  18271984 acctttctttaattacacaccattacctccattgatttccgccaaataacaaatttaattggttgagatattttcttgat 18272063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 34905933 - 34905820
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaac--t 266  Q
    ||||||||||||||| ||  |||||  ||| |||||||  | | |||||||||||||| ||||||| || ||||||| ||||||| | ||||||| |  |    
T  34905933 acctttccttaattatacatcattacctcctttgatttttgacaaataacaaatttaactggctgagacattttcttaatcaattcttgataaaatctat 34905834  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  34905833 ctagataaatagca 34905820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 45852955 - 45853055
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||| ||||||||||   |||||| |||||||||| |  || ||||| |||||||||||| ||| || |||||||||| |||| | ||||||| ||||    
T  45852955 accttttcttaattacatatcattatctcccttgattgcaagcaaataataaatttaattggttgagactttttcttgattaattcttgataaaatctct 45853054  T
Q  269 a 269  Q
    |    
T  45853055 a 45853055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 1714006 - 1714078
Alignment:
Q  176 cttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||||||| || | ||||| |||||| ||||||| | |||||||||||||||||  |||||  ||||||||||    
T  1714006 cttaattatacacaattatctcccttaatttccgccaaataacaaatttaattgattgaaatattttcttgat 1714078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 32871777 - 32871887
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctcta 269  Q
    ||||||||||||||| | ||||  |||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||| | ||||||||  |||||    
T  32871777 tttccttaattacacactattacctcccttgatttccgtcaaataacaaatttaattggttgaaaccttttcttgataaattcttgataaaaactctcta 32871876  T
Q  270 gataaatagca 280  Q
    |||||||||||    
T  32871877 gataaatagca 32871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 6784723 - 6784836
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ct 266  Q
    |||||| ||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| | ||||||||  ||    
T  6784723 accttttcttaattacacaccattatctcccttgatttccgacaaataacaaatttaattggctgagatcttttattgataaattgttgataaaaactct 6784822  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  6784823 ctagataaatagca 6784836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 6519320 - 6519233
Alignment:
Q  176 cttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa 263  Q
    |||||||||||  |||||  ||| ||||||| |||| ||||||||||||||||| |||| || ||||||||||||||||| |||||||    
T  6519320 cttaattacacatcattacatcctttgattttcggcaaataacaaatttaattgactgagacattttcttgatcaatttttgataaaa 6519233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 2130513 - 2130612
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||| | || |  ||| |||||||||| | |||||||||||||||||| ||| |  |||||||||| ||||||  || ||||||||    
T  2130513 acctttccttaattacacacaatcacctcctttgatttccgccaaataacaaatttaattggttgagattttttcttgataaattttttattaaaactct 2130612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 34713588 - 34713489
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||| ||||| ||||| ||||||  ||||||||||| || | |||||||||||||||| | ||| ||  ||||||||| |||| | ||||||||||||    
T  34713588 accttttcttaaatacacaccattacatcccttgattttcgccaaataacaaatttaattagttgagacaatttcttgataaattcttgataaaaactct 34713489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 28867269 - 28867173
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||||||||||  | ||||  ||| |||||||||  | |||||||||||||||||  |||||| ||||||| ||||||| | ||||||| ||||    
T  28867269 tttccttaattacatactattacctcctttgatttccaacaaataacaaatttaattgattgaaactttttcttaatcaattcttgataaaatctct 28867173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 11301879 - 11301810
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctctagataaatagca 280  Q
    ||||||||||| ||||| |||| |||||||| ||||||||| | ||||||||  ||||| ||||||||||    
T  11301879 aataacaaattcaattgactgagaccttttcatgatcaattcttgataaaaattctctatataaatagca 11301810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 35413113 - 35413000
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ct 266  Q
    |||||||||||||||||| | ||||  |||||||||||||| | |||||||||||||||||| ||| ||||||||||||| |||| | ||||||||  ||    
T  35413113 acctttccttaattacacactattacctcccttgatttccgtcaaataacaaatttaattggttgagaccttttcttgataaattattgataaaaactct 35413014  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  35413013 ctagataaatagca 35413000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 43537169 - 43537261
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa 264  Q
    |||| |||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| | ||||||||    
T  43537169 tttctttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgagaccttttcttgattaattcttgataaaaa 43537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 23906627 - 23906740
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaac--t 266  Q
    ||||||| |||||||||| ||||||  || ||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||| |  |    
T  23906627 acctttctttaattacacaccattacctctcttgatttgtggcaaataacaaatttaattggctgaaactttttcttgatcaattcttgataaaaccttt 23906726  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  23906727 ctagataaatagca 23906740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 29657451 - 29657340
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--act 266  Q
    |||||||||||||||||   |||||  ||| ||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||| |||||||   ||    
T  29657451 acctttccttaattacatatcattacctcctttgattttcggcaaataacaaatttaattggttgagaccttttcttgaccaatttttgataaaatctct 29657352  T
Q  267 ctagataaatag 278  Q
    ||||||||||||    
T  29657351 ctagataaatag 29657340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 21540161 - 21540062
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||| ||||||||||  |||||| |||||| ||||||| | |||||||||||||||||||||| || |||||||||| | || | ||||||||||||    
T  21540161 acctttctttaattacacttcattatctcccttaatttccgccaaataacaaatttaattggctgagacattttcttgataatttcttgataaaaactct 21540062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 1062888 - 1062836
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1062888 tcccatgattttcggccaataacaaatttaattggctgaaacattttcttgat 1062836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 10061676 - 10061580
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||  |||||  |||||||||||| | | |||||||||||||||||| ||| || |||| ||||| |||| | ||||||||||||    
T  10061676 tttccttaattacacatcattacctcccttgatttctgtcaaataacaaatttaattggttgagacttttttttgataaattcttgataaaaactct 10061580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 47996737 - 47996665
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||| |||||| |||||||| ||||||||||| ||||||| |||| | |||||||||  ||||||||||||    
T  47996737 tcccttaatttccagccaataagaaatttaattgactgaaacattttttggatcaatttcggataaaaactct 47996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 35149685 - 35149784
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||||||||||| ||  |||||| |||||||||||  | | |||||||||||||||||| | | |  |||||||||| |||| | ||||||||||||    
T  35149685 acctttccttaattatacatcattatctcccttgatttatgtcaaataacaaatttaattggttaagatattttcttgataaattcttgataaaaactct 35149784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 49313663 - 49313581
Alignment:
Q  200 ttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactcta--gataaatagca 280  Q
    |||||||||| | ||||||||||||||||   ||| || ||||||||||||||| | |||||||||||||  |||||||||||    
T  49313663 ttgatttccgactaataacaaatttaattaattgagacattttcttgatcaattcttgataaaaactctatggataaatagca 49313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 13085089 - 13085141
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||||||||||||||| ||||||||||||||||| |||| |  ||||||||||    
T  13085089 tcccttgatttccggcaaataacaaatttaattgactgagatattttcttgat 13085141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 26470031 - 26469932
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||| ||||||| | | ||||||| |    ||||| |||||||||| | ||| || |||||||||| |||| | ||||||||||||    
T  26470031 acctttccttaattacacaccattatcttctttgattttcattaaataataaatttaatttgttgagacattttcttgataaattcttgataaaaactct 26469932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 11470104 - 11470050
Alignment:
Q  176 cttaattacaccccattatttcccttgatttccggccaataacaaatttaattgg 230  Q
    |||||||||||  |||||  |||||||||||||| | ||||||||||||||||||    
T  11470104 cttaattacacatcattacctcccttgatttccgccaaataacaaatttaattgg 11470050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 19482605 - 19482492
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaatt-ttagataaaa-act 266  Q
    |||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||  |||||||||| |||| ||| ||||||  ||    
T  19482605 acctttccttaattacacaccattacttcccttgatttccgccaaataacaaatttaattggttgaaaaattttcttgataaattcttaaataaaactct 19482506  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  19482505 ctagataaatagca 19482492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 42504215 - 42504299
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaatt 253  Q
    ||||||||||||||||||  |||||  |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  42504215 acctttccttaattacacatcattacctcccttgatttccggcaaataacaaatttaattggttgaaatcttttcttgatcaatt 42504299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 25817745 - 25817658
Alignment:
Q  176 cttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa 263  Q
    ||||||||||| ||||||  || ||||||||||| | |||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  25817745 cttaattacacaccattacctcacttgatttccgtcaaataacaaatttaattggctgagaccttttcttgatcaattcttgataaaa 25817658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 41485822 - 41485725
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||| ||||||||||||||||||  |||||| |||||| ||||  |  |||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  41485822 cttttcttaattacaccccattacctcccttaatttcctgccagcagaaaatttaattggcttaaaccttttcttgatcaattcttgataaaaactct 41485725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 5288601 - 5288525
Alignment:
Q  177 ttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaatt 253  Q
    |||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||| || ||||||| |||||||    
T  5288601 ttaattacacaccattatctcccttgatttacggcaaataacaaatttaattggctgagacattttcttaatcaatt 5288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 24060660 - 24060568
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa 264  Q
    ||||||||||||||| ||||||| ||||||||||||   |||||||||||||||||| ||| | || ||||||||||||||| | ||||||||    
T  24060660 tttccttaattacacaccattatctcccttgatttctaaccaataacaaatttaattagcttagacattttcttgatcaattcttgataaaaa 24060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 30220783 - 30220705
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaat 252  Q
    ||||||||||||||| ||| || | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  30220783 tttccttaattacacaccaatact-cccttgatttccggccaataacaaaattaattgg-tgaaaccttttcttgatcaat 30220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 2765389 - 2765488
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||| ||||||||||  |||||| |||| ||||||  |||||||||||||||||||||||| | |||||||||||||||| | |  |||||||||||    
T  2765389 acctttcattaattacacatcattatctcccatgatttttggccaataacaaatttaattggcttagaccttttcttgatcaactcttaataaaaactct 2765488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 248
Target Start/End: Complemental strand, 35364800 - 35364655
Alignment:
Q  93 tttggaaattgatagatgcagcgagaaaattatcacgaaaatatcccgatggtataattcctcaacacctttccttacctttccttaattacaccccatt 192  Q
    ||||| |||||||||||  ||| |||||| |||||||||||||||||||| ||||||||  |||||          | ||||||||||||| || | |||    
T  35364800 tttgggaattgatagatctagcaagaaaagtatcacgaaaatatcccgatagtataattattcaac----------atctttccttaattatactcaatt 35364711  T
Q  193 atttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
     | ||||||||||||| | ||||||||||||||||||| | ||||||||| |||||    
T  35364710 gtctcccttgatttccagtcaataacaaatttaattgggtcaaacctttttttgat 35364655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 16528619 - 16528537
Alignment:
Q  200 ttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actctagataaatagca 280  Q
    |||||||||| | |||||||||||||||||||||| ||||| | |||||||||| || ||||||   ||||||||||||||||    
T  16528619 ttgatttccgacaaataacaaatttaattggctgagaccttctattgatcaattctaaataaaatctctctagataaatagca 16528537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 42108751 - 42108802
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa 264  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  42108751 aataacaaatttaattggctgaaactttttcttgatcaattcttgataaaaa 42108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 29065299 - 29065378
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    ||||||| |||||||||| ||||||  ||| |||||||||| | |||||||||||||||||  ||| || ||||||||||    
T  29065299 acctttctttaattacacaccattacctccattgatttccgtcaaataacaaatttaattgattgagactttttcttgat 29065378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 33883167 - 33883121
Alignment:
Q  220 aatttaattggctgaaaccttttcttgatcaattttagataaaaact 266  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  33883167 aatttaattggcttaaacattttcttgatcaattcttgataaaaact 33883121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 37762891 - 37762833
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattgg 230  Q
    |||||||||||||||  |||||||||| |||| || || | ||||||||||||||||||    
T  37762891 tttccttaattacacatcattatttcctttgactttcgtcaaataacaaatttaattgg 37762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 13218498 - 13218430
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct-agataaatagca 280  Q
    ||||||||||||||||| | || |||||||||| || ||||||  ||||||||||| | ||||||||||    
T  13218498 aataacaaatttaattgaccgagaccttttcttaataaatttttaataaaaactctcaaataaatagca 13218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 51304328 - 51304380
Alignment:
Q  177 ttaattacaccccattatttcccttgatttccggccaataacaaatttaattg 229  Q
    |||||| ||| ||||||| ||| |||||||||| | |||||||||||||||||    
T  51304328 ttaattgcacgccattatctcctttgatttccgtcaaataacaaatttaattg 51304380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 21882793 - 21882903
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actcta 269  Q
    ||||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||| |  ||||||   |||||    
T  21882793 tttccttaattacacaccattacctcccttgatttccggcaaataacaaatttaattggctgagatcttttcttaatcaattcttcataaaatctctcta 21882892  T
Q  270 gataaatagca 280  Q
    |||||||||||    
T  21882893 gataaatagca 21882903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 22631567 - 22631483
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaatt 253  Q
    |||||||||||||||||| | ||||| ||| |||||||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  22631567 acctttccttaattacacactattatctcctttgatttccgacaaataacaaatttaattggctgagatcttttcttgatcaatt 22631483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 46297697 - 46297589
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctcta 269  Q
    ||||||||||||||| ||||||  ||||||||||| || | ||||||||||| || ||||||| || |||||||||| |||| | ||||||||  |||||    
T  46297697 tttccttaattacacaccattaactcccttgattttcgacaaataacaaattaaaatggctgagacattttcttgataaattcttgataaaaactctcta 46297598  T
Q  270 gataaatag 278  Q
    |||||||||    
T  46297597 gataaatag 46297589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 23730526 - 23730623
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||||  ||||  || ||||||||||| | |||||| ||||||||| |||||||| ||||||||||||||| | ||||||| ||||    
T  23730526 acctttccttaattacacc--attacctctcttgatttccgacaaataacgaatttaatttgctgaaacgttttcttgatcaattcttgataaaatctct 23730623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 20125678 - 20125566
Alignment:
Q  168 tacctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--ac 265  Q
    |||||||| |||||||||| ||||||| | | || ||||| | | | |||||||||||||||||||| || ||||||||||||||| | |||||||   |    
T  20125678 tacctttctttaattacacaccattatcttctttaatttctgacaagtaacaaatttaattggctgacacattttcttgatcaattcttgataaaacctc 20125579  T
Q  266 tctagataaatag 278  Q
    |||||||||||||    
T  20125578 tctagataaatag 20125566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 1985090 - 1985028
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctga 234  Q
    ||||||||||||||  ||||||  | |||||||||||||| ||||||||||||||||||||||    
T  1985090 tttccttaattacataccattaccttccttgatttccggcaaataacaaatttaattggctga 1985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 24250477 - 24250574
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||| ||||||||||  ||||||  |||||||||||||| | ||||||||||| |||||| | | | |||||||||||||||| | ||||||| ||||    
T  24250477 cttttcttaattacaaaccattacctcccttgatttccgacaaataacaaattaaattggataagatcttttcttgatcaattcttgataaaatctct 24250574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 19511497 - 19511398
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||| | | ||||| ||| |||||||||    ||||| |||||||||||||| |||| ||||||| ||||||| | ||||||| ||||    
T  19511497 acctttccttaattactcactattatctccattgatttccaaaaaataataaatttaattggctaaaactttttcttaatcaattcttgataaaatctct 19511398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 23611771 - 23611881
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ct 266  Q
    |||||| |||||||||| || ||||  || ||||||||||| | |||||||||||||||| | ||| || |||||||||| |||| |  |||||||  ||    
T  23611771 acctttacttaattacatcc-attacctctcttgatttccgtcaaataacaaatttaatttgttgagacattttcttgataaattcttaataaaaactct 23611869  T
Q  267 ctagataaatag 278  Q
    ||||||||||||    
T  23611870 ctagataaatag 23611881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 46413764 - 46413846
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccg---gccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    ||||||||||||||||||  |||||  ||||||||||||||    | |||||||||||||||||| ||| || ||||||||||    
T  46413764 acctttccttaattacacatcattacctcccttgatttccgccaccaaataacaaatttaattggttgagacattttcttgat 46413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 15127639 - 15127674
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgat 248  Q
    |||||||||||||||| |||||||||||||||||||    
T  15127639 aataacaaatttaatttgctgaaaccttttcttgat 15127674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 8123734 - 8123665
Alignment:
Q  213 aataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actctagataaatagca 280  Q
    ||||||||||||||||| |||| || |||||||||||||||   |||||||   ||||||||||||||||    
T  8123734 aataacaaatttaattgactgagacattttcttgatcaattcatgataaaatctctctagataaatagca 8123665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 37714510 - 37714397
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ct 266  Q
    |||||||||||||||||| ||||||| ||| |||||||||  | |||||||||||||||||| ||| ||||||||||||| |||  | ||||||||  ||    
T  37714510 acctttccttaattacacaccattatctcctttgatttccatcaaataacaaatttaattggttgataccttttcttgataaatcattgataaaaactct 37714411  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  37714410 ctagataaatagca 37714397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 27407506 - 27407410
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||  |||||| | |||||||||||||  |||||||||||||||||||||| | |||||||||||||||| | |||||| |||||    
T  27407506 tttccttaattacacagcattatcttccttgatttccggtaaataacaaatttaattggctgatatcttttcttgatcaattcttgataaacactct 27407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 20143055 - 20142956
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||||||||||||||  |||||  | |||||||||||| | ||||| |||||||||||| ||| || |||||||||| |||| | ||||||||||||    
T  20143055 acctttccttaattacacatcattaccttccttgatttccgccaaataataaatttaattggttgagactttttcttgataaattcttgataaaaactct 20142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 37899555 - 37899637
Alignment:
Q  200 ttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctctagataaatagca 280  Q
    ||||||| || | ||| |||||||||||||| ||||||||||||||||| |||||| ||||||||  ||||||||||||||||    
T  37899555 ttgattttcgacaaatcacaaatttaattggttgaaaccttttcttgataaatttttgataaaaactctctagataaatagca 37899637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 32976074 - 32976158
Alignment:
Q  200 ttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaa--actctagataaatagcatt 282  Q
    |||||||||| | |||||||||||||||||| ||| || ||||||||||||||| | |||||||   ||||||||||||||||||    
T  32976074 ttgatttccgacaaataacaaatttaattggttgagacattttcttgatcaattcttgataaaatctctctagataaatagcatt 32976158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 24184027 - 24183959
Alignment:
Q  200 ttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| |  |||||||||||    
T  24184027 ttgagttccggcaaataataaatttaattggctgaaaccttttcttgataaattatgaataaaaactct 24183959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 38320224 - 38320320
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||| ||||||  |||||  ||| |||||||||  | |||||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||    
T  38320224 tttccttatttacacatcattacctcctttgatttccaccaaataacaaatttaattggttgaaaacttttcttgataaattcttgataaaaactct 38320320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 13716731 - 13716844
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ct 266  Q
    |||||| ||||||||||| | ||||  ||| ||||||| || | ||| |||||||||||||| ||| || |||||||||| |||| | ||||||||  ||    
T  13716731 accttttcttaattacacactattacctcctttgattttcgccaaatcacaaatttaattggttgagactttttcttgataaattcttgataaaaactct 13716830  T
Q  267 ctagataaatagca 280  Q
    ||||||||||||||    
T  13716831 ctagataaatagca 13716844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 4434357 - 4434300
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaatt 253  Q
    ||||||||||| |||| ||||||||||||||||| |||  ||||||||||||||||||    
T  4434357 tcccttgattttcggcaaataacaaatttaattgactgggaccttttcttgatcaatt 4434300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 35457484 - 35457388
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactcta 269  Q
    ||||||||||||||| ||||||  ||| ||||||||||   ||||| |||||||||||  |||||||||||||| || |||| | |||||||||||||    
T  35457484 tttccttaattacacaccattacctcctttgatttccgctaaataataaatttaattgattgaaaccttttctt-ataaattcttgataaaaactcta 35457388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 14131240 - 14131182
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattgg 230  Q
    ||||||||||||||| ||||||| || ||||||||||| | ||||||| ||||||||||    
T  14131240 tttccttaattacacaccattatctcgcttgatttccgccaaataacagatttaattgg 14131182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 19945747 - 19945805
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattg 229  Q
    |||||||||||||||| ||||||  |||||| ||||||| | |||||||||||||||||    
T  19945747 ctttccttaattacacaccattacctcccttaatttccgtcaaataacaaatttaattg 19945805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 2895399 - 2895472
Alignment:
Q  170 cctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttc 243  Q
    |||||||||||||| | | |||||| |||||||||||  ||||||||| ||||||  || ||||||||||||||    
T  2895399 cctttccttaattatatctcattatctcccttgatttatggccaataagaaatttcgttcgctgaaaccttttc 2895472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 3167983 - 3167907
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttctt 245  Q
    ||||||| ||||||||||  |||||  | | |||||||||| | ||||| |||||||||||| ||| ||||||||||    
T  3167983 acctttctttaattacacatcattaccttctttgatttccgacaaataataaatttaattggttgagaccttttctt 3167907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 27007253 - 27007177
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgat 248  Q
    ||||||||| ||||| | ||||  |||||||||||||| | ||||||||||||| |||| ||| ||  |||||||||    
T  27007253 tttccttaaatacacactattacctcccttgatttccgccaaataacaaatttatttggttgagacaatttcttgat 27007177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 25493903 - 25493793
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaa--ctcta 269  Q
    ||||||||||||||| ||||||  ||| |||||||| | | || ||||||||||||||||||| || ||||||||||||||| | ||||||||  |||||    
T  25493903 tttccttaattacacaccattacctcctttgatttctgacaaagaacaaatttaattggctgagacattttcttgatcaattcttgataaaaactctcta 25493804  T
Q  270 gataaatagca 280  Q
    |||||||||||    
T  25493803 gataaatagca 25493793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 35875762 - 35875859
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||| |  |||||||||||||| |||||||| ||||||||||| | ||||||| ||||    
T  35875762 ctttccttaattacacctcattatctcccttaattttcggccaacatgaaatttaattggcttaaacctttccttgatcaattcttgataaaatctct 35875859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 21259302 - 21259206
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||| ||||  |||||||||||||| |||  |  |||||||||| ||| |||||||||||| ||||||| | ||||||||||||    
T  21259302 ctttccttaattacaccc-attacctcccttgatttccgtccagcatgaaatttaattagcttaaaccttttctttatcaattcttgataaaaactct 21259206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 30700891 - 30701000
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||| |||||||||||  |||||  |||||| |||| || | |||||||||||||||||  ||| || ||||||| ||  ||||| ||||||||||||    
T  30700891 accttttcttaattacacaacattacctcccttaattttcgtcaaataacaaatttaattgattgagacattttcttaatatatttttgataaaaactct 30700990  T
Q  269 agataaatag 278  Q
    ||||||||||    
T  30700991 agataaatag 30701000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 3040281 - 3040380
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactct 268  Q
    |||||||||||||||||| ||||||  ||||||||||| |  |  ||||||||||||||||  ||| || |||||||||| |||| | ||||||||||||    
T  3040281 acctttccttaattacacaccattacctcccttgattttcaccagataacaaatttaattgattgagacattttcttgataaattcttgataaaaactct 3040380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 280
Target Start/End: Complemental strand, 30071857 - 30071745
Alignment:
Q  170 cctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactc-- 267  Q
    |||||||| |||||||| ||| ||  | || ||||||||  | ||||| |||||||||||| ||| ||||||||||| | |||| |||||||||||||      
T  30071857 cctttcctcaattacacaccactaccttccatgatttccaacaaataataaatttaattggttgagaccttttcttgttaaattctagataaaaactctt 30071758  T
Q  268 tagataaatagca 280  Q
    |||||||||||||    
T  30071757 tagataaatagca 30071745  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 30735369 - 30735455
Alignment:
Q  196 tcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaac--tctagataaatagca 280  Q
    |||||||||||||| | |||||||||||||||||  ||| || ||||||||||  ||| |  ||||||||  |||||||||||||||    
T  30735369 tcccttgatttccgccaaataacaaatttaattgattgagacattttcttgatatattcttaataaaaactatctagataaatagca 30735455  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 20360000 - 20359899
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaat--aacaaatttaattggctgaaaccttttcttgatcaattttagataaaaact 266  Q
    ||||||| |||||||||| ||||||| ||| |||||||| ||  |||  |||| ||||||||| | || || ||||||||||||||| | ||||||| ||    
T  20360000 acctttctttaattacacaccattatctcctttgatttcaggaaaatttaacagatttaattgaccgagacattttcttgatcaattcttgataaaatct 20359901  T
Q  267 ct 268  Q
    ||    
T  20359900 ct 20359899  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 34280129 - 34280187
Alignment:
Q  171 ctttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattg 229  Q
    |||||||||||||||  ||||||| | |||| ||||||| | |||||||||||||||||    
T  34280129 ctttccttaattacataccattatcttccttaatttccgccaaataacaaatttaattg 34280187  T

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Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 18718 - 18608
Alignment:
Q  172 tttccttaattacaccccattatttcccttgatttccggccaataacaaatttaattggctgaaaccttttcttgatcaattttagataaaaactc--ta 269  Q
    ||||||||||||| | ||||||| |||||| |||| || | ||||||||||||||||| || | || ||||||||||||||| |  |||||| |||  ||    
T  18718 tttccttaattactcaccattatctcccttaattttcgacaaataacaaatttaattgactaagactttttcttgatcaattcttaataaaatctcttta 18619  T
Q  270 gataaatagca 280  Q
    |||||||||||    
T  18618 gataaatagca 18608  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 27130 - 27180
Alignment:
Q  169 acctttccttaattacaccccattatttcccttgatttccggccaataaca 219  Q
    |||||||||||||||||| | ||||| |||||||||||||| | |||||||    
T  27130 acctttccttaattacactctattatctcccttgatttccgccaaataaca 27180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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