View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9484_low_62 (Length: 246)

Name: NF9484_low_62
Description: NF9484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9484_low_62
NF9484_low_62
[»] chr8 (14 HSPs)
chr8 (93-228)||(38613622-38613757)
chr8 (1-96)||(6311097-6311192)
chr8 (1-94)||(7290117-7290211)
chr8 (17-93)||(36979184-36979258)
chr8 (1-72)||(39785014-39785086)
chr8 (17-93)||(30655448-30655521)
chr8 (1-93)||(4760277-4760366)
chr8 (1-72)||(25328468-25328540)
chr8 (16-102)||(10689358-10689442)
chr8 (1-93)||(18853370-18853457)
chr8 (16-93)||(18870775-18870849)
chr8 (17-57)||(33038023-33038063)
chr8 (7-72)||(35745213-35745280)
chr8 (19-95)||(19752609-19752683)
[»] chr5 (19 HSPs)
chr5 (1-94)||(1457352-1457446)
chr5 (1-93)||(27444771-27444864)
chr5 (1-93)||(27449615-27449708)
chr5 (1-93)||(43592080-43592173)
chr5 (1-93)||(43598525-43598618)
chr5 (1-93)||(43604017-43604110)
chr5 (1-93)||(43609509-43609602)
chr5 (4-76)||(30631227-30631299)
chr5 (1-72)||(28807765-28807837)
chr5 (1-72)||(15044512-15044581)
chr5 (28-93)||(31180079-31180142)
chr5 (7-72)||(37556820-37556887)
chr5 (7-72)||(37561642-37561709)
chr5 (37-93)||(38191983-38192036)
chr5 (37-93)||(38219208-38219261)
chr5 (7-72)||(2785197-2785264)
chr5 (7-72)||(31397189-31397256)
chr5 (7-72)||(31402046-31402113)
chr5 (37-93)||(35387474-35387527)
[»] chr4 (11 HSPs)
chr4 (1-94)||(51520257-51520351)
chr4 (1-72)||(9224597-9224668)
chr4 (1-72)||(9229384-9229455)
chr4 (6-72)||(45348013-45348079)
chr4 (6-72)||(45357492-45357558)
chr4 (1-94)||(56146902-56146996)
chr4 (1-72)||(3813846-3813918)
chr4 (1-72)||(18855549-18855621)
chr4 (1-72)||(5732486-5732556)
chr4 (19-93)||(29760449-29760521)
chr4 (17-93)||(24741748-24741821)
[»] chr7 (13 HSPs)
chr7 (1-72)||(24024518-24024589)
chr7 (1-72)||(12396735-12396806)
chr7 (1-72)||(12406155-12406226)
chr7 (1-72)||(4866553-4866624)
chr7 (1-72)||(31109773-31109844)
chr7 (1-95)||(2057763-2057854)
chr7 (1-72)||(19992135-19992207)
chr7 (16-93)||(20357763-20357837)
chr7 (1-72)||(21812429-21812501)
chr7 (14-93)||(1533654-1533730)
chr7 (16-93)||(21645818-21645892)
chr7 (18-93)||(2479148-2479221)
chr7 (18-97)||(47263485-47263562)
[»] chr6 (12 HSPs)
chr6 (1-72)||(22010887-22010958)
chr6 (1-72)||(6438324-6438395)
chr6 (1-72)||(11856795-11856866)
chr6 (1-72)||(14737767-14737838)
chr6 (1-72)||(14742626-14742697)
chr6 (6-72)||(28155766-28155832)
chr6 (10-72)||(28184325-28184388)
chr6 (20-93)||(5674987-5675057)
chr6 (16-93)||(30126010-30126084)
chr6 (7-72)||(6005239-6005306)
chr6 (7-72)||(33336140-33336207)
chr6 (18-93)||(31936398-31936470)
[»] chr2 (10 HSPs)
chr2 (1-72)||(44312814-44312885)
chr2 (1-72)||(32246607-32246679)
chr2 (17-95)||(11099143-11099219)
chr2 (1-72)||(39812178-39812250)
chr2 (1-93)||(14291295-14291383)
chr2 (7-72)||(19344243-19344309)
chr2 (7-72)||(19349101-19349167)
chr2 (1-93)||(9296603-9296691)
chr2 (37-93)||(25403443-25403496)
chr2 (37-93)||(25398305-25398358)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-72)||(35252-35323)
[»] chr3 (14 HSPs)
chr3 (1-72)||(22173385-22173456)
chr3 (1-95)||(7167049-7167140)
chr3 (1-72)||(18656256-18656326)
chr3 (16-93)||(2671802-2671876)
chr3 (1-93)||(40372997-40373085)
chr3 (1-93)||(8739266-8739354)
chr3 (1-93)||(9091504-9091592)
chr3 (1-72)||(8512037-8512110)
chr3 (1-72)||(8516917-8516990)
chr3 (7-72)||(2677284-2677351)
chr3 (20-94)||(8477170-8477242)
chr3 (1-93)||(28504056-28504145)
chr3 (15-72)||(2673136-2673195)
chr3 (7-72)||(10207755-10207822)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-72)||(34139-34211)
[»] chr1 (10 HSPs)
chr1 (1-72)||(41386571-41386643)
chr1 (1-72)||(25445280-25445352)
chr1 (1-72)||(39445322-39445394)
chr1 (1-72)||(44024063-44024135)
chr1 (8-72)||(1055209-1055274)
chr1 (1-72)||(41398060-41398132)
chr1 (1-54)||(43988656-43988709)
chr1 (1-57)||(24787569-24787624)
chr1 (37-93)||(19359079-19359132)
chr1 (37-93)||(24203001-24203054)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-72)||(9830-9902)
scaffold0355 (31-72)||(101-143)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-72)||(185-257)
[»] scaffold0978 (1 HSPs)
scaffold0978 (1-94)||(438-528)
[»] scaffold0479 (1 HSPs)
scaffold0479 (11-72)||(13171-13233)
[»] scaffold0197 (1 HSPs)
scaffold0197 (7-72)||(19361-19428)
[»] scaffold0028 (1 HSPs)
scaffold0028 (7-72)||(149152-149219)
[»] scaffold0188 (1 HSPs)
scaffold0188 (37-93)||(24278-24331)
[»] scaffold0087 (1 HSPs)
scaffold0087 (18-93)||(44174-44247)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 93 - 228
Target Start/End: Complemental strand, 38613757 - 38613622
Alignment:
Q  93 agaagcaaaattcagcagattcaaaccttggcaacggtgtttgtgcaatgtatttaagaccctgcaggtgaaaacggagattacaatgagtatcaagttt 192  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613757 agaagcaaaatcgagctgattcaaaccttggcaacggtgtttgtgcaatgtatttaagaccctgcaggtgaaaacggagattacaatgagtatcaagttt 38613658  T
Q  193 aaaattactcataattttgaaacctgggaccagaga 228  Q
    |||||||||||||||||||||| |||||||||||||    
T  38613657 aaaattactcataattttgaaagctgggaccagaga 38613622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6311192 - 6311097
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacagaa 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6311192 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggattcacaacagaa 6311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7290117 - 7290211
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaacag 94  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  7290117 tggagaccatttgttctcattgattaccactatctcttgctccacacatcaatgtttatttcattggtgtgagtttggaaccggattcacaacag 7290211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 36979258 - 36979184
Alignment:
Q  17 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||    
T  36979258 tcattgattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagtttcaaccggattcacaaca 36979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39785014 - 39785086
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  39785014 tggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 30655521 - 30655448
Alignment:
Q  17 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||||||||||||| ||||||||    
T  30655521 tcattgattaccactatctcttgctccacacatctttgt---tttcattggtgtgagtttcaaccggattcacaaca 30655448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4760277 - 4760366
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||| | ||||||||||||||||||| || |||||||||||| |||||  |||||||| ||||||||||||||||| ||||||||    
T  4760277 tggaaaccattt-tgctcattgattaccactatctctagctccacacatctttgtt--tttcattgatgtgagtttcaaccggattcacaaca 4760366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25328468 - 25328540
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||    
T  25328468 tggagaccatttgttctcattgattatcactatcacttgctccgcacatcattgatttatttcattgttgtga 25328540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 10689358 - 10689442
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacagaagcaaaa 102  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||| || ||||||| || |||||    
T  10689358 ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagtttcaaccgaaaacacaacacaatcaaaa 10689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18853370 - 18853457
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||  ||||| ||||||||||||| |||||||||||||||    ||| |||| ||||||||||||||||||||| ||||||||    
T  18853370 tggaaaccatttga-ctcatagattaccactatctcttgctccacacatc----tttgtttcgttggtgtgagtttcaaccggattcacaaca 18853457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 18870775 - 18870849
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||| |||||||| |||| ||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||    
T  18870775 ctcatagattaccattatctcttgctccacacatctttgttt---tcattggtgtgagtttcaaccggattcacaaca 18870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 33038023 - 33038063
Alignment:
Q  17 tcattgattaccactatcacttgctccacacatcattgttt 57  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  33038023 tcattgattaccactatctcttgctccacacatctttgttt 33038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 35745280 - 35745213
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  35745280 ccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 35745213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 19752609 - 19752683
Alignment:
Q  19 attgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacaga 95  Q
    |||||||||||||  |  |||||||||||||| |||||| |||||||||||||| |||  |||||| ||||||||||    
T  19752609 attgattaccacttccttttgctccacacatctttgttt-tttcattggtgtga-tttttaccggattcacaacaga 19752683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1457352 - 1457446
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaacag 94  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  1457352 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacag 1457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27444864 - 27444771
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  27444864 tggagaccatttgtactcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 27444771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27449708 - 27449615
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  27449708 tggagaccatttgtactcattgattaccactatctcttgctccacatatcattgtttatttcattggtgtgagtttggaaccggattcacaaca 27449615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43592173 - 43592080
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||  ||||||| ||||||||    
T  43592173 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattgatgtgactttggaaccggattcacaaca 43592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43598618 - 43598525
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  43598618 tggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43604110 - 43604017
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  43604110 tggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43604017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43609602 - 43609509
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaaca 93  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  43609602 tggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccggattcacaaca 43609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 30631299 - 30631227
Alignment:
Q  4 aaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt 76  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  30631299 aaaccatttgttctcatagattaccactatctcttgctccacacatcattgtttatttcatttgtgtgagttt 30631227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28807765 - 28807837
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28807765 tggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 28807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15044581 - 15044512
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||    
T  15044581 tggagaccatttgttctcattgattaccactatcacttgctctacacgtcattg--tatttcattggtgtga 15044512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 31180142 - 31180079
Alignment:
Q  28 cactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||    
T  31180142 cactatctcttgctccacacatcattgtta--ttcattggtgtgagtttcaaccggattcacaaca 31180079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37556820 - 37556887
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37556820 ccatttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37556887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 37561642 - 37561709
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37561642 ccatttgctctcatagattatcactatcacttgctccacacatctttggtttattatcattggtgtga 37561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 38192036 - 38191983
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||||||||||| ||||||||    
T  38192036 ttgctccacacatctttgttta---cattggtgtgagtttcaaccggattcacaaca 38191983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 38219261 - 38219208
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||||||||||| ||||||||    
T  38219261 ttgctccacacatctttgttta---cattggtgtgagtttcaaccggattcacaaca 38219208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2785264 - 2785197
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2785264 ccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 31397189 - 31397256
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31397189 ccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31397256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 31402046 - 31402113
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  31402046 ccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 31402113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 35387527 - 35387474
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  35387527 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 35387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 51520351 - 51520257
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaacag 94  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  51520351 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggattcacaacag 51520257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9224597 - 9224668
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9224597 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9224668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9229384 - 9229455
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9229384 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 45348013 - 45348079
Alignment:
Q  6 accatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45348013 accatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 45357492 - 45357558
Alignment:
Q  6 accatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357492 accatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45357558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 56146902 - 56146996
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagttt-caaccggaatcacaacag 94  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||    
T  56146902 tggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaatttggaaccggattcacaacag 56146996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3813918 - 3813846
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3813918 tggagaccatttgctctcattgattaccactatcacttgctccacacatcattggtttatttcattggtgtga 3813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18855621 - 18855549
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  18855621 tggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 18855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5732556 - 5732486
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  5732556 tggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtga 5732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 29760521 - 29760449
Alignment:
Q  19 attgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||    
T  29760521 attgattaccactatctcttgctccacacatctttgttt--ttcattggtgtgagtttcaaccggattcacaaca 29760449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 24741821 - 24741748
Alignment:
Q  17 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||||||||||||||||||| ||||||||    
T  24741821 tcattgattaccactatctcttgctccacacatctttgt---tttcattggtgtgagtttcaaccggattcacaaca 24741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24024518 - 24024589
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024518 tggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 24024589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12396806 - 12396735
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12396806 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 12396735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12406226 - 12406155
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12406226 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 12406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4866624 - 4866553
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4866624 tggagaccatttgtcctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 4866553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31109773 - 31109844
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31109773 tggagaccatttgttctcattgattatcactatcacttgctgcacacatcattgtttatttcattggtgtga 31109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2057854 - 2057763
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacaga 95  Q
    |||||||||||||  ||||| ||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||    
T  2057854 tggaaaccatttga-ctcatagattaccactatctcttgctccacacatctttgttt--ttcattggtgtgagtttcaaccggattcacaacaga 2057763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19992207 - 19992135
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||    
T  19992207 tggaagccatttgttctcattgattatcactatcacctgctccacacatctttggtttatttcattggtgtga 19992135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 20357763 - 20357837
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||    
T  20357763 ctcatagattaccactatctcttgctccacacatctttgttt---tcattggtgtgagtttcaaccggattcacaaca 20357837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21812429 - 21812501
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  21812429 tggaagccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 21812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 1533654 - 1533730
Alignment:
Q  14 ttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||||||||||||||||||   |||||||||||||| ||||   |||||||||||||||||| ||||||| ||||||||    
T  1533654 ttctcattgattaccactatattttgctccacacatctttgt---tttcattggtgtgagttttaaccggattcacaaca 1533730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 21645892 - 21645818
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||| ||||||||||  |  |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  21645892 ctcatagattaccactcccttttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 21645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 2479221 - 2479148
Alignment:
Q  18 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaa-tcacaaca 93  Q
    |||||||||||||| ||  |||||||||||||| ||||||  ||||||||||||| | |||||||||| ||||||||    
T  2479221 cattgattaccact-tcctttgctccacacatctttgttt--ttcattggtgtgattatcaaccggaactcacaaca 2479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 47263562 - 47263485
Alignment:
Q  18 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaa-tcacaacagaag 97  Q
    |||||||||||||| ||  ||||||||| |||| ||||||  ||||||||||||| | |||||||||| ||||||||||||    
T  47263562 cattgattaccact-tcctttgctccacgcatctttgttt--ttcattggtgtgattatcaaccggaactcacaacagaag 47263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22010887 - 22010958
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010887 tggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 22010958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6438395 - 6438324
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6438395 tggaagccattggttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 6438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11856866 - 11856795
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11856866 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 11856795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14737767 - 14737838
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14737767 tggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14737838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14742626 - 14742697
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14742626 tggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14742697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 28155766 - 28155832
Alignment:
Q  6 accatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28155766 accatttgctctcattgattatcactatcacttgctccacacatcattgtttattgcattggtgtga 28155832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 28184388 - 28184325
Alignment:
Q  10 tttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28184388 tttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 28184325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 5674987 - 5675057
Alignment:
Q  20 ttgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||||  |||||||||||||| ||||||   |||||||||||||||| ||||||| ||||||||    
T  5674987 ttgattaccactatcttttgctccacacatctttgttt---tcattggtgtgagttttaaccggattcacaaca 5675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 30126010 - 30126084
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||| ||||| ||||| | ||||||||||||||| ||||||   |||||||||||| ||||||||||| ||||||||    
T  30126010 ctcatagattatcactacctcttgctccacacatctttgttt---tcattggtgtgattttcaaccggattcacaaca 30126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 6005306 - 6005239
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  6005306 ccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 6005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 33336140 - 33336207
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  33336140 ccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 33336207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 31936470 - 31936398
Alignment:
Q  18 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||||||||||||  |  |||||||||||||| |||||  |||||||||||||| ||| ||||||| ||||||||    
T  31936470 cattgattaccacttccttttgctccacacatctttgtt--tttcattggtgtga-ttttaaccggattcacaaca 31936398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44312814 - 44312885
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312814 tggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 44312885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32246679 - 32246607
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32246679 tggagaccatttgttctcatagattaccactatcacttgctccacacatcattggtttatttcattggtgtga 32246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11099143 - 11099219
Alignment:
Q  17 tcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacaga 95  Q
    |||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||    
T  11099143 tcattgattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagtttcaaccggattcacaacaga 11099219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39812178 - 39812250
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  39812178 tggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14291383 - 14291295
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||| | | ||||||||||||||||| ||||||||||||| | ||||   |||||||||||||||||| ||||||| ||||||||    
T  14291383 tggaaaccattt-tgcccattgattaccactatctcttgctccacacacctttgt---tttcattggtgtgagttttaaccggattcacaaca 14291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 19344309 - 19344243
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19344309 ccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 19349167 - 19349101
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  19349167 ccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9296603 - 9296691
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||| | ||||| ||||||||||| |  |||||||||||||| ||||||   |||||||||||||||| ||||||| ||||||||    
T  9296603 tggaaaccattt-tgctcatagattaccactaccttttgctccacacatctttgttt---tcattggtgtgagttttaaccggattcacaaca 9296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 25403496 - 25403443
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||||||||||| ||||||||    
T  25403496 ttgctccacacatctttgttta---cattggtgtgagtttcaaccggattcacaaca 25403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 25398358 - 25398305
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   |||||||||||||||||||| || ||||||||    
T  25398358 ttgctccacacatctttgttta---cattggtgtgagtttcaaccagattcacaaca 25398305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 35252 - 35323
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35252 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22173385 - 22173456
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22173385 tggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 22173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7167140 - 7167049
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacaga 95  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||    
T  7167140 tggaaaccattt-tgctcatagattaccactatctcttgctccacacatctttgttt--ttcattggtgtgagtttcaaccggattcacaacaga 7167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18656326 - 18656256
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  18656326 tggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtat-tttcattggtgtga 18656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 2671802 - 2671876
Alignment:
Q  16 ctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    ||||| ||||||||||||| ||||||||||||||| ||||   |||||||||||||||||| ||||||| ||||||||    
T  2671802 ctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttttaaccggattcacaaca 2671876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40372997 - 40373085
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||| | | ||||||||||||||||| ||||||||||||| | ||||   |||||||||||||||||| ||||||| ||||||||    
T  40372997 tggaaaccattt-tgcccattgattaccactatctcttgctccacacacctttgt---tttcattggtgtgagttttaaccggattcacaaca 40373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8739266 - 8739354
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||  ||||| ||||||||||||  ||||||||||||||| ||||   |||||||||||||||| ||||||| | ||||||||    
T  8739266 tggaaaccatttga-ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagtctcaaccgaattcacaaca 8739354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9091504 - 9091592
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||  ||||| ||||||||||||  ||||||||||||||| ||||   |||||||||||||||| ||||||| | ||||||||    
T  9091504 tggaaaccatttga-ctcatagattaccactatttcttgctccacacatctttgt---tttcattggtgtgagtctcaaccgaattcacaaca 9091592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8512110 - 8512037
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    ||||| ||||||| |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8512110 tggaagccatttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8512037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8516990 - 8516917
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    ||||| ||||||| |||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  8516990 tggaagccatttgctctcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 8516917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 2677284 - 2677351
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    ||||||| |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2677284 ccatttgctctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2677351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 8477242 - 8477170
Alignment:
Q  20 ttgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttca-accggaatcacaacag 94  Q
    |||||||||||||||  |||||||||||||| ||||   |||||||||||||||||| | |||||| |||||||||    
T  8477242 ttgattaccactatcttttgctccacacatctttgt---tttcattggtgtgagttttataccggattcacaacag 8477170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28504056 - 28504145
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||| ||||||| ||||| ||||| |  ||||||||||||||||||||   ||||||||||||||||   |||||| ||||||||    
T  28504056 tggaaaccattt-ttctcatagattatcactaccttttgctccacacatcattgtt--attcattggtgtgagttaagaccggattcacaaca 28504145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 2673136 - 2673195
Alignment:
Q  15 tctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2673136 tctcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 2673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 10207822 - 10207755
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  10207822 ccatttgcactcatagattatctctatcacttgctccacacatcattggtttattctcattggtgtga 10207755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34139 - 34211
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34139 tggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 34211  T

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Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41386643 - 41386571
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  41386643 tggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 41386571  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25445280 - 25445352
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25445280 tggaagccatttgttctcattgattatcactatcgcttgctccacacatcattggtttatttcattggtgtga 25445352  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39445394 - 39445322
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  39445394 tggaagccatttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 39445322  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44024063 - 44024135
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  44024063 tggaagccatttgttctcattgattatcactatcagttgctccacacatcattggtttatttcattggtgtga 44024135  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 1055209 - 1055274
Alignment:
Q  8 catttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1055209 catttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 1055274  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41398132 - 41398060
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  41398132 tggagaccatatgttctcattgattatcactatcacttgctccacacataattggtttatttcattggtgtga 41398060  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43988656 - 43988709
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattg 54  Q
    ||||| ||||||| |||||| ||||| | |||||||||||||||||||||||||    
T  43988656 tggaagccatttgctctcatagattatctctatcacttgctccacacatcattg 43988709  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24787569 - 24787624
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgttt 57  Q
    |||||||||||| | |||||| |||||||||||| ||||||||||||||| ||||||    
T  24787569 tggaaaccattt-tgctcatttattaccactatctcttgctccacacatctttgttt 24787624  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 19359079 - 19359132
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  19359079 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 19359132  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 24203001 - 24203054
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| ||||||   |||||||||||||||| ||||||| ||||||||    
T  24203001 ttgctccacacatctttgttt---tcattggtgtgagttttaaccggattcacaaca 24203054  T

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Target: scaffold0355 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9830 - 9902
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  9830 tggagaccatttgctctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 9902  T

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Target: scaffold0355; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 101 - 143
Alignment:
Q  31 tatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  101 tatcacttgctccacacatcattggtttatttaattggtgtga 143  T

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Target: scaffold0464 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 257 - 185
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||    
T  257 tggaagccatttgttctcattgattatcaccatcacttgctccacacatctttggtttatttcattggtgtga 185  T

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Target: scaffold0978 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 438 - 528
Alignment:
Q  1 tggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaacag 94  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||   |||||||||||||||||| ||  ||| |||||||||    
T  438 tggaaaccatttttgctcatagattaccactatctcttgctccacacatctttgt---tttcattggtgtgagttttaaatggattcacaacag 528  T

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Target: scaffold0479 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 13233 - 13171
Alignment:
Q  11 ttgttctcattgattaccactatcacttgctccacacatcatt-gtttatttcattggtgtga 72  Q
    |||||||||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||    
T  13233 ttgttctcattgattatcactatcacttgctccacatatctttggtttatttcattggtgtga 13171  T

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Target: scaffold0197 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 19361 - 19428
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  19361 ccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 19428  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 149152 - 149219
Alignment:
Q  7 ccatttgttctcattgattaccactatcacttgctccacacatcattg-tttatt-tcattggtgtga 72  Q
    |||||||  ||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||||||||    
T  149152 ccatttgcactcatagattatctctatcacttgctccacacatcattgatttattctcattggtgtga 149219  T

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Target: scaffold0188 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 24278 - 24331
Alignment:
Q  37 ttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaatcacaaca 93  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||||| ||||||||    
T  24278 ttgctccacacatctttgttta---cattggtgtgagttttaaccggattcacaaca 24331  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 44174 - 44247
Alignment:
Q  18 cattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccggaa-tcacaaca 93  Q
    |||||||||||||| ||  |||||||||||||| ||||||  ||||||||||||| | |||||||||| ||||||||    
T  44174 cattgattaccact-tcctttgctccacacatctttgttt--ttcattggtgtgattatcaaccggaactcacaaca 44247  T

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