View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9486_high_20 (Length: 267)
Name: NF9486_high_20
Description: NF9486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9486_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 36963840 - 36963613
Alignment:
| Q |
32 |
ctttttcaggacagaggcaaatgaacgagttcataactttcaatgcaatgtactaattggatcccttgaatagagaaaatgtgaacttagatccaacgct |
131 |
Q |
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| T |
36963840 |
ctttttcaggacagaggcaaatgaatgagttcataactttcaatacaatgtactaattggatcccttgaatagagaaaatgtgaacttagatccaacgct |
36963741 |
T |
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| Q |
132 |
cttgctatacactgtatggaattgatgaatgtgtaagtgcgctgaaatacaatcttagaattgatttactcttttaattcttagattcattccagaaatt |
231 |
Q |
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| T |
36963740 |
cttgctatacactgtatggtattgatgaatgtgtaagtgcgctgaaatacaatcttagaattgatttactcttttaattcttagattcattccagaaatt |
36963641 |
T |
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| Q |
232 |
ctaaaagtatatacgaatgcagtattat |
259 |
Q |
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| T |
36963640 |
ctaaaagtatatacgaatgcagaattat |
36963613 |
T |
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