View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9488_low_11 (Length: 430)

Name: NF9488_low_11
Description: NF9488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9488_low_11
NF9488_low_11
[»] chr4 (66 HSPs)
chr4 (93-413)||(52963477-52963804)
chr4 (89-327)||(40792752-40792988)
chr4 (186-327)||(2310924-2311065)
chr4 (93-302)||(52241037-52241245)
chr4 (184-327)||(390218-390361)
chr4 (181-327)||(42871096-42871242)
chr4 (150-327)||(393575-393753)
chr4 (154-327)||(2312421-2312597)
chr4 (150-327)||(6348156-6348333)
chr4 (183-305)||(37882857-37882981)
chr4 (128-327)||(1829754-1829954)
chr4 (89-293)||(7708665-7708869)
chr4 (119-327)||(1587183-1587392)
chr4 (89-302)||(23203830-23204043)
chr4 (219-336)||(24426331-24426448)
chr4 (204-327)||(4128994-4129117)
chr4 (128-327)||(42810118-42810318)
chr4 (178-327)||(1188844-1188994)
chr4 (154-305)||(11968534-11968687)
chr4 (114-302)||(53435654-53435843)
chr4 (115-327)||(1794412-1794627)
chr4 (119-315)||(13533168-13533363)
chr4 (154-327)||(27850878-27851047)
chr4 (178-305)||(44503644-44503771)
chr4 (154-327)||(52239878-52240053)
chr4 (201-327)||(4871352-4871479)
chr4 (178-327)||(11438533-11438683)
chr4 (217-327)||(44501519-44501629)
chr4 (152-326)||(6349490-6349667)
chr4 (153-302)||(13165522-13165671)
chr4 (218-312)||(54485551-54485645)
chr4 (218-327)||(1190198-1190307)
chr4 (163-327)||(1588037-1588204)
chr4 (89-202)||(2311080-2311192)
chr4 (120-302)||(10168689-10168873)
chr4 (182-305)||(27847701-27847824)
chr4 (154-327)||(15450015-15450190)
chr4 (221-327)||(42872308-42872414)
chr4 (218-327)||(49344015-49344125)
chr4 (218-327)||(1831269-1831378)
chr4 (218-327)||(31968398-31968507)
chr4 (178-302)||(53432088-53432213)
chr4 (218-306)||(53204383-53204471)
chr4 (219-327)||(55764342-55764450)
chr4 (200-327)||(31965836-31965963)
chr4 (181-327)||(53205451-53205598)
chr4 (178-292)||(33232664-33232777)
chr4 (154-302)||(7707614-7707765)
chr4 (178-327)||(37884243-37884392)
chr4 (219-327)||(55828786-55828894)
chr4 (178-236)||(13166734-13166793)
chr4 (187-304)||(54484336-54484455)
chr4 (154-292)||(40723264-40723402)
chr4 (184-260)||(5591421-5591498)
chr4 (184-260)||(48126872-48126949)
chr4 (178-299)||(50548190-50548310)
chr4 (193-302)||(54866612-54866720)
chr4 (153-232)||(4714116-4714196)
chr4 (153-260)||(22069303-22069411)
chr4 (161-304)||(49342643-49342787)
chr4 (156-302)||(33231415-33231563)
chr4 (154-217)||(44498573-44498636)
chr4 (218-302)||(10167451-10167535)
chr4 (154-218)||(56085458-56085522)
chr4 (187-302)||(54865131-54865245)
chr4 (218-302)||(50546932-50547016)
[»] chr3 (57 HSPs)
chr3 (89-327)||(40244188-40244425)
chr3 (89-327)||(34818087-34818325)
chr3 (89-327)||(38240907-38241144)
chr3 (89-302)||(27837946-27838158)
chr3 (89-302)||(35372036-35372248)
chr3 (89-303)||(40745343-40745557)
chr3 (119-327)||(53624269-53624476)
chr3 (130-293)||(10730920-10731083)
chr3 (128-305)||(18197170-18197340)
chr3 (94-302)||(26887437-26887645)
chr3 (156-305)||(38242458-38242609)
chr3 (133-314)||(53420330-53420513)
chr3 (220-327)||(37736089-37736196)
chr3 (217-327)||(18458662-18458772)
chr3 (217-327)||(37735307-37735417)
chr3 (89-302)||(41263664-41263877)
chr3 (180-304)||(53194837-53194962)
chr3 (187-321)||(50810808-50810943)
chr3 (187-321)||(50864921-50865056)
chr3 (156-327)||(3208485-3208658)
chr3 (178-325)||(18442255-18442399)
chr3 (178-325)||(19487329-19487473)
chr3 (178-327)||(40364320-40364470)
chr3 (119-327)||(42684880-42685086)
chr3 (89-302)||(53612897-53613101)
chr3 (89-205)||(3209843-3209959)
chr3 (187-321)||(50809428-50809563)
chr3 (187-321)||(50866299-50866434)
chr3 (178-315)||(20288189-20288327)
chr3 (218-327)||(36176512-36176622)
chr3 (152-327)||(12107917-12108098)
chr3 (183-327)||(24403240-24403385)
chr3 (218-327)||(53187560-53187668)
chr3 (181-285)||(36175306-36175410)
chr3 (154-315)||(3455565-3455728)
chr3 (218-327)||(41544663-41544772)
chr3 (218-307)||(53421767-53421856)
chr3 (154-327)||(34819225-34819399)
chr3 (217-302)||(41264658-41264743)
chr3 (178-257)||(20336622-20336702)
chr3 (150-273)||(12106629-12106752)
chr3 (154-312)||(28909548-28909705)
chr3 (265-332)||(55328358-55328425)
chr3 (89-174)||(42592693-42592778)
chr3 (265-317)||(8796366-8796418)
chr3 (186-257)||(20314737-20314809)
chr3 (265-327)||(3209984-3210046)
chr3 (282-336)||(8795932-8795986)
chr3 (150-327)||(23443394-23443572)
chr3 (192-302)||(26886298-26886407)
chr3 (219-287)||(3807980-3808048)
chr3 (154-302)||(53614213-53614363)
chr3 (265-305)||(12105313-12105353)
chr3 (218-322)||(38247482-38247586)
chr3 (128-196)||(43346365-43346433)
chr3 (219-287)||(44182323-44182391)
chr3 (171-290)||(53622700-53622822)
[»] chr7 (52 HSPs)
chr7 (89-327)||(43459456-43459694)
chr7 (89-327)||(32256273-32256510)
chr7 (128-327)||(47454338-47454537)
chr7 (89-315)||(11501193-11501419)
chr7 (89-242)||(22337248-22337401)
chr7 (93-302)||(22538729-22538938)
chr7 (93-320)||(41079716-41079942)
chr7 (129-327)||(6173369-6173565)
chr7 (141-307)||(47060404-47060570)
chr7 (150-327)||(47456320-47456490)
chr7 (136-327)||(40509658-40509849)
chr7 (217-327)||(32602934-32603044)
chr7 (93-302)||(40812491-40812703)
chr7 (200-332)||(45455360-45455492)
chr7 (218-317)||(30333296-30333395)
chr7 (181-327)||(40508379-40508526)
chr7 (136-327)||(4299972-4300163)
chr7 (150-327)||(47059109-47059288)
chr7 (136-305)||(22115088-22115257)
chr7 (180-336)||(30310113-30310270)
chr7 (119-315)||(9662144-9662339)
chr7 (162-327)||(33779036-33779199)
chr7 (119-315)||(3413545-3413742)
chr7 (154-305)||(43460763-43460916)
chr7 (182-312)||(11344523-11344651)
chr7 (89-302)||(13562848-13563052)
chr7 (218-327)||(30311475-30311584)
chr7 (218-327)||(45454039-45454148)
chr7 (154-305)||(32255012-32255166)
chr7 (219-321)||(30334648-30334746)
chr7 (218-327)||(33096870-33096979)
chr7 (181-327)||(24282944-24283090)
chr7 (218-327)||(4298714-4298823)
chr7 (154-302)||(13564179-13564329)
chr7 (154-302)||(22336005-22336155)
chr7 (154-315)||(11502361-11502525)
chr7 (218-311)||(24281091-24281185)
chr7 (171-217)||(15992247-15992293)
chr7 (187-295)||(22690400-22690509)
chr7 (218-312)||(3414840-3414934)
chr7 (190-259)||(24844330-24844399)
chr7 (274-327)||(40811341-40811394)
chr7 (119-211)||(669295-669386)
chr7 (192-292)||(22537595-22537694)
chr7 (200-302)||(25533214-25533317)
chr7 (217-327)||(35664286-35664396)
chr7 (218-315)||(40738844-40738942)
chr7 (132-210)||(44554687-44554764)
chr7 (217-327)||(46835676-46835786)
chr7 (154-211)||(2414863-2414920)
chr7 (154-214)||(39981431-39981492)
chr7 (169-213)||(16755987-16756031)
[»] chr8 (54 HSPs)
chr8 (89-323)||(45279685-45279919)
chr8 (89-327)||(41629709-41629947)
chr8 (93-302)||(42099987-42100196)
chr8 (89-327)||(32797139-32797380)
chr8 (89-327)||(32693831-32694069)
chr8 (89-302)||(13116356-13116569)
chr8 (119-327)||(30786677-30786887)
chr8 (119-327)||(6397784-6397992)
chr8 (154-336)||(42872131-42872313)
chr8 (133-327)||(8571536-8571732)
chr8 (154-327)||(32798472-32798647)
chr8 (154-327)||(32695214-32695390)
chr8 (119-305)||(22551030-22551216)
chr8 (218-327)||(8570119-8570228)
chr8 (119-327)||(42870814-42871025)
chr8 (113-327)||(44076261-44076478)
chr8 (218-327)||(26696533-26696642)
chr8 (154-302)||(42877645-42877793)
chr8 (200-327)||(4810470-4810597)
chr8 (199-321)||(28418813-28418936)
chr8 (187-321)||(28420148-28420283)
chr8 (128-305)||(30787516-30787693)
chr8 (182-302)||(17338067-17338187)
chr8 (200-336)||(6398485-6398622)
chr8 (154-302)||(42098589-42098739)
chr8 (218-306)||(211617-211705)
chr8 (218-306)||(240551-240639)
chr8 (218-306)||(725240-725328)
chr8 (218-306)||(793906-793994)
chr8 (154-315)||(38696321-38696483)
chr8 (181-316)||(17702241-17702379)
chr8 (193-302)||(17339530-17339639)
chr8 (218-327)||(41630130-41630239)
chr8 (185-327)||(212684-212827)
chr8 (185-327)||(239427-239570)
chr8 (185-327)||(726307-726450)
chr8 (185-327)||(792782-792925)
chr8 (185-327)||(798808-798951)
chr8 (232-327)||(13197961-13198056)
chr8 (178-292)||(26697798-26697912)
chr8 (178-308)||(41742087-41742217)
chr8 (201-327)||(45281178-45281303)
chr8 (154-218)||(10669386-10669450)
chr8 (154-218)||(24192604-24192668)
chr8 (218-302)||(13117639-13117723)
chr8 (184-315)||(41743586-41743718)
chr8 (200-307)||(45437469-45437577)
chr8 (154-212)||(17455164-17455222)
chr8 (218-288)||(29103527-29103597)
chr8 (241-327)||(34504669-34504755)
chr8 (154-215)||(42362691-42362752)
chr8 (217-297)||(29104370-29104450)
chr8 (219-287)||(37400839-37400907)
chr8 (279-315)||(42878883-42878919)
[»] chr2 (38 HSPs)
chr2 (89-327)||(32470452-32470690)
chr2 (89-327)||(17460571-17460799)
chr2 (89-257)||(6028787-6028956)
chr2 (150-327)||(11315934-11316111)
chr2 (156-327)||(43033083-43033254)
chr2 (89-302)||(1083014-1083227)
chr2 (180-327)||(17459254-17459404)
chr2 (154-327)||(43034411-43034586)
chr2 (180-327)||(28561369-28561518)
chr2 (154-327)||(11317308-11317483)
chr2 (119-327)||(28562716-28562924)
chr2 (218-305)||(7437767-7437854)
chr2 (200-327)||(11547660-11547787)
chr2 (154-315)||(18616945-18617109)
chr2 (154-315)||(29219398-29219562)
chr2 (154-315)||(29332697-29332861)
chr2 (89-302)||(18615542-18615746)
chr2 (133-315)||(34512827-34513008)
chr2 (133-315)||(34463981-34464164)
chr2 (224-327)||(36010578-36010681)
chr2 (217-332)||(36011647-36011761)
chr2 (178-315)||(21664816-21664953)
chr2 (89-302)||(29220762-29220966)
chr2 (89-302)||(29334061-29334265)
chr2 (178-326)||(7436469-7436616)
chr2 (200-327)||(6030458-6030585)
chr2 (92-242)||(6032193-6032344)
chr2 (186-315)||(35903521-35903651)
chr2 (218-327)||(42641867-42641975)
chr2 (178-305)||(2277434-2277562)
chr2 (218-327)||(32469149-32469259)
chr2 (217-302)||(34468984-34469069)
chr2 (279-327)||(6028746-6028794)
chr2 (178-305)||(34147159-34147287)
chr2 (181-306)||(12359647-12359773)
chr2 (218-302)||(1085394-1085476)
chr2 (154-213)||(16295158-16295217)
chr2 (133-205)||(34467630-34467702)
[»] chr5 (33 HSPs)
chr5 (119-327)||(325092-325300)
chr5 (89-327)||(39605345-39605584)
chr5 (89-327)||(30857801-30858030)
chr5 (89-302)||(30912039-30912252)
chr5 (154-327)||(39603854-39604030)
chr5 (156-327)||(22047733-22047907)
chr5 (154-305)||(27705256-27705409)
chr5 (154-327)||(30859111-30859287)
chr5 (187-327)||(22049111-22049251)
chr5 (135-315)||(22308721-22308902)
chr5 (154-315)||(8521268-8521429)
chr5 (162-315)||(1010314-1010467)
chr5 (154-302)||(30910767-30910918)
chr5 (89-327)||(11263576-11263811)
chr5 (119-302)||(33173865-33174050)
chr5 (200-315)||(8523734-8523849)
chr5 (178-305)||(32757848-32757976)
chr5 (265-327)||(11262257-11262319)
chr5 (269-327)||(41798004-41798062)
chr5 (218-327)||(34894150-34894259)
chr5 (200-327)||(15548241-15548365)
chr5 (218-321)||(24503191-24503294)
chr5 (224-327)||(34898963-34899066)
chr5 (154-216)||(1102731-1102793)
chr5 (221-327)||(15941275-15941380)
chr5 (150-214)||(324153-324218)
chr5 (218-315)||(22307521-22307618)
chr5 (131-211)||(35081355-35081435)
chr5 (244-315)||(26047826-26047897)
chr5 (154-307)||(1009205-1009360)
chr5 (178-212)||(9220425-9220459)
chr5 (265-315)||(20538066-20538116)
chr5 (218-292)||(24509042-24509116)
[»] scaffold0077 (2 HSPs)
scaffold0077 (89-324)||(52596-52831)
scaffold0077 (154-327)||(54124-54300)
[»] scaffold0034 (2 HSPs)
scaffold0034 (89-327)||(109622-109860)
scaffold0034 (154-327)||(108514-108689)
[»] chr1 (49 HSPs)
chr1 (89-315)||(16963847-16964073)
chr1 (161-336)||(15072738-15072914)
chr1 (119-273)||(46110337-46110491)
chr1 (153-327)||(23091352-23091528)
chr1 (128-305)||(27814315-27814493)
chr1 (89-302)||(15233919-15234131)
chr1 (178-315)||(24499621-24499758)
chr1 (93-302)||(49802777-49802985)
chr1 (156-327)||(14470857-14471029)
chr1 (201-327)||(45584998-45585124)
chr1 (218-327)||(15071343-15071452)
chr1 (119-327)||(50444605-50444813)
chr1 (178-327)||(52628839-52628988)
chr1 (128-327)||(14477706-14477906)
chr1 (178-326)||(44276124-44276272)
chr1 (203-327)||(46111479-46111603)
chr1 (150-327)||(16123288-16123466)
chr1 (222-307)||(44278359-44278444)
chr1 (141-306)||(35943375-35943541)
chr1 (119-327)||(41873877-41874086)
chr1 (115-315)||(15746669-15746869)
chr1 (128-327)||(41872577-41872777)
chr1 (200-305)||(50442647-50442753)
chr1 (180-315)||(51042310-51042445)
chr1 (224-327)||(34351968-34352071)
chr1 (219-327)||(52627516-52627625)
chr1 (169-316)||(46467158-46467306)
chr1 (154-302)||(15232778-15232928)
chr1 (154-312)||(48096973-48097131)
chr1 (128-294)||(30535585-30535751)
chr1 (181-315)||(46318585-46318720)
chr1 (279-327)||(35942238-35942286)
chr1 (192-292)||(49801653-49801752)
chr1 (265-327)||(33369248-33369310)
chr1 (161-218)||(3617445-3617502)
chr1 (154-211)||(9226156-9226213)
chr1 (171-315)||(18821697-18821842)
chr1 (265-325)||(836246-836306)
chr1 (265-324)||(835249-835308)
chr1 (150-213)||(16757461-16757524)
chr1 (232-315)||(42244644-42244727)
chr1 (178-300)||(10376574-10376695)
chr1 (121-211)||(10722284-10722374)
chr1 (125-167)||(22766735-22766777)
chr1 (154-212)||(48527651-48527709)
chr1 (181-210)||(836176-836205)
chr1 (187-315)||(15743289-15743418)
chr1 (178-242)||(44999427-44999492)
chr1 (119-211)||(12665909-12666000)
[»] chr6 (25 HSPs)
chr6 (159-336)||(7310268-7310445)
chr6 (89-302)||(23397231-23397444)
chr6 (89-302)||(29380217-29380430)
chr6 (92-302)||(17839019-17839229)
chr6 (218-327)||(6452517-6452626)
chr6 (154-315)||(12669736-12669898)
chr6 (150-302)||(5186594-5186745)
chr6 (213-327)||(6452285-6452399)
chr6 (187-321)||(232183-232316)
chr6 (217-329)||(27080923-27081035)
chr6 (171-302)||(32506984-32507116)
chr6 (221-327)||(34024073-34024178)
chr6 (193-302)||(6702852-6702960)
chr6 (156-327)||(7311667-7311839)
chr6 (232-327)||(34023887-34023982)
chr6 (192-302)||(18346731-18346840)
chr6 (154-302)||(23392240-23392390)
chr6 (187-321)||(233543-233673)
chr6 (217-327)||(27967054-27967164)
chr6 (154-302)||(5187562-5187712)
chr6 (218-302)||(2687930-2688014)
chr6 (182-302)||(6701406-6701526)
chr6 (218-302)||(2687256-2687340)
chr6 (154-211)||(11967334-11967391)
chr6 (219-327)||(15730036-15730145)
[»] scaffold0031 (2 HSPs)
scaffold0031 (154-327)||(123970-124143)
scaffold0031 (141-336)||(125159-125357)
[»] scaffold0019 (2 HSPs)
scaffold0019 (119-315)||(63037-63234)
scaffold0019 (216-315)||(61864-61963)
[»] scaffold2071 (1 HSPs)
scaffold2071 (119-315)||(587-784)
[»] scaffold1152 (1 HSPs)
scaffold1152 (93-292)||(2365-2556)
[»] scaffold0078 (1 HSPs)
scaffold0078 (218-327)||(18813-18922)
[»] scaffold0011 (1 HSPs)
scaffold0011 (154-315)||(127446-127608)
[»] scaffold0118 (2 HSPs)
scaffold0118 (154-305)||(43514-43668)
scaffold0118 (229-277)||(42458-42506)
[»] scaffold0013 (1 HSPs)
scaffold0013 (154-315)||(32585-32745)
[»] scaffold0201 (1 HSPs)
scaffold0201 (119-292)||(21163-21337)
[»] scaffold1251 (1 HSPs)
scaffold1251 (178-305)||(1050-1178)
[»] scaffold0472 (1 HSPs)
scaffold0472 (200-242)||(733-775)


Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 93 - 413
Target Start/End: Complemental strand, 52963804 - 52963477
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52963804 atctaaccgtcccttttatcataaatagatctaaaggttaaaactaacaaatttatgaaggtctatgatggaccacttttaaggctggtccaccatagac 52963705  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52963704 atttggagttaaagttaacagtcgagatttatttgacaaacggagaaaaacttgagggaccaaaacatacgatttattaattgtgagaccaaaatgaaaa 52963605  T
Q  293 cttgaaattatttagaggaccaatggatcaaataatcttattttctcttatagtagcaaattaggttcta-------taaacacacataaatataacaat 385  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||       |||||||||| ||||||||||||    
T  52963604 cttgaaattatttagaggaccaattgatcaaataaacttatttgctcttatagtagcaaattaggttttataaacagtaaacacacaaaaatataacaat 52963505  T
Q  386 tgattacataaaagtagttgatgtgctt 413  Q
    ||||||||||||||||||||||||||||    
T  52963504 tgattacataaaagtagttgatgtgctt 52963477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 40792988 - 40792752
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || || ||||||||| ||| |||  ||||||||  || ||||| |||||||| |||||||| ||    
T  40792988 gaagatctaacggtcccttttatgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccactat 40792889  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||| ||||||||||||||  ||  |||||||||||||||||||||||||  ||||||||||||| ||| | ||||||||||||| ||||||||||    
T  40792888 agacatttaaagttaaagttaac--tcgggatttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatg 40792791  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||| |||||| ||||||||||| |  |||||||||    
T  40792790 aaaacttaaaattaattagaggaccattaaatcaaataa 40792752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 186 - 327
Target Start/End: Complemental strand, 2311065 - 2310924
Alignment:
Q  186 catagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||| |||||||||||||| || | |||||||||||||| ||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||    
T  2311065 catagacatttaaagttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaa 2310966  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  2310965 atgaaaacttgaaattaattagaggaccattggatcaaataa 2310924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 52241037 - 52241245
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    ||||||| ||||||||||| ||||||||||| || || |||||||||||||  ||  ||||||||| |||||||| |||||||| ||||| ||||||||     
T  52241037 atctaactgtcccttttatgataaatagatcgaatggataaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagat 52241135  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||||||||| |||   ||||||||||||||||||| ||||  ||||| | ||||||||||| |||||||||||||  | |||||||||||    
T  52241136 atttggagttaaagttaacggtcggaatttatttggcaaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaatgaaaa 52241235  T
Q  293 cttgaaatta 302  Q
    | ||||||||    
T  52241236 catgaaatta 52241245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 184 - 327
Target Start/End: Complemental strand, 390361 - 390218
Alignment:
Q  184 accatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||| |||||||||| |||||| |||||||||| |||||||||||||||||||| || |  |||||||||||||  |||| ||||||||||||| |||||    
T  390361 accacagacatttgaggttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggacca 390262  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  390261 aaatgaaaacttgaaattatttaggggaccaatgaatcaaataa 390218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 181 - 327
Target Start/End: Complemental strand, 42871242 - 42871096
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgaga 280  Q
    |||||| |||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||| ||    
T  42871242 tccaccgtagacatttggaattaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtggga 42871143  T
Q  281 ccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     ||||||||||| ||||||||| | || |||||| ||||||||||||    
T  42871142 tcaaaatgaaaatttgaaattaatcaggggaccattggatcaaataa 42871096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 150 - 327
Target Start/End: Original strand, 393575 - 393753
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgag 248  Q
    |||||||| ||||||||| |||||||| |||||||| ||| ||||||  | |||||||||||||||  | ||||||||||||||||||||||||  ||||    
T  393575 aaggtctacgatggaccacttttaaggttggtccactataaacatttagaattaaagttaacagtccgggatttatttggcaaacggagaaaaaagtgag 393674  T
Q  249 ggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  |||  ||||||||||||| |||||||||||||| ||||||||||||   |||||  ||||||||||||    
T  393675 ggaccaaaagatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataa 393753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 2312421 - 2312597
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||  |||||||||||||||||   |||  |||||| ||||| |||| |||||||||||||||||||| ||||  ||||||    
T  2312421 tctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgaggg 2312520  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||  ||||||||| ||||||||||||| ||| |||||| |||||||||||||| ||  |||||||||||||||||||    
T  2312521 acttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggaccaatggatcaaataa 2312597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 6348333 - 6348156
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagg 249  Q
    |||||||| | ||||||| | |||||| ||||||||||||||||||||| |||||| |||||  |||  ||||||||| ||||| ||| ||||  |||||    
T  6348333 aaggtctacggtggaccactcttaaggttggtccaccatagacatttgaggttaaacttaaccatcagaatttatttgacaaacagaggaaaaagtgagg 6348234  T
Q  250 gaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||   |||||| | ||||||||||    
T  6348233 aaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttgatcaaataa 6348156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 37882981 - 37882857
Alignment:
Q  183 caccatagacatttgaagttaaagttaacagtcaa--gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgaga 280  Q
    ||||||||| ||||||  |||||||||||||||||  |||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||||| ||    
T  37882981 caccatagatatttgagattaaagttaacagtcaaatgatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggga 37882882  T
Q  281 ccaaaatgaaaacttgaaattattt 305  Q
    | |||||||||||||||||||||||    
T  37882881 ctaaaatgaaaacttgaaattattt 37882857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 1829954 - 1829754
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa-gttaacagtcaagatttattt 226  Q
    |||||| ||||| ||| |||  |||||||| ||||||||| |||||| | |||||||| ||||||||||  ||||||| ||||||||||   ||||||||    
T  1829954 ggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacatttagagttaaaagttaacagtcggaatttattt 1829855  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
    | |||||| || ||||  |||||||| ||||  |||| ||||||||||||| |||||||||||||||||||||||||||   |||||  |||||||||||    
T  1829854 gacaaacgtaggaaaaagtgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccgttggatcaaata 1829755  T
Q  327 a 327  Q
    |    
T  1829754 a 1829754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 293
Target Start/End: Original strand, 7708665 - 7708869
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| ||||| |||||  |||||||||||  | ||||| |||||||||| |||  ||||||||||||| |||| |||||||| |||||||||||    
T  7708665 gaagatctaatggtccattttaagataaatagatcggatggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccat 7708764  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||| ||||  |||||||||||||| |   |||||||||||||||| ||||||||  |||||||| ||||||     ||||||||||||   |||||||||    
T  7708765 agatatttagagttaaagttaacacttgggatttatttggcaaacagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatg 7708864  T
Q  289 aaaac 293  Q
    |||||    
T  7708865 aaaac 7708869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 1587392 - 1587183
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa-gttaacagtcaa 217  Q
    ||||| || |||||| ||||||||| |||  ||||| || |||||| || |||||| | ||||| || ||||||||||  ||||||| ||||||  ||      
T  1587392 agatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacatttagagttaaaagttaaccatcgg 1587293  T
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||||||||| |||||||||| || |||||||||   |||||  ||    
T  1587292 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttgagggaccgttg 1587193  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  1587192 gatcaaataa 1587183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 23203830 - 23204043
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| ||||| |||||| ||||||| ||| || |||||||||||||||| |||  ||||||||  || ||||| |||||||| || ||||||||    
T  23203830 gaagatctaatggtccattttatgataaatatatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccat 23203929  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||| ||||  |||||||||||| | |   |||||| ||||||||||||||||||  ||| |||||||||||     |||||||| |||| ||||||||||    
T  23203930 agatatttagagttaaagttaatacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacgccatttttattaaatgtgggaccaaaatg 23204029  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  23204030 aaaatatgaaatta 23204043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 24426448 - 24426331
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    |||| |||||||||||||| ||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||    
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  319 atcaaataatcttatttt 336  Q
    ||||||||| | ||||||    
T  24426348 atcaaataagcctatttt 24426331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 327
Target Start/End: Complemental strand, 4129117 - 4128994
Alignment:
Q  204 aagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattat 303  Q
    |||||||| |||  |||||||||||||||||||||||||  | ||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  304 ttagagga-ccaatggatcaaataa 327  Q
    || ||||| ||| ||||||||||||    
T  4129017 tt-gaggaaccattggatcaaataa 4128994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 327
Target Start/End: Original strand, 42810118 - 42810318
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaag-ttaaagttaacagtcaagatttattt 226  Q
    |||| ||||||| |||||||  |||||||||| ||||| | | |||||  |||| |||||||||||| ||  | ||||| ||||||   | |||||||||    
T  42810118 ggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatctgggggttaaacttaacaccaaggatttattt 42810217  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
    ||||||||||| ||||  ||||||||  ||| ||||| ||||||||||||| |||||||||||||| |||||||||||||  |||| | |||||||||||    
T  42810218 ggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatcaaata 42810317  T
Q  327 a 327  Q
    |    
T  42810318 a 42810318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 1188994 - 1188844
Alignment:
Q  178 tggtccaccatagacatttgaagttaaa-gttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||| ||||||||||||||   |||||| ||||||  ||  |||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||||    
T  1188994 tggttcaccatagacatttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattgt 1188895  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    | ||||||||| |||||||||||||||||   |||| | ||||||||||||    
T  1188894 gggaccaaaataaaaacttgaaattatttgagggactattggatcaaataa 1188844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 11968687 - 11968534
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||||||||||| | |||||| ||||||| |||||||||  |   |||||||||| |||| |   ||||||||  ||||||||| ||||  |||||||    
T  11968687 tctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttattttacaaacggagcaaaatctgaggga 11968588  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    |||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  11968587 ccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattattt 11968534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 302
Target Start/End: Original strand, 53435654 - 53435843
Alignment:
Q  114 taaatagatctaaaggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaaca 212  Q
    |||| ||||| || |||||||||| || ||||| |||||| |||| | ||||||| | |||||| ||||| ||||||||||||| |||||||| |||||     
T  53435654 taaaaagatcaaacggttaaaatttaaaaaattaatgaag-tctacggtggaccactcttaaggttggtctaccatagacatttaaagttaaacttaacc 53435752  T
Q  213 gtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||| ||||||||| | |||||||  ||||||||||| ||||||| |  | ||||||| || || ||||||||||||||||||||||||    
T  53435753 gtcaaggatttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaatta 53435843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 327
Target Start/End: Complemental strand, 1794627 - 1794412
Alignment:
Q  115 aaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaac 211  Q
    |||| |||| || |||| ||||||| |||||||  |||||||||| ||||||| | |||||| |||||||||||| ||||   |||   ||||| |||||    
T  1794627 aaattgatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaac 1794528  T
Q  212 agtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagagga 311  Q
     || | |||||||||| ||||| ||| ||||  ||||||| ||||| |||   |||||||||||||||| ||||||||||||||||||||||||   |||    
T  1794527 cgttaggatttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtgagatcaaaatgaaaacttgaaattatttgaggga 1794428  T
Q  312 ccaatggatcaaataa 327  Q
    ||| || |||||||||    
T  1794427 ccattgaatcaaataa 1794412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 13533168 - 13533363
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||||||||| | ||||| || |||||||||| ||||| |  | ||| | |||||||||||||||||||||||||||| |||||||||  |    
T  13533168 agatcaaatggttaaaattgaaaaattaat-aaggtctatggtggactatctataatgttggtccaccatagacatttgaagttaaatttaacagtctgg 13533266  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||||| |  ||||||| |||| |||||||||||||| |  | ||| ||| || ||  || || ||||||||||||||||| ||||||||||||    
T  13533267 atttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaattaattagaggaccaa 13533363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 27850878 - 27851047
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||| |||||||||||||||||   |||| |||||| ||||| ||   |||||||       |||||| |||| |||||||    
T  27850878 tctatggtggaccacttttaaggttggtccaccatagacatcatttgaggttaaacttaactgttgggatttat-------acggaggaaaaattgaggg 27850970  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||  |||| ||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||    
T  27850971 accaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 44503644 - 44503771
Alignment:
Q  178 tggtccaccatagacatttgaagttaaa-gttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||| ||||||||||||||   |||||| |||||| |||  |||||||||||||||| ||| ||||  ||||||||||||| ||||| ||||||||||||    
T  44503644 tggttcaccatagacatttagggttaaaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacg-tttattaattgt 44503742  T
Q  277 gagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||||||| |||||||||||||||||    
T  44503743 gagaccaaaataaaaacttgaaattattt 44503771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 52240053 - 52239878
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| | |||||| |||||||||||||||||  ||   ||||||||||||  |    ||||||||||||||||||||||||| ||| | |    
T  52240053 tctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaa 52239954  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||| ||||||||||||| || |||||| |||| ||||||||||||   |||||| | ||||||||||    
T  52239953 ccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaattatttgagggaccattagatcaaataa 52239878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 4871352 - 4871479
Alignment:
Q  201 ttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||||||||| ||| | ||||||||| ||||||||||||||| || |||||  |||| |||| ||||||||||||   |||||||||||||| |||||    
T  4871352 ttaaagttaacattcagggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatgaaaacatgaaa 4871451  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
    |||||| | |||||||||||||||||||    
T  4871452 ttattttggggaccaatggatcaaataa 4871479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 11438533 - 11438683
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||| ||||||||||  |||||| |||| ||||| |||||||||| ||||| |||| ||||  |||||||||||||||   | |||||||||| |    
T  11438533 tggtccaccgtagacatttggggttaaacttaaaagtcagagatttatttagcaaatggaggaaaaagtgagggaccaaaacgagtgttttattaattat 11438632  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||| ||||||| ||||||| ||| |||| |||||| |||||||    
T  11438633 gagaccaaaataaaaacttcaaattatataggggactaatggaacaaataa 11438683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 44501629 - 44501519
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||||||||| ||||||||  ||||||||  ||||||||| |||||||||| || ||||| |||||||||||||||||||||   ||||||||    
T  44501629 agatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaat 44501530  T
Q  317 ggatcaaataa 327  Q
    || ||||||||    
T  44501529 ggttcaaataa 44501519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 326
Target Start/End: Original strand, 6349490 - 6349667
Alignment:
Q  152 ggtctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgag 248  Q
    |||||||| ||||||| | |||||| || ||||||||| ||||   |||  |||||| |||||  ||  ||| ||||||| |||||||  ||||  ||||    
T  6349490 ggtctatggtggaccactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgag 6349589  T
Q  249 ggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||   |||||| || ||||||||    
T  6349590 ggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgaatcaaata 6349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 13165671 - 13165522
Alignment:
Q  153 gtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacggagaaaaacttgaggga 251  Q
    ||||||| ||||||| | |||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||| ||||  ||| |||    
T  13165671 gtctatggtggaccactcttaaggttggtccaccatagaaatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagatgaagga 13165572  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    | ||||||     ||||||||||  | ||||||||||||||| ||||||||    
T  13165571 cgaaaacgccatttttattaatt-agggaccaaaatgaaaacatgaaatta 13165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 54485551 - 54485645
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggac 312  Q
    |||||||||||||||||||  ||||||||||||| ||||||| | | |||||||||| || || |||||||||||||||||||||||||| ||||    
T  54485551 gatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatgaaaacttgaaattatttaggggac 54485645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 1190198 - 1190307
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||| ||||||||  ||||| ||  ||||||||| |||||||||| || ||||||||||||||||| |||||||||   |||||||||    
T  1190198 gatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaatg 1190297  T
Q  318 gatcaaataa 327  Q
    | ||||||||    
T  1190298 gttcaaataa 1190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 327
Target Start/End: Original strand, 1588037 - 1588204
Alignment:
Q  163 gaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacg 259  Q
    |||||| ||||||| ||||| |||||||||||   |||  |||||| ||||||||||  |||||||||| |||||||| ||||  |||||||   |||||    
T  1588037 gaccaactttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacg 1588136  T
Q  260 tacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||  ||||||||||||| ||| ||||||||||||| |||||||||   |||||||  ||||||||||    
T  1588137 tacattttattaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaaagatcaaataa 1588204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 2311192 - 2311080
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||||  |||  |||||||| ||| ||||| |||||||  |||||||||||    
T  2311192 gaagatctaacggtcc-ttttatgataaatagatcgaatggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtccaccat 2311094  T
Q  189 agacatttgaagtt 202  Q
    |||||||| |||||    
T  2311093 agacatttaaagtt 2311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 302
Target Start/End: Original strand, 10168689 - 10168873
Alignment:
Q  120 gatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaag-ttaaagttaacagtcaag 218  Q
    |||||||||| |||||||||  || |||  ||||| || | |||||||  | ||| | ||||||||||||||||||||  | ||||||||||| |||| |    
T  10168689 gatctaaaggctaaaattaaataaattaataaggtgtacggtggaccatctataatgttggtccaccatagacatttgggggttaaagttaactgtcatg 10168788  T
Q  219 -atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
     ||||||||||||||||||| ||||  |||||||| ||||||     ||||||||||||| ||||||||||||||| ||||||||    
T  10168789 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 10168873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 305
Target Start/End: Complemental strand, 27847824 - 27847701
Alignment:
Q  182 ccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagac 281  Q
    |||||||| |||||||  |||||| ||||| |||  |||||||||||||||||||  |||| || ||||||| |||  |||  ||||||||||||| |||    
T  27847824 ccaccatatacatttggggttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggac 27847725  T
Q  282 caaaatgaaaacttgaaattattt 305  Q
    |||||| |||||||||||||||||    
T  27847724 caaaataaaaacttgaaattattt 27847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 15450015 - 15450190
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagaca---tttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| |||||||| |||||||   |||| ||||||| ||||| || |||||||||||||||||||||| ||||  | || |    
T  15450015 tctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgt-aagatttatttggcaaacggaggaaaaggtaagcg 15450113  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||  ||||||||| |||||||| |  | || || ||||||||| ||||||||||||  ||||||||| |||||||||    
T  15450114 acttaaacgtacgttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataa 15450190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 42872308 - 42872414
Alignment:
Q  221 ttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggat 320  Q
    ||||||||||||||||| ||||  ||||||||||||||||||  |||||||||| || |||||||||||||| | | ||||| |||| |||||| || ||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  321 caaataa 327  Q
    |||||||    
T  42872408 caaataa 42872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 49344015 - 49344125
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttga-gggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||||||||||||||||||| ||||  ||| |||||  ||||  ||| ||||||||||||| ||||||||| ||| ||| |||||||||||||||||| |    
T  49344015 gatttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaataaaagcttaaaattatttagaggaccatt 49344114  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  49344115 ggatcaaataa 49344125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 1831269 - 1831378
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||  ||| |||| ||||  ||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| ||   |||||| ||    
T  1831269 gatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccattg 1831368  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  1831369 gatcaaataa 1831378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 31968398 - 31968507
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||| ||| ||||  ||| ||||||||||||||| ||||||||||||  |||||||||||||| || |||||| |||| |||||  ||    
T  31968398 gatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgttg 31968497  T
Q  318 gatcaaataa 327  Q
    |||| |||||    
T  31968498 gatctaataa 31968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 53432213 - 53432088
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||| |||||||||||||||  |||||| ||||| |||| | ||||||||| | |||| ||  ||||||||||||||||||| || | ||||||| || |    
T  53432213 tggttcaccatagacatttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttat 53432114  T
Q  277 gagaccaaaatgaaaacttgaaatta 302  Q
    | ||||||||||||||||||||||||    
T  53432113 gggaccaaaatgaaaacttgaaatta 53432088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 53204471 - 53204383
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||||||||||||||||||||||| |||||| || ||||||   | |||||||||||||||| |||||||||||| | ||||||||||    
T  53204471 gatttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaacattaaattattta 53204383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 55764342 - 55764450
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    |||||||||||||||  |  |||||||||| | |||||||| | | |||||||||| ||| || |||||||||||||||||||||||| | |||||||||    
T  55764342 atttatttggcaaacaaaagaaaacttgagcggccaaaacggaagttttattaattatgatacaaaaatgaaaacttgaaattatttaaaagaccaatgg 55764441  T
Q  319 atcaaataa 327  Q
    || ||||||    
T  55764442 atgaaataa 55764450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 31965963 - 31965836
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||| ||||||  || |||||||||||||||||||| ||||  ||||||||||||| ||||  ||| ||||||||  ||||| ||| |||||||||||    
T  31965963 gttaaacttaacacccaggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaa 31965864  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
    ||| |||| ||| || | ||||||||||    
T  31965863 ttaattaggggatcattagatcaaataa 31965836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 53205451 - 53205598
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgag 279  Q
    ||||||||||||||||||  ||||||||||||  || | ||||||||||||||||||| ||||  |||||||| ||||||     ||| ||||||||| |    
T  53205451 tccaccatagacatttgagattaaagttaacacccatggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtggg 53205550  T
Q  280 accaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    || ||||||||||  ||||||||||| | |||| |||| |||||||||    
T  53205551 acgaaaatgaaaatctgaaattatttgggggactaatgaatcaaataa 53205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 33232664 - 33232777
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||| |||||||||||| |||||||||||| |  |||||||||||||||||||||| ||||  |||||||| ||||||     |||||||||||||    
T  33232664 tggtccacaatagacatttga-gttaaagttaacggaaaagatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtg 33232762  T
Q  278 agaccaaaatgaaaa 292  Q
     ||||||||| ||||    
T  33232763 ggaccaaaataaaaa 33232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 7707765 - 7707614
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| ||||| |||| ||||||   |||  ||||||| |||| |||| |||||||||||||||| ||| ||||  ||| ||    
T  7707765 tctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttatttggcaaacagaggaaaatgtgatgg 7707666  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    || |||||||    ||||||||||||| ||||||||||||||| ||||||||    
T  7707665 actaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 7707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 37884243 - 37884392
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||| ||||||| | |||||  |||||| |||||||||  |||||||||||||||||||| ||||  | | ||||||||| ||||  |||||||||| ||    
T  37884243 tggttcaccatatatatttggggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatg 37884342  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     ||| |||||||||| || |||||||||   |||||| || |||||||||    
T  37884343 ggacaaaaatgaaaatttaaaattatttgagggaccattgaatcaaataa 37884392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 55828786 - 55828894
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    |||||||||||||||  |  |||||||||| | |||||||| | | |||||||||| ||| || ||||| |||||||||||||||||| | |||||||||    
T  55828786 atttatttggcaaacaaaagaaaacttgagtggccaaaacggaagttttattaattatgatacaaaaataaaaacttgaaattatttaaaagaccaatgg 55828885  T
Q  319 atcaaataa 327  Q
    || ||||||    
T  55828886 atgaaataa 55828894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 13166734 - 13166793
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacgga 236  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13166734 tggtccatcatagacatttgaagttaaacttaacagtcaaggatttatttggcaaacgga 13166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 54484455 - 54484336
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  ||||||||||||||||   ||||||||||||||||| ||| |||| || ||||||||||||| ||| |||||||||| ||  ||||||    
T  54484455 atagacatttagagttaaagttaacagtttgagatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaa 54484356  T
Q  286 atgaaaactt-gaaattatt 304  Q
    || |||| || |||||||||    
T  54484355 ataaaaaattggaaattatt 54484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 292
Target Start/End: Complemental strand, 40723402 - 40723264
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| | ||||| | |||||| |||||||||||| |||||||| |||||| ||||||||   |||||||||| |  ||||||| |||| | |||||||    
T  40723402 tctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagtatggatttatttgaccgacggagataaacctaagggacc 40723303  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| |  | ||||||| || || ||||||||||||||    
T  40723302 aaaacatgagttttattagttatgggaccaaaatgaaaa 40723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 5591421 - 5591498
Alignment:
Q  184 accatagacatttgaagttaaagttaacagtc-aagatttatttggcaaacggagaaaaacttgagggaccaaaacgt 260  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||   |||||||| |||||||    
T  5591421 accatagacatttgaagttaaatttaacagccaaagatttatttggcaaacagagaaaagagtgagggactaaaacgt 5591498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 48126949 - 48126872
Alignment:
Q  184 accatagacatttgaagttaaagttaacagtc-aagatttatttggcaaacggagaaaaacttgagggaccaaaacgt 260  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||   |||||||| |||||||    
T  48126949 accatagacatttgaagttaaatttaacagccaaagatttatttggcaaacagagaaaagagtgagggactaaaacgt 48126872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 50548190 - 50548310
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||| |||||||||||| ||||||||| || |  | |||||||||||||||| ||| ||||  |||||||| |||||||     ||||||||||||    
T  50548190 tggtccacaatagacatttga-gttaaagttgacggaaaggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtg 50548288  T
Q  278 agaccaaaatgaaaacttgaaa 299  Q
     ||||||||||||||| |||||    
T  50548289 ggaccaaaatgaaaacatgaaa 50548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 54866612 - 54866720
Alignment:
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||| ||||| | |||||| |||||      ||||||||||||| ||||||||||||||    
T  54866612 atttggagttaaacttaacagtcatgatttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgtg-gaccaaaatgaaaa 54866710  T
Q  293 cttgaaatta 302  Q
      ||||||||    
T  54866711 tatgaaatta 54866720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 4714196 - 4714116
Alignment:
Q  153 gtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtc-aagatttatttggcaaa 232  Q
    ||||||| ||||||| | |||||| || ||||||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  4714196 gtctatggtggaccactcttaaggttgatccaccatagacatttgaagttaaacttaatagtcgatgatttatttggcaaa 4714116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 260
Target Start/End: Complemental strand, 22069411 - 22069303
Alignment:
Q  153 gtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgaggga 251  Q
    ||||||| || |||| |||||||| | |||||||||||||||||||||||||||||||||  ||  ||||||||||   |||||| | |||| | |||||    
T  22069411 gtctatggtgaaccacttttaaggttcgtccaccatagacatttgaagttaaagttaacaaccattgatttatttgaataacggaaacaaacataaggga 22069312  T
Q  252 ccaaaacgt 260  Q
    |||||||||    
T  22069311 ccaaaacgt 22069303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 304
Target Start/End: Complemental strand, 49342787 - 49342643
Alignment:
Q  161 tggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggaccaaaacg 259  Q
    ||||||| |||||||| |||||||| |||||| ||||  |||||| ||||||   || | |||||||  |||| |||| ||||  ||||||||  |||||    
T  49342787 tggaccacttttaaggttggtccactatagacgtttggggttaaacttaacaccgaataatttatttaacaaatggaggaaaaagtgagggacttaaacg 49342688  T
Q  260 tacgatttattaattgtgagaccaaaatgaaaacttgaaattatt 304  Q
    |||  ||||||||||||| || |||||||||||||| ||||||||    
T  49342687 tacattttattaattgtgggatcaaaatgaaaacttaaaattatt 49342643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 302
Target Start/End: Complemental strand, 33231563 - 33231415
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacatttgaag-ttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||| ||||||| || ||||| | ||||||||||||||||||| | ||||| ||||||   | || |||||||||||||||| ||||||  ||||||||     
T  33231563 tatggtggaccacttctaaggtttgtccaccatagacatttgagggttaaacttaacaagtatgaatttatttggcaaacggtgaaaaagatgagggact 33231464  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||      ||||||||||||| ||| ||||||||||| ||||||||    
T  33231463 aaaacaccatttttattaattgtgggactaaaatgaaaacatgaaatta 33231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 44498636 - 44498573
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    |||||| ||||||| | |||||| || |||||||||||||||| |||||||||||||| |||||    
T  44498636 tctatggtggaccactcttaaggttgatccaccatagacatttaaagttaaagttaaccgtcaa 44498573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 10167535 - 10167451
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||| ||||||||| ||||  |||||||| |||| | |   |||||||||||||  |||||||||||||| ||||||||    
T  10167535 gatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaatta 10167451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 56085522 - 56085458
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    |||||| ||||||| | |||||| | ||||||||||||||||||  |||||||||||||| ||||    
T  56085522 tctatggtggaccactcttaaggttagtccaccatagacatttggggttaaagttaacagccaag 56085458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 54865245 - 54865131
Alignment:
Q  187 atagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacga-tttattaattgtgagaccaaa 285  Q
    ||||||||||||  |||||||| |||   | |||||||||| ||||||||| ||||  |||||||| |||||  || | |||||||||| || |||||||    
T  54865245 atagacatttgagattaaagttgacataaatgatttatttgacaaacggaggaaaatgtgagggactaaaac--acaattttattaattatgggaccaaa 54865148  T
Q  286 atgaaaacttgaaatta 302  Q
    |||||||| | ||||||    
T  54865147 atgaaaacataaaatta 54865131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 50547016 - 50546932
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||||||||||| | ||||  |||||||| ||||||     ||||||||||||| ||| |||||||| || ||||||||    
T  50547016 gatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaagacatgaaatta 50546932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 40244425 - 40244188
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||||| |||||| ||||||||||| ||  ||||||||||||||| |||  |||||||| ||||||||| |||||||  |||||||||||    
T  40244425 gaagatctaacggtccattttatgataaatagatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccat 40244326  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||| ||||||||||||||||| ||||| ||| ||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  40244325 agacacttgaagttaaagttaactgtcaaaatt-atttggcaaacggaggaaaatttgagggaccaaaatgtacgttttattaattgtgagaccaaaatg 40244227  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  40244226 aaaacttgaaattatttaagggaccaatggatcaaataa 40244188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 34818325 - 34818087
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||||||||||| |||  |||||||||||| || || |||||||| || || |||||    
T  34818325 gaagatctaatggtcccttttatgataaatagatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccat 34818226  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||| ||||||||||||||  |   ||||||||||||||| |||| ||||  |||||||||||| | |||| ||||||||||||| ||||||||||    
T  34818225 agacatttaaagttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatg 34818126  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||| ||||||||||| || |||||||||    
T  34818125 aaaacttgaaattaattagaggaccattgaatcaaataa 34818087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 38241144 - 38240907
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||| ||| ||||||| ||||||||||| || |||||||||||||||| |||  ||| |||| ||||||||| |||||||  |||| ||||||    
T  38241144 gaagatctaaccgtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaagt-tggttcaccat 38241046  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||| ||||||| ||||||| |  |||||||||||||||||||| ||||  ||| ||||  ||||||||| ||||||||||||| |||||||||     
T  38241045 agacatttggagttaaacttaacagccgggatttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaata 38240946  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||| ||||||||||| |  |||||||||||||||||||    
T  38240945 aaaatttgaaattattcaagggaccaatggatcaaataa 38240907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 27838158 - 27837946
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||||| |||||| ||||||||||| ||  ||||||||||||||| |||  |||||||| ||||||||| ||||||   ||||| |||||    
T  27838158 gaagatctaacggtccattttatgataaatagatcgaatagttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccat 27838059  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||  |||||||| ||||||    |||||||||||||| ||||||||||    
T  27838058 agacatttgaagtt-aagttaacagtcaggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaatg 27837960  T
Q  289 aaaacttgaaatta 302  Q
    ||||| ||||||||    
T  27837959 aaaacatgaaatta 27837946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 35372036 - 35372248
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||| |||| |||||| ||||||||||| || |||||||||||||||| |||  |||||||| ||||||||| ||||||   ||||||| |||    
T  35372036 gaagatctaacagtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacat 35372135  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||||||||| ||||||||||| | |||||||||||||||| ||| ||||  |||||||| ||||||     ||||||||||||||||||||||||    
T  35372136 agacatttgaagtt-aagttaacagtaaggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatg 35372234  T
Q  289 aaaacttgaaatta 302  Q
    ||||| ||||||||    
T  35372235 aaaacatgaaatta 35372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 303
Target Start/End: Original strand, 40745343 - 40745557
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| |    |||||||||||||| |||  |||||||| |||| |||| |||||||| || | || |||    
T  40745343 gaagatctaacggtcccttttataataaatagatcgagtaattaaaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatcat 40745442  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | ||||||| | ||||||||||| |||||||||||||| ||||||  || ||||  ||||||| ||||||| | | ||||| ||||||||||||||||||    
T  40745443 aaacatttggaattaaagttaacggtcaagatttattttgcaaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatg 40745542  T
Q  289 aaaacttgaaattat 303  Q
    ||||||| |||||||    
T  40745543 aaaacttaaaattat 40745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 53624269 - 53624476
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| ||||||||||||| | ||||| || |||||||||| ||||| |  | ||| | |||||||||||| |||||||  ||||||  |||| |||  |    
T  53624269 agatcaaaaggttaaaattgaaaaattaat-aaggtctatggtggactatctataatgttggtccaccatatacatttggggttaaacctaaccgtctgg 53624367  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    ||||||||||||||| ||||||||  |||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||   |||||| |||    
T  53624368 atttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaattgtgagatcaaaatgaaaacttgaaattatttgagggaccattgg 53624467  T
Q  319 atcaaataa 327  Q
    |||||||||    
T  53624468 atcaaataa 53624476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 293
Target Start/End: Complemental strand, 10731083 - 10730920
Alignment:
Q  130 ttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggc 229  Q
    |||||||||||||| |||  ||||| |||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  10731083 ttaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacatttgaagttaaagttaacagtcgggatttatttggc 10730984  T
Q  230 aaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaac 293  Q
    |||||||||||||  ||| ||||||||| |     |||||||||| || |||||||||||||||    
T  10730983 aaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaac 10730920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 18197340 - 18197170
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacattt-gaagttaaagttaacagtcaagatttattt 226  Q
    |||||||||||||||| |||  |||||||||||||||        |||| |||| |||||||||  ||| | ||||||||||||| |||  |||||||||    
T  18197340 ggttaaaattaacaaaattaataaggtctatgatgga--------aaggttggttcaccatagatgttttggagttaaagttaacggtctggatttattt 18197249  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||||||| ||||  ||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  18197248 ggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattattt 18197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 94 - 302
Target Start/End: Original strand, 26887437 - 26887645
Alignment:
Q  94 tctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagaca 193  Q
    ||||||||||||||||||||||| |||||| || |||| |||| || ||| |||   ||||||| ||| ||||| |||||||| |||| ||||||||| |    
T  26887437 tctaacggtcccttttatcataattagatcgaatggttgaaataaataaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagata 26887536  T
Q  194 tttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaac 293  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||| ||||  |||||||| |||  |     ||||||||||||| ||| |||||||||||    
T  26887537 tttgaagttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgccatttttattaattgtgggacaaaaatgaaaac 26887636  T
Q  294 ttgaaatta 302  Q
     ||||||||    
T  26887637 atgaaatta 26887645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 156 - 305
Target Start/End: Original strand, 38242458 - 38242609
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||| ||||||| | |||||| |||||||||||||||||  ||  ||||||| ||||| || | |||||||||||||||| || |||||  |||||||||    
T  38242458 tatggtggaccactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggacc 38242557  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    |||| ||||| ||||||||||||| || ||||||||||||||||||||||||    
T  38242558 aaaaggtacgttttattaattgtgggatcaaaatgaaaacttgaaattattt 38242609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 133 - 314
Target Start/End: Complemental strand, 53420513 - 53420330
Alignment:
Q  133 aaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag--atttatttggca 230  Q
    ||||||| || ||||  |||||||||| |||| || |||||| | ||||||||||||||||||||  |||||| |||| || | ||  |||||||||  |    
T  53420513 aaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtggttaaacttaatagactagggatttatttgata 53420414  T
Q  231 aacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggacca 314  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||  ||||||||||||||  |||||||| |||| ||||||    
T  53420413 aacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaattagttaggggacca 53420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 220 - 327
Target Start/End: Original strand, 37736089 - 37736196
Alignment:
Q  220 tttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgga 319  Q
    |||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||| |||| |    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggactaatgaa 37736188  T
Q  320 tcaaataa 327  Q
    ||| ||||    
T  37736189 tcacataa 37736196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 327
Target Start/End: Original strand, 18458662 - 18458772
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||||||||||||| ||||  |||||||| |||||| | | ||||||||||||| ||||||||| ||||||||||||||||||| |||| |||    
T  18458662 agatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaat 18458761  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  18458762 ggatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 37735417 - 37735307
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||| |||||| |||||||  |||||||| ||||| |||| |||||||||| || ||||||||||||||||| |||||||||| |||||||||    
T  37735417 agatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaat 37735318  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  37735317 ggatcaaataa 37735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 41263877 - 41263664
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| ||||| |||||| ||||||||||| || |||||||||||||||| |||  ||||||||  || ||||| |||||||| || ||||||||    
T  41263877 gaagatctaatggtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccaccat 41263778  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||| ||||  |||||||||||||| |   |||||| ||| ||||||||||||||  ||| ||||||||| |     |||| ||| |||| ||||||||||    
T  41263777 agatatttagagttaaagttaacacttgggatttaattgacaaacggagaaaaagatgacggaccaaaatgccatttttaataaatgtgggaccaaaatg 41263678  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  41263677 aaaatatgaaatta 41263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 53194837 - 53194962
Alignment:
Q  180 gtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtga 278  Q
    |||||||||||||||||  ||||||| ||||||| || | ||||||||||||||  ||| ||||  ||||||||||||||||||| |||||||||| ||     
T  53194837 gtccaccatagacattttgagttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgg 53194936  T
Q  279 gaccaaaatgaaaacttgaaattatt 304  Q
    ||||||||||||||||||||||||||    
T  53194937 gaccaaaatgaaaacttgaaattatt 53194962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 50810808 - 50810943
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  ||||||||||||||||   ||||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  50810808 atagacatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 50810907  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||||||||    
T  50810908 atgaaaaattgaaattatttaagggaccaatggatc 50810943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 50865056 - 50864921
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  ||||||||||||||||   ||||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  50865056 atagacatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 50864957  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||||||||    
T  50864956 atgaaaaattgaaattatttaagggaccaatggatc 50864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 327
Target Start/End: Complemental strand, 3208658 - 3208485
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccataga--catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||| ||||||| | |||||| ||||||||||||    ||||||  |||||| ||||| || | |||||||||| ||||||||| ||||  | ||||| |    
T  3208658 tatggtggaccactcttaaggttggtccaccataatatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatc 3208559  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||| |||||||||| || |||||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  3208558 aaaacgtacgttttattaattatgggaccaaaatgaaaaatggaaattaattagaggaccaatggattaaataa 3208485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 18442399 - 18442255
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  |||||| ||||||  || || ||||||||||||  ||| ||||   ||| |||| |||||||  | ||||||||||||    
T  18442399 tggtccaccatagacatttggggttaaacttaacaa-catgaatttatttggcaagaggaaaaaa---tgatggactaaaacgtgggttttattaattgt 18442304  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 325  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18442303 gggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 18442255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 325
Target Start/End: Complemental strand, 19487473 - 19487329
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  |||||| ||||||  || || ||||||||||||  ||| ||||   ||| |||| |||||||  | ||||||||||||    
T  19487473 tggtccaccatagacatttggggttaaacttaacaa-catgaatttatttggcaagaggaaaaaa---tgatggactaaaacgtgggttttattaattgt 19487378  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 325  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19487377 gggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 19487329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 40364470 - 40364320
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||| |||||||||||||| | |||||| ||||||   ||| ||||||||||||||||||||||||  ||||||||  ||||||||  |||||||||| |    
T  40364470 tggttcaccatagacattttaggttaaacttaacaccgaaggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaatttt 40364371  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
      ||||||||||||||||||||||||||||| | |||| | ||||||||||    
T  40364370 aggaccaaaatgaaaacttgaaattatttagggaaccattagatcaaataa 40364320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 42685086 - 42684880
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa- 217  Q
    ||||| || |||| ||||||| |||||||  ||||| |||| ||||||| | |||||  |||| |||||||||||||||  |||||| |||||||||||     
T  42685086 agatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacatttggggttaaacttaacagtcaag 42684987  T
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||| ||||  |||||||  |||||||| |||||||  | |||||| ||| ||  |||||||||||||||| ||||||||||| |||  ||||    
T  42684986 gatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaacttaaaattatttag-gga--aatg 42684890  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  42684889 gatcaaataa 42684880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 53613101 - 53612897
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||| ||         ||||||  ||| |||| |||||| | |||| || |||    
T  53613101 gaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaataa---------ggtctacaatgaaccacttttaaagttggttcatcat 53613011  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||||||||||||||||| |||  |||||||||||||||| ||| ||||  |||||||  ||||||     |||||||||| || ||||||||||    
T  53613010 agacatttgaagttaaagttaacggtcgggatttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatg 53612911  T
Q  289 aaaacttgaaatta 302  Q
    |||||  |||||||    
T  53612910 aaaacaagaaatta 53612897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 3209843 - 3209959
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||| | |||||| ||||||||||| || |||||||||||||||| |||  ||||| || ||||||| | |||||||| |||||||||||    
T  3209843 gaagatctaacggttcattttatgataaatagatcaaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccaccat 3209942  T
Q  189 agacatttgaagttaaa 205  Q
    | |||||||||||||||    
T  3209943 atacatttgaagttaaa 3209959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 50809563 - 50809428
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  |||||||||| |||||   ||||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  50809563 atagacatttagagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaa 50809464  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||| ||||    
T  50809463 atgaaaaattgaaattatttaagggaccaatagatc 50809428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 50866299 - 50866434
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  |||||||||| |||||   ||||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  50866299 atagacatttagagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaa 50866398  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||| ||||    
T  50866399 atgaaaaattgaaattatttaagggaccaatagatc 50866434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 315
Target Start/End: Original strand, 20288189 - 20288327
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||||||||||||||||||| ||||||| |||||||||| | ||||||||| | ||| |||| |||||||||||||||| || |  | |||||||||| |    
T  20288189 tggtccaccatagacatttggagttaaacttaacagtcagggatttatttgactaacagagacaaacttgagggaccaacacatgagttttattaattat 20288288  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    | || |||||||||||||  |||||| |||| |||||||    
T  20288289 gggatcaaaatgaaaactaaaaattaattaggggaccaa 20288327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 36176512 - 36176622
Alignment:
Q  218 gatttatttggcaaacggag-aaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||||||||||||||| ||| |||||  |||||||||||||| |||  ||||||||||||| ||||||||||||||| |||||||| | || |||||| |    
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  36176612 ggatcaaataa 36176622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 152 - 327
Target Start/End: Original strand, 12107917 - 12108098
Alignment:
Q  152 ggtctatgatggaccaattttaaggctggtccaccataga---catttgaagttaaagttaacagtcaagatttat---ttggcaaacggagaaaaactt 245  Q
    |||||||| ||||||| |||||||| |||||||||||| |   ||||||  |||||| ||||||  |  |||||||   ||||||||||||| ||||  |    
T  12107917 ggtctatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaacacccgtgatttattatttggcaaacggaggaaaaagt 12108016  T
Q  246 gagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||  || | ||||||| ||||| ||||||||||||||||||||||||||||  |||| | || |||||||||    
T  12108017 gagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggactattgaatcaaataa 12108098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 24403385 - 24403240
Alignment:
Q  183 caccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagac 281  Q
    ||||||||||||||   |||||||||||||  || | ||||| ||| |||||||||   |||||||||||||||||| ||   |||||||||| ||||||    
T  24403385 caccatagacatttagggttaaagttaacaaacatggatttacttgacaaacggaggtgaacttgagggaccaaaacataaattttattaattatgagac 24403286  T
Q  282 caaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    || |||||||||||||||||| |||| |||||||| || |||||||    
T  24403285 cataatgaaaacttgaaattaattagtggaccaatagaccaaataa 24403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 53187668 - 53187560
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||  ||||  |||||||||||| | |||  |||||||||||| ||| |||||||||||||||||||||||||| |||||| |     
T  53187668 gatttatttggcaaacggaagaaaaagtgagggaccaaa-catacattttattaattgtaagatcaaaatgaaaacttgaaattatttaggggaccattc 53187570  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  53187569 gatcaaataa 53187560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 36175410 - 36175306
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgaga 280  Q
    |||| ||||||||||||  |||||| |||||||||  |||||||||||||||||||||||||  ||||| ||||||||||||| || ||||||| ||| |    
T  36175410 tccatcatagacatttggggttaaacttaacagtccggatttatttggcaaacggagaaaaaaatgaggcaccaaaacgtacgtttcattaattatgaca 36175311  T
Q  281 ccaaa 285  Q
    |||||    
T  36175310 ccaaa 36175306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 3455565 - 3455728
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacattt---gaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| |||||||||||| ||||||   |  |||||||||||| |||| |||||||||| |  ||||||| |||| ||| ||    
T  3455565 tctatggtggaccactcttaaggttggtccaccata-acattttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaagg 3455663  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||| |  | ||||||| || ||||||||||||||||||||||||||| || | |||||||    
T  3455664 accaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattcggggaccaa 3455728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 41544772 - 41544663
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||| ||| ||||  ||||||||  ||||||||| | |||||||| |  ||||||||||||||||||||||||||||  |||||||||    
T  41544772 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaatg 41544673  T
Q  318 gatcaaataa 327  Q
     ||| |||||    
T  41544672 aatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 53421767 - 53421856
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttag 307  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||  ||| ||||||||||| | |||||| ||||    
T  53421767 gatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaattag 53421856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 34819225 - 34819399
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| || ||||| ||||||||   |||  |||||| ||||||| ||||   |||||||||||| |||||||| | || ||    
T  34819225 tctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacag-caaggactatttggcaaacagagaaaaagt-gaagg 34819322  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||  ||||||||| ||||||||||||  || ||||||||||||||||||||||||   |||| ||||||||||||||    
T  34819323 acttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataa 34819399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 41264658 - 41264743
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||||||||||||||||||||||||||  ||||||| |||||||     |||||||| |||||||||||||||||||| ||||||||    
T  41264658 agatttatttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaatta 41264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 20336622 - 20336702
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaa 257  Q
    ||||||| |||||||||||| ||||||| |||||||||| | ||||||||| | |||||||| ||||||||||||||||||    
T  20336622 tggtccaacatagacatttggagttaaacttaacagtcatgaatttatttgactaacggagacaaacttgagggaccaaaa 20336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 273
Target Start/End: Complemental strand, 12106752 - 12106629
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagg 249  Q
    |||||||| | ||||||| || |||  ||||||||  |||||||||| | ||||||||| ||||  | ||||||||||  |||||||||||||  |||||    
T  12106752 aaggtctacggtggaccatttataatactggtccataatagacatttaaggttaaagttgacagaaaggatttatttgataaacggagaaaaaagtgagg 12106653  T
Q  250 gaccaaaacgtacgatttattaat 273  Q
    |||||||| ||||| |||||||||    
T  12106652 gaccaaaatgtacgttttattaat 12106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 312
Target Start/End: Original strand, 28909548 - 28909705
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggac 252  Q
    |||||| ||||||||  |||||  |||| ||||| ||| |||||  |||||| ||||  |||| ||||||||||| | |||||||| |||| ||||||||    
T  28909548 tctatggtggaccaaccttaagagtggttcaccacagatatttggggttaaacttaa--gtcagagatttatttgaccaacggagacaaacgtgagggac 28909645  T
Q  253 caaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggac 312  Q
    |||||| |  | ||||||| || || ||||||||||||||||  |||||| |||||||||    
T  28909646 caaaacatgagttttattagttatgggaccaaaatgaaaactgaaaattaattagaggac 28909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 55328358 - 55328425
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatctta 332  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||  ||| |||||||||||||| ||||    
T  55328358 tttattaattatgagatcaaaatgaaaacttgaaattaattaggagactaatggatcaaataagctta 55328425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 42592778 - 42592693
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaa 174  Q
    |||||||||| ||||| |||||| ||||||||||| || |||||||||||||||| |||  ||||||||  || ||||| ||||||    
T  42592778 gaagatctaatggtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaa 42592693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 8796366 - 8796418
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||    
T  8796366 tttattaattgtgagactaaaataaaaatttgaaattatttagatgaccaatg 8796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 20314737 - 20314809
Alignment:
Q  186 catagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaa 257  Q
    |||||||||||| ||||||| |||||||||| | ||||||||| | ||| |||| ||||||||||||||||||    
T  20314737 catagacatttggagttaaacttaacagtcatgaatttatttgactaacagagacaaacttgagggaccaaaa 20314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 3209984 - 3210046
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||| |||||||||||||| || ||||||||||  |||||| || |||||||||    
T  3209984 tttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataa 3210046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 8795986 - 8795932
Alignment:
Q  282 caaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||| | ||||||    
T  8795986 caaaatgaaaacttgaaattatttaggggatcaatggatctaataagcctatttt 8795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 327
Target Start/End: Original strand, 23443394 - 23443572
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaag-ttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgag 248  Q
    |||||||||| ||||| | |||||||  || | ||| |||||||||||  | ||||| ||||||   | |||||||||||||||| ||  ||||  |||     
T  23443394 aaggtctatggtggactacttttaagattgattcacaatagacatttgggggttaaacttaacaccaatgatttatttggcaaacagaagaaaagatgaa 23443493  T
Q  249 ggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||  ||| ||||| |||||||||| || |||||||||||||| || |||||| |||  ||| || ||||||||||||    
T  23443494 ggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattggatcaaataa 23443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 26886407 - 26886298
Alignment:
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
    ||||||| ||| || |||||||||  |||||||||||||||| |||| |||| ||||||| ||||||      |||||||||||| ||||||||||||||    
T  26886407 catttgaggttgaaattaacagtcg-gatttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgttagaccaaaatgaaa 26886309  T
Q  292 acttgaaatta 302  Q
    |  ||||||||    
T  26886308 atatgaaatta 26886298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 3807980 - 3808048
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaat 287  Q
    ||||||||||||||| | ||||||  ||| |||| |||||||  | |||||||||||||||||||||||    
T  3807980 atttatttggcaaactgtgaaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaat 3808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 53614213 - 53614363
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatt---tgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| || |||||||||||||||   ||  |||||| ||||| | |  |||||||||||||||  ||| ||||  ||||||    
T  53614213 tctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gcctggatttatttggcaaatagaggaaaatgtgaggg 53614311  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    || ||||||   | ||||||||||||| ||||||||| |||||  |||||||    
T  53614312 actaaaacgccagttttattaattgtgggaccaaaataaaaacaagaaatta 53614363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 12105353 - 12105313
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  12105353 tttattaattgtggggccaatatgaaaacttgaaattattt 12105313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 38247482 - 38247586
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||| |||||||||||| |  |||  | ||| ||||||| ||||| ||||||| || |  |||||||||||||| | ||||||| |||  |||||||||    
T  38247482 gatttttttggcaaacggtgtgaaaactaaggaaccaaaatgtacgttttattacttatatgaccaaaatgaaaattggaaattaattaagggaccaatg 38247581  T
Q  318 gatca 322  Q
    |||||    
T  38247582 gatca 38247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 43346365 - 43346433
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacattt 196  Q
    |||||||||||| |||||||  |||||||||| |||||||  | ||| | ||||||||| |||||||||    
T  43346365 ggttaaaattaaaaaatttagtaaggtctatggtggaccacctataatgttggtccaccttagacattt 43346433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 44182391 - 44182323
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaat 287  Q
    ||||||||||||||| | | ||||  ||| |||| |||||||  | |||||||||||||||||||||||    
T  44182391 atttatttggcaaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaat 44182323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 53622822 - 53622700
Alignment:
Q  171 ttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgattt 267  Q
    |||||| |||||||||||||||||   |||  |||||| ||||| ||   |||||| ||||||||||||| ||||  | ||||| |||||  ||   |||    
T  53622822 ttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatatttttt 53622723  T
Q  268 attaattgtgagaccaaaatgaa 290  Q
    |||||||||| ||||||||||||    
T  53622722 attaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 43459694 - 43459456
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| |||  |||||||| |||| |||| |||||||| || ||||||||    
T  43459694 gaagatctaacggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccat 43459595  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||| ||||||| ||||||| | ||||||||||||||||||||| ||||| ||||||||  ||||| ||| ||||||||||||| ||||||||||    
T  43459594 agacatttggagttaaacttaacagccgagatttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatg 43459495  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  43459494 aaaacttgaaattatttaggggactaatggatcaaataa 43459456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 32256273 - 32256510
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| |||||| |||| || |||||||||||||||| | || ||||| ||  |||||||| |||||| | |||||||||||    
T  32256273 gaagatctaacggtcccttttatgataaatggatcgaacggttaaaattaacaaaat-attaaggtttacaatggaccacttttaatgttggtccaccat 32256371  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||||||||||||||||| ||    |||||||||||||| |||| ||||  ||||||||||||| ||||  |||||||||| || ||||||||||    
T  32256372 agacatttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaaggtacattttattaattatgggaccaaaatg 32256471  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||||||   |||||| ||||||||||||    
T  32256472 aaaacttgaaattatttgagggaccattggatcaaataa 32256510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 47454537 - 47454338
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttg 227  Q
    |||||||||||| ||| |||  |||||||| ||||||||| | |||||| ||||| |||||||||||||  |||||||||||| ||||  ||||||||||    
T  47454537 ggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacatttagagttaaagttaatagtcgggatttatttg 47454438  T
Q  228 gcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||   |||||| ||||||||||||    
T  47454437 gcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttgagggaccactggatcaaataa 47454338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 89 - 315
Target Start/End: Complemental strand, 11501419 - 11501193
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||| ||||||| ||||||||||| || |||||||||||||||| |||  ||||||||  ||| |||| |||||||| |||||||||||    
T  11501419 gaagatctaatggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccat 11501320  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||||  |||||||| |||| |     |||||||| |||| ||||||||||    
T  11501319 agacatttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgctatttttattaactgtgggaccaaaatg 11501220  T
Q  289 aaaacttgaaattatttagaggaccaa 315  Q
    ||||| |||||||| ||| ||||||||    
T  11501219 aaaacatgaaattaattaaaggaccaa 11501193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 22337248 - 22337401
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||  |||||||| | || || |  ||||||| |||||||||||    
T  22337248 gaagatctaacggtcccttttatgataaatagatcgaaatgttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccat 22337347  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaa 242  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||    
T  22337348 agacatttgaagttaaatttaacggtcaggatttatttggcaaacggaggaaaa 22337401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 22538729 - 22538938
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    |||||||||||||||||||||||| |||||| || | || |||| |||||| |||   ||||||| ||| ||||  |||||| | |||| |||||||||     
T  22538729 atctaacggtcccttttatcataattagatcgaatgattgaaataaacaaaattaatgaggtctacgatagaccgcttttaatgttggtacaccatagat 22538828  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| ||||  |||||||| |||||||    ||||||||||||| |||||||| |||||    
T  22538829 atttggagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaa 22538928  T
Q  293 cttgaaatta 302  Q
    | ||||||||    
T  22538929 catgaaatta 22538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 320
Target Start/End: Original strand, 41079716 - 41079942
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    |||||||| | |||||||| ||||||||||  || ||||||||| |||||| |||  |||||||| ||||||||| |||||| | || |||||||||||     
T  41079716 atctaacgattccttttatgataaatagattgaatggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccaccatagat 41079815  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||||||||| ||   ||||||||| |||||||||| ||||  | ||||||||||||||||| |||||| |||||| ||||||||| ||||    
T  41079816 atttggagttaaagttaacggtagggatttatttagcaaacggaggaaaagataagggaccaaaacgtacgttttatt-attgtgggaccaaaataaaaa 41079914  T
Q  293 cttgaaattatttagaggaccaatggat 320  Q
     | ||||||| ||   ||||||||||||    
T  41079915 atggaaattaattgagggaccaatggat 41079942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 129 - 327
Target Start/End: Original strand, 6173369 - 6173565
Alignment:
Q  129 gttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttgg 228  Q
    ||||| ||||||||| |||| |||||||| ||||||||| |||||| | |||||||| ||||| ||||  |||||||||||| ||    |||||||||||    
T  6173369 gttaagattaacaaaattat-aaggtctacgatggaccacttttaaagttggtccactatagatatttagagttaaagttaatagatg-gatttatttgg 6173466  T
Q  229 caaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||| ||||  ||||||||||||| ||||| |||||||||| || |  ||||||||||||||||||||||||   |||||| ||||||||||||    
T  6173467 caaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 6173565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 307
Target Start/End: Original strand, 47060404 - 47060570
Alignment:
Q  141 aaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaa 240  Q
    |||||||  |||||||||| ||||| | | |||||| |||||||||||| |||||||  |||||| |||||||||  ||||||||||||||||||| |||    
T  47060404 aaatttaataaggtctatggtggactattcttaaggttggtccaccatatacatttggtgttaaacttaacagtccggatttatttggcaaacggaaaaa 47060503  T
Q  241 aacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttag 307  Q
    |   ||||||||||||||||||| |||||||||| |  ||||||||||||||||| |||||| ||||    
T  47060504 agggtgagggaccaaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaattag 47060570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 150 - 327
Target Start/End: Original strand, 47456320 - 47456490
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa-gttaacagtcaagatttatttggcaaacggagaaaaacttgag 248  Q
    |||||||||||||||||| |||||| | || |||||||||||        |||||| |||||||||| ||||||||||||||||| ||  ||||  ||||    
T  47456320 aaggtctatgatggaccacttttaaagttgttccaccataga--------gttaaaagttaacagtcgagatttatttggcaaacagaagaaaaaatgag 47456411  T
Q  249 ggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||   |||||| ||||||||||||    
T  47456412 ggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 47456490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 136 - 327
Target Start/End: Original strand, 40509658 - 40509849
Alignment:
Q  136 ttaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacg 234  Q
    |||| ||||| |||||| |||||| ||||||| | |||||| |||||||| |||||||||||  |||||| ||||||   || ||||||||||| |||||    
T  40509658 ttaaaaaattaatgaag-tctatggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaatgatttatttggtaaacg 40509756  T
Q  235 gagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||| ||||  ||||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| || | |||||||    
T  40509757 gaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattgaaacaaataa 40509849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 32603044 - 32602934
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||||| |||||||||| || ||||||||| |||||||||||||||||  |||||||||    
T  32603044 agatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaat 32602945  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  32602944 ggatcaaataa 32602934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 40812491 - 40812703
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaat---ttatgaaggtctatgatggaccaattttaaggctggtccaccata 189  Q
    ||||||||||||||||||  ||||||||||| || | ||||||||||||||    |||  ||| |||| |||||| || |||||||| |||||||||||     
T  40812491 atctaacggtcccttttaagataaatagatcgaacgattaaaattaacaaaaaaattaataagatctacgatggatcacttttaaggttggtccaccatg 40812590  T
Q  190 gacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatga 289  Q
    |  ||||| ||||||||| |||||||  ||| |||||| ||||| ||| ||||  ||||||| ||||||||||| |||||||||| ||  ||||||||||    
T  40812591 gttatttggagttaaagtaaacagtcgggatatatttgacaaacagaggaaaatatgagggagcaaaacgtacgttttattaattatggaaccaaaatga 40812690  T
Q  290 aaacttgaaatta 302  Q
    |||| ||||||||    
T  40812691 aaacatgaaatta 40812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 200 - 332
Target Start/End: Original strand, 45455360 - 45455492
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||| ||||||| || |||||||||||||||||||||||||  ||||||| ||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  45455360 gttaaacttaacagccatgatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaa 45455459  T
Q  300 ttatttagaggaccaatggatcaaataatctta 332  Q
    ||| |||  ||||||  ||||||||||| ||||    
T  45455460 ttaattaagggaccatcggatcaaataagctta 45455492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 30333395 - 30333296
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||| ||||||||||||||  |||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatg 30333296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 327
Target Start/End: Complemental strand, 40508526 - 40508379
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgag 279  Q
    |||||||||||||||||   ||||| ||||||   ||| ||||||||||| ||||||| ||||  ||||||||  ||||||||| ||||||||||||| |    
T  40508526 tccaccatagacatttgggattaaacttaacaccgaaggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtggg 40508427  T
Q  280 accaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    || ||||||||||||||||||||||||| |||||| ||||||||||||    
T  40508426 acaaaaatgaaaacttgaaattatttaggggaccattggatcaaataa 40508379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 327
Target Start/End: Original strand, 4299972 - 4300163
Alignment:
Q  136 ttaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacg 234  Q
    |||| ||||| |||||| |||||| ||| ||| | |||||| || ||||| |||||| ||||  |||||| ||||||   || ||||||||||||||||     
T  4299972 ttaaaaaattaatgaag-tctatggtgggccactcttaaggttgatccactatagacgtttggggttaaacttaacaccgaaagatttatttggcaaaca 4300070  T
Q  235 gagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||| ||||  ||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||| | ||||||||||||    
T  4300071 gaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcaggggacgattggatcaaataa 4300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 47059288 - 47059109
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaag--ttaaagttaacagtcaagatttatttggcaaacggagaaaaacttga 247  Q
    |||||||||| ||| | | | |||||| || |||||||||||| |||| ||  ||||| ||||| |||| |||||||||||||||||||| ||||  |||    
T  47059288 aaggtctatggtgggctactcttaaggttgctccaccatagacttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtga 47059189  T
Q  248 gggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||| ||||||||||  ||||||||||||  ||||||||||||||||| |||||| |||| |||||| || ||| |||||    
T  47059188 gggatcaaaacgtacattttattaattgtaggaccaaaatgaaaacttaaaattaattaggggaccattgaatctaataa 47059109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 136 - 305
Target Start/End: Original strand, 22115088 - 22115257
Alignment:
Q  136 ttaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacg 234  Q
    |||| ||||| |||||| |||||| ||||||| | |||||| |||||||| |||||||||||  |||||| ||||||   || |||||||||||  ||||    
T  22115088 ttaaaaaattaatgaag-tctatggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaangatttatttggtnaacg 22115186  T
Q  235 gagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||| ||||  ||||| ||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  22115187 gaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 22115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 336
Target Start/End: Complemental strand, 30310270 - 30310113
Alignment:
Q  180 gtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtga 278  Q
    ||||||||||||||||||  |||||  |||||||||  | ||||||||||||||||||| ||||  ||||| ||  ||| ||||| |||||||||||||     
T  30310270 gtccaccatagacatttggggttaactttaacagtctgggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgtgg 30310171  T
Q  279 gaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
    ||| ||||||||||||||||||||||||  |||| | |||||||||||| | ||||||    
T  30310170 gacaaaaatgaaaacttgaaattatttaagggactattggatcaaataagcctatttt 30310113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 9662144 - 9662339
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||||||||| | ||||| || |||||||||| ||||| |  | ||| | |||||||||||||||||||||||||||| |||||||||  |    
T  9662144 agatcaaatggttaaaattgaaaaattaat-aaggtctatggtggactatctataatgttggtccaccatagacatttgaagttaaatttaacagtctgg 9662242  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||||| |  ||||||| |||| |||||||||||||| |  | ||| ||| || ||  || || ||||||||||||||||| ||||||||||||    
T  9662243 atttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaattaattagaggaccaa 9662339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 162 - 327
Target Start/End: Original strand, 33779036 - 33779199
Alignment:
Q  162 ggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacggagaaaaacttgagggaccaaaacgt 260  Q
    |||||| | |||||| ||||||||||||||||||||  |||||| ||||||| ||| |||||||| ||    ||||| ||||   ||||||| |||||||    
T  33779036 ggaccactcttaaggttggtccaccatagacatttgtggttaaacttaacagccaaagatttattgggg---cggaggaaaaagcgagggactaaaacgt 33779132  T
Q  261 acgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
      | ||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  33779133 gagttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataa 33779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 119 - 315
Target Start/End: Complemental strand, 3413742 - 3413545
Alignment:
Q  119 agatctaaaggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    ||||| || |||||||||| || ||||| |||||| |||||| ||||| | | |||||  || |||||||||||||| |||||||||| |||||||| |     
T  3413742 agatcaaacggttaaaatttaaaaaattaatgaag-tctatggtggacaactcttaagattgatccaccatagacatctgaagttaaacttaacagttag 3413644  T
Q  218 g-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    | ||||||||||||||| ||| ||||  |||||||| ||||||     ||||||||||||  |||||||||||||||  ||||||||||||||||||||    
T  3413643 ggatttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaattatttagaggaccaa 3413545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 43460763 - 43460916
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| | |||| | |||||||||||||||||  ||  ||||||| ||||| || | ||||||||||||||| |||| ||||  |||||||    
T  43460763 tctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtgaggatttatttggcaaatggaggaaaaagtgaggga 43460862  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    | |||| ||||| ||||||||||||| ||||||||||||||||| |||| ||||    
T  43460863 ctaaaatgtacgttttattaattgtgggaccaaaatgaaaacttcaaataattt 43460916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 11344651 - 11344523
Alignment:
Q  182 ccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgaga 280  Q
    |||||||||| |||||| |||||| ||||||   || |||||||||| |||||||||||||   ||| ||||  ||||||||| ||||||||||||| ||    
T  11344651 ccaccatagatatttgaggttaaacttaacaccgaaagatttatttgacaaacggagaaaa---tgaaggacttaaacgtacgttttattaattgtggga 11344555  T
Q  281 ccaaaatgaaaacttgaaattatttagaggac 312  Q
    |||||||||||||||||||||||| |||||||    
T  11344554 ccaaaatgaaaacttgaaattattcagaggac 11344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 13563052 - 13562848
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||| ||  | || ||         || |||| |||||||| |||||||  ||    
T  13563052 gaagatctaacggtcccttttatgataaatagatcaaacggttaaaattaataaggtcatcaa---------tgaaccacttttaaggttggtccattat 13562962  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||||||||||||||||||| ||  ||||||||||| |||| ||||||||  |||||||| ||||||     ||||||| ||||| |||||||||     
T  13562961 agacatttgaagttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgccatttttattacttgtgggaccaaaata 13562862  T
Q  289 aaaacttgaaatta 302  Q
    |||||  |||||||    
T  13562861 aaaacaagaaatta 13562848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 30311475 - 30311584
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||| ||||| ||| ||||||||  ||||||||  ||||||| | ||||||||||||| |||||||||||||| |||||||||||||| |||| ||||    
T  30311475 gatttaattggctaacagagaaaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatg 30311574  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  30311575 gatcaaataa 30311584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 45454148 - 45454039
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||| ||||  |||||||| |||||||| | |||||||||| |||||||||||||||||| |||||||| |||| |||||| |     
T  45454148 gatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggaccattt 45454049  T
Q  318 gatcaaataa 327  Q
     |||||||||    
T  45454048 aatcaaataa 45454039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 32255166 - 32255012
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| |||||||||||| ||||   |||  |||||| ||||| |||  |||||||||||||||||||| ||||  ||||||    
T  32255166 tctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggatttatttggcaaacggaggaaaaagtgaggg 32255067  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    | ||||| ||||| |||||||||| || ||||||||| |||| ||||||||||||    
T  32255066 atcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattattt 32255012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 30334648 - 30334746
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    |||||||||||||||||||  |    ||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||    
T  30334648 atttatttggcaaacggaggga----tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattagttaggggaccaatgg 30334743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 33096979 - 33096870
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||| ||||  ||||||||||||| ||| | ||||||||||||| | | ||||||| |||||||||||||||   |||||| ||    
T  33096979 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccattg 33096880  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  33096879 gatcaaataa 33096870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 24282944 - 24283090
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgag 279  Q
    |||||||||||||||||  |||||||||||||  ||  |||||||||||||||||||| ||||  |||||||| ||| ||  |  ||| |||||||||      
T  24282944 tccaccatagacatttggggttaaagttaacacccatggatttatttggcaaacggaggaaaatgtgagggactaaagcg-cctgttttttaattgtgga 24283042  T
Q  280 accaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||  ||||||||||| ||| ||||| |||||||||||    
T  24283043 accaaaatgaaaatctgaaattatttggagaaccaacggatcaaataa 24283090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 4298823 - 4298714
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||| ||| ||||  ||||||||  ||||  ||  ||||||||||||| || |||||| ||||||| ||||||||||| |||||| ||    
T  4298823 gatttatttggcaaacagaggaaaaagtgagggacttaaacccacattttattaattgtgggatcaaaataaaaacttaaaattatttaggggaccattg 4298724  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  4298723 gatcaaataa 4298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 13564179 - 13564329
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatt---tgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| || |||||||||||||||   ||  |||||| ||||| |||  |||||||||||||||||||| ||||  ||||||    
T  13564179 tctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaac-gtcgggatttatttggcaaacggaggaaaatgtgaggg 13564277  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    || ||||||   | ||||||||||||| |||||||||||||||  |||||||    
T  13564278 actaaaacgccagttttattaattgtgggaccaaaatgaaaacaagaaatta 13564329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 22336155 - 22336005
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccataga--catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| |||||||| || ||||||||||   ||||||  |||||| |||||| ||  |||||||||||||||| ||| ||||  |||||||    
T  22336155 tctatggtggaccacttttaaggttgatccaccatagcatcatttggggttaaacttaacattcgggatttatttggcaaactgaggaaaaggtgaggga 22336056  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    | ||||||     ||||||||||||| |||||||||||||||  |||||||    
T  22336055 ctaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaatta 22336005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 11502361 - 11502525
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| ||||| |||||||||||   |||| |||||| ||||| ||   |||||||||||||||| ||| |||| |||||||    
T  11502361 tctatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatttatttggcaaacagagcaaaagttgaggg 11502460  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    || ||  || |   |||||||| |||| || |||||||||||| |||||||| ||| ||||||||    
T  11502461 actaattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaattagttaaaggaccaa 11502525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 24281185 - 24281091
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacg-tacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagagga 311  Q
    |||||||||||| |||||| ||||| ||||||||| |||||| |    ||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  24281185 gatttatttggcgaacggataaaaaattgagggactaaaacgcttgtttttattaattgtgggaccaaaataaaaacatgaaattatttagagga 24281091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 15992293 - 15992247
Alignment:
Q  171 ttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15992293 ttaaggttggtccaccatagacatttgaggttaaagttaacagtcaa 15992247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 22690509 - 22690400
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||||||||||| ||||| |||  ||||||||||||||||| | | |||||  ||| |||||||||| |   |||||||||||||  || |||    
T  22690509 atagacatttgaagttaaaattaactgtccgagatttatttggcaaacaggggaaaacccgagagaccaaaacggaacttttattaattgtggaacaaaa 22690410  T
Q  286 atgaaaactt 295  Q
    ||||||||||    
T  22690409 atgaaaactt 22690400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 3414840 - 3414934
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggac 312  Q
    ||||||||||||||| |||| ||||  ||| |||| ||||||     |||||||||| || ||||||||||||||| ||||||||||||| ||||    
T  3414840 gatttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattatttaggggac 3414934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 24844399 - 24844330
Alignment:
Q  190 gacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacg 259  Q
    ||||||||| |||||| |||||||| | |||||||||||||||||||  ||||  |||||||| ||||||    
T  24844399 gacatttgaggttaaacttaacagtgaggatttatttggcaaacggaagaaaatgtgagggactaaaacg 24844330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 40811394 - 40811341
Alignment:
Q  274 tgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||| |||||||||||||||||||||||||||   |||||| ||||||||||||    
T  40811394 tgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataa 40811341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 669295 - 669386
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    ||||| || |||| ||||||||||| |||  | | |||||| ||||||| | |||||  ||||||||||||||||||||| ||||||||||||    
T  669295 agatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaaga-tggtccaccatagacatttgaggttaaagttaac 669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 22537694 - 22537595
Alignment:
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
    ||||||| |||||| ||||||||   |||||||||||||||| |||| |||| ||||||| ||||| ||    |||| |||||||| |||||||||||||    
T  22537694 catttgaggttaaaattaacagttg-gatttatttggcaaacagagacaaacgtgagggatcaaaatgtcatttttagtaattgtgggaccaaaatgaaa 22537596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 25533317 - 25533214
Alignment:
Q  200 gttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaa 298  Q
    |||||| |||||||||| ||||||||||| |  ||||||| | | |||| |||||||||| |    ||||||| || || ||||||||||||||||||||    
T  25533317 gttaaacttaacagtcagagatttatttgaccgacggagatacaattgaaggaccaaaacatgaattttattagttatgggaccaaaatgaaaacttgaa 25533218  T
Q  299 atta 302  Q
    ||||    
T  25533217 atta 25533214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 327
Target Start/End: Original strand, 35664286 - 35664396
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||||| ||||||||||||||| |||  | ||||||||||| |||   ||||||| || || || ||||||||||| | ||||||| |||  ||| ||||    
T  35664286 agatttttttggcaaacggagataaaactaagggaccaaaaggtattttttattacttatgggatcaaaatgaaaaatggaaattaattaagggatcaat 35664385  T
Q  317 ggatcaaataa 327  Q
    ||||| |||||    
T  35664386 ggatctaataa 35664396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 40738844 - 40738942
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacg-atttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||| ||| ||||  |||||||| ||||||   |  |||||||||| || ||||||||| ||||| ||||||| ||||| |||||||    
T  40738844 gatttatttggcaaacagagcaaaaagtgagggactaaaacgcctgtttttattaattatgggaccaaaataaaaacatgaaattgtttaggggaccaa 40738942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 44554687 - 44554764
Alignment:
Q  132 aaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaa 210  Q
    |||||||||||| |||  ||| |||| | ||||||| || ||| | |||||||||||||||||||| ||||||||||||    
T  44554687 aaaattaacaaaattaataagatctacggtggacca-ttataatgttggtccaccatagacatttggagttaaagttaa 44554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 46835786 - 46835676
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||| ||||| ||| |||| ||||| |||  |||  |||  ||||||||||||  ||| |||| ||||| |||||||||||||  |||||| |    
T  46835786 agatttatttgacaaacagaggaaaaattgagagacttaaaaatacattttattaattgtaggactaaaaagaaaatttgaaattatttaagggaccatt 46835687  T
Q  317 ggatcaaataa 327  Q
    |||||| ||||    
T  46835686 ggatcatataa 46835676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 2414920 - 2414863
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    |||||| ||||||| |||||||| |||||||  |||||||||||  ||||||||||||    
T  2414920 tctatggtggaccacttttaaggttggtccattatagacatttggggttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 39981492 - 39981431
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacattt-gaagttaaagttaacagt 214  Q
    |||||| ||||||| |||||| | ||||||||||||||||||| |  |||||||||||||||    
T  39981492 tctatggtggaccatttttaaagttggtccaccatagacatttgggggttaaagttaacagt 39981431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 16756031 - 16755987
Alignment:
Q  169 ttttaaggctggtccaccatagacatttgaagttaaagttaacag 213  Q
    |||||||| || | |||||||||||||||| ||||||||||||||    
T  16756031 ttttaaggttgtttcaccatagacatttgaggttaaagttaacag 16755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 89 - 323
Target Start/End: Complemental strand, 45279919 - 45279685
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||||| |||| |||||||| ||| ||||| ||||||| ||||||||||||    
T  45279919 gaagatctaacgatcccttttatcataaatagatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccat 45279820  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | ||||||  ||||||||||||| |||  |||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||||  ||| ||||||    
T  45279819 atacatttagagttaaagttaaccgtcgggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaattgtatgactaaaatg 45279720  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaa 323  Q
    |||| ||||||||||||| | ||| |||| |||||    
T  45279719 aaaatttgaaattatttaaaagacaaatgaatcaa 45279685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 41629947 - 41629709
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||| ||||||| ||||||| ||  || |||||||||||||||| |||  ||||| || |||| |||| |||||||| |||| ||||||    
T  41629947 gaagatctaatggtctcttttatgataaataaattgaatggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccat 41629848  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||| |||| |||| |||||||| |||  |||||||||||||||||||  ||||||||||||| |||||  |||| |||||||||||||||||||||||     
T  41629847 agacttttggagttcaagttaacggtcgggatttatttggcaaacggaagaaaacttgagggatcaaaatatacgttttattaattgtgagaccaaaata 41629748  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  41629747 aaaacttgaaattatttaggggactaatggatcaaataa 41629709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 42099987 - 42100196
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    |||||||||| |||||||| ||||||||||| || |||||||||||||||| |||  |||||||| ||||||||| |||||||| |||||||||| ||||    
T  42099987 atctaacggttccttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagac 42100086  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    |||||||||||||||||||||||  || ||||||||||||||||| ||||  ||||||| |||||||     ||||||||||||||||||||||||||||    
T  42100087 atttgaagttaaagttaacagtcgggaattatttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaa 42100186  T
Q  293 cttgaaatta 302  Q
    | ||||||||    
T  42100187 catgaaatta 42100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 32797380 - 32797139
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||| ||||||| ||||||||||| || |||||||||||||||| |||  |||||||| |||| |||| |||||||| || |||| |||    
T  32797380 gaagatctaacggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatgaaccatttttaaggttgatccatcat 32797281  T
Q  189 agacatttgaagttaaagttaacagtcaagat---ttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||| ||||||| ||||| | |  |||   |||||||| |||||||| ||||| ||||||||  ||||||||| ||||||||||||| |||||||    
T  32797280 agacatttggagttaaacttaacggccgcgatttattatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaa 32797181  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||||||||||  |||||||| ||||||||||    
T  32797180 atgaaaacttgaaattatttaagggaccaatagatcaaataa 32797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 32694069 - 32693831
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||| ||||||| ||||||||||| || |||||||||||| ||| |||  |||||||||||| | ||| |||||||| ||||||| |||    
T  32694069 gaagatctaatggtctcttttatgataaatagatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcat 32693970  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | |||||| |||||||||||||| ||   |||||||||||||||||||| ||||  ||| |||||||| |||| | ||||||||||||| ||||||||||    
T  32693969 atacatttaaagttaaagttaactgttgggatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatg 32693870  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||| |||||| ||||||||||| || |||||||||    
T  32693869 aaaacttaaaattaattagaggaccattgaatcaaataa 32693831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 13116569 - 13116356
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||  ||  | |||||| ||||||||| | | |||  ||||| |  ||    
T  13116569 gaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattat 13116470  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||| ||||  ||| |||| ||||||     ||||||||||||| ||||||||||    
T  13116469 agacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatg 13116370  T
Q  289 aaaacttgaaatta 302  Q
    ||||| ||||||||    
T  13116369 aaaacatgaaatta 13116356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 30786887 - 30786677
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa--gttaacagtca 216  Q
    ||||| || |||||||||||||||| |||  ||||| |||||||||||| |||||| | || ||||||||||||||||  |||||||  ||||||||||     
T  30786887 agatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacatttagagttaaaaagttaacagtcg 30786788  T
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
      ||||||||||||||||||||||||  ||||||| |||||  |||| |||||||||| || || |||||||||||||| |||||||||  ||||||| |    
T  30786787 gaatttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggaccatt 30786688  T
Q  317 ggatcaaataa 327  Q
    | |||||||||    
T  30786687 gaatcaaataa 30786677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 6397992 - 6397784
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||| ||||||| ||| |||  |||||||||| ||||||| | | |||| ||||  |||||||  ||||| ||||||| |||||| ||| |    
T  6397992 agatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatagttatttggagttaaatttaacattcatg 6397893  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    ||||||||||||||||||||||||  |||||||| |||| ||| | ||||||||||||| ||||||||||||||  |||||||||||||| ||  |||||    
T  6397892 atttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaatatgaaattatttagaagattaatgg 6397793  T
Q  319 atcaaataa 327  Q
    |||||||||    
T  6397792 atcaaataa 6397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 42872131 - 42872313
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| | ||||| | |||||| ||||| ||||||||||||||| |||||||||||| |||| |||||||||| ||||||||| ||||  ||| ||||     
T  42872131 tctatggtagaccactcttaaggttggtctaccatagacatttgaggttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggact 42872230  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
    |||||||||| |||||| ||| |||||  ||||||||||||| ||||||||||  |||||| |||||||||||| | ||||||    
T  42872231 aaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataagcctatttt 42872313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 327
Target Start/End: Original strand, 8571536 - 8571732
Alignment:
Q  133 aaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag--atttatttggca 230  Q
    ||||||| || ||||  ||||| |||| ||||||| |||||| | ||||||||||||||||||||  |||||| ||||||| | ||  |||||||||| |    
T  8571536 aaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacatttggggttaaacttaacagactagggatttatttggta 8571635  T
Q  231 aacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||  ||| ||||||||||||||| ||||||||||||  ||||||||||||||  |||||||| ||||  ||||||| ||||||||||    
T  8571636 aacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaatgtgaaattagttaggagaccaatagatcaaataa 8571732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 32798472 - 32798647
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| | |||||| || ||||||||||||||  ||  ||||||| ||||| || | |||||||||| |||||||||||||| ||||||||    
T  32798472 tctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtgaggatttatttgacaaacggagaaaaaattgaggga 32798571  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    | |||| ||||| ||||||||||||| |||||||||||||||||||||||||||   |||||| || |||||||||    
T  32798572 ctaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgcatcaaataa 32798647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 32695214 - 32695390
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||||| |||||  |||| ||||||||||||   |||  |||||| ||||| |||| || | ||||||||||| ||| ||||| ||| ||    
T  32695214 tctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaacgtgaagg 32695313  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||    
T  32695314 acttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccaatgaatcaaataa 32695390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 22551216 - 22551030
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||| ||||||  |||||||  ||||| |||| |||| || |||||||| | |||||||||||| |||||  |||||| |||||| || ||    
T  22551216 agatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttgtccaccatagagatttggggttaaacttaacaatccag 22551117  T
Q  219 -atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
     |||||||||||||| ||||||||| | ||||||||||||  |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  22551116 gatttatttggcaaatggagaaaaagt-gagggaccaaaagatacgttttattaattgtgggaccaaaataaaaacttgaaattattt 22551030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 8570228 - 8570119
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||| |||| |||||| ||    
T  8570228 gatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccattg 8570129  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  8570128 gatcaaataa 8570119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 119 - 327
Target Start/End: Complemental strand, 42871025 - 42870814
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtc 215  Q
    ||||| || |||| ||||||  |||||||  |||||||| | ||||||| | |||||  |||||||| ||||||||   |||  |||||| |||||||||    
T  42871025 agatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtc 42870926  T
Q  216 aagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    | |||| ||| ||||||| ||  ||||  | |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||   ||||     
T  42870925 aggattcattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggaaaccat 42870826  T
Q  316 tggatcaaataa 327  Q
    ||||||||||||    
T  42870825 tggatcaaataa 42870814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 113 - 327
Target Start/End: Original strand, 44076261 - 44076478
Alignment:
Q  113 ataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagtta 209  Q
    ||||||||||| || |||| ||||||| ||| |||  ||| | |||| |||| || |||||| | || ||||||||||||||   |||  |||||| |||    
T  44076261 ataaatagatcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaactta 44076360  T
Q  210 acagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagag 309  Q
    || ||   |||||||||||||||||||| |||| |||||| |||||||  |||| ||||||||||||| ||||||||| |||| ||||||||||||   |    
T  44076361 actgtagggatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagg 44076460  T
Q  310 gaccaatggatcaaataa 327  Q
    ||||| ||||||||||||    
T  44076461 gaccattggatcaaataa 44076478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 26696642 - 26696533
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||||||| |||| ||||  ||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||| |||| |||||| ||    
T  26696642 gatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccattg 26696543  T
Q  318 gatcaaataa 327  Q
     |||||||||    
T  26696542 aatcaaataa 26696533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 42877793 - 42877645
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| ||||||| | |||||| |||||||||||| |||||||  |||||||||||| |||  |||||||||| |  ||| ||| |||| |||||||||    
T  42877793 tctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgggatttatttgactgacgaagacaaacgtgagggacc 42877694  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||||| |  | ||||||| || |||||||||||||||||||||||||||    
T  42877693 aaaacatgagttttattagttatgagaccaaaatgaaaacttgaaatta 42877645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 4810597 - 4810470
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||||||||| |||  ||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||| || ||||||||| |||| ||||||    
T  4810597 gttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaatttgaaa 4810498  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
     |||||   |||||| | ||||||||||    
T  4810497 gtatttgagggaccattagatcaaataa 4810470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 321
Target Start/End: Complemental strand, 28418936 - 28418813
Alignment:
Q  199 agttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttga 297  Q
    ||||||||||||||||   ||||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||||||||| ||||    
T  28418936 agttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattga 28418837  T
Q  298 aattatttagaggaccaatggatc 321  Q
    |||||||||  |||||||||||||    
T  28418836 aattatttaagggaccaatggatc 28418813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 28420148 - 28420283
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  ||||||||||||||||   ||||||||||| ||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  28420148 atagacatttagagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 28420247  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||||||||    
T  28420248 atgaaaaattgaaattatttaagggaccaatggatc 28420283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 30787516 - 30787693
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttg 227  Q
    |||||| ||||||||| || | | | |||| |||| |||| |||||| | |||||||| ||| ||||||  ||||||||||||||  || ||||||||||    
T  30787516 ggttaagattaacaaaattctaaggttctacgatgaaccatttttaaagttggtccactataaacatttagagttaaagttaacatacaggatttatttg 30787615  T
Q  228 gcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    |||||||||  ||||  |||||||||||||  ||   |||||||||| || ||||||||||||||||| |||||||||    
T  30787616 gcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaattattt 30787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 17338187 - 17338067
Alignment:
Q  182 ccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagac 281  Q
    |||| |||||||||||| ||||||||| ||||  | |||||||||||||||||||||||||  |||||||| ||||||     ||||||||||||| |||    
T  17338187 ccacaatagacatttgaggttaaagttgacagaaacgatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggac 17338088  T
Q  282 caaaatgaaaacttgaaatta 302  Q
    |||||||||||| ||||||||    
T  17338087 caaaatgaaaacatgaaatta 17338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 200 - 336
Target Start/End: Original strand, 6398485 - 6398622
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaact-tgaa 298  Q
    |||||| |||||||||| |||||||||| ||||||||| ||||  |||||||| ||||||   | |||||||||| ||||||||||||||||| | | ||    
T  6398485 gttaaacttaacagtcatgatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaaatctaaa 6398584  T
Q  299 attatttagaggaccaatggatcaaataatcttatttt 336  Q
    ||||||||| ||||||||  ||||||||| ||| ||||    
T  6398585 attatttaggggaccaataaatcaaataaacttttttt 6398622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 42098739 - 42098589
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||| |||||||||| ||||||   |||  |||||| |||||||||  ||||||||||||||||||||| |||| || |||    
T  42098739 tctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtcg-gatttatttggcaaacggagacaaacgtggggg 42098641  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    | |||||||     ||||||||||||| ||||||||||||||| ||||||||    
T  42098640 atcaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 42098589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 211705 - 211617
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||||||||| ||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||||||||    
T  211705 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattta 211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 240551 - 240639
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||||||||| ||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||||||||    
T  240551 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattta 240639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 725328 - 725240
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||||||||| ||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||||||||    
T  725328 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattta 725240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 793906 - 793994
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||||||||| ||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||||||||    
T  793906 gatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattattta 793994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 38696483 - 38696321
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa--gatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| |||||||| ||||| |||||||||||||   |||||| |||| || |||  |||||||||| |  ||||||  ||||||||||||    
T  38696483 tctatggtggaccacttttaaggttggtctaccatagacatttagggttaaacttaatag-caagggatttatttgaccgacggaggcaaacttgaggga 38696385  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||| |  | ||||||| || |||||||||||||||||||| |||||| |||| |||||||    
T  38696384 ccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaattaattaggggaccaa 38696321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 17702241 - 17702379
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtca-agatttattt--ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||||||||||||| |||||||||||| |||| |||||| |||  | |||| |||||  |||||||||||||||||| || | ||||||| || ||    
T  17702241 tccaccatagacatttgaggttaaagttaacggtcagagatttctttttgacaaatggagatgaacttgagggaccaaaacataggttttattagttatg 17702340  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
     |||||||||||||| | ||||||| |||  ||||||||    
T  17702341 ggaccaaaatgaaaattggaaattaattaagggaccaat 17702379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 17339530 - 17339639
Alignment:
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| |||| |     ||||||||||||  ||||||||||||||    
T  17339530 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaa 17339629  T
Q  293 cttgaaatta 302  Q
      ||||||||    
T  17339630 tatgaaatta 17339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 41630130 - 41630239
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||  |||||  ||||||| |||||||||  ||| ||||| ||||||||||||||||| |||||||||| || ||||||||||  | |||| ||    
T  41630130 gatttatttaacaaacatagaaaaaattgagggacttaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttaaggaaccattg 41630229  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  41630230 gatcaaataa 41630239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 327
Target Start/End: Original strand, 212684 - 212827
Alignment:
Q  185 ccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||||||||||||  |||||||||||||  || ||||||||||| |||||| || ||||  |||||||| |||||    | ||| ||||||||| ||| |    
T  212684 ccatagacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacga 212783  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  ||||||||||| | |||| ||||||||||||||    
T  212784 aaatgaaaatctgaaattatttgggggactaatggatcaaataa 212827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 327
Target Start/End: Complemental strand, 239570 - 239427
Alignment:
Q  185 ccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||||||||||||  |||||||||||||  || ||||||||||| |||||| || ||||  |||||||| |||||    | ||| ||||||||| ||| |    
T  239570 ccatagacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacga 239471  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  ||||||||||| | |||| ||||||||||||||    
T  239470 aaatgaaaatctgaaattatttgggggactaatggatcaaataa 239427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 327
Target Start/End: Original strand, 726307 - 726450
Alignment:
Q  185 ccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||||||||||||  |||||||||||||  || ||||||||||| |||||| || ||||  |||||||| |||||    | ||| ||||||||| ||| |    
T  726307 ccatagacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacga 726406  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  ||||||||||| | |||| ||||||||||||||    
T  726407 aaatgaaaatctgaaattatttgggggactaatggatcaaataa 726450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 327
Target Start/End: Complemental strand, 792925 - 792782
Alignment:
Q  185 ccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||||||||||||  |||||||||||||  || ||||||||||| |||||| || ||||  |||||||| |||||    | ||| ||||||||| ||| |    
T  792925 ccatagacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacga 792826  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  ||||||||||| | |||| ||||||||||||||    
T  792825 aaatgaaaatctgaaattatttgggggactaatggatcaaataa 792782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 327
Target Start/End: Original strand, 798808 - 798951
Alignment:
Q  185 ccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacca 283  Q
    |||||||||||||  |||||||||||||  || ||||||||||| |||||| || ||||  |||||||| |||||    | ||| ||||||||| ||| |    
T  798808 ccatagacatttggggttaaagttaacacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacga 798907  T
Q  284 aaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||  ||||||||||| | |||| ||||||||||||||    
T  798908 aaatgaaaatctgaaattatttgggggactaatggatcaaataa 798951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 13197961 - 13198056
Alignment:
Q  232 acggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||| ||||  ||||||||  ||||||||  ||||||||||||| |||||||| ||||||| |||||||||||  |||||| |||| |||||||    
T  13197961 acggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaattatttaatggaccattggagcaaataa 13198056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 26697798 - 26697912
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||||||| |||||||  |||||| |||||| | | |||||||| | |||| |||  ||||  |||||||| |||||||||| |||||||||| ||    
T  26697798 tggtccaccataaacatttggggttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaattatg 26697897  T
Q  278 agaccaaaatgaaaa 292  Q
     ||| ||||||||||    
T  26697898 ggactaaaatgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 41742217 - 41742087
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||||| ||||| |||| |||||||||||| || |||||||||||| |  | | | | |||  |||||||||||||| ||   |||||||||| |     
T  41742217 tggtccaccacagacacttgatgttaaagttaacggttaagatttatttgaccgatgaaaacaaatgtgagggaccaaaacataaattttattaattata 41742118  T
Q  278 agaccaaaatgaaaacttgaaattatttaga 308  Q
    | || |||||||||||||||||||| |||||    
T  41742117 aaactaaaatgaaaacttgaaattaattaga 41742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 45281178 - 45281303
Alignment:
Q  201 ttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaat 300  Q
    ||||||||||| ||   ||||||||||||||| |||| ||||  ||| ||| |||||| ||   ||||||||||||  ||||||||||||||||||||||    
T  45281178 ttaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggatcaaaacatatt-tttattaattgttggaccaaaatgaaaacttgaaat 45281276  T
Q  301 tatttagaggaccaatggatcaaataa 327  Q
    |||||   |||| | ||||||||||||    
T  45281277 tatttgagggactattggatcaaataa 45281303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 10669386 - 10669450
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    |||||| ||||||| | |||||| |||| |||||||||||||||| |||||||||||||| ||||    
T  10669386 tctatggtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaacagccaag 10669450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 24192604 - 24192668
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    |||||| ||||||| | |||||| |||||||||||||||||||   |||||||||||||||||||    
T  24192604 tctatggtggaccactcttaaggttggtccaccatagacatttagggttaaagttaacagtcaag 24192668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 13117639 - 13117723
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||||||||| ||| ||||  |||||||| ||||||     |||||||||| || ||||||||||||||| ||||||||    
T  13117639 gatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaatta 13117723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 41743586 - 41743718
Alignment:
Q  184 accatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagacc 282  Q
    ||||||| || ||| ||||||| ||||||||   |||||| |||| |  ||||||||| | || | |||||||||| || | ||||||| || || ||||    
T  41743586 accataggcacttggagttaaacttaacagtgtgagatttttttgaccgacggagaaacaattaaaggaccaaaacataagttttattacttatgggacc 41743685  T
Q  283 aaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||||||||| |||||| ||| ||||||||    
T  41743686 aaaatgaaaacttaaaattaattaaaggaccaa 41743718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 307
Target Start/End: Original strand, 45437469 - 45437577
Alignment:
Q  200 gttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaa 298  Q
    |||||| |||||||||| | ||||||||| | | |||||  ||||  ||||||||||||| |  | |||||||||| || || |||||||||||||||||    
T  45437469 gttaaacttaacagtcagggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaa 45437568  T
Q  299 attatttag 307  Q
    |||| ||||    
T  45437569 attaattag 45437577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 17455222 - 17455164
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaaca 212  Q
    |||||| ||||||| |||||||  ||||| | |||||| ||||||||||||||||||||    
T  17455222 tctatggtggaccacttttaagattggtctagcatagatatttgaagttaaagttaaca 17455164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 29103597 - 29103527
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||| |||| ||||| ||||  ||||||||  ||| ||||| ||||||||||||| ||||||||||    
T  29103597 gatttatttagcaatcggaggaaaaaatgagggactcaaatgtacgttttattaattgtgggaccaaaatg 29103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 34504669 - 34504755
Alignment:
Q  241 aacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||||||| |  | ||||||| || |||||| ||||| ||||||  |||||| ||||  |||||||||| |||||||    
T  34504669 aacttgagggaccaaaacatgtgttttattagttatgagactaaaataaaaactgaaaattaattaggagaccaatggaccaaataa 34504755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 42362691 - 42362752
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtc 215  Q
    ||||||||| |||| | |||| | ||||||||||||||||| || | |||||||||||||||    
T  42362691 tctatgatgaaccactcttaatgttggtccaccatagacatctggaattaaagttaacagtc 42362752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 29104370 - 29104450
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttga 297  Q
    ||||||||||| ||||| ||| ||||  ||||||||  |||| |||| ||||||||||||| || |||||| |||| ||||    
T  29104370 agatttatttgacaaacagaggaaaaaatgagggacttaaacatacgttttattaattgtgggatcaaaataaaaatttga 29104450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 37400907 - 37400839
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaat 287  Q
    ||||||||||||||| | |  |||| ||| |||| |||||||  | |||||||||||||||||||||||    
T  37400907 atttatttggcaaactgtgggaaacgtgaaggactaaaacgtgagttttattaattgtgagaccaaaat 37400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 42878883 - 42878919
Alignment:
Q  279 gaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||||||||||| |||| |||||||    
T  42878883 gaccaaaatgaaaacttgaaattaattaggggaccaa 42878919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 32470452 - 32470690
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||  ||||||| ||||||||||| || |||||||||||||||| |||  |||||||| ||||||||| |||||||| |  ||||||||    
T  32470452 gaagatctaacggtttcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccat 32470551  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||| ||||||| ||||||| |  |||||||||| ||||||||| ||||| ||||| ||  ||||||||| ||||||||||||| |||||||||     
T  32470552 agacatttggagttaaacttaacagccgggatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtgggaccaaaata 32470651  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  32470652 aaaacttgaaattatttaggggactaatggatcaaataa 32470690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 17460571 - 17460799
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||| ||         |||||| ||| ||||| |||||||  |||||||||||    
T  17460571 gaagatctaacggtcc-ttttataataaatagatcgaatggttaaaattaataa---------ggtctacgatagaccacttttaagattggtccaccat 17460660  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||| |||||||||||||| |||  ||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||| || |||||||    
T  17460661 agacatttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatg 17460760  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  17460761 aaaacttgaaattaattagaggaccattggatcaaataa 17460799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 89 - 257
Target Start/End: Complemental strand, 6028956 - 6028787
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||| ||||||||| ||||||| ||||||||||||    
T  6028956 gaagatctaacggtcccttttatcataaatagatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccat 6028857  T
Q  189 agacatttgaagttaaagttaacagtc-aagatttatttggcaaacggagaaaaacttgagggaccaaaa 257  Q
    | ||||||  ||||||||||||| |||  | |||||||||||||||| ||||||||||||||||||||||    
T  6028856 atacatttagagttaaagttaaccgtcggaaatttatttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 11316111 - 11315934
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagg 249  Q
    |||||||| | ||||||| |||||||| || ||||||||||||||||| | ||||| ||||||| |  |||||||||||||||||||| ||||| |||||    
T  11316111 aaggtctacggtggaccatttttaaggttgatccaccatagacatttggaattaaacttaacagccgggatttatttggcaaacggaggaaaacctgagg 11316012  T
Q  250 gaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  11316011 gacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatgaattaaataa 11315934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 156 - 327
Target Start/End: Complemental strand, 43033254 - 43033083
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaa 255  Q
    |||| ||||||| | |||||| ||||| ||||||||||||||| |||||| ||||||   | |||||||||||||||||||| ||||  |||||||||||    
T  43033254 tatggtggaccactcttaaggttggtctaccatagacatttgaggttaaacttaacatcgaggatttatttggcaaacggaggaaaaagtgagggaccaa 43033155  T
Q  256 aacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    || ||||| ||||||||||||| ||||||||||||||||||||||||||||  ||| || ||||||||||||    
T  43033154 aaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaataa 43033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 1083227 - 1083014
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| ||||| |||||| ||||||||||| || |||||||||||||||| |||  ||||||||  || ||||| |||||||| || ||||||||    
T  1083227 gaagatctaatggtccattttataataaatagatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccat 1083128  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||| ||||  |||||||||||||| |   |||||| ||||||||||||||||||  ||| ||||||||||      |||||||| |||| ||||||||||    
T  1083127 agatatttagagttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaatg 1083028  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  1083027 aaaatatgaaatta 1083014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 17459404 - 17459254
Alignment:
Q  180 gtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||||||||||||||   |||  |||||| |||| |||||  ||||||||||||||||||| ||||  ||||||||  ||||||||| ||||||||||||    
T  17459404 gtccaccatagacatcatttggggttaaacttaaaagtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgt 17459305  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    | ||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  17459304 gtgaccaaaatgaaaacttgaaattatttaagggactaatggatcaaataa 17459254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 43034411 - 43034586
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaa--gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| | |||| | || ||||||||||||||||||   |||||| |||||||  |||||||||||| ||||||||| ||||  |||||||    
T  43034411 tctatggtggaccactcttaaagttgatccaccatagacatttgagaggttaaacttaacagcgaagatttatttgacaaacggaggaaaaagtgaggga 43034510  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||||||||||||   |||||| || |||||||||    
T  43034511 ccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggaccattgaatcaaataa 43034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 28561518 - 28561369
Alignment:
Q  180 gtccaccatagacatttgaagttaaagttaacagtcaag--atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||||||| ||||||  ||||| |||||||||||   ||||||||| |||||| || ||||  |||||||||||||  |||| |||||||||||||    
T  28561518 gtccaccatagatatttgagattaaacttaacagtcaaagaatttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtg 28561419  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||||||| ||||||||||  |||||| || |||||||||    
T  28561418 agaccaaaatgaaaacttaaaattatttaagggaccattgaatcaaataa 28561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 11317308 - 11317483
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| | ||||| | |||||| ||||| |||||||||||  ||  ||||||| ||||| || | |||||||||| ||||||||| |||| ||||||||    
T  11317308 tctatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgaggga 11317407  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||  || | ||||||||||||| |||||||||||||| ||||||||||||   |||||| || |||||||||    
T  11317408 ccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 11317483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 28562716 - 28562924
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || ||||||||||   |||||||  |||||||||| ||||| |  | ||| | |||||||||||| | |||||   ||||| |||||||||  |    
T  28562716 agatcaaagggttaaaattggaaaatttaataaggtctatggtggactatctataatgttggtccaccatatatatttgggattaaacttaacagtctgg 28562815  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    ||||||||| ||||||||| ||||  ||||||||||||| ||| | |||||||||| || |||||||||||||| ||||||||||||   |||||| ||     
T  28562816 atttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaattatttgagggaccattga 28562915  T
Q  319 atcaaataa 327  Q
    |||||||||    
T  28562916 atcaaataa 28562924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 7437767 - 7437854
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||||| | |||||||| |||| ||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||    
T  7437767 gatttattttgtaaacggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 7437854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 11547787 - 11547660
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||| |||||||||| |||||||||| |||||| || ||||  ||||||   ||||| |  | |||||||||| ||||||||||||||||||||||||    
T  11547787 gttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgtgttttattaattatgagaccaaaatgaaaacttgaaa 11547688  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
    ||||||| |||||||||  |||||||||    
T  11547687 ttatttaaaggaccaataaatcaaataa 11547660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 18616945 - 18617109
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| ||||||| ||||||||||||||||||   |||  |||||| |||| |||   |||||||||||||||||||| ||||  ||||||    
T  18616945 tctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgaggg 18617044  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    || ||||||     ||||||||||||| ||||||||||||||| ||||||||  || ||||||||    
T  18617045 actaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaa 18617109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 29219562 - 29219398
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||  |||||||||||||||||   |||  |||||| ||||||||   |||||||||||||||||||| ||||  ||||||    
T  29219562 tctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgaggg 29219463  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    || ||||||     ||||||||||||| ||||||||||||||| ||||||||  || ||||||||    
T  29219462 actaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaa 29219398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 29332861 - 29332697
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||  |||||||||||||||||   |||  |||||| ||||||||   |||||||||||||||||||| ||||  ||||||    
T  29332861 tctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttatttggcaaacggaggaaaaggtgaggg 29332762  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    || ||||||     ||||||||||||| ||||||||||||||| ||||||||  || ||||||||    
T  29332761 actaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaa 29332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 18615746 - 18615542
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||          |||| ||| |||||| |  |||||||| | |||||||||    
T  18615746 gaagatctaacggtcccttttatgataaatagatcaaacggttaaaattaa---------taaggcctacgatggatcgcttttaaggttcgtccaccat 18615656  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | | |||| || ||||| |||||||||  |||||||||||||||||||| ||||  |  ||||| |||| |     ||||||||||||||||||||||||    
T  18615655 aaatatttaaaattaaaattaacagtcgggatttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatg 18615556  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  18615555 aaaatatgaaatta 18615542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 315
Target Start/End: Complemental strand, 34513008 - 34512827
Alignment:
Q  133 aaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaa 232  Q
    ||||||| |||||||  ||||| |||| ||||||| | ||| || || ||||||||| |||||  | |||||| |||||||||| |||||||||| | ||    
T  34513008 aaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatatacatta-aggttaaacttaacagtcatgatttatttgactaa 34512910  T
Q  233 cggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||  ||| |||||||| |||||| |  | |||||||||| || |||||||||||||||| | ||||| |||| |||||||    
T  34512909 cggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaa 34512827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 315
Target Start/End: Complemental strand, 34464164 - 34463981
Alignment:
Q  133 aaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaa 231  Q
    ||||||| |||| ||  |||||||||| ||||||| | |||||| ||||| || |||||||||||  |||||| |||||||||| |||||||||||   |    
T  34464164 aaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacatttggggttaaacttaacagtcagagatttatttgatta 34464065  T
Q  232 acggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||  |||| ||| |||||||||  |  | |||||||||| | | ||||||||||||||| | ||||| |||| |||||||    
T  34464064 acggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaactggtaattaattaggggaccaa 34463981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 327
Target Start/End: Complemental strand, 36010681 - 36010578
Alignment:
Q  224 tttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaa 323  Q
    ||||||||||| || ||||  |||||||| ||||  |||| ||||||||| || |||||||||||||||| ||||||||||||  |||| ||||||||||    
T  36010681 tttggcaaacgaaggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggactaatggatcaa 36010582  T
Q  324 ataa 327  Q
    ||||    
T  36010581 ataa 36010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 332
Target Start/End: Original strand, 36011647 - 36011761
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    ||||||||||||||||||||  ||||  |||||||| |||||||||  |||||||||| || ||  |||||| |||||| |||||||||| |||| ||||    
T  36011647 agatttatttggcaaacggattaaaaaatgagggactaaaacgtacattttattaattatgggattaaaatg-aaacttaaaattatttaaaggatcaat 36011745  T
Q  317 ggatcaaataatctta 332  Q
    ||||||||||| ||||    
T  36011746 ggatcaaataagctta 36011761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 21664953 - 21664816
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||||  |||| |||| ||||  ||| | || |||||  |   ||||| ||||||    
T  21664953 tggtccaccatagacatttgaagttaaacttaacagtcagaaatttatttaacaaatggaggaaaaaatgaag-actaaaacagaaattttatgaattgt 21664855  T
Q  277 gagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    | |||||||||||||||||||||||| ||| ||||||||    
T  21664854 gtgaccaaaatgaaaacttgaaattaattaaaggaccaa 21664816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 29220762 - 29220966
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||          |||| ||| |||||| |  |||||||| | |||||||||    
T  29220762 gaagatctaacggtcccttttatgataaatagatcaaacggttaaaattaa---------taaggcctacgatggatcgcttttaaggttcgtccaccat 29220852  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | | |||| || ||||| |||||||||  |||| ||||||||||| ||| ||||  | |||||| |||| |     ||||||||||||| ||||||||||    
T  29220853 aaatatttaaaattaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatg 29220952  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  29220953 aaaatatgaaatta 29220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 29334061 - 29334265
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||||          |||| ||| |||||| |  |||||||| | |||||||||    
T  29334061 gaagatctaacggtcccttttatgataaatagatcaaacggttaaaattaa---------taaggcctacgatggatcgcttttaaggttcgtccaccat 29334151  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | | |||| || ||||| |||||||||  |||| ||||||||||| ||| ||||  | |||||| |||| |     ||||||||||||| ||||||||||    
T  29334152 aaatatttaaaattaaaattaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatg 29334251  T
Q  289 aaaacttgaaatta 302  Q
    ||||  ||||||||    
T  29334252 aaaatatgaaatta 29334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 326
Target Start/End: Complemental strand, 7436616 - 7436469
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||| ||||||| |||||||  |||| | ||||| || | |||||||||| ||||||||  |||| |||||| ||||||| |||   ||||||||||||     
T  7436616 tggttcaccatatacatttggggttagacttaactgttaggatttatttgacaaacggaagaaaaattgagg-accaaaaggtatattttattaattgta 7436518  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
     ||||||||| |||||||||||||||||   |||||| |||||||||||    
T  7436517 ggaccaaaataaaaacttgaaattatttgagggaccattggatcaaata 7436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 6030458 - 6030585
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||||||||| ||  ||||||||||||||||  ||| ||||  ||| ||| ||||||||||  || |||||||||| || |||||||||||||| |||    
T  6030458 gttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtgggatcaaaatgaaaacttcaaa 6030557  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
    ||||||   |||| | ||||||||||||    
T  6030558 ttatttgagggactattggatcaaataa 6030585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 6032193 - 6032344
Alignment:
Q  92 gatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccataga 191  Q
    |||||||||||||| ||||| || || ||||| || || |||||||||  || |||  |||||||| |||||| ||  | | | | ||||| ||||||||    
T  6032193 gatctaacggtcccctttatgattaaaagatcaaacggctaaaattaattaaattaataaggtctacgatggatcatgtcttatgttggtcaaccataga 6032292  T
Q  192 catttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaa 242  Q
    |||||||||||||||||||| ||||  |||||||||||||||| ||| ||||    
T  6032293 catttgaagttaaagttaacggtcatggatttatttggcaaacagaggaaaa 6032344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 315
Target Start/End: Complemental strand, 35903651 - 35903521
Alignment:
Q  186 catagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaa 284  Q
    ||||||||||||  |||||| ||||||| |||| ||||||||| |  ||||||| | | ||||||||||||||| |    ||||||| || || ||||||    
T  35903651 catagacatttggggttaaacttaacagccaaggatttatttgactgacggagatataattgagggaccaaaacatgacttttattagttatgggaccaa 35903552  T
Q  285 aatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||||| ||| ||||||||    
T  35903551 aatgaaaacttgaaattaattaaaggaccaa 35903521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 42641867 - 42641975
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||||||||||| ||||| | | |||||||||| || || |||||||||| || ||||||||| |||| ||||||||||||   |||||| ||    
T  42641867 gatttatttggcaaacggaaaaaaagtgg-gggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccattg 42641965  T
Q  318 gatcaaataa 327  Q
     |||||||||    
T  42641966 aatcaaataa 42641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 2277434 - 2277562
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  ||||||||||||   || | ||||||||| |  || |||   |||||||||||||||||| || | ||||||| || |    
T  2277434 tggtccaccatagacatttggggttaaagttaactcccatggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattacttat 2277533  T
Q  277 gagaccaaaatgaaaacttgaaattattt 305  Q
    | |||||||||||||||| ||||||||||    
T  2277534 gggaccaaaatgaaaactggaaattattt 2277562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 32469259 - 32469149
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtac--gatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||| ||||| ||||  ||| ||||||||| ||||  | ||||||||||||| || ||||||||||||||||||||||||   ||||||     
T  32469259 gatttatttggcaa-cggaggaaaaagtgaaggaccaaaaggtacacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccat 32469161  T
Q  316 tggatcaaataa 327  Q
    || |||||||||    
T  32469160 tgaatcaaataa 32469149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 34469069 - 34468984
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||||||||||||||||| ||  ||||  |||||||| |||||||    ||||||||||||| ||||||||||||||| ||||||||    
T  34469069 agatttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaatta 34468984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 6028794 - 6028746
Alignment:
Q  279 gaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  6028794 gaccaaaatgaaaatttgaaattatttaggagaccaatggatcaaataa 6028746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 34147287 - 34147159
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  |||||||||||||  || | ||||||||| |   |||||   |||||||||||||||||| |  | ||||||| || |    
T  34147287 tggtccaccatagacatttggggttaaagttaacacccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattacttat 34147188  T
Q  277 gagaccaaaatgaaaacttgaaattattt 305  Q
    | ||||||||||||||||  |||||||||    
T  34147187 gggaccaaaatgaaaactgaaaattattt 34147159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 306
Target Start/End: Original strand, 12359647 - 12359773
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgag 279  Q
    ||||||||||||| || | ||||||||||||||  | | ||||||||||| |||  || ||||  |||||||||||||||     ||||||||||||| |    
T  12359647 tccaccatagacacttaaggttaaagttaacagctacggatttatttggcgaacaaaggaaaaaatgagggaccaaaacgccaattttattaattgtggg 12359746  T
Q  280 accaaaatgaaaacttgaaattattta 306  Q
    || |||| |||||| ||||||||||||    
T  12359747 actaaaacgaaaacatgaaattattta 12359773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 1085394 - 1085476
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||||||||||||| ||||  |||||||||||||||     |||||||| ||||  |||||||||||||| ||||||||    
T  1085394 gatttatttggcaaacggaggaaaa--tgagggaccaaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaatta 1085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 16295158 - 16295217
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacag 213  Q
    |||||| ||||||| | |||||| |||||||||| | |||||| ||||||||||||||||    
T  16295158 tctatggtggaccactgttaaggttggtccaccaaaaacatttaaagttaaagttaacag 16295217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 34467702 - 34467630
Alignment:
Q  133 aaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa 205  Q
    ||||||| ||| |||  ||||| |||| ||||||| | |||||| | ||||| ||||||||||||||||||||    
T  34467702 aaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacatttgaagttaaa 34467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 7e-62; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 325092 - 325300
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||||||||||||||| |||  |||||||| ||||||||| | |||||| |||||||||||||||||||  |||||||||||||||||  |    
T  325092 agatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacatttagagttaaagttaacagtcggg 325191  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatgg 318  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||   |||||| | |    
T  325192 atttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattag 325291  T
Q  319 atcaaataa 327  Q
    |||||||||    
T  325292 atcaaataa 325300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 39605345 - 39605584
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaatttt-aaggctggtccacca 187  Q
    ||||||||||||||||||||||| ||||||||||| || || ||||||||| ||| |||  ||||||||  || ||||| |||| |||  ||||||||||    
T  39605345 gaagatctaacggtcccttttatgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccactttttaagattggtccacca 39605444  T
Q  188 tagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaat 287  Q
    || |||||| ||||| |||||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||| | ||||||||||||| |||||||||    
T  39605445 tatacatttaaagttgaagttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaat 39605544  T
Q  288 gaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||| ||||||||||| || |||||||||    
T  39605545 gaaaacttgaaattaattagaggaccattgaatcaaataa 39605584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 89 - 327
Target Start/End: Complemental strand, 30858030 - 30857801
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||||||| ||         ||||| |||| ||||| |||||||| ||||||| |||    
T  30858030 gaagatctaatggtcccttttatgataaatagatcgaacggttaaaattaataa---------ggtctctgatagaccacttttaaggttggtccatcat 30857940  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||| |||||||||||||| || |||||||||||| |||| |||| ||||  ||| |||||||||| |||| ||||||||||||| ||||||||||    
T  30857939 agacatttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacatacgttttattaattgtgggaccaaaatg 30857840  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||| |||||| ||||||||||| || |||||||||    
T  30857839 aaaacttaaaattaattagaggaccattgaatcaaataa 30857801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 30912039 - 30912252
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||||||||||  |||||||||||  | | ||| |||||||||| |||  ||||||||||||| |||| |||||||| |||||||||||    
T  30912039 gaagatctaatggtcccttttaagataaatagatcggatgattagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccat 30912138  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||| ||||| |||||||||||||| |   |||||||||||||||||||||||||  |||||||| ||||||     ||||||||||||| ||||||||||    
T  30912139 agatatttggagttaaagttaacacttgggatttatttggcaaacggagaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatg 30912238  T
Q  289 aaaacttgaaatta 302  Q
    ||||| ||||||||    
T  30912239 aaaacatgaaatta 30912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 39604030 - 39603854
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| |||| || |||||||| ||||| |||||||||||   |||  |||||| |||||||||| |||||||||||||||||||| |||| |||||||    
T  39604030 tctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcatgatttatttggcaaacggaggaaaatttgaggg 39603931  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||   ||| |||||||||||||||    
T  39603930 accaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggatcaatggatcaaataa 39603854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 327
Target Start/End: Complemental strand, 22047907 - 22047733
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggac 252  Q
    |||| ||||||| | |||||| || ||||||||||||||   ||  ||||||| ||||||| || |||||||||||||||||||| ||||  ||||||||    
T  22047907 tatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggac 22047808  T
Q  253 caaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  22047807 caaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataa 22047733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 27705256 - 27705409
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||| |||||||||||||||||   ||| | ||||||||||| |||   |||||||||||||| |||| ||||  ||||||    
T  27705256 tctatggtggaccacttttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgaggg 27705354  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  27705355 accaaaacgtacgttttattaattgtatgaccaaaatgaaaacttgaaattattt 27705409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 30859111 - 30859287
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||  |||||||||||||||||   |||  |||||| ||||| ||||||| ||||||||||||| ||| ||||  ||||||    
T  30859111 tctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagacttatttggcaaacagaggaaaatgtgaggg 30859210  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||   |||| |||| |||||||||    
T  30859211 acttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatgaatcaaataa 30859287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 22049111 - 22049251
Alignment:
Q  187 atagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaa 286  Q
    |||||||||||  |||||| |||||||    |||||||||| ||||| ||| ||||  ||||||||||||||||||| |||||||||| || ||||||||    
T  22049111 atagacatttggggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaa 22049210  T
Q  287 tgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||||| |||| ||||| ||||||||    
T  22049211 tgaaaacttgaaattatttaggggactaatggttcaaataa 22049251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 135 - 315
Target Start/End: Original strand, 22308721 - 22308902
Alignment:
Q  135 attaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaac 233  Q
    ||||| |||||||  || ||||||| ||||||| | ||||||  |||||||||||||||||||  |||||| ||||||  || | |||||||||||||||    
T  22308721 attaaaaaatttaataatgtctatggtggaccactcttaaggtaggtccaccatagacatttggggttaaacttaacaaccatggatttatttggcaaac 22308820  T
Q  234 ggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||| ||||  |||||||| ||||||   | |||||||||| || ||||||||||||||| ||||||||||||| |||||||    
T  22308821 ggagcaaaatgtgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaa 22308902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 8521429 - 8521268
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| ||||||| | |||||| |||||||||||| |||||||  |||||||||||| |||  |||||||||| |  ||||||| |||| |||||||||    
T  8521429 tctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggacc 8521330  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||| |  | ||||||| || || |||||||||||||||||||||||| |||  |||||||    
T  8521329 aaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaa 8521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 162 - 315
Target Start/End: Original strand, 1010314 - 1010467
Alignment:
Q  162 ggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgta 261  Q
    |||||| | |||||| |||||||||||| |||||||  |||||||||||| |||  |||||||||| |  ||||||| |||| |||||||||||||| |     
T  1010314 ggaccactcttaaggttggtccaccatacacatttggggttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatg 1010413  T
Q  262 cgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
     | ||||||| || || ||||||||| |||||||||||||| |||  |||||||    
T  1010414 agttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaa 1010467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 30910918 - 30910767
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| |||||||||| ||||||   |||  |||||||||||||||| |||||||||||| |||| ||| ||||  ||||||    
T  30910918 tctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgaggg 30910819  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    || ||||||     ||||||||||||| ||||||||||||||| ||||||||    
T  30910818 actaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 30910767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 11263576 - 11263811
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaagg-ttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccacca 187  Q
    |||||||||||||||| |||||| |||| || || |||||| |||||||||||||| |||  ||||| ||||||||| || |||||||  |||| ||  |    
T  11263576 gaagatctaacggtcc-ttttatgataacta-at-taaaggattaaaattaacaaaattaataaggtttatgatggatcatttttaagtttggttcatta 11263672  T
Q  188 tagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaat 287  Q
    |||||||||||||||||| ||||| ||||  |||||||||  |||||||||||||  ||| | || ||||  |||| |||||| ||| |  |||||||||    
T  11263673 tagacatttgaagttaaa-ttaactgtcacaatttatttgataaacggagaaaaatatgaagaactaaaaaatacgttttattgattataggaccaaaat 11263771  T
Q  288 gaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     |||| || ||||||||||||| | ||||  |||||||||    
T  11263772 aaaaatttaaaattatttagagaatcaataaatcaaataa 11263811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 302
Target Start/End: Original strand, 33173865 - 33174050
Alignment:
Q  119 agatctaaaggttaaaatt--aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca 216  Q
    ||||| || ||||||||||  || ||||| |||||| |||||| | ||||| | |||||| ||||||||||||||||||||  |||||| ||||||| ||    
T  33173865 agatcaaacggttaaaatttaaaaaaattaatgaag-tctatggtagaccactcttaaggttggtccaccatagacatttggggttaaacttaacagcca 33173963  T
Q  217 a-gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    | |||||||||||||||| ||| ||||  |||||||| ||||||     |||||||| |||| || |||||||||||| ||||||||    
T  33173964 aggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaatta 33174050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 8523734 - 8523849
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||||||||| |||| |||||||||| |  ||||||| |||| ||| ||| |||||| |  | ||||||| || || |||||||||||||||||||||    
T  8523734 gttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaa 8523833  T
Q  300 ttatttagaggaccaa 315  Q
    ||| |||| |||||||    
T  8523834 ttaattaggggaccaa 8523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 32757976 - 32757848
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  |||||||||||||  || | ||||||||| |   |||||   |||||||||||||||||| |  | ||||||| || |    
T  32757976 tggtccaccatagacatttggggttaaagttaacacccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattatttat 32757877  T
Q  277 gagaccaaaatgaaaacttgaaattattt 305  Q
    | |||||||||||||||| ||||||||||    
T  32757876 gggaccaaaatgaaaactggaaattattt 32757848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 11262319 - 11262257
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||| | |||||||||| ||||||    
T  11262319 tttattaattgtgggactaaaatgaaaacttaaaattatttagggaaccaatggataaaataa 11262257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 41798004 - 41798062
Alignment:
Q  269 ttaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||| ||||||||| |||||||||||||||||   |||||||||||||||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataa 41798062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 34894259 - 34894150
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||| ||||||||||||||| |||  | ||||||||||| ||||  ||||||| ||  | |||||||||||||| | ||||||| |||  |||||||||    
T  34894259 gatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaatg 34894160  T
Q  318 gatcaaataa 327  Q
    |||| |||||    
T  34894159 gatctaataa 34894150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 15548365 - 15548241
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaa 299  Q
    |||||| ||||||| || |||||||||||||||||||| |||| | ||||||| |||  ||    |||||||||| || ||  ||||  |||| ||||||    
T  15548365 gttaaacttaacaggcaggatttatttggcaaacggaggaaaaat-gagggactaaatagtgaattttattaattatgggataaaaa--aaaatttgaaa 15548269  T
Q  300 ttatttagaggaccaatggatcaaataa 327  Q
    |||||||| |||||||||||||||||||    
T  15548268 ttatttaggggaccaatggatcaaataa 15548241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 24503294 - 24503191
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||| |||||||||| |||| |||  | ||||||||||| ||||| ||||||| || || |||||||||||||| | | ||||| |||  |||||||||    
T  24503294 gatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccaatg 24503195  T
Q  318 gatc 321  Q
    ||||    
T  24503194 gatc 24503191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 34898963 - 34899066
Alignment:
Q  224 tttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaa 323  Q
    ||||||||||||||| |||  | ||||||||||| ||||  ||||||| || || |||||||||||||| |  |||||| |||  ||||||||||||| |    
T  34898963 tttggcaaacggagacaaaactaagggaccaaaatgtactttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaatggatcta 34899062  T
Q  324 ataa 327  Q
    ||||    
T  34899063 ataa 34899066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 1102793 - 1102731
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca 216  Q
    |||||| ||||||| | |||||| ||||| ||||||||||||||  |||||||||||||||||    
T  1102793 tctatggtggaccactcttaaggttggtctaccatagacatttggggttaaagttaacagtca 1102731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 15941380 - 15941275
Alignment:
Q  221 ttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggat 320  Q
    ||||||| ||||||||  ||||  ||||||||||||  ||||| |||||||||| ||  | |||||||||||||| |||||||| | ||||||  |||||    
T  15941380 ttatttgacaaacggaagaaaaagtgagggaccaaatggtacgttttattaattatggaatcaaaatgaaaacttaaaattattga-aggaccgttggat 15941282  T
Q  321 caaataa 327  Q
    |||||||    
T  15941281 caaataa 15941275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 324218 - 324153
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagtt-aaagttaacagt 214  Q
    |||||||||||||||||| | |||| | |||||||||||||||||||  |||| ||||||||||||    
T  324218 aaggtctatgatggaccactattaaagttggtccaccatagacatttagagttaaaagttaacagt 324153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 22307618 - 22307521
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||| ||| ||||  |||||||| |||||    | |||||||||| ||  |||||||||||||| ||||||| ||||| |||||||    
T  22307618 gatttatttggcaaacagagcaaaaagtgagggactaaaacacctgttttattaattatggaaccaaaatgaaaacatgaaattgtttaggggaccaa 22307521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 35081355 - 35081435
Alignment:
Q  131 taaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    ||||||||| ||| |||| ||||| |||| ||||| | | |||||| || ||||| |||||||||||| ||||||||||||    
T  35081355 taaaattaaaaaaattattaaggtttatggtggacaactcttaaggttgatccactatagacatttgaggttaaagttaac 35081435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 26047897 - 26047826
Alignment:
Q  244 ttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    ||||||||| ||||| |  | ||||||| || |||||||||||| |||| ||||||||| ||||||||||||    
T  26047897 ttgagggactaaaacatgagttttattagttatgagaccaaaataaaaatttgaaattaattagaggaccaa 26047826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 307
Target Start/End: Complemental strand, 1009360 - 1009205
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacattt---gaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||| |||||||||||| ||||||   |  || |||||||||  |||||||||||||| |  | ||||| |||| ||| |     
T  1009360 tctatggtggaccactcttaaggttggtccaccata-acattttggggggtaaaagttaactatcaagatttatttgactgatggagacaaacatgaaga 1009262  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttag 307  Q
    |||||||| |  | ||||||| || ||  ||||||||||||||||||||||| ||||    
T  1009261 accaaaacatgagttttattagttatggaaccaaaatgaaaacttgaaattaattag 1009205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9220425 - 9220459
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaaca 212  Q
    ||||||||||||||||||||| |||||||||||||    
T  9220425 tggtccaccatagacatttgaggttaaagttaaca 9220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 20538116 - 20538066
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||| || |||||||||||||| ||||||||| |||| |||||||    
T  20538116 tttattaattatgggaccaaaatgaaaatttgaaattaattaggggaccaa 20538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 24509042 - 24509116
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| |||||||||| |||| |||  | ||||||||||| ||||| ||||||| || || ||||||||||||||    
T  24509042 gatttttttggcaaacagagagaaaactaagggaccaaaaggtacgttttattacttatgggaccaaaatgaaaa 24509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 116; Significance: 7e-59; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 89 - 324
Target Start/End: Complemental strand, 52831 - 52596
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||  |||||||| | ||||||||||| || || ||||||||| ||| |||  ||||||||  || ||||| |||||||| |||||||||||    
T  52831 gaagatctaacaatcccttttgtgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccatttttaaggttggtccaccat 52732  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | |||||| |||||||||||||| |||  |||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||| || |||||||    
T  52731 atacatttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttattaattgtgggatcaaaatg 52632  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaa 324  Q
    |||||||||||||| ||||||||||| || ||||||    
T  52631 aaaacttgaaattaattagaggaccattgaatcaaa 52596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 154 - 327
Target Start/End: Original strand, 54124 - 54300
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| |||||||| |||||||||||||||||   |||  |||| | |||||||||| |||||||||||||||||||| |||| |||||||    
T  54124 tctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgatttatttggcaaacggaggaaaatttgaggg 54223  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||   |||||||||||||||||||    
T  54224 accaaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggaccaatggatcaaataa 54300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 327
Target Start/End: Original strand, 109622 - 109860
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||| | |||||| ||||||||||| || |||||||||||||||| |||  |||||||| ||||||| | |||||||| |||||||||||    
T  109622 gaagatctaacggttcattttatgataaatagatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccat 109721  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | |||||||||||||||||||| |||   |||| ||||||||||  ||||||||  |||||||| |||| ||||| ||||||||||||  ||||||||||    
T  109722 atacatttgaagttaaagttaatagttgggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaattgtaggaccaaaatg 109821  T
Q  289 aaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||||||||  |||||| || |||||||||    
T  109822 aaaacttgaaattatttaagggaccattgaatcaaataa 109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 108689 - 108514
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagac--atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| |||||||| ||||||||||||     |||||  |||||| ||||| |  | ||||||||||||||| |||| ||||  |||||||    
T  108689 tctatggtggaccacttttaaggttggtccaccataatattatttggggttaaacttaactgcaaggatttatttggcaaatggaggaaaaaatgaggga 108590  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     ||||||||||| |||||||||| || || ||||||| ||| | ||||||| |||| | ||||||| || ||||||    
T  108589 tcaaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaattagggaaccaatgaattaaataa 108514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 89 - 315
Target Start/End: Complemental strand, 16964073 - 16963847
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||||||||||| |||  |||||||||||||||||| |||||||| ||||||| |||    
T  16964073 gaagatctaatggtcccttttatgataaatagatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcat 16963974  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | ||||||  ||||||||||||||||||  ||||||||||||||||||| ||||  |||||||| |||||      ||||||||||||| ||||||||||    
T  16963973 aaacatttagagttaaagttaacagtcagcatttatttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatg 16963874  T
Q  289 aaaacttgaaattatttagaggaccaa 315  Q
    ||||| |||||||| ||| | ||||||    
T  16963873 aaaacatgaaattaattaaaagaccaa 16963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 161 - 336
Target Start/End: Original strand, 15072738 - 15072914
Alignment:
Q  161 tggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacg 259  Q
    ||||||| | || ||| ||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||| ||||  | ||||||||||| |    
T  15072738 tggaccactctttaggttggtccaccatagacatttgaggttaaagttaacagacatggatttatttggcaaacggaggaaaaaataagggaccaaaatg 15072837  T
Q  260 tacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||||| | ||||||    
T  15072838 tacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccattgaatcaaataagcctatttt 15072914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 273
Target Start/End: Complemental strand, 46110491 - 46110337
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||||||||||||||| |||  |||||||| ||||||||| | |||||| |||||||||||||| ||||  ||||||||||||||||| ||    
T  46110491 agatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatatttagagttaaagttaacagtcgag 46110392  T
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaat 273  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||    
T  46110391 atttatttagcaaacggagaaaaacttgagtgaccaaaaagtacgttttattaat 46110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 153 - 327
Target Start/End: Complemental strand, 23091528 - 23091352
Alignment:
Q  153 gtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag--atttatttggcaaacggagaaaaacttgaggg 250  Q
    ||||||| ||||||| |||||| | |||||||||||||||||||||  ||||| ||||||| | ||  ||||||||||||||||||||||||  |||| |    
T  23091528 gtctatggtggaccacttttaaagttggtccaccatagacatttgagattaaacttaacagactagggatttatttggcaaacggagaaaaaagtgagtg 23091429  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||||||| |||||||||||| | |||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  23091428 accaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaatagatcaaataa 23091352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 27814493 - 27814315
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaa-gttaacagtcaagatttattt 226  Q
    |||||||||||||||| |||  ||||| || ||||||||| |||||| | |||||||||||||||||||  ||||||| |||||| |||  |||||||||    
T  27814493 ggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacatttagagttaaaagttaaccgtcgggatttattt 27814394  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||||||| ||| ||||  ||||||||||||| ||||| |||||||||| |  ||| |||||||||||||||||||||||    
T  27814393 ggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaattattt 27814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 15233919 - 15234131
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||| ||| |||||||||||| ||||||||||| || ||||||||||||||||  ||  | |||||| ||||||||| | | |||  ||||| |  ||    
T  15233919 gaagatataatggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattat 15234018  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||| ||||  |||||||| ||||||     ||||||||||||| ||||||||||    
T  15234019 agacatttgaagttaaag-taacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatg 15234117  T
Q  289 aaaacttgaaatta 302  Q
    ||||| ||||||||    
T  15234118 aaaacatgaaatta 15234131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 315
Target Start/End: Original strand, 24499621 - 24499758
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    |||||||| ||||||||||||  |||||||| |||| |  ||||||||||| |||||||| ||||  ||||||||||||||||  | |||||||||||||    
T  24499621 tggtccacaatagacatttgagtttaaagttgacagaccggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtg 24499720  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24499721 agaccaaaatgaaaacttgaaattatttaggggaccaa 24499758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 49802777 - 49802985
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagac 192  Q
    ||||||| ||||||||||| |||| |||||| ||  ||| |||| |||||| |||   ||||||| ||| ||||| |||||||| |||| ||||||||||    
T  49802777 atctaacagtcccttttat-ataagtagatcgaatagttgaaataaacaaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagac 49802875  T
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||  |||| |||||||| |||  |||||||||||||||||||||||||  |||||||| |||||||    ||||||||||||| ||||||||||||||    
T  49802876 atttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaa 49802975  T
Q  293 cttgaaatta 302  Q
    | ||||||||    
T  49802976 catgaaatta 49802985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 327
Target Start/End: Complemental strand, 14471029 - 14470857
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggacca 254  Q
    |||| ||||||| | |||||| |||||||| |||||| ||||  |||||| ||||||   ||| |||||||||||||||| || ||||  ||||||||      
T  14471029 tatggtggaccactcttaaggttggtccactatagacgtttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgagggactt 14470930  T
Q  255 aaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    || |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  14470929 aaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattggatcaaataa 14470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 45584998 - 45585124
Alignment:
Q  201 ttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaat 300  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||  ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  45584998 ttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaat 45585097  T
Q  301 tatttagaggaccaatggatcaaataa 327  Q
    |||||   |||| | ||||||||||||    
T  45585098 tatttgagggactattggatcaaataa 45585124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 15071452 - 15071343
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    ||||||||||| |||||||| ||||  |||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  15071452 gatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaatg 15071353  T
Q  318 gatcaaataa 327  Q
    ||| ||||||    
T  15071352 gattaaataa 15071343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 50444605 - 50444813
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacattt-gaagttaaagttaacagtcaa 217  Q
    ||||| || ||||||||| |||||| |||  |||||||| ||||||| | | |||||| ||||||| ||||||| ||| | ||||||||||||| ||       
T  50444605 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaacatagacgttttggagttaaagttaacggtttg 50444703  T
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||| ||||| ||||  ||||||||||||| ||||| ||||||||||||| ||| |||||||||| ||||||||||||   |||||| ||    
T  50444704 gatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 50444803  T
Q  318 gatcaaataa 327  Q
     |||||||||    
T  50444804 aatcaaataa 50444813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 52628839 - 52628988
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    ||||||||| || | |||||  |||||| ||||| ||  ||||||||||||||||||||| ||||  ||||||||||||| ||||| |||||||||||||    
T  52628839 tggtccaccttacatatttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 52628938  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
     ||||||||| ||||||||||||||||||  ||||| || ||||||||||    
T  52628939 ggaccaaaattaaaacttgaaattatttaagggaccgatagatcaaataa 52628988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 128 - 327
Target Start/End: Original strand, 14477706 - 14477906
Alignment:
Q  128 ggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatt 225  Q
    |||||||||| || ||||| |||||| |||||| ||||| | | |||||  || || |||||||||||||  ||||||| ||||||   ||| |||||||    
T  14477706 ggttaaaatttaaaaaattaatgaag-tctatggtggacaactcttaagattgatctaccatagacatttagagttaaacttaacatcgaaggatttatt 14477804  T
Q  226 tggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 325  Q
    |||||||||||||||||  ||||||||  ||||||||| ||||||||||||| || |||| ||||||||| ||||||||||  |||||| ||||||||||    
T  14477805 tggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattatttatgggaccattggatcaaat 14477904  T
Q  326 aa 327  Q
    ||    
T  14477905 aa 14477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 326
Target Start/End: Complemental strand, 44276272 - 44276124
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    ||||||||||||  ||||||  |||||| |||||||||| |||||| ||| ||||| ||||||||  ||| ||| ||||||||||| |||||||||| ||    
T  44276272 tggtccaccatacgcatttgtggttaaacttaacagtcaggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatg 44276173  T
Q  278 agaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
    ||||||||||||||| | ||||||| |||| | |||||||||| |||||    
T  44276172 agaccaaaatgaaaaatggaaattaattagggaaccaatggattaaata 44276124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 327
Target Start/End: Original strand, 46111479 - 46111603
Alignment:
Q  203 aaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||||||  ||||||||||||||||| || ||||  ||||| ||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  46111479 aaagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaatta 46111578  T
Q  303 tttagaggaccaatggatcaaataa 327  Q
    ||||  |||||| || |||||||||    
T  46111579 tttaagggaccattgaatcaaataa 46111603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 150 - 327
Target Start/End: Complemental strand, 16123466 - 16123288
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgag 248  Q
    ||||| |||| |||| || |||||| | ||||| |||||||||||||||  ||||| ||||||  || | ||||||||||||||||||  ||||  ||||    
T  16123466 aaggtatatggtggatcacttttaaagttggtctaccatagacatttgagattaaacttaacaaccagggatttatttggcaaacggaagaaaaaatgag 16123367  T
Q  249 ggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||| |||||||    |||||||||||||  |||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  16123366 ggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagaggatcaatgaatcaaataa 16123288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 44278359 - 44278444
Alignment:
Q  222 tatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttag 307  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||    
T  44278359 tatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaattaattag 44278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 141 - 306
Target Start/End: Original strand, 35943375 - 35943541
Alignment:
Q  141 aaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag--atttatttggcaaacggaga 238  Q
    |||||||  |||||||||| |||| || | |||||| |||||||||||||||||||   |||||| ||||||| || |  |||||||||||||||| ||     
T  35943375 aaatttaataaggtctatggtggatcactcttaaggttggtccaccatagacatttagggttaaacttaacagccaggggatttatttggcaaacgaagg 35943474  T
Q  239 aaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattta 306  Q
    ||||  ||||| ||||||| ||||| ||||||||||||| ||||||||| |||| |||||||||||||    
T  35943475 aaaaagtgagg-accaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaattattta 35943541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 327
Target Start/End: Original strand, 41873877 - 41874086
Alignment:
Q  119 agatctaaaggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    ||||| || |||||||||| || ||||| |||||| |||||| ||||||| | |||||| ||||||||||||||||||||  |||||| ||||||  |||    
T  41873877 agatcaaacggttaaaatttaaaaaattaatgaag-tctatggtggaccactcttaaggttggtccaccatagacatttgtggttaaacttaacaaccaa 41873975  T
Q  218 -gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
     ||||||||||| |||||||| ||||  | | || ||||||  |||  |||||||||| ||||||||| ||||||| | ||||||| ||   ||||||||    
T  41873976 ggatttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaat 41874075  T
Q  317 ggatcaaataa 327  Q
    ||||| |||||    
T  41874076 ggatctaataa 41874086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 115 - 315
Target Start/End: Original strand, 15746669 - 15746869
Alignment:
Q  115 aaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagt 214  Q
    ||||||||| || |||||||||||| | ||| || | | |||||| ||||||| | |||||  |||||||||||||||||||||||||||| ||||||||    
T  15746669 aaatagatcaaagggttaaaattaaaagattaat-aggatctatggtggaccactcttaagattggtccaccatagacatttgaagttaaacttaacagt 15746767  T
Q  215 -caagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggacc 313  Q
      | |||||||||| |  ||||||| | | || |||||||||||| |  | ||||||| || || |||||||||||||| | ||||||| |||| |||||    
T  15746768 ggatgatttatttgactgacggagatacaattaagggaccaaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggacc 15746867  T
Q  314 aa 315  Q
    ||    
T  15746868 aa 15746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 327
Target Start/End: Complemental strand, 41872777 - 41872577
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaag-ttaaagttaacagtcaagatttattt 226  Q
    |||| ||||||| |||||||  |||||||||| || || ||| |||||  |||| |||||||||||||||  | ||||| ||||||   | |||||||||    
T  41872777 ggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatttgggggttaaacttaacaccaatgatttattt 41872678  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaata 326  Q
    ||||||||||| ||||  |||| |||  ||||||||| ||||||||||||  || ||||||||||| ||||||||| | |  |||||| | |||||||||    
T  41872677 ggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccattagatcaaata 41872578  T
Q  327 a 327  Q
    |    
T  41872577 a 41872577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 50442753 - 50442647
Alignment:
Q  200 gttaaagttaacagtcaa-gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaa 298  Q
    |||||||||||||||||| |||||||||| ||||| ||| ||||  ||||| | ||||| ||||| ||||||||||||||||||||||| ||||| | ||    
T  50442753 gttaaagttaacagtcaaagatttatttgacaaacagaggaaaaggtgaggaatcaaaatgtacgttttattaattgtgagaccaaaataaaaacataaa 50442654  T
Q  299 attattt 305  Q
    |||||||    
T  50442653 attattt 50442647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 315
Target Start/End: Original strand, 51042310 - 51042445
Alignment:
Q  180 gtccaccatagacatttgaagttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtga 278  Q
    ||||| ||||||||||||| |||| | ||||| |||| || |||||||||||||||||||||||   ||||||| |||||||  | |||||||||||||     
T  51042310 gtccatcatagacatttgaggttatacttaacggtcatgaatttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgg 51042408  T
Q  279 gaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||| | ||||||| |||  |||||||    
T  51042409 gaccaaaatgaaaattggaaattaattaagggaccaa 51042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 34351968 - 34352071
Alignment:
Q  224 tttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaa 323  Q
    |||| |||||| || ||||  ||||||||||||| ||||  ||||||||||||| ||||||||||||||||| ||||||||||  |||| | ||||||||    
T  34351968 tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaa 34352067  T
Q  324 ataa 327  Q
    ||||    
T  34352068 ataa 34352071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 52627625 - 52627516
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgattt-attaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||| |||||||||||||| |||| || | || |||||| ||| | ||| |||||||||| |||||||||||||||||||||||||||   |||||| ||    
T  52627625 atttttttggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 52627526  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  52627525 gatcaaataa 52627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 46467306 - 46467158
Alignment:
Q  169 ttttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgattt 267  Q
    |||||| | |||||||||||||||||||   |||||| |||||||  | | ||||||||| |||||||||  |||| ||||||||| |||| |  | |||    
T  46467306 ttttaatgttggtccaccatagacatttatggttaaacttaacagcgagggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagtttt 46467207  T
Q  268 attaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||| || || |||||||||||||||||||||||| ||| |||| ||||    
T  46467206 attagttatgggaccaaaatgaaaacttgaaattaattaaaggatcaat 46467158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 15232928 - 15232778
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat--ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||||||||||| |||||| | |||||||| ||| ||||  ||   |||||| ||||| |||| |||||||||||||||| ||| ||||  |||||||    
T  15232928 tctatgatggaccacttttaaagttggtccactatatacatcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgaggga 15232829  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    | ||||||     |||||||||| || ||||||||||||||| ||||||||    
T  15232828 ctaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaatta 15232778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 312
Target Start/End: Original strand, 48096973 - 48097131
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| | ||||| | |||||| |||||||||||| |||||||| |||||| ||||||||   |||||||||| |  ||||||| |||| | ||||||     
T  48096973 tctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacctaagggact 48097072  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggac 312  Q
    ||||| |  | ||||||| || || ||||||||| |||| | ||||||| |||||||||    
T  48097073 aaaacatgagttttattagttatgggaccaaaataaaaattggaaattaattagaggac 48097131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 294
Target Start/End: Original strand, 30535585 - 30535751
Alignment:
Q  128 ggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacag-tcaagatttattt 226  Q
    |||||||||||| ||||  || |||||||||| ||||| |  | ||| | ||||||||||||||||||||||| ||||||||| || |   |||||||||    
T  30535585 ggttaaaattaaaaaataaat-aaggtctatggtggactatctataatgttggtccaccatagacatttgaagctaaagttaatagatgtggatttattt 30535683  T
Q  227 ggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaact 294  Q
    | |||||||||  | | |||||| || |||||||  | |||||||||| ||  |||||||||||||||    
T  30535684 gacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaact 30535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 315
Target Start/End: Original strand, 46318585 - 46318720
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgag 279  Q
    |||| ||||||||||||  |||||| ||||||| |||| ||||||||| || ||||||| | | ||||||||||||||| |    ||||||| || || |    
T  46318585 tccatcatagacatttggggttaaacttaacagccaaggatttatttgacagacggagatacaattgagggaccaaaacatgacttttattagttatggg 46318684  T
Q  280 accaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    || ||||| |||||||||||||| ||| ||||||||    
T  46318685 acaaaaatcaaaacttgaaattaattaaaggaccaa 46318720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 35942286 - 35942238
Alignment:
Q  279 gaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  35942286 gaccaaaataaaaatttgaaattatttagaggaccaatgaatcaaataa 35942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 49801752 - 49801653
Alignment:
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
    ||||||| |||||| |||||||||  |||||||||||||||| |||| |||| ||||||| ||||||      ||||||||||||| |||||||||||||    
T  49801752 catttgaggttaaaattaacagtcg-gatttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaa 49801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 33369248 - 33369310
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||||||| || |||||||||||| ||||||||||| ||||  ||||| ||||||||||||    
T  33369248 tttattaattatgggaccaaaatgaatacttgaaattaattaggagaccattggatcaaataa 33369310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 3617445 - 3617502
Alignment:
Q  161 tggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||||| | |||||| |||| |||||||||||||||| |||||||||||||| ||||    
T  3617445 tggaccactcttaaggttggttcaccatagacatttgaggttaaagttaacagccaag 3617502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 9226156 - 9226213
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    |||||| ||||||| |||||||| || |||||||||||||||||| |||||| |||||    
T  9226156 tctatggtggaccacttttaaggttgatccaccatagacatttgaggttaaatttaac 9226213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 315
Target Start/End: Original strand, 18821697 - 18821842
Alignment:
Q  171 ttaaggctggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttat 269  Q
    |||||| | ||||||||||||||||||||||||||| |||| || |  |||  ||||||| ||||| | |||  |||||||||| ||||||    ||||     
T  18821697 ttaaggttagtccaccatagacatttgaagttaaagataacggttatggatcaatttggctaacggtgcaaacgttgagggaccgaaacgttgattttac 18821796  T
Q  270 taattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
     | |||||||| |||||||||||||  || ||| ||||||||||||    
T  18821797 gagttgtgagatcaaaatgaaaactgaaagttaattagaggaccaa 18821842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 836246 - 836306
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaat 325  Q
    ||||||| || |||||||||||||||||||  |||||| ||||||||||||| || |||||    
T  836246 tttattagttatgagaccaaaatgaaaactgaaaattaattagaggaccaatagaccaaat 836306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 835308 - 835249
Alignment:
Q  265 tttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaa 324  Q
    ||||||| || |||||||||||||||||||  |||||| |||| ||||||||||| ||||    
T  835308 tttattagttatgagaccaaaatgaaaactgcaaattaattaggggaccaatggaccaaa 835249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 16757461 - 16757524
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacag 213  Q
    |||||||||||||||||| || ||| | ||||||| | ||||||||||  ||||||||||||||    
T  16757461 aaggtctatgatggaccacttataatgttggtccatcttagacatttgtggttaaagttaacag 16757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 42244727 - 42244644
Alignment:
Q  232 acggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||  ||||| |||||||||||| |  | |||||||||| || || ||||||||||| ||||||||| ||| ||||||||    
T  42244727 acggagatcaacttaagggaccaaaacatgagttttattaattatgggatcaaaatgaaaatttgaaattaattaaaggaccaa 42244644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 10376574 - 10376695
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    ||||| |||||| ||||||| ||||||| |||  || |||||||| |||| || || |||  ||| || | |||||||||| || | |||||||||| ||    
T  10376574 tggtctaccatatacatttgcagttaaacttagaagacaagatttttttgacagacagagggaaaatttatggaccaaaacataagttttattaattatg 10376673  T
Q  278 agaccaaaatgaaaacttgaaat 300  Q
    ||| |||| ||||||||||||||    
T  10376674 agatcaaa-tgaaaacttgaaat 10376695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 10722284 - 10722374
Alignment:
Q  121 atctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    ||||||||||| ||||||| ||| |||  |   |||||||||||||| | || ||| ||||||| |||||| |||||| ||||||||||||    
T  10722284 atctaaaggtttaaattaaaaaaattagtagaatctatgatggaccactctttaggttggtccatcatagatatttgaggttaaagttaac 10722374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 22766735 - 22766777
Alignment:
Q  125 aaaggttaaaattaacaaatttatgaaggtctatgatggacca 167  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||    
T  22766735 aaaggttaaaattaaaaaatttatgaaggtccatggtggacca 22766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 48527709 - 48527651
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaaca 212  Q
    |||||| ||||||| | |||| | ||||| |||||||||||||| ||||||||||||||    
T  48527709 tctatggtggaccactcttaaagttggtcgaccatagacatttggagttaaagttaaca 48527651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 836176 - 836205
Alignment:
Q  181 tccaccatagacatttgaagttaaagttaa 210  Q
    ||||||||||||||||||||||||||||||    
T  836176 tccaccatagacatttgaagttaaagttaa 836205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 15743418 - 15743289
Alignment:
Q  187 atagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||||||||||| ||||| |  ||| ||||||||| |  | ||||| | | |  |||||||||||| |  | ||||||| || ||||||||||    
T  15743418 atagacatttgaagttaaacttaacggggaaggatttatttgactgatggagatacaatcaagggaccaaaacatgagttttattacttatgagaccaaa 15743319  T
Q  286 atgaaaacttgaaattatttagaggaccaa 315  Q
    || |||| | ||||||| ||||||||||||    
T  15743318 ataaaaattggaaattaattagaggaccaa 15743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 44999427 - 44999492
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacag-tcaagatttatttggcaaacggagaaaaa 242  Q
    ||||||||||||||||||| | |||||||||||||| |   |||||||||||||||| ||| ||||    
T  44999427 tggtccaccatagacatttaaggttaaagttaacagctagggatttatttggcaaacagaggaaaa 44999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 12666000 - 12665909
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    ||||| || |||| ||||||||||| |||  ||| |||||| ||||||| | |||||  |||| ||||||| |||||||| ||||||||||||    
T  12666000 agatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaaga-tggttcaccataaacatttgaggttaaagttaac 12665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 7310445 - 7310268
Alignment:
Q  159 gatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaac 258  Q
    ||||||||| |||||||| |||| ||||||||||||||| ||||||| ||||||| | |||||||||||| |||||||||||||| ||| ||||  ||||    
T  7310445 gatggaccatttttaaggttggttcaccatagacatttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaac 7310346  T
Q  259 gtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
     |||| |||||||||| || ||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||||    
T  7310345 atacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataagctaatttt 7310268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 302
Target Start/End: Original strand, 23397231 - 23397444
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    |||||||||||||||| |||||| |||||||||||  | |||||||||||||||| |||  ||||| || | ||||| | |||||||| |||||||||||    
T  23397231 gaagatctaacggtccattttatgataaatagatcggatggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccat 23397330  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||||| ||||  |||||||| ||||||     ||||||||||||| ||||||||||    
T  23397331 agacatttgaagttaaatttaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatg 23397430  T
Q  289 aaaacttgaaatta 302  Q
    |||||  |||||||    
T  23397431 aaaacacgaaatta 23397444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 302
Target Start/End: Complemental strand, 29380430 - 29380217
Alignment:
Q  89 gaagatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat 188  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||| |||  |||||||| ||||||| | |||||||| || ||||||||    
T  29380430 gaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccat 29380331  T
Q  189 agacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatg 288  Q
    | ||||||||||||||| ||||| |||  |||||||||||||||||||  ||||  |||||||| ||||||     ||| ||||||||| ||||||||||    
T  29380330 atacatttgaagttaaaattaacggtcgggatttatttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatg 29380231  T
Q  289 aaaacttgaaatta 302  Q
    |||||  |||||||    
T  29380230 aaaacaagaaatta 29380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 92 - 302
Target Start/End: Original strand, 17839019 - 17839229
Alignment:
Q  92 gatctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccataga 191  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||| |||  ||||||||  |||||| | |||||||| |  ||||||||  |    
T  17839019 gatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatcta 17839118  T
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
    |||||||||||||| ||||| |||  |||||||||||||||||||| ||||  |||||||| ||||||     ||||||||||||| |||||||||||||    
T  17839119 catttgaagttaaaattaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 17839218  T
Q  292 acttgaaatta 302  Q
    ||  |||||||    
T  17839219 acaagaaatta 17839229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 6452517 - 6452626
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  6452517 gatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaatg 6452616  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  6452617 gatcaaataa 6452626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 12669898 - 12669736
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggac 252  Q
    |||||| ||||||| | |||||| |||||||||||| |||||||| ||||||||||||||| | |||||||||| |||||||||| ||||  ||| ||||    
T  12669898 tctatggtggaccactcttaaggttggtccaccatacacatttgaggttaaagttaacagttagagatttatttagcaaacggaggaaaaagtgacggac 12669799  T
Q  253 caaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
     ||||| |  | ||||||||||||||||||||||| |||| || | ||||||||||| |||||    
T  12669798 taaaacttgagttttattaattgtgagaccaaaataaaaatttaatattatttagagtaccaa 12669736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 150 - 302
Target Start/End: Complemental strand, 5186745 - 5186594
Alignment:
Q  150 aaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagg 249  Q
    |||||||| ||| ||||| |||||||| | || ||||||||| ||||||||||||||||||| |||  |||||||||||||||||||| ||||  ||| |    
T  5186745 aaggtctacgattgacca-ttttaaggtttgttcaccatagatatttgaagttaaagttaacggtcgggatttatttggcaaacggaggaaaagatgatg 5186647  T
Q  250 gaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||  |||||||    ||||||||||||| ||||||||||||||| ||||||||    
T  5186646 gattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaatta 5186594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 327
Target Start/End: Complemental strand, 6452399 - 6452285
Alignment:
Q  213 gtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggac 312  Q
    |||| |||||||||||||||||||| ||||  |||||||| |||||||||  |||||||||| |  |||||||| |||||||||||||||||||| ||||    
T  6452399 gtcaggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattatttaggggac 6452300  T
Q  313 caatggatcaaataa 327  Q
    | |||||| ||||||    
T  6452299 cgatggattaaataa 6452285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 232316 - 232183
Alignment:
Q  187 atagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  ||||||||||||||||   | ||||||||||||||||||| ||||  |||||||| |||||||  | |||||||||| || |||||||    
T  232316 atagacatttagagttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacgt--gttttattaattatgggaccaaa 232219  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| |||||||||||||  |||||||||||||    
T  232218 atgaaaaattgaaattatttaagggaccaatggatc 232183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 329
Target Start/End: Complemental strand, 27081035 - 27080923
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||||||||| |||||||||||||||  ||||||||  ||| |||   |||||||||||| ||||||||||||||||| |||||||||||  ||| || |    
T  27081035 agatttatttcgcaaacggagaaaaaagtgagggacttaaatgtaaattttattaattgtaagaccaaaatgaaaactcgaaattatttaagggatcatt 27080936  T
Q  317 ggatcaaataatc 329  Q
    |||||||||||||    
T  27080935 ggatcaaataatc 27080923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 32506984 - 32507116
Alignment:
Q  171 ttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa-gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttat 269  Q
    |||||| |||||||||||||| |||||  |||||| ||||||||||| |||||||||||||||| ||||||||  |||||||| |||||      |||||    
T  32506984 ttaaggttggtccaccatagatatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggactaaaacaccatttttat 32507083  T
Q  270 taattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||| |||| || |||||||||||| ||||||||    
T  32507084 taaatgtgggatcaaaatgaaaacatgaaatta 32507116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 34024073 - 34024178
Alignment:
Q  221 ttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggat 320  Q
    ||||||| ||||||||| ||||  ||||||| ||||| ||||  ||||||||||||| |||||||||||||| |||||||||||| ||| | || |||||    
T  34024073 ttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaattattt-gagaatcattggat 34024171  T
Q  321 caaataa 327  Q
    |||||||    
T  34024172 caaataa 34024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 6702852 - 6702960
Alignment:
Q  193 atttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||| ||||| |||||||  ||||||     ||||||||||||| ||||||||||||||    
T  6702852 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga-taaaacgccatttttattaattgtgggaccaaaatgaaaa 6702950  T
Q  293 cttgaaatta 302  Q
      ||||||||    
T  6702951 tatgaaatta 6702960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 327
Target Start/End: Original strand, 7311667 - 7311839
Alignment:
Q  156 tatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggac 252  Q
    |||| ||||||| | |||||| |||| ||||||||||||   ||| | ||||| ||||| || | |||||||||||||||  || |||||  | ||||||    
T  7311667 tatggtggaccactcttaaggttggttcaccatagacatcatttgga-ttaaacttaactgtgaggatttatttggcaaatagataaaaaagtaagggac 7311765  T
Q  253 caaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    ||||| ||||| ||||||||||||| || |||||||||||||| ||||||||||  |||||| || || ||||||    
T  7311766 caaaaggtacg-tttattaattgtgggatcaaaatgaaaacttaaaattatttaagggaccattgaattaaataa 7311839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 34023982 - 34023887
Alignment:
Q  232 acggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||||| ||||  ||||||||||||| ||||| |||||||||||||  |||||||||||||||| |||||||||   |||||| | ||||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataa 34023887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 18346731 - 18346840
Alignment:
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
    ||||||| |||||| |||||||||  |||||||||||||||| |||| |||| ||||||| |||||||     ||||||||||||| |||||||||||||    
T  18346731 catttgaggttaaaattaacagtcg-gatttatttggcaaacagagacaaacgtgagggatcaaaacgccatttttattaattgtgggaccaaaatgaaa 18346829  T
Q  292 acttgaaatta 302  Q
    |  ||||||||    
T  18346830 atatgaaatta 18346840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 23392390 - 23392240
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccataga--catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggga 251  Q
    |||||| ||||||| |||||||| || |||||| |||   ||||||  |||||| |||||| | | |||||||||||||||||||| ||||  |||||||    
T  23392390 tctatggtggaccacttttaaggttgatccaccttagcatcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgaggga 23392291  T
Q  252 ccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |  |||||     ||||||||||||| |||||||||||||||  |||||||    
T  23392290 cttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaatta 23392240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 321
Target Start/End: Original strand, 233543 - 233673
Alignment:
Q  187 atagacatttgaagttaaagttaacagtca-agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaa 285  Q
    ||||||||||  |||||||||||||| |   ||||||||||||||||    |||||| | ||||||| |||||||    |||||||||| || |||||||    
T  233543 atagacatttagagttaaagttaacaatttgagatttatttggcaaa----gaaaaaat-gagggactaaaacgtgttttttattaattatgggaccaaa 233637  T
Q  286 atgaaaacttgaaattatttagaggaccaatggatc 321  Q
    ||||||| ||||||||||||| ||||||||| ||||    
T  233638 atgaaaaattgaaattatttaaaggaccaattgatc 233673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 327
Target Start/End: Original strand, 27967054 - 27967164
Alignment:
Q  217 agatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaat 316  Q
    |||||| ||||||||||| || |||| || | ||| ||||| ||| | | ||||||||||| || ||||||||||||| | |||||||| | |||||| |    
T  27967054 agatttttttggcaaacgtaggaaaaattaaaggatcaaaatgtatgttctattaattgtgggatcaaaatgaaaactaggaattatttgggggaccatt 27967153  T
Q  317 ggatcaaataa 327  Q
    |||||||||||    
T  27967154 ggatcaaataa 27967164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 5187562 - 5187712
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagaca---tttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| || |||| |||||||| |||||||| |||||||   ||||  |||||| ||||| |||| ||||||||||||||||||| |||||  | |||     
T  5187562 tctatggtgaaccacttttaaggttggtccactatagacaacatttgg-gttaaacttaaccgtcaggatttatttggcaaacggacaaaaaggtaagga 5187660  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    || ||||||     |||||||||| || ||||||||||||||| ||||||||    
T  5187661 actaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaatta 5187712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 2687930 - 2688014
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    ||||||||||||||||||| |||||  |||||||| ||||||     ||||||||||||| ||| ||||||||||| ||||||||    
T  2687930 gatttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaatta 2688014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 6701526 - 6701406
Alignment:
Q  182 ccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacga--tttattaattgtgag 279  Q
    |||| ||||| |||||| ||||||||| |||   | |||||||||||||||||||| ||||  |||||||| ||||  ||| |  ||||||||||||| |    
T  6701526 ccacaatagatatttgaggttaaagttgacataaacgatttatttggcaaacggaggaaaatgtgagggactaaaa--taccatttttattaattgtggg 6701429  T
Q  280 accaaaatgaaaacttgaaatta 302  Q
    |||||||||||||  ||||||||    
T  6701428 accaaaatgaaaatatgaaatta 6701406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 2687340 - 2687256
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaatta 302  Q
    |||||||||||||||||||| ||||  ||| |||| ||||||     ||||||||||||| || |||||||||||| ||||||||    
T  2687340 gatttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaatta 2687256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 11967391 - 11967334
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaac 211  Q
    |||||||||||||  | | |||| |||||||| |||||||||||| ||||||||||||    
T  11967391 tctatgatggacccctctcaaggttggtccacaatagacatttgaggttaaagttaac 11967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 15730036 - 15730145
Alignment:
Q  219 atttatttggcaaacggagaaaaacttgagggaccaaaacgta-cgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||| |||||||||  ||||  ||||||||||||| |||    ||||||||||||| |||||||||||||| | ||||||| ||   |||||||||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  318 gatcaaataa 327  Q
     ||| |||||    
T  15730136 aatctaataa 15730145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 124143 - 123970
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||| ||||||| | |||||| |||||||||||||| |||||  |||||| ||||| || | |||||||||||||||| ||| ||||  |||||||||    
T  124143 tctatggtggaccactcttaaggttggtccaccatagatatttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggacc 124044  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataa 327  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  124043 aaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggaccattggatcaaataa 123970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 141 - 336
Target Start/End: Original strand, 125159 - 125357
Alignment:
Q  141 aaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggag 237  Q
    |||||||  |||||||||| ||||||| |||||||| ||||||| |||| ||||   |||  |||||| ||||| || | ||||||||||||||||||||    
T  125159 aaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggag 125258  T
Q  238 aaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaataatcttatttt 336  Q
     ||||  ||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||   |||||| |||||||||||| ||| ||||    
T  125259 gaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataagcttttttt 125357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 63037 - 63234
Alignment:
Q  119 agatctaaaggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    ||||| || |||||||||| || ||||| |||||| | |||| ||||||| | |||||  || |||| |||||||||||||||||||| ||||||||||     
T  63037 agatcaaacggttaaaatttaaaaaattaatgaagtt-tatggtggaccattcttaagattgatccatcatagacatttgaagttaaacttaacagtcag 63135  T
Q  218 g-atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    | ||||||||||||||||||||||||  |||||||| ||||||     ||||||||||||| |||||||||||||||  |||||||||| |||||||||    
T  63136 ggatttatttggcaaacggagaaaaatgtgagggactaaaacgccatctttattaattgtgggaccaaaatgaaaacacgaaattatttggaggaccaa 63234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 315
Target Start/End: Complemental strand, 61963 - 61864
Alignment:
Q  216 aagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||     |||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  61963 aagatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattatttaggggaccaa 61864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 587 - 784
Alignment:
Q  119 agatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag 218  Q
    ||||| || |||| ||||||| |||||||  |||||||||| ||||||| | |||||| |||||||  ||| |||||||| |||||| || ||| ||| |    
T  587 agatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatatacatttgaggttaaacttgacaatcagg 686  T
Q  219 -atttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
     ||||||||| |  || |||| ||||||||||||||||||| |  | ||||||| || || |||||||||||||||| ||||||| ||||||||||||    
T  687 gatttatttgaccgacagagacaaacttgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattagaggaccaa 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 93 - 292
Target Start/End: Original strand, 2365 - 2556
Alignment:
Q  93 atctaacggtcccttttatcataaatagatctaaaggttaaaattaacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccat-aga 191  Q
    ||||||||||||||||||  ||||||||||| || |||||||||||| ||         |||||| ||| ||||| |||||||| ||||||||||| | |    
T  2365 atctaacggtcccttttaagataaatagatcgaatggttaaaattaataa---------ggtctacgatagaccacttttaaggttggtccaccattaca 2455  T
Q  192 catttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaa 291  Q
     ||||| |||||||||||||||||   |||||||||| |||| ||| ||||  | ||||||||||| ||||  ||||||||||||| |||||||||||||    
T  2456 tatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaaggtactttttattaattgtgggaccaaaatgaaa 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 327
Target Start/End: Complemental strand, 18922 - 18813
Alignment:
Q  218 gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaatg 317  Q
    |||||||||||||||||||| ||||  |||||||| ||||| || | |||||||| | || ||||||||||||||||| |||||||||| |||| |||||    
T  18922 gatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaaggatcaatg 18823  T
Q  318 gatcaaataa 327  Q
    ||||||||||    
T  18822 gatcaaataa 18813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 127608 - 127446
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaag-atttatttggcaaacggagaaaaacttgagggac 252  Q
    |||||| ||||||| | |||||| || | |||||||||||||||| |||||||||||| |||| | ||||||||| |  ||||||  |||| ||||||||    
T  127608 tctatggtggaccactcttaaggttgtttcaccatagacatttgaggttaaagttaactgtcagggatttatttgaccgacggaggcaaacatgagggac 127509  T
Q  253 caaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||| |  | ||||||| || || |||||||| ||||||||||||||| |||| |||||||    
T  127508 caaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaa 127446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 43514 - 43668
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacat---ttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgaggg 250  Q
    |||||| ||||||| | |||||  |||||||||||||||||   |||  |||||| ||||| |||| || ||||||||||||||||| ||||  ||||||    
T  43514 tctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggacttatttggcaaacggaggaaaaagtgaggg 43613  T
Q  251 accaaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 305  Q
    ||  |||| |||| |||||||||| || ||||||||| ||||||| |||||||||    
T  43614 acttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattattt 43668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 42506 - 42458
Alignment:
Q  229 caaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtg 277  Q
    ||||||||||||||  ||| ||||||||||||||  |||||||||||||    
T  42506 caaacggagaaaaatctgaaggaccaaaacgtactttttattaattgtg 42458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 32745 - 32585
Alignment:
Q  154 tctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaagatttatttggcaaacggagaaaaacttgagggacc 253  Q
    |||||||||||||| |  ||||| ||||||||||||||||||| | ||||||||||||||| | ||||||||||||  | ||||| |||| || || |||    
T  32745 tctatgatggaccactcctaaggttggtccaccatagacatttaaggttaaagttaacagttaggatttatttggccgatggagacaaacatg-ggcacc 32647  T
Q  254 aaaacgtacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 315  Q
    |||||    | ||||||| || || ||||||||| |||||||||||||| |||  |||||||    
T  32646 aaaacacgagttttattagttatgtgaccaaaataaaaacttgaaattaattacgggaccaa 32585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 21337 - 21163
Alignment:
Q  119 agatctaaaggttaaaatt-aacaaatttatgaaggtctatgatggaccaattttaaggctggtccaccatagacatttgaagttaaagttaacagtcaa 217  Q
    ||||| || |||||||||| || ||||| |||||| |||||| ||||||| | | |||| ||||||||||||||||||||  |||||| ||||||   ||    
T  21337 agatcaaacggttaaaatttaaaaaattaatgaag-tctatggtggaccactctgaaggttggtccaccatagacatttgtggttaaacttaacaacgaa 21239  T
Q  218 -gatttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgtgagaccaaaatgaaaa 292  Q
     |||||||||||||||||||| ||||  | ||||| ||||| ||||  |||||||||| || ||| ||||||||||    
T  21238 tgatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaa 21163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 1050 - 1178
Alignment:
Q  178 tggtccaccatagacatttgaagttaaagttaacagtcaaga-tttatttggcaaacggagaaaaacttgagggaccaaaacgtacgatttattaattgt 276  Q
    ||||||||||||||||||||  |||||||||||||  || || |||||||| |  ||||||   || ||||||||||||||| |  | ||||||| || |    
T  1050 tggtccaccatagacatttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattacttat 1149  T
Q  277 gagaccaaaatgaaaacttgaaattattt 305  Q
    | |||||||||||||||| ||||||||||    
T  1150 gggaccaaaatgaaaactggaaattattt 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 733 - 775
Alignment:
Q  200 gttaaagttaacagtcaagatttatttggcaaacggagaaaaa 242  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||    
T  733 gttaaagttaacagtcaggatttatatggcaaacggaggaaaa 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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