View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9498_low_6 (Length: 246)
Name: NF9498_low_6
Description: NF9498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9498_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 21814723 - 21814950
Alignment:
| Q |
1 |
aaaggcgtaagcttgagttcatcggctgaaagcaagatgaacaccaacaaagagacggagaagacacttgctcaatatggcgtagatgctgagcttcttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
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| T |
21814723 |
aaaggcgtaagcttgagttcatcggctgaaagcaagatgaacaccaacaaagagacggagaagacacttgctcaatatggtgtagatgccgagcttcttg |
21814822 |
T |
|
| Q |
101 |
cagagtttgagcaatctagagtttatggcaaatcatttgaatactcaaagactattcttgatcctccaaggttagtttctgaggagaaaatgattacata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
21814823 |
cagagtttgagcaatctagagtttatggcaaatcatttgaatactcaaagactattcttgatcctcccaggttagtttctgaggagaaaatgattacata |
21814922 |
T |
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| Q |
201 |
tttgtctagaatccaaaggggtggcttt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
21814923 |
tttgtctagaatccaaaggggtggcttt |
21814950 |
T |
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