View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9502_6 (Length: 330)
Name: NF9502_6
Description: NF9502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9502_6 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34899742 - 34899975
Alignment:
| Q |
1 |
tattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttgagac |
100 |
Q |
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| T |
34899742 |
tattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttgagac |
34899841 |
T |
|
| Q |
101 |
tataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagaagaactaaagagagatgtgtttctatgcatatagg |
200 |
Q |
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| T |
34899842 |
tataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagaagaactaaagagagatgtgtttatatgcatatagg |
34899941 |
T |
|
| Q |
201 |
taaagtttggtagtttcaactttcccgttgagat |
234 |
Q |
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|||||||||||||||||||||||| |||||||| |
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| T |
34899942 |
taaagtttggtagtttcaactttcaagttgagat |
34899975 |
T |
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