View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9504_low_77 (Length: 218)
Name: NF9504_low_77
Description: NF9504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9504_low_77 |
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Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 36142487 - 36142641
Alignment:
| Q |
49 |
gaaggtagataagccggaatcagcataccggagcatagcttcaacggcgtcgtctcgatcaatcctcccccaaccaccacttgtctgccacattccatta |
148 |
Q |
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| T |
36142487 |
gaaggtagataagccggaatcagcataccggagcatagcttcaacggcgtcgtctcgatcaatcctcccccaaccaccacttgtctgccacattccatta |
36142586 |
T |
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| Q |
149 |
agaactctacatatttccaatgaatcgttcccgttactcagtttcactctctgct |
203 |
Q |
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| T |
36142587 |
agaactctacatatttccaatgaatcgttcccgttactcagtttcactctctgct |
36142641 |
T |
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