View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9504_low_80 (Length: 201)
Name: NF9504_low_80
Description: NF9504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9504_low_80 |
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Alignment Details
Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35576174 - 35576288
Alignment:
| Q |
1 |
agactaaaatcatatttaataccgtgagtttttggaaagggcgttgatcggcggcgggataatcagcggtgatttcaagggcggacgaggaggaatcgaa |
100 |
Q |
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| T |
35576174 |
agactaaaatcatatttaataccgtgagtttttggaaagggcgttgatcggcggcgggataatcagcggtgatttcaagggcggacgaggaggaatcgaa |
35576273 |
T |
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| Q |
101 |
atcctgaagttcaac |
115 |
Q |
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||||||||||||||| |
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| T |
35576274 |
atcctgaagttcaac |
35576288 |
T |
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