View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9505_low_8 (Length: 240)
Name: NF9505_low_8
Description: NF9505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9505_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6439479 - 6439700
Alignment:
| Q |
1 |
ttgaaaaaattgagagaaaatgattgttgaattaaattaagctttttgaaattgaaaccgtattttgataggtttgcttaaaaacctaataattttgtgt |
100 |
Q |
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| T |
6439479 |
ttgaaaaaattgagagaaaatgattgttgaattaaattaagctttttgaaattgaaaccgtattttgataggtttgcttaaaaacctaataattttgtgt |
6439578 |
T |
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| Q |
101 |
tcttcacatttctagggtttatgtttggttattttcgatgcttgtaattttgtcctaagttattactgttgagataagttagtaaactgttttgtgttga |
200 |
Q |
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| T |
6439579 |
ttttcacatttctagggtttatgtttggttattttcgatgcttgtaattttgtcctaagttattactgttgagataagttagtaaactg-tttgtgttga |
6439677 |
T |
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| Q |
201 |
attttgaaggtggagtattattt |
223 |
Q |
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| T |
6439678 |
attttgaaggtggagtattattt |
6439700 |
T |
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