View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9507_low_22 (Length: 279)
Name: NF9507_low_22
Description: NF9507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9507_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 48494241 - 48494498
Alignment:
| Q |
1 |
tgcttgatttttgcatgaccatgtttattaatccatcccaccattgcacttgaaccaaccatctttccatctctagaaaatccaatccccacccacccaa |
100 |
Q |
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| T |
48494241 |
tgcttgatttttgcatgaccatgtttattaatccatcccaccattgcacttgaaccaaccatctttccatctctagaaaatccaatccccacccacccaa |
48494340 |
T |
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| Q |
101 |
ctgtgtagggtgcagataatatgattgttgtggtatcaccattttttgtgtactgcaat-aaaacctcacgacattattagatgcaaaggaacacctcat |
199 |
Q |
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| T |
48494341 |
ctgtgtagggtgcagataatatgattgttgtggtatcaccattttttgtgtactgcaataaaaacctcacgacattattagatgcaaaggaacacctcat |
48494440 |
T |
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| Q |
200 |
gacattcaaataataataaatctttaatttctggaaagatttttgaataggagcagtt |
257 |
Q |
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| T |
48494441 |
gacattcaaataataataaatctttaatttctgtaaagattttagaataggagcagtt |
48494498 |
T |
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