View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9511_high_1 (Length: 358)
Name: NF9511_high_1
Description: NF9511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9511_high_1 |
 |  |
|
| [»] scaffold0856 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 30272422 - 30272761
Alignment:
| Q |
1 |
tatttagcttttatataacacggaaataccttcttctattatcccttcgatgacatccgataaaattggaatgatacagagaagattagcatggccatgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30272422 |
tatttagcttttatataacacggaaataccttcttctattatcccttcaatgacatccgataaaattggaatgatacagagaagattagcatggccatgc |
30272521 |
T |
 |
| Q |
101 |
gcaagaatgacacgcacaaatcaagaaatgacccaaattannnnnnnnnnnnnnnncttccttcatcaattcgttcac-tgcgtcttcctttgattccct |
199 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30272522 |
gcaacaatgacacgcacaaatcgagaaatgacccaaattattttttacttttttttcttccttcatcaattcgttcacctgcgtcttcctttgattccct |
30272621 |
T |
 |
| Q |
200 |
tcgttggctgcggttattggcttcttttttcatcatcccatgtgcttcgctatgatgtttgaaaacaaacttgactggcttttcactaatcttactcatg |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30272622 |
tcgttggctgcggttattggcttcttttttcatcatcccatgagcttcgctatgatgtttgaaaacaaacttgactggcttttcactaatcttactcatg |
30272721 |
T |
 |
| Q |
300 |
gatgcatagtgtctcactatcata-ttttggttctctgtg |
338 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30272722 |
gatgcatagtgtctcactatcatatttttggttctctgtg |
30272761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 31142075 - 31141945
Alignment:
| Q |
10 |
tttatataacacggaaataccttcttctattatcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaat |
108 |
Q |
| |
|
|||||||||| || |||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| || |
|
|
| T |
31142075 |
tttatataacgcgcaaatgctctcttctattgtcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggat |
31141976 |
T |
 |
| Q |
109 |
gacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||||||||| ||||||| ||||||| |
|
|
| T |
31141975 |
gacacgcacaaatcgagaaatggtccaaatt |
31141945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30270518 - 30270472
Alignment:
| Q |
1 |
tatttagcttttatataacacggaaataccttcttctattatccctt |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30270518 |
tatttagcttttatataacacggaaataccttcttctagtatccctt |
30270472 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 34470027 - 34470066
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagag |
81 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34470027 |
tcccttcggggacatccgataaaattggaatgatacagag |
34470066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0856 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0856
Description:
Target: scaffold0856; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 189 - 338
Target Start/End: Complemental strand, 4872 - 4719
Alignment:
| Q |
189 |
tttgattcccttcgttggctgcggttattggcttcttttttcatcatc---ccatgtgcttcgctatgatgtttgaaaacaaacttgactggcttttcac |
285 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4872 |
tttgattcccttcgttggctgcagttattggcttcttttttcatcatcatcccatgtgcttcgctatgatgttcgaaaacaaacttgactggcttttcac |
4773 |
T |
 |
| Q |
286 |
taatcttactcatggatgcatagtgtctcactatcata-ttttggttctctgtg |
338 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4772 |
taatcttactcatggatgcatagtgtctcactatcatatttttggttctctgtg |
4719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0856; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5025 - 4885
Alignment:
| Q |
1 |
tatttagcttttatataacacggaaataccttcttctattatcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatg |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
5025 |
tatttagcttttatataacacgaaaataccttcttctagtatcccttcggggacattcgataaaattggaatgatacagagaagatcagcatggcccatg |
4926 |
T |
 |
| Q |
100 |
cgcaagaatgacacgcacaaatcaagaaatgacccaaatta |
140 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
4925 |
cgcaaggatgacacgcacaaatcgagaaatgacccaaatta |
4885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 21634901 - 21634803
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
21634901 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
21634803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 5515537 - 5515604
Alignment:
| Q |
64 |
aattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatg |
130 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||| |
|
|
| T |
5515537 |
aattggaacgatacagagaagattagcatggcccttgcgcaaagatgacacgcacaaatcgagaaatg |
5515604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 32089360 - 32089262
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
32089360 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
32089262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 32096833 - 32096735
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
32096833 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
32096735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 39128587 - 39128489
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
39128587 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
39128489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 39478458 - 39478556
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
39478458 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
39478556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 41706724 - 41706626
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
41706724 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
41706626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 41812162 - 41812260
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
41812162 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
41812260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 32093117 - 32093019
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || || ||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
32093117 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgtgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
32093019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 32088005 - 32087907
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||| ||||| || ||| |||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
32088005 |
tcccttcggggacatctgataaaattggaacgatacagagaagattaacatggcccctgcacaaggatgacacgcacaaatcgagaaatggtccaaatt |
32087907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 22785426 - 22785386
Alignment:
| Q |
38 |
attatcccttcgatgacatccgataaaattggaatgataca |
78 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
22785426 |
attatccctttgaagacatccgataaaattggaacgataca |
22785386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 26217329 - 26217231
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
26217329 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
26217231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 7619025 - 7618947
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatg-gccatgcgcaagaatgacacgcacaa |
119 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
7619025 |
tcccttcggggacatccgataaaattggaatgatacagagaagattagcatgatccatgcgcaaagatgacacgcacaa |
7618947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 11187906 - 11187960
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatggcc |
96 |
Q |
| |
|
||||||||| ||| |||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
11187906 |
tcccttcgaggacgtccggaaaaattggaacgatacagagaagattagcatggcc |
11187960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 18872001 - 18871931
Alignment:
| Q |
52 |
gacatccgataaaattggaatgatacagagaagattagcatgg--ccatgcgcaagaatgacacgcacaaa |
120 |
Q |
| |
|
|||||| |||||| ||| ||||||||||| ||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
18872001 |
gacatctgataaagttgaaatgatacagacaagattagcatggccccttgcgcaaagatgacacgcacaaa |
18871931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 38044616 - 38044518
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
38044616 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
38044518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 48837988 - 48838086
Alignment:
| Q |
42 |
tcccttcgatgacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatgacccaaatt |
139 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
48837988 |
tcccttcggggacatccgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatggtccaaatt |
48838086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 50152365 - 50152444
Alignment:
| Q |
52 |
gacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatg |
130 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||| |
|
|
| T |
50152365 |
gacatctgataaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcacaaatcgagaaatg |
50152444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 50903997 - 50904076
Alignment:
| Q |
52 |
gacatccgataaaattggaatgatacagagaagattagcatgg-ccatgcgcaagaatgacacgcacaaatcaagaaatg |
130 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| || || |||||||| ||||||||||||| || ||||||| |
|
|
| T |
50903997 |
gacatccgataaaattggaacgatacagagaagattagcaaggcccctgcgcaaggatgacacgcacaattcgagaaatg |
50904076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 50916242 - 50916160
Alignment:
| Q |
53 |
acatccgataaaattggaatgatacagagaagattagcatgg-----ccatgcgcaagaatgacacgcacaaatcaagaaatg |
130 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||| |||||| || ||| |||| ||||||||||||||| ||||||| |
|
|
| T |
50916242 |
acatccgataaaattggaacgatatagagaagattggcatggatggcccttgcacaaggatgacacgcacaaattgagaaatg |
50916160 |
T |
 |
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Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 32271421 - 32271350
Alignment:
| Q |
60 |
ataaaattggaatgatacagagaagattagcatggcca-tgcgcaagaatgacacgcacaaatcaagaaatg |
130 |
Q |
| |
|
|||||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||||||||| ||||||| |
|
|
| T |
32271421 |
ataaaattggaacgatacaaagaagattatcatggcccctgcgcaaggatgacacgcacaaatcgagaaatg |
32271350 |
T |
 |
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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 7772377 - 7772341
Alignment:
| Q |
59 |
gataaaattggaatgatacagagaagattagcatggc |
95 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7772377 |
gataaaattggaacgatacagagaagattagcatggc |
7772341 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 7777985 - 7777949
Alignment:
| Q |
59 |
gataaaattggaatgatacagagaagattagcatggc |
95 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7777985 |
gataaaattggaacgatacagagaagattagcatggc |
7777949 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 7792777 - 7792741
Alignment:
| Q |
59 |
gataaaattggaatgatacagagaagattagcatggc |
95 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
7792777 |
gataaaattggaacgatatagagaagattagcatggc |
7792741 |
T |
 |
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Target: chr5 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 18352651 - 18352682
Alignment:
| Q |
53 |
acatccgataaaattggaatgatacagagaag |
84 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
18352651 |
acatccgataaaattggaatgatacagagaag |
18352682 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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