View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9513_high_3 (Length: 304)

Name: NF9513_high_3
Description: NF9513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9513_high_3
NF9513_high_3
[»] chr4 (56 HSPs)
chr4 (7-226)||(18781731-18781950)
chr4 (218-291)||(46212543-46212616)
chr4 (223-291)||(3901332-3901400)
chr4 (223-291)||(46803631-46803699)
chr4 (220-291)||(4264131-4264202)
chr4 (217-291)||(3442537-3442611)
chr4 (223-291)||(5735271-5735339)
chr4 (223-291)||(28166274-28166342)
chr4 (223-291)||(45198533-45198601)
chr4 (223-291)||(47579287-47579355)
chr4 (221-291)||(6494586-6494656)
chr4 (223-291)||(5744276-5744344)
chr4 (223-291)||(21859112-21859180)
chr4 (223-291)||(21914975-21915043)
chr4 (223-291)||(26205897-26205965)
chr4 (225-289)||(28151993-28152057)
chr4 (225-291)||(49768447-49768513)
chr4 (228-291)||(37688226-37688289)
chr4 (221-291)||(39786549-39786619)
chr4 (223-291)||(7739012-7739080)
chr4 (223-291)||(18360166-18360234)
chr4 (223-291)||(36602694-36602762)
chr4 (223-291)||(55190907-55190975)
chr4 (220-291)||(4209360-4209431)
chr4 (222-289)||(23255934-23256001)
chr4 (223-291)||(5123350-5123418)
chr4 (228-291)||(20678780-20678843)
chr4 (218-291)||(1377027-1377100)
chr4 (222-291)||(39195674-39195743)
chr4 (223-291)||(19652448-19652516)
chr4 (222-291)||(19525907-19525976)
chr4 (223-291)||(19634041-19634109)
chr4 (219-291)||(25644355-25644427)
chr4 (215-291)||(53568346-53568422)
chr4 (219-258)||(28152217-28152256)
chr4 (245-291)||(14958030-14958076)
chr4 (245-291)||(19731358-19731404)
chr4 (219-291)||(6923133-6923205)
chr4 (223-291)||(19170732-19170800)
chr4 (251-291)||(42187172-42187212)
chr4 (223-291)||(50033020-50033088)
chr4 (223-258)||(3442344-3442379)
chr4 (223-258)||(5735497-5735532)
chr4 (223-258)||(7738819-7738854)
chr4 (223-258)||(45198340-45198375)
chr4 (223-258)||(47579512-47579547)
chr4 (222-251)||(19170538-19170567)
chr4 (221-258)||(20678586-20678623)
chr4 (221-258)||(54438155-54438192)
chr4 (222-258)||(5744082-5744118)
chr4 (226-258)||(19525717-19525749)
chr4 (251-291)||(23603840-23603880)
chr4 (245-289)||(31486308-31486352)
chr4 (223-291)||(39260324-39260391)
chr4 (223-291)||(50035539-50035607)
chr4 (223-291)||(51737146-51737214)
[»] chr8 (36 HSPs)
chr8 (223-291)||(30289924-30289992)
chr8 (218-291)||(2805669-2805742)
chr8 (222-291)||(29790941-29791010)
chr8 (223-291)||(38845200-38845268)
chr8 (220-291)||(38739654-38739725)
chr8 (221-291)||(45081810-45081880)
chr8 (223-291)||(40013651-40013719)
chr8 (223-291)||(43066127-43066195)
chr8 (223-291)||(3293295-3293363)
chr8 (223-291)||(37709899-37709967)
chr8 (217-291)||(13138325-13138399)
chr8 (223-291)||(2986339-2986407)
chr8 (223-291)||(30380530-30380598)
chr8 (222-291)||(1580958-1581027)
chr8 (223-291)||(8351073-8351141)
chr8 (221-291)||(6470843-6470913)
chr8 (225-291)||(23248779-23248845)
chr8 (223-289)||(39361128-39361191)
chr8 (221-258)||(23249078-23249115)
chr8 (223-291)||(14847210-14847278)
chr8 (219-291)||(18809272-18809344)
chr8 (223-258)||(2805476-2805511)
chr8 (223-258)||(18809502-18809537)
chr8 (223-258)||(30290150-30290185)
chr8 (223-258)||(31127805-31127840)
chr8 (223-258)||(45082038-45082073)
chr8 (223-289)||(45253749-45253816)
chr8 (245-291)||(886260-886306)
chr8 (219-289)||(11854520-11854590)
chr8 (221-258)||(2986551-2986588)
chr8 (223-260)||(29708785-29708822)
chr8 (222-258)||(3293100-3293136)
chr8 (222-258)||(14522605-14522641)
chr8 (217-261)||(14583715-14583759)
chr8 (219-291)||(31127998-31128070)
chr8 (223-291)||(44123673-44123741)
[»] chr1 (46 HSPs)
chr1 (221-291)||(48265004-48265074)
chr1 (222-291)||(25531777-25531846)
chr1 (223-291)||(48219835-48219903)
chr1 (222-291)||(32988542-32988611)
chr1 (218-291)||(52378984-52379057)
chr1 (223-291)||(39354457-39354525)
chr1 (223-291)||(50539260-50539328)
chr1 (224-291)||(49805445-49805512)
chr1 (221-291)||(50876362-50876432)
chr1 (223-291)||(30529243-30529311)
chr1 (223-291)||(38458729-38458797)
chr1 (223-291)||(3529176-3529244)
chr1 (223-291)||(23569867-23569935)
chr1 (223-289)||(42708504-42708570)
chr1 (218-291)||(37281087-37281160)
chr1 (219-291)||(3898764-3898836)
chr1 (223-287)||(32565746-32565810)
chr1 (228-291)||(45235038-45235101)
chr1 (234-291)||(29161853-29161910)
chr1 (242-291)||(47222233-47222282)
chr1 (227-291)||(4605002-4605066)
chr1 (219-291)||(16265029-16265101)
chr1 (219-291)||(16266158-16266230)
chr1 (223-291)||(16751646-16751714)
chr1 (219-291)||(26441633-26441705)
chr1 (219-291)||(43680065-43680137)
chr1 (219-289)||(24982347-24982417)
chr1 (220-258)||(30529047-30529085)
chr1 (245-291)||(38738171-38738217)
chr1 (238-291)||(1849714-1849767)
chr1 (223-291)||(48376158-48376226)
chr1 (223-291)||(50481278-50481346)
chr1 (222-258)||(50876590-50876626)
chr1 (223-258)||(3898571-3898606)
chr1 (226-289)||(14075738-14075801)
chr1 (223-258)||(16265259-16265294)
chr1 (223-258)||(16266388-16266423)
chr1 (223-258)||(25532004-25532039)
chr1 (223-258)||(26441860-26441895)
chr1 (240-291)||(31971580-31971631)
chr1 (223-258)||(39354264-39354299)
chr1 (223-258)||(43680296-43680331)
chr1 (213-252)||(46862546-46862585)
chr1 (223-258)||(48264811-48264846)
chr1 (219-260)||(41855525-41855566)
chr1 (223-251)||(23569674-23569702)
[»] chr5 (40 HSPs)
chr5 (222-291)||(23988578-23988647)
chr5 (219-291)||(32334833-32334905)
chr5 (223-291)||(35448190-35448258)
chr5 (222-291)||(42148306-42148375)
chr5 (223-291)||(29627268-29627336)
chr5 (223-291)||(38697963-38698031)
chr5 (223-291)||(39894781-39894849)
chr5 (223-291)||(40512873-40512941)
chr5 (224-291)||(5364421-5364488)
chr5 (223-291)||(32002207-32002275)
chr5 (223-291)||(5213115-5213183)
chr5 (222-291)||(37516143-37516212)
chr5 (223-291)||(4925031-4925099)
chr5 (215-291)||(30779938-30780014)
chr5 (223-291)||(35290286-35290354)
chr5 (217-289)||(37843770-37843842)
chr5 (223-291)||(39036410-39036478)
chr5 (223-291)||(41411351-41411419)
chr5 (223-282)||(16954690-16954749)
chr5 (222-291)||(1830653-1830722)
chr5 (230-291)||(14475427-14475488)
chr5 (230-291)||(43517253-43517314)
chr5 (219-291)||(970134-970206)
chr5 (219-291)||(39405760-39405832)
chr5 (223-291)||(40316121-40316189)
chr5 (219-291)||(43067225-43067297)
chr5 (219-291)||(4300025-4300097)
chr5 (219-291)||(16048079-16048151)
chr5 (219-291)||(22613902-22613974)
chr5 (223-263)||(37304366-37304406)
chr5 (223-258)||(970364-970399)
chr5 (223-258)||(4299833-4299868)
chr5 (223-258)||(22613709-22613744)
chr5 (223-258)||(29627494-29627529)
chr5 (223-258)||(35447997-35448032)
chr5 (219-258)||(38698189-38698228)
chr5 (223-258)||(42148533-42148568)
chr5 (251-297)||(19868872-19868918)
chr5 (213-258)||(1098401-1098446)
chr5 (247-291)||(19889678-19889722)
[»] chr7 (38 HSPs)
chr7 (223-291)||(36819696-36819764)
chr7 (220-291)||(19072766-19072837)
chr7 (222-291)||(47080979-47081048)
chr7 (223-291)||(2400285-2400353)
chr7 (223-291)||(28185601-28185669)
chr7 (223-291)||(42086831-42086899)
chr7 (223-291)||(47713695-47713763)
chr7 (223-289)||(47713774-47713840)
chr7 (223-291)||(31466551-31466619)
chr7 (223-291)||(37951138-37951206)
chr7 (223-291)||(44479913-44479981)
chr7 (223-289)||(32619137-32619203)
chr7 (221-291)||(36905524-36905594)
chr7 (223-291)||(36859401-36859469)
chr7 (223-291)||(23474162-23474230)
chr7 (224-291)||(31110625-31110690)
chr7 (223-289)||(4612282-4612348)
chr7 (223-291)||(42834485-42834553)
chr7 (219-291)||(10464308-10464380)
chr7 (223-291)||(21392018-21392086)
chr7 (219-291)||(37231757-37231829)
chr7 (217-258)||(34478002-34478043)
chr7 (223-291)||(34478204-34478272)
chr7 (219-291)||(35500940-35501012)
chr7 (219-258)||(36819922-36819961)
chr7 (232-291)||(47537932-47537991)
chr7 (229-291)||(4033297-4033359)
chr7 (220-258)||(31466355-31466393)
chr7 (223-258)||(10464115-10464150)
chr7 (245-288)||(33613238-33613281)
chr7 (223-258)||(36643965-36644000)
chr7 (223-258)||(36905752-36905787)
chr7 (223-258)||(37950945-37950980)
chr7 (223-258)||(47081206-47081241)
chr7 (245-291)||(38198503-38198549)
chr7 (222-291)||(31497896-31497965)
chr7 (219-291)||(36643158-36643230)
chr7 (227-291)||(48531326-48531390)
[»] chr6 (22 HSPs)
chr6 (223-291)||(643624-643692)
chr6 (221-291)||(11114563-11114633)
chr6 (221-291)||(31854816-31854886)
chr6 (221-291)||(20662252-20662323)
chr6 (216-291)||(22020269-22020344)
chr6 (223-291)||(24150741-24150809)
chr6 (220-291)||(8796047-8796118)
chr6 (223-289)||(18991904-18991970)
chr6 (217-291)||(29403638-29403712)
chr6 (223-287)||(30237165-30237229)
chr6 (223-291)||(33121542-33121610)
chr6 (220-291)||(7098066-7098133)
chr6 (217-291)||(25435406-25435479)
chr6 (220-291)||(13207146-13207217)
chr6 (248-291)||(29986351-29986394)
chr6 (222-258)||(20662058-20662094)
chr6 (219-258)||(18992129-18992168)
chr6 (223-258)||(29979024-29979059)
chr6 (215-258)||(30237393-30237436)
chr6 (221-291)||(16434721-16434791)
chr6 (221-258)||(2913123-2913160)
chr6 (218-258)||(8796275-8796315)
[»] chr2 (36 HSPs)
chr2 (223-291)||(14372077-14372145)
chr2 (223-291)||(23671376-23671444)
chr2 (226-291)||(14707727-14707792)
chr2 (218-291)||(42038518-42038591)
chr2 (223-291)||(18718239-18718307)
chr2 (223-291)||(34826912-34826980)
chr2 (223-291)||(40425442-40425510)
chr2 (223-291)||(41172950-41173018)
chr2 (223-291)||(3987425-3987493)
chr2 (215-291)||(20517411-20517487)
chr2 (216-291)||(44330377-44330452)
chr2 (222-291)||(44283472-44283541)
chr2 (223-291)||(4045426-4045494)
chr2 (223-291)||(7443084-7443152)
chr2 (223-291)||(16942004-16942072)
chr2 (223-291)||(17012669-17012737)
chr2 (223-291)||(27559575-27559643)
chr2 (224-291)||(41463710-41463777)
chr2 (230-291)||(38588082-38588143)
chr2 (223-291)||(30708728-30708796)
chr2 (223-291)||(32776093-32776161)
chr2 (238-291)||(36199144-36199197)
chr2 (223-291)||(9877276-9877344)
chr2 (219-291)||(40598124-40598196)
chr2 (230-291)||(5030464-5030525)
chr2 (223-291)||(38963519-38963587)
chr2 (220-257)||(20917726-20917763)
chr2 (223-291)||(4045850-4045918)
chr2 (223-258)||(14707535-14707570)
chr2 (223-258)||(18718465-18718500)
chr2 (223-258)||(23671602-23671637)
chr2 (223-258)||(40425249-40425284)
chr2 (245-291)||(4083229-4083275)
chr2 (225-258)||(44283281-44283314)
chr2 (220-260)||(20682866-20682906)
chr2 (222-258)||(27559801-27559837)
[»] scaffold0051 (1 HSPs)
scaffold0051 (221-291)||(41410-41480)
[»] chr3 (44 HSPs)
chr3 (213-291)||(43137841-43137919)
chr3 (218-291)||(7460013-7460086)
chr3 (223-291)||(1327311-1327379)
chr3 (223-291)||(8559198-8559266)
chr3 (223-291)||(18659052-18659120)
chr3 (223-291)||(54840321-54840389)
chr3 (220-291)||(21906993-21907064)
chr3 (222-289)||(37832899-37832966)
chr3 (221-291)||(27848950-27849020)
chr3 (221-291)||(29728291-29728361)
chr3 (217-291)||(38492046-38492120)
chr3 (221-291)||(45167297-45167367)
chr3 (230-291)||(38833671-38833732)
chr3 (222-291)||(48707036-48707105)
chr3 (223-291)||(34827322-34827390)
chr3 (223-291)||(52668678-52668746)
chr3 (232-291)||(51062399-51062458)
chr3 (228-291)||(51392485-51392548)
chr3 (226-291)||(10571337-10571402)
chr3 (223-291)||(46483551-46483619)
chr3 (223-291)||(15503025-15503093)
chr3 (219-291)||(32951329-32951401)
chr3 (223-291)||(49057856-49057924)
chr3 (223-291)||(53066375-53066442)
chr3 (222-291)||(25097380-25097449)
chr3 (223-291)||(28690516-28690584)
chr3 (217-291)||(39435228-39435302)
chr3 (223-291)||(3547613-3547681)
chr3 (219-291)||(4238813-4238885)
chr3 (219-291)||(17052860-17052932)
chr3 (210-258)||(38833889-38833937)
chr3 (245-291)||(9145524-9145570)
chr3 (221-291)||(52550809-52550879)
chr3 (221-258)||(8559003-8559040)
chr3 (234-291)||(32285369-32285426)
chr3 (219-291)||(10435130-10435202)
chr3 (251-291)||(45093748-45093788)
chr3 (223-258)||(7459820-7459855)
chr3 (223-258)||(10435345-10435380)
chr3 (223-258)||(18659278-18659313)
chr3 (223-258)||(34827479-34827514)
chr3 (251-290)||(35718049-35718088)
chr3 (218-255)||(37833129-37833166)
chr3 (216-252)||(54014230-54014266)
[»] scaffold0092 (1 HSPs)
scaffold0092 (223-291)||(44301-44369)
[»] scaffold0459 (1 HSPs)
scaffold0459 (220-291)||(12749-12820)
[»] scaffold0366 (2 HSPs)
scaffold0366 (220-291)||(10390-10461)
scaffold0366 (220-291)||(14056-14127)
[»] scaffold0027 (2 HSPs)
scaffold0027 (222-291)||(117320-117389)
scaffold0027 (215-258)||(117547-117590)
[»] scaffold0007 (2 HSPs)
scaffold0007 (220-288)||(15412-15480)
scaffold0007 (223-258)||(15216-15251)
[»] scaffold0340 (1 HSPs)
scaffold0340 (223-291)||(14345-14413)
[»] scaffold0111 (1 HSPs)
scaffold0111 (251-291)||(38553-38593)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 18781950 - 18781731
Alignment:
Q  7 agttttgcaaatgaaacacactcataaatatttatgttttggttttaccgaagtagttgttgnnnnnnncagaaacataaccaaacatgattgacatgat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  18781950 agttttgcaaatgaaacacactcataaatatttatgttttggttttaccgaagtagttgttgaaaaaaacagaaacataaccaaacatgattgacatgat 18781851  T
Q  107 aagggggagggagtggggtgagaaaatgaagagactgaataacacgctcggttttagaaatgtaaaagtagttactattcccttgtctcaagaacatcaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18781850 aagggggagggagtggggtgagaaaatgaagagactgaataacacgctcggttttggaaatgtaaaagtagttactattcccttgtctcaagaacatcaa 18781751  T
Q  207 tatcaaagataaatattact 226  Q
    ||||||||||||||| ||||    
T  18781750 tatcaaagataaatactact 18781731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 46212616 - 46212543
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46212616 aataatactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 46212543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 3901400 - 3901332
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3901400 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 3901332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 46803631 - 46803699
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46803631 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 46803699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 4264131 - 4264202
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4264131 tattactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 4264202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 3442611 - 3442537
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  3442611 aaatactactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatct 3442537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 5735271 - 5735339
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  5735271 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 5735339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 28166274 - 28166342
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  28166274 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 28166342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 45198601 - 45198533
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  45198601 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 45198533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 47579287 - 47579355
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  47579287 tactccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatct 47579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 6494586 - 6494656
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  6494586 attacttcctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatct 6494656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 5744344 - 5744276
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  5744344 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatct 5744276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 21859180 - 21859112
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  21859180 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatct 21859112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 21915043 - 21914975
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  21915043 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatct 21914975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 26205965 - 26205897
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  26205965 tactccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatct 26205897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 28151993 - 28152057
Alignment:
Q  225 ctccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28151993 ctccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttat 28152057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 49768447 - 49768513
Alignment:
Q  225 ctccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  49768447 ctccctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatct 49768513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 37688289 - 37688226
Alignment:
Q  228 cctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||    
T  37688289 cctccgtccctaaataaatgatctagatgactctgacacacataccaatgcatatgttttatct 37688226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 39786619 - 39786549
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  39786619 attactccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatct 39786549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 7739080 - 7739012
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||    
T  7739080 tactccatccgtccctaaataaatgacctagttgactccgacacacgtatcaatgcatatgttttatct 7739012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 18360234 - 18360166
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||||||||||||||||||  || ||||||||||||||||||||||    
T  18360234 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatct 18360166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 36602694 - 36602762
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||||||||||||||||||  || ||||||||||||||||||||||    
T  36602694 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatct 36602762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 55190975 - 55190907
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  55190975 tacttcctccgtccctcaatagatgacctagttgactctgacacacttaccaatgcatatgttttatct 55190907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 4209360 - 4209431
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||| || ||||||| ||||||||||||||    
T  4209360 tattactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatct 4209431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 23255934 - 23256001
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||| ||||||    
T  23255934 ttactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttat 23256001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 5123418 - 5123350
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| ||||| |||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  5123418 tactccctccatccctcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttatct 5123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 20678843 - 20678780
Alignment:
Q  228 cctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| |||||||||| ||||||||    
T  20678843 cctccgtccctaaataaatgatctagttgactctgacacatatatcaatgcatatattttatct 20678780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 1377027 - 1377100
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||| | ||| | |||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  1377027 aatactactcccttcatccttcaataaatgacgtagttgactatgacacacataccaatgcatatgttttatct 1377100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 39195743 - 39195674
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| ||||||| | || ||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  39195743 ttactcccttcgtcccttattagatgacctagttgactctgacacacatatcaatgcatattttttatct 39195674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 19652516 - 19652448
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||| |||| |||| ||||||||||| ||||||| ||||||| ||||||||||||||    
T  19652516 tacttcctccgtccctcaatatatgatctagttgactccgacatacgtaccaattcatatgttttatct 19652448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 19525976 - 19525907
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||   | ||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  19525976 ttactccctccgtcctatattaaatgacctagttgacttcgacacacgtaccaatgcatatgttttatct 19525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 19634109 - 19634041
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||||||| |||| |||| ||||||||||| |||| || ||||||| ||||||||||||||    
T  19634109 tactcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatct 19634041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 25644355 - 25644427
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| |||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  25644355 atattactccctctgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 25644427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 53568346 - 53568422
Alignment:
Q  215 ataaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||| ||||||||||  |  ||||| |||||||||||| |||| ||||| |||||||||||||||||||    
T  53568346 ataaatgttacttcctccgtcccatatcaaatgtcctagttgactccgacacacatatcaatgcatatgttttatct 53568422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 28152256 - 28152217
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28152256 atattactccctccgtcccttaataaatgacctagttgac 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 14958030 - 14958076
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||    
T  14958030 atgacctagttgactctgacacacataccaatgcatattttatatct 14958076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 19731404 - 19731358
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||    
T  19731404 atgacctagttgactccgacacacgtaccaatgcatatgttttatct 19731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 6923205 - 6923133
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||    | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  6923205 atattactccctccgtcttatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 6923133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 19170800 - 19170732
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||| |||| |||||||||||||||  |||| |  ||||||||||||| ||||||||    
T  19170800 tactcgctccgtccctcaatagatgacctagttgacttcgacacatgtaccaatgcatatattttatct 19170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 42187212 - 42187172
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  42187212 tagttgactctgacatacgtaccaatgcatatattttatct 42187172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 50033020 - 50033088
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||  | || ||||| |||||||||| |||| || ||||||||||||||||||||||    
T  50033020 tactctctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatct 50033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 3442344 - 3442379
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  3442344 tactccctccgtcccttaataaatgacctagttgac 3442379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 5735532 - 5735497
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  5735532 tactccctccgtcccttaataaatgacctagttgac 5735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 7738819 - 7738854
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  7738819 tactccctccgtcccttaataaatgacctagttgac 7738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 45198340 - 45198375
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  45198340 tactccctccgtcccttaataaatgacctagttgac 45198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 47579547 - 47579512
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  47579547 tactccctccgtcccttaataaatgacctagttgac 47579512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 19170538 - 19170567
Alignment:
Q  222 ttactccctccgtccctaaataaatgacct 251  Q
    ||||||||||||||||||||||||||||||    
T  19170538 ttactccctccgtccctaaataaatgacct 19170567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 20678586 - 20678623
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  20678586 attacttcctccgtcccttaataaatgacctagttgac 20678623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 54438155 - 54438192
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  54438155 attactccctccgtccctaaataagtgacctatttgac 54438192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 5744082 - 5744118
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  5744082 ttactccctccgtcccttaataaatgacccagttgac 5744118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 19525717 - 19525749
Alignment:
Q  226 tccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||| |||||||||||||||||||    
T  19525717 tccctccgtccctcaataaatgacctagttgac 19525749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 23603880 - 23603840
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||| || ||||||||||| ||||||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatct 23603840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 31486308 - 31486352
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||||||||||||||| ||| |||||| ||||||||| ||||||    
T  31486308 atgacctagttgactctaacacacatactaatgcatatcttttat 31486352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 39260391 - 39260324
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||||| |||| |||| |||||||||||||||| |  ||||||| ||||| ||||||||    
T  39260391 tactccctc-gtccctcaatagatgatctagttgactctgacacatgtaccaatacatatattttatct 39260324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 50035539 - 50035607
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||  | || |||| ||||||||||| |||| || || |||||||||||||||||||    
T  50035539 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatct 50035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 51737214 - 51737146
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||  | || || |||| |||||||| |||| || ||||||||||||||||||||||    
T  51737214 tactctctccgtcccatattagataaccttgttgactccgacacacgtaccaatgcatatgttttatct 51737146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 30289924 - 30289992
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30289924 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 30289992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 2805742 - 2805669
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2805742 aataatactccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatct 2805669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 29790941 - 29791010
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29790941 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 29791010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 38845200 - 38845268
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38845200 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 38845268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 38739654 - 38739725
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38739654 tattactccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 38739725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 45081810 - 45081880
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  45081810 attactccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatct 45081880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 40013651 - 40013719
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40013651 tactccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 40013719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 43066127 - 43066195
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43066127 tactacctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 43066195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 3293363 - 3293295
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  3293363 tactccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatct 3293295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 37709899 - 37709967
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  37709899 tactccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatct 37709967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 13138399 - 13138325
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13138399 aaatgttactccctctgtccctcaataaatgacctagttgactctgacacacgtaccaatgcatatgttttatct 13138325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 2986339 - 2986407
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  2986339 tactccctccgtctctgaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 2986407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 30380530 - 30380598
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||    
T  30380530 tactccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatct 30380598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 1581027 - 1580958
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || || |||||||||| ||||||||    
T  1581027 ttactccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatct 1580958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 8351141 - 8351073
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| ||| |||||||||||||||| || ||||| ||||||||||||||||    
T  8351141 tactccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatct 8351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 6470843 - 6470913
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  6470843 attactcccaccgtccctcaatatatgacctagttgactctgacacacgtatcaatgcatatgttttatct 6470913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 23248779 - 23248845
Alignment:
Q  225 ctccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||| |||||||||||||||||||||||| ||| | ||| |||||||||||||||||||    
T  23248779 ctccctccctccttaaataaatgacctagttgactctaacacatatatcaatgcatatgttttatct 23248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 39361128 - 39361191
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||| |||||| ||||||||||||| ||||   ||||||||| |||||||||||||||||||||||    
T  39361128 tactctctccgttcctaaataaatgatctag---actctgacacacataccaatgcatatgttttat 39361191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 23249115 - 23249078
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||| |||||||||||||||||||    
T  23249115 attactccctccgtcccttaataaatgacctagttgac 23249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 14847210 - 14847278
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| |||||||  ||| ||||||||||||| || |||| ||  |||||||||||||||||||||    
T  14847210 tactccctacgtccctcgatagatgacctagttgattccgacacacgcaccaatgcatatgttttatct 14847278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 18809272 - 18809344
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||| ||||  | ||||||| |||||||| |  |||| || ||||||||||||||||||||||    
T  18809272 atattactccctccatcccatattaaatgatctagttgagttcgacacacgtaccaatgcatatgttttatct 18809344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 2805476 - 2805511
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  2805476 tactccctccgtcccttaataaatgacctagttgac 2805511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 18809537 - 18809502
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  18809537 tactccctccgtccctcaataaatgacctagttgac 18809502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 30290185 - 30290150
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  30290185 tactccctccgtcccttaataaatgacctagttgac 30290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 31127805 - 31127840
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  31127805 tactccctccgtccctcaataaatgacctagttgac 31127840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 45082073 - 45082038
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  45082073 tactccctccgtcccttaataaatgacctagttgac 45082038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 45253749 - 45253816
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgac-atacataccaatgcatatgttttat 289  Q
    ||||||||| |||||| |||| |||| ||||||||||| ||| | || ||||||||||||||||||||    
T  45253749 tactccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttat 45253816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 886306 - 886260
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| |||||||| |||| || ||||||||||||||||||||||    
T  886306 atgacctggttgactccgacacacgtaccaatgcatatgttttatct 886260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 11854520 - 11854590
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||||||||||||||  | |||| || ||||||||||  |||| || ||||||||||||| ||||||    
T  11854520 atattactccctccgtcccatattaaacgatctagttgacttcgacacacgtaccaatgcatatattttat 11854590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 2986588 - 2986551
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  2986588 attactccctccgtcccttaataaatgacttagttgac 2986551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 29708822 - 29708785
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactc 260  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  29708822 tactccctccgtcccttaataagtgacctagttgactc 29708785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 3293100 - 3293136
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  3293100 ttactccctccgtcccttaataaatgacccagttgac 3293136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 14522641 - 14522605
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  14522641 ttactccctccgtcccttaatagatgacctagttgac 14522605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 14583715 - 14583759
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactct 261  Q
    ||||| |||||||||||||||| |||| ||||| |||||||||||    
T  14583715 aaatactactccctccgtcccttaatacatgacatagttgactct 14583759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 31128070 - 31127998
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| |||| |||||  | |||||||  |||||||||  |||| || ||||||||||||||||||||||    
T  31128070 atattacttcctctgtcccatattaaatgatttagttgacttcgacacacgtaccaatgcatatgttttatct 31127998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 44123673 - 44123741
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||  | || |||| ||||||||||| |||| || || |||||||||||||||||||    
T  44123673 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatct 44123741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 48265074 - 48265004
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48265074 attactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 48265004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 25531777 - 25531846
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25531777 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 25531846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 48219903 - 48219835
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48219903 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 48219835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 32988611 - 32988542
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32988611 ttactccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 32988542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 52378984 - 52379057
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  52378984 aatactactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 52379057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 39354525 - 39354457
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39354525 tactccctacgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 39354457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 50539260 - 50539328
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  50539260 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 50539328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 49805512 - 49805445
Alignment:
Q  224 actccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  49805512 actccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatct 49805445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 50876362 - 50876432
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  50876362 attactccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatct 50876432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 30529311 - 30529243
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  30529311 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatct 30529243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 38458729 - 38458797
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  38458729 tacttcctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatct 38458797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 3529176 - 3529244
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||| ||||| |||||||||||||||| || ||||||||||||||||||||||    
T  3529176 tactccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatct 3529244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 23569935 - 23569867
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  23569935 tactccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 23569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 42708504 - 42708570
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||| ||||| | |||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  42708504 tactccttccgttcttaaataaatgatttagttgactctgacacacataccaatgcatatgttttat 42708570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 37281087 - 37281160
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||  |||||| |||| ||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  37281087 aatagtactccctttgtccctcaatagatgacctagttgactctgacaaacatacaaatgcatgtgttttatct 37281160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 3898836 - 3898764
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  3898836 atattactccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatatgttttatct 3898764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 32565746 - 32565810
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgtttt 287  Q
    |||||||||||||| | |||| ||||| ||||||||||||||| || ||||||||||||||||||    
T  32565746 tactccctccgtccttcaatagatgacttagttgactctgacacacgtaccaatgcatatgtttt 32565810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 45235101 - 45235038
Alignment:
Q  228 cctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| || ||||| |||| ||||||||||||||| || ||||||||||||||||||||||    
T  45235101 cctccgtctctgaataagtgacttagttgactctgacacacgtaccaatgcatatgttttatct 45235038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 29161853 - 29161910
Alignment:
Q  234 tccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| ||||||||| |||||||||||||||| || ||||||| ||||||||||||||    
T  29161853 tccctcaataaatgatctagttgactctgacacacgtaccaattcatatgttttatct 29161910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 47222233 - 47222282
Alignment:
Q  242 taaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  47222233 taaatgacctagttgactccgacacacgtaccaatgcatatgttttatct 47222282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 4605002 - 4605066
Alignment:
Q  227 ccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||  ||| |||| ||||||||||| |||| || ||||||||||||||||||||||    
T  4605002 ccctccgtccctcgatagatgatctagttgactccgacacacgtaccaatgcatatgttttatct 4605066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 16265029 - 16265101
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  16265029 atattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 16265101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 16266158 - 16266230
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  16266158 atattattccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 16266230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 16751714 - 16751646
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||| ||  | || |||||||||||||||| |||| || ||||||||||||||||||||||    
T  16751714 tactccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatct 16751646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 26441633 - 26441705
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  26441633 atattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 26441705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 43680065 - 43680137
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  ||||  | ||||||||||||||||||||||    
T  43680065 atattactccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatatgttttatct 43680137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 24982347 - 24982417
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||||||||||||||| |  | ||||||| ||||||||||  |||| || ||||||||||||||||||||    
T  24982347 atattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttat 24982417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 30529047 - 30529085
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30529047 tattactccctccgtcccttaataaatgacctagttgac 30529085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 38738217 - 38738171
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||    
T  38738217 atgacctagttgactccgacacacgtaccaatgcatatgttttatct 38738171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 1849714 - 1849767
Alignment:
Q  238 taaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| ||| |||||||||||| ||| | |||||||||||||||||||||||    
T  1849714 taaataagtgatctagttgactctaacacatataccaatgcatatgttttatct 1849767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 48376158 - 48376226
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| || | | |||| ||||||||||| ||| ||||| || ||||||||||||||||||||||    
T  48376158 tactccctctgttcttcaatagatgacctagttaactttgacacacgtaccaatgcatatgttttatct 48376226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 50481278 - 50481346
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||  | || ||||| ||||||| || |||| || ||||||||||||||||||||||    
T  50481278 tactccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatct 50481346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 50876626 - 50876590
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| |||||||||||||||||||    
T  50876626 ttactccctccgtcccttaataaatgacctagttgac 50876590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 3898571 - 3898606
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  3898571 tactccctccgtccctcaataaatgacctagttgac 3898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 14075738 - 14075801
Alignment:
Q  226 tccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||||||||||  | || |||| | ||||||||| |||| |||||||||||||||||||||||    
T  14075738 tccctccgtcccatattagatgatcgagttgactccgacacacataccaatgcatatgttttat 14075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 16265294 - 16265259
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  16265294 tactccctccgtccctcaataaatgacctagttgac 16265259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 16266423 - 16266388
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  16266423 tactccctccgtccctcaataaatgacctagttgac 16266388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 25532039 - 25532004
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  25532039 tactccctccgtcccttaataaatgacctagttgac 25532004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 26441895 - 26441860
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  26441895 tactccctccgtccctcaataaatgacctagttgac 26441860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 31971631 - 31971580
Alignment:
Q  240 aataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||| |||||||||||||||| |  ||||||||||||||||||||||    
T  31971631 aatagatgatctagttgactctgacacatgtaccaatgcatatgttttatct 31971580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 39354264 - 39354299
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  39354264 tactccctccgtcccttaataaatgacctagttgac 39354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 43680331 - 43680296
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  43680331 tactccctccgtccctcaataaatgacctagttgac 43680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 46862546 - 46862585
Alignment:
Q  213 agataaatattactccctccgtccctaaataaatgaccta 252  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  46862546 agataaatattactccctccgtccctgaataagtgaccta 46862585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 48264811 - 48264846
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  48264811 tactccctccgtcccttaataaatgacctagttgac 48264846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 41855525 - 41855566
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactc 260  Q
    |||||||||||||||||||| ||||||||||  |||||||||    
T  41855525 atattactccctccgtcccttaataaatgacacagttgactc 41855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 23569674 - 23569702
Alignment:
Q  223 tactccctccgtccctaaataaatgacct 251  Q
    |||||||||||||||||||||||||||||    
T  23569674 tactccctccgtccctaaataaatgacct 23569702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 23988578 - 23988647
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23988578 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 23988647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 32334905 - 32334833
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32334905 atattactccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 32334833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 35448258 - 35448190
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 35448190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 42148306 - 42148375
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  42148306 ttactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 42148375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 29627268 - 29627336
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29627268 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatct 29627336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 38697963 - 38698031
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38697963 tactccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatct 38698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 39894781 - 39894849
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  39894781 tactccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatct 39894849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 40512941 - 40512873
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  40512941 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 40512873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 5364421 - 5364488
Alignment:
Q  224 actccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  5364421 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 5364488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 32002275 - 32002207
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  32002275 tactccctccgtccttaaataaatgatctacttgactctgacatacataccaatgcatatgttttatct 32002207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 5213183 - 5213115
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  5213183 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatct 5213115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 37516143 - 37516212
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| || ||||||||||||||||||||||    
T  37516143 ttactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatct 37516212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 4925099 - 4925031
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| |||||||||||||| |||||| || ||||||||||||||||||||||    
T  4925099 tactccctccgtccctcaatagatgacctagttgaccctgacacacgtaccaatgcatatgttttatct 4925031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 30780014 - 30779938
Alignment:
Q  215 ataaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||| || ||||||| ||||||||||||||    
T  30780014 ataaatattactccctccgttcctcaatagatgacctagttgactccgacacacgtaccaatacatatgttttatct 30779938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 35290286 - 35290354
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||| ||||||||    
T  35290286 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatct 35290354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 37843842 - 37843770
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||| ||||| || ||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  37843842 aaataatactctcttcgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttat 37843770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 39036410 - 39036478
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| || |||| ||||| ||||||||||||||| || |||||||| |||||||||||||    
T  39036410 tactccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatct 39036478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 41411419 - 41411351
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||| |||||||||  |||| || ||||||||||||||||||||||    
T  41411419 tactccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatct 41411351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 16954690 - 16954749
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatat 282  Q
    |||||||||||||||| |||| ||||| ||||||||||||||| || |||||||||||||    
T  16954690 tactccctccgtccctcaatagatgacttagttgactctgacacacgtaccaatgcatat 16954749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 1830653 - 1830722
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |||| ||||| |||||||||  |||| |  ||||||||||||||||||||||    
T  1830653 ttactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatct 1830722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 14475488 - 14475427
Alignment:
Q  230 tccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||| |||||||||||||||| |||| || ||| ||||||||||||||||||    
T  14475488 tccgtcccttaatagatgacctagttgactccgacacacgtacaaatgcatatgttttatct 14475427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 43517314 - 43517253
Alignment:
Q  230 tccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||| |||| ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  43517314 tccgcccctcaatagatgacctagttgactctgacacacgtactaatgcatatgttttatct 43517253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 970134 - 970206
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  970134 atattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 39405760 - 39405832
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  || | || ||||||||||||||||||||||    
T  39405760 atattactccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatct 39405832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 40316121 - 40316189
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||| |||||||||  |||| |  ||||||||||||||||||||||    
T  40316121 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatct 40316189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 43067225 - 43067297
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  43067225 atattacttcctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 43067297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 4300097 - 4300025
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| |||||||| |  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  4300097 atattacttcctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 4300025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 16048079 - 16048151
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||||||||  |  |||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  16048079 atattactctctccgtcccatatcaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 16048151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 22613974 - 22613902
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||| ||||||    ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  22613974 atattactcccttcgtcccatgttaaatgatctagttgacttagacacacgtaccaatgcatatgttttatct 22613902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 37304406 - 37304366
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctga 263  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  37304406 tactccctccgtccctgaataagtgacctagttgactctga 37304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 970399 - 970364
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  970399 tactccctccgtccctcaataaatgacctagttgac 970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 4299833 - 4299868
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  4299833 tactccctccgtccctcaataaatgacctagttgac 4299868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 22613709 - 22613744
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  22613709 tactccctccgtccctcaataaatgacctagttgac 22613744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 29627529 - 29627494
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||||||||||| |||||||    
T  29627529 tactccctccgtccctaaataaatgacccagttgac 29627494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 35447997 - 35448032
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  35447997 tactccctccgtcccttaataaatgacctagttgac 35448032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 38698228 - 38698189
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  38698228 atattactccctccgtcccttaataaatgacttagttgac 38698189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 42148568 - 42148533
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  42148568 tactccctccgtcccttaataaatgacctagttgac 42148533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 19868918 - 19868872
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatctctgcta 297  Q
    |||||||||| |||| || |||||||||||||||||||||| |||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgcta 19868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 1098446 - 1098401
Alignment:
Q  213 agataaatattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||| ||||||||||| || || |||||||||||||    
T  1098446 agataaatattacttcctccgtcccttaacaagtgacctagttgac 1098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 19889678 - 19889722
Alignment:
Q  247 gacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||| || | || ||||||||||||||||||||||    
T  19889678 gacctagttgactccgatacacgtaccaatgcatatgttttatct 19889722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 36819696 - 36819764
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36819696 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 36819764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 19072766 - 19072837
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19072766 tattactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatct 19072837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 47080979 - 47081048
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  47080979 ttactccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatct 47081048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 2400285 - 2400353
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  2400285 tactccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatct 2400353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 28185669 - 28185601
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28185669 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatct 28185601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 42086899 - 42086831
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42086899 tactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 42086831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 47713763 - 47713695
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  47713763 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 47713695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 47713840 - 47713774
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47713840 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttat 47713774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 31466619 - 31466551
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  31466619 tactccctccgtccctaaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatct 31466551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 37951206 - 37951138
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  37951206 tactccctccgtccataaataaatgacctagttgactctgacgcacataccaatgcatatgttttatct 37951138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 44479981 - 44479913
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44479981 tacttcctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 44479913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 32619203 - 32619137
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  32619203 tactccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttat 32619137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 36905524 - 36905594
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||    
T  36905524 attactccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatct 36905594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 36859469 - 36859401
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  36859469 tactccctccgttcctaaataaatgacctaattgactctaacacacataccaatgcatatgttttatct 36859401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 23474230 - 23474162
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||    
T  23474230 tactccttccgtccctaaataagtgacctagttgactctgacacacgtatcaatgcatatgttttatct 23474162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 31110625 - 31110690
Alignment:
Q  224 actccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  31110625 actccctccgtccctaaataaatgacctagttgactctgac--acatctcaatgcatatgttttatct 31110690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 4612348 - 4612282
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  4612348 tactccctacgtccctaaataaatgacccagttgactctgacacaaataccaatgcatatattttat 4612282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 42834553 - 42834485
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| |||||||||||||||| |||||| ||| | ||||||||||| |||||||||||||    
T  42834553 tactccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatct 42834485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 10464380 - 10464308
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | |||||||  ||||||||| ||||| || ||||||||||||||||||||||    
T  10464380 atattactccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatatgttttatct 10464308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 21392018 - 21392086
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||| | |||| |||| |||||||||||||||| || ||||||||||||||||||||||    
T  21392018 tactccctctgtccttcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatct 21392086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 37231829 - 37231757
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  37231829 atattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 37231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 34478002 - 34478043
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  34478002 aaatattactccctccgtccctcaataaatgacctagttgac 34478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 34478272 - 34478204
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||  | ||||| ||||||||||||  |||| || ||||||||||||||||||||||    
T  34478272 tactccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatct 34478204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 35501012 - 35500940
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| |||||| |||  |||| || ||||||||||||||||||||||    
T  35501012 atattactccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatatgttttatct 35500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 36819961 - 36819922
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  36819961 atattactccctccgtcccttaataaatgacctagttgac 36819922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 47537932 - 47537991
Alignment:
Q  232 cgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| ||||||||| ||| |||| ||||| |||| ||||||||||||||||||||||    
T  47537932 cgtccctcaataaatgatctaattgattctgatatacgtaccaatgcatatgttttatct 47537991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 4033297 - 4033359
Alignment:
Q  229 ctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| | || |||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  4033297 ctccgtcccttattagatgatctagttgactctgacacacatatcaatgcatattttttatct 4033359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 31466355 - 31466393
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  31466355 tattactccctccgtcccttaataaatgacctagttgac 31466393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 10464115 - 10464150
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  10464115 tactccctccgtccctcaataaatgacctagttgac 10464150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 33613238 - 33613281
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgtttta 288  Q
    |||||||||||||||| ||||  |||||||||||||||||||||    
T  33613238 atgacctagttgactccgacacgcataccaatgcatatgtttta 33613281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 36644000 - 36643965
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  36644000 tactccctccgtccctcaataaatgacctagttgac 36643965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 36905787 - 36905752
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||||||||||||| |||||||    
T  36905787 tactccctccgtccctaaataaatgacccagttgac 36905752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 37950945 - 37950980
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  37950945 tactccctccgtcccttaataaatgacctagttgac 37950980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 47081241 - 47081206
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  47081241 tactccctccgtcccttaataaatgacctagttgac 47081206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 38198503 - 38198549
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| | ||||| |||||||||| ||||||||    
T  38198503 atgacctagttgactctgatacacatatcaatgcatattttttatct 38198549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 31497965 - 31497896
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| |||||  | || || ||||||||||||| |||| |||||| ||| ||||||||||||||    
T  31497965 ttactccctcggtcccatattagataacctagttgactccgacacacatactaatacatatgttttatct 31497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 36643158 - 36643230
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||| ||||||  | ||||||| ||| ||||||  |||| || ||||||||||||||||||||||    
T  36643158 atattacttccttcgtcccatattaaatgatctaattgacttcgacacacgtaccaatgcatatgttttatct 36643230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 48531326 - 48531390
Alignment:
Q  227 ccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||| |||| ||||  ||||||||||||||| || || |||||||||| ||||||||    
T  48531326 ccctccgttcctcaatagatgatttagttgactctgacacacgtatcaatgcatatattttatct 48531390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 643692 - 643624
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  643692 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 11114563 - 11114633
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  11114563 attactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatct 11114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 31854816 - 31854886
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  31854816 attactccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatct 31854886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 20662323 - 20662252
Alignment:
Q  221 attactccctccgtccct-aaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20662323 attacttcctccgtccctcaaataaatgacctagttgcctctgacatacataccaatgcatatgttttatct 20662252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 22020269 - 22020344
Alignment:
Q  216 taaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| |||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22020269 taaatactactccttccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 22020344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 24150741 - 24150809
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24150741 tactccatccgttcctaaataaatgacctagttgactctgacacacataccaatgcatatattttatct 24150809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 8796047 - 8796118
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||    
T  8796047 tattactcactccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatct 8796118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 18991904 - 18991970
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  18991904 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttat 18991970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 29403638 - 29403712
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||| |||||||| | |||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  29403638 aaatattactctctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatct 29403712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 30237165 - 30237229
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgtttt 287  Q
    |||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||    
T  30237165 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgtttt 30237229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 33121542 - 33121610
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  33121542 tactccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatct 33121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 7098133 - 7098066
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||    || |||||||||||||||| |||||||||||||||||||||||||    
T  7098133 tattactccctccgtccctaaat----gatctagttgactctgacacacataccaatgcatatgttttatct 7098066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 25435406 - 25435479
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  25435406 aaataatactccctccgttcctcaataaatgatctagttgact-tgacacacataccaatgcatatgttttatct 25435479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 13207217 - 13207146
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||||||||   | || ||||||||||||||||||||| || ||||||||||||||||||||||    
T  13207217 tattactctctccgtcctacattagatgacctagttgactctgacacacgtaccaatgcatatgttttatct 13207146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 29986394 - 29986351
Alignment:
Q  248 acctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  29986394 acctagttgactctgacacacataccaatgcatatgttttatct 29986351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 20662058 - 20662094
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20662058 ttactccctccgtcccttaataaatgacctagttgac 20662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 18992168 - 18992129
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  18992168 atattactcgctccgtcccttaataaatgacctagttgac 18992129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 29979024 - 29979059
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  29979024 tactccctccgtcccttaataaatgacctagttgac 29979059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 30237436 - 30237393
Alignment:
Q  215 ataaatattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||    
T  30237436 ataaatattactcccttcgtcccttaataaatgacatagttgac 30237393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 16434791 - 16434721
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||  | || |||| ||||||||||| ||||  ||||||||||||||| | ||||||    
T  16434791 attactccctccgtcccatattagatgaactagttgactcagacactcataccaatgcatatttcttatct 16434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 2913160 - 2913123
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  2913160 attactccctccgtcccttaataagtgacctagttgac 2913123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 8796315 - 8796275
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||| |||||||||||||||| ||||||||||| |||||||    
T  8796315 aataatactccctccgtcccttaataaatgacccagttgac 8796275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 14372077 - 14372145
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14372077 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 14372145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 23671376 - 23671444
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23671376 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 23671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 14707792 - 14707727
Alignment:
Q  226 tccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14707792 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 14707727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 42038518 - 42038591
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  42038518 aataatactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 42038591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 18718239 - 18718307
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18718239 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatct 18718307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 34826912 - 34826980
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  34826912 tactccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatct 34826980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 40425510 - 40425442
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40425510 tactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatct 40425442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 41173018 - 41172950
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  41173018 tactccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatct 41172950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 3987493 - 3987425
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  3987493 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatct 3987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 20517411 - 20517487
Alignment:
Q  215 ataaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||| |||||||||||||||||||||||||    
T  20517411 ataaataatactccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatct 20517487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 44330377 - 44330452
Alignment:
Q  216 taaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| |||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44330377 taaatactactccttccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 44330452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 44283541 - 44283472
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  44283541 ttactccctccgtccttaaataaatgacctagttgattctgacacacataccaatgcatatattttatct 44283472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 4045494 - 4045426
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||||    
T  4045494 tactccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatct 4045426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 7443152 - 7443084
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  7443152 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatct 7443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 16942072 - 16942004
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  16942072 tacttcctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 16942004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 17012737 - 17012669
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  17012737 tacttcctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 17012669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 27559575 - 27559643
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||||||||||    
T  27559575 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatct 27559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 41463777 - 41463710
Alignment:
Q  224 actccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  41463777 actccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatct 41463710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 38588143 - 38588082
Alignment:
Q  230 tccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  38588143 tccgtccctaaataaatgatctagttgactctgatacacataccaatgcatatgttttatct 38588082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 30708728 - 30708796
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| || ||||| |||||||||||||| ||||| || ||||||||||||||||||||||    
T  30708728 tactccctccgtctctgaataagtgacctagttgactttgacacacgtaccaatgcatatgttttatct 30708796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 32776161 - 32776093
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| |||||||||||||||| || | || ||||||||||||||||||||||    
T  32776161 tactccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatct 32776093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 36199197 - 36199144
Alignment:
Q  238 taaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  36199197 taaataaatgatctagttgactctgacacacatactaatgcatatgttttatct 36199144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 9877344 - 9877276
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||||||||||||||||||| || |   ||||||||||||||||||    
T  9877344 tactccctccgtccctcaatagatgacctagttgactctgacacacgtgtgaatgcatatgttttatct 9877276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 40598124 - 40598196
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  40598124 atattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 40598196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 5030525 - 5030464
Alignment:
Q  230 tccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| | |||| ||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  5030525 tccgtccgttaatagatgacctagttgactttgacacacataccaatgcatattttttatct 5030464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 38963519 - 38963587
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||| ||| |||| ||||||||||| |||  |||| || ||||||||||||||||||||||    
T  38963519 tactccctccgttccttaatagatgacctagttaacttcgacacacgtaccaatgcatatgttttatct 38963587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 20917726 - 20917763
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttga 257  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20917726 tattactccctccgtcccttaataaatgacctagttga 20917763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 4045850 - 4045918
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| | ||| |||| ||||  ||||||| |||||||||| ||| ||||||||||||||||||    
T  4045850 tactccctccattcctcaatagatgatttagttgattctgacatacgtactaatgcatatgttttatct 4045918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 14707535 - 14707570
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  14707535 tactccctccgtcccttaataaatgacctagttgac 14707570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 18718500 - 18718465
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  18718500 tactccctccgtcccttaataaatgacctagttgac 18718465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 23671637 - 23671602
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  23671637 tactccctccgtcccttaataaatgacctagttgac 23671602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 40425249 - 40425284
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  40425249 tactccctccgtcccttaataaatgacctagttgac 40425284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 4083229 - 4083275
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||| |||| ||||| |||||||||||||||||||    
T  4083229 atgagctagttgactccgacacacatatcaatgcatatgttttatct 4083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 44283281 - 44283314
Alignment:
Q  225 ctccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||| |||||||||||||||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgac 44283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 20682906 - 20682866
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactc 260  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  20682906 tattactccctccgtcccttaataaatgacacagttgactc 20682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 27559837 - 27559801
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  27559837 ttactccctccgtcccttaataaatgacccagttgac 27559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 41480 - 41410
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41480 attactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 41410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 43137841 - 43137919
Alignment:
Q  213 agataaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  43137841 agataattaatactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 43137919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 7460086 - 7460013
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7460086 aatactacttcctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 7460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 1327311 - 1327379
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  1327311 tactccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatct 1327379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 8559266 - 8559198
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8559266 tactccatccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 8559198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 18659052 - 18659120
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  18659052 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 18659120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 54840389 - 54840321
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54840389 tactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 54840321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 21906993 - 21907064
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  21906993 tattactccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatct 21907064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 37832899 - 37832966
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttat 289  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37832899 ttactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttat 37832966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 27848950 - 27849020
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  27848950 attactccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatct 27849020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 29728361 - 29728291
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  29728361 attactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatct 29728291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 38492046 - 38492120
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  38492046 aaatagtactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatct 38492120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 45167297 - 45167367
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45167297 attactccatccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatct 45167367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 38833671 - 38833732
Alignment:
Q  230 tccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38833671 tccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 38833732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 48707105 - 48707036
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||    
T  48707105 ttactccctccgtccctaaataagtgatttagttgattctgacatacataccaatgcatatgttttatct 48707036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 34827322 - 34827390
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  34827322 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatct 34827390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 52668746 - 52668678
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||    
T  52668746 tactccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattttatct 52668678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 51062399 - 51062458
Alignment:
Q  232 cgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  51062399 cgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatct 51062458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 51392548 - 51392485
Alignment:
Q  228 cctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  51392548 cctctgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatct 51392485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 10571402 - 10571337
Alignment:
Q  226 tccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10571402 tccctccgtccctcgataaatgacctagttgactctgacacacataccaatacatatgttttatct 10571337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 46483551 - 46483619
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  46483551 tactccatccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatct 46483619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 15503025 - 15503093
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| |||||||| ||||||| ||||||| || |||||||||||||||||||    
T  15503025 tactccctccgtccctcaatagatgacctaattgactccgacatacgtatcaatgcatatgttttatct 15503093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 32951401 - 32951329
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||  | ||||||| ||||||||||  |||| |||||||||||||||||||||||||    
T  32951401 atattactccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatatgttttatct 32951329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 49057856 - 49057924
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||| ||||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  49057856 tacttcctccgtccctcaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatct 49057924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 53066375 - 53066442
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| ||||| ||||||||||||||| || ||||||||||||||||||||||    
T  53066375 tactccctccgtccctcaatagatgac-tagttgactctgacacacttaccaatgcatatgttttatct 53066442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 25097449 - 25097380
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| ||| |||| ||||| ||||||||||| ||| || ||||||||||||||||||||||    
T  25097449 ttactccctccgtacctcaatagatgacttagttgactctaacacacgtaccaatgcatatgttttatct 25097380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 28690516 - 28690584
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||| |  | || |||||||||||||||| |||| |||||||||||||||||||||||||    
T  28690516 tactccctccgtcacatattagatgacctagttgactccgacacacataccaatgcatatgttttatct 28690584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 39435302 - 39435228
Alignment:
Q  217 aaatattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||| ||||||||||||||||| | || ||||||||||||| ||||||| | |||||||| ||||| ||||||||    
T  39435302 aaattttactccctccgtcccttattagatgacctagttgattctgacacatataccaatacatattttttatct 39435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 3547681 - 3547613
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||  | || |||||||| ||||||| |||| || ||||||||||||||||||||||    
T  3547681 tactccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatct 3547613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 4238885 - 4238813
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| ||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  4238885 atattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 4238813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 17052860 - 17052932
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||| |  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  17052860 atattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 17052932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 38833937 - 38833889
Alignment:
Q  210 caaagataaatattactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  38833937 caaagataaataatactccctccgtcccttaataaatgacccagttgac 38833889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 9145524 - 9145570
Alignment:
Q  245 atgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||    
T  9145524 atgacctagttgactccgacacacgtaccaatgcatatgttttatct 9145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 52550879 - 52550809
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||| |||||||||  | || ||||| |||||||||| ||||||| ||| ||||||||||||||||||    
T  52550879 attactctctccgtcccatattagatgacttagttgactccgacatacgtactaatgcatatgttttatct 52550809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 8559003 - 8559040
Alignment:
Q  221 attactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8559003 attactccctccgtcccttaataaatgacctagttgac 8559040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 32285426 - 32285369
Alignment:
Q  234 tccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||| |||| | ||||||||||||||||||| || ||||||| ||||||||||||||    
T  32285426 tccctcaatagacgacctagttgactctgacacacgtaccaatacatatgttttatct 32285369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 10435130 - 10435202
Alignment:
Q  219 atattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||  ||||||||  | ||||||| ||||||||||  |||| || ||||||||||||||||||||||    
T  10435130 atattactctatccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatct 10435202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 45093748 - 45093788
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  45093748 tagttgactctgacacacgtaccaatgcatatgttttatct 45093788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 7459820 - 7459855
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  7459820 tactccctccgtcccttaataaatgacctagttgac 7459855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 10435380 - 10435345
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  10435380 tactccctccgtccctcaataaatgacctagttgac 10435345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 18659313 - 18659278
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  18659313 tactccctccgtcccttaataaatgacctagttgac 18659278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 34827514 - 34827479
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  34827514 tactccctccgtcccttaataaatgacctagttgac 34827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 35718088 - 35718049
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatc 290  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  35718088 tagttgactctgacacacgtaccaatgcatatgttttatc 35718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 37833166 - 37833129
Alignment:
Q  218 aatattactccctccgtccctaaataaatgacctagtt 255  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  37833166 aataatactccctccgtcccttaataaatgacctagtt 37833129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 54014230 - 54014266
Alignment:
Q  216 taaatattactccctccgtccctaaataaatgaccta 252  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  54014230 taaatattactccctccgtccctgaataagtgaccta 54014266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 44369 - 44301
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  44369 tactccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatct 44301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 12749 - 12820
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  12749 tattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatct 12820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 10390 - 10461
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  10390 tattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatct 10461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 14056 - 14127
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||    
T  14056 tattactccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatct 14127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 117320 - 117389
Alignment:
Q  222 ttactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  117320 ttactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatct 117389  T

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Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 117590 - 117547
Alignment:
Q  215 ataaatattactccctccgtccctaaataaatgacctagttgac 258  Q
    ||||||| || ||||||||||||| |||||||||||||||||||    
T  117590 ataaataatattccctccgtcccttaataaatgacctagttgac 117547  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 15480 - 15412
Alignment:
Q  220 tattactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgtttta 288  Q
    |||||||||||| |||||| ||||| |||||||||||||||| ||| || |||||||||||||| ||||    
T  15480 tattactccctcggtccctgaataactgacctagttgactctaacacacgtaccaatgcatatgattta 15412  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 15216 - 15251
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgac 258  Q
    |||||||||||||||| |||||||||||||||||||    
T  15216 tactccctccgtcccttaataaatgacctagttgac 15251  T

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Target: scaffold0340 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 14345 - 14413
Alignment:
Q  223 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatct 291  Q
    ||||||||| |||||| ||||||| | |||||||| || ||||||| ||| ||| ||||||||||||||    
T  14345 tactccctcggtccctcaataaataatctagttgattccgacatacttactaatacatatgttttatct 14413  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 38593 - 38553
Alignment:
Q  251 tagttgactctgacatacataccaatgcatatgttttatct 291  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  38593 tagttgacttcgacatacgtaccaatgcatatgttttatct 38553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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