View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9514_10 (Length: 318)
Name: NF9514_10
Description: NF9514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9514_10 |
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Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 50396526 - 50396235
Alignment:
| Q |
25 |
caggtgacatgcatgcatatgataaatgttgcgacaacttgacttgagcctttacctagcttgatattcaatttctcgaaactacttttcatataatgca |
124 |
Q |
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| T |
50396526 |
caggtgacatgcatgcatatgataaatgttgcgacaacttgacttgagcctttacctagcttgatattcaatttttcgaaattacttttcatataatgca |
50396427 |
T |
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| Q |
125 |
ggcatggggtgttctggagcagagggttgggaaccttttggctgctcgaagattgtttagatcctcgttgaatataaattctcagagttatgtgacatgg |
224 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50396426 |
ggcatggggtgttctggagcagagggttgggaatcttttggctgctcgaagattgtttagatcctcgttgaatataaattctcagagttatgtgacatgg |
50396327 |
T |
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| Q |
225 |
atgacatgggcatcactggaggaagatgaaggaaatcctgtgcgtgctgaagaaattcgtaacctttacttccagcaggtaactgatatgat |
316 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50396326 |
atgacatgggcatcactggaggaagatcaaggaaatcctgtgcgtgctgaagaaattcgtaacctttacttccagcaggtaactgatatgat |
50396235 |
T |
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