View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9525_8 (Length: 310)
Name: NF9525_8
Description: NF9525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9525_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 2 - 310
Target Start/End: Original strand, 40063327 - 40063635
Alignment:
| Q |
2 |
agaaaagaaaacagagtactctgtttatttatggattaaaaataaatgaacatgacgtgacggtagctaggttttacttacatatatatacactgacgca |
101 |
Q |
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| T |
40063327 |
agaaaagaaaacagagtactctgtttatttatggattaaaaataaatgaacatgacgtgacggtagctaggttttacttacatatatatacactgacgca |
40063426 |
T |
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| Q |
102 |
cgcaatgaatcaatggatgtgaccaacactactgaagcgtaaatgagaaatactatt-actattaatgagaatggtgaaggatgatatgaattgttatgt |
200 |
Q |
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| T |
40063427 |
cgcaatgaatcaatggatgtgaccaacactactgaagcgtaaatgagaaatactattaactattaatgagaatggtgaaggatgatatgaattgttatgt |
40063526 |
T |
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| Q |
201 |
gggtattaagatgatttatttgcaatagtggagtgagggggtgaaccgagaaaagtatgggatgaaaggatggtagagagtgaaggacatgtgaagggag |
300 |
Q |
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| T |
40063527 |
gggtattaagatggtttatttgcaatagtggagtga-ggggtgaacagagaaaagtatgggatgaaaggatggtagagagtgaaggacatgtgaagggag |
40063625 |
T |
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| Q |
301 |
tgggacagtt |
310 |
Q |
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| T |
40063626 |
tgggacagtt |
40063635 |
T |
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