View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9526_low_22 (Length: 252)
Name: NF9526_low_22
Description: NF9526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9526_low_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 39849073 - 39849314
Alignment:
| Q |
11 |
caaaggtgacagactcagactcttaggagcccgagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
110 |
Q |
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| T |
39849073 |
caaaggtgacagactcagactcttaggagccagagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
39849172 |
T |
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| Q |
111 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgctaaagcttttaaccttgataattcatgtatgcctgcctg |
210 |
Q |
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| T |
39849173 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgttaaagcttttaaccttgataattcatgtatgcctgcctg |
39849272 |
T |
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| Q |
211 |
tatgataagggtttactctcaccactctagcataaaatcgcc |
252 |
Q |
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| T |
39849273 |
tatgataagggtttactctcaccactctaccataaaatcgcc |
39849314 |
T |
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