View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9527_low_15 (Length: 387)

Name: NF9527_low_15
Description: NF9527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9527_low_15
NF9527_low_15
[»] chr6 (37 HSPs)
chr6 (1-371)||(10031671-10032041)
chr6 (177-286)||(7785681-7785790)
chr6 (193-285)||(2460104-2460196)
chr6 (236-304)||(2160933-2161001)
chr6 (182-301)||(2455819-2455938)
chr6 (190-296)||(281798-281904)
chr6 (181-290)||(8147007-8147115)
chr6 (241-302)||(27909639-27909700)
chr6 (233-288)||(3528825-3528880)
chr6 (190-285)||(32171333-32171428)
chr6 (177-304)||(33067164-33067291)
chr6 (177-223)||(3181006-3181052)
chr6 (192-282)||(9027606-9027696)
chr6 (181-254)||(27857414-27857487)
chr6 (198-282)||(7931684-7931768)
chr6 (177-285)||(32171492-32171600)
chr6 (260-307)||(2205610-2205657)
chr6 (185-216)||(2732192-2732223)
chr6 (181-272)||(3738107-3738198)
chr6 (249-295)||(4420658-4420704)
chr6 (181-215)||(7351612-7351646)
chr6 (193-287)||(30863269-30863363)
chr6 (241-307)||(31583682-31583748)
chr6 (182-272)||(34544086-34544176)
chr6 (312-345)||(30004842-30004875)
chr6 (182-263)||(32976025-32976106)
chr6 (177-222)||(33385617-33385662)
chr6 (304-341)||(33925696-33925733)
chr6 (182-271)||(34538160-34538249)
chr6 (191-223)||(2455700-2455732)
chr6 (181-221)||(4331013-4331053)
chr6 (183-231)||(5539266-5539314)
chr6 (234-282)||(6536975-6537023)
chr6 (193-285)||(7148691-7148783)
chr6 (184-216)||(10353705-10353737)
chr6 (189-217)||(11340574-11340602)
chr6 (249-293)||(17241261-17241305)
[»] chr7 (31 HSPs)
chr7 (6-128)||(33270571-33270693)
chr7 (182-306)||(25670528-25670652)
chr7 (190-272)||(33894665-33894747)
chr7 (177-303)||(39360030-39360156)
chr7 (241-304)||(24363602-24363665)
chr7 (177-272)||(36598293-36598388)
chr7 (184-282)||(45859471-45859568)
chr7 (177-222)||(25014037-25014082)
chr7 (182-283)||(34754752-34754853)
chr7 (193-281)||(20553132-20553220)
chr7 (181-303)||(7244687-7244810)
chr7 (182-253)||(8427070-8427141)
chr7 (182-285)||(22387838-22387941)
chr7 (184-215)||(25907581-25907612)
chr7 (181-303)||(33645901-33646023)
chr7 (236-307)||(35267365-35267436)
chr7 (186-285)||(46082061-46082160)
chr7 (177-303)||(46281079-46281203)
chr7 (251-301)||(25596042-25596092)
chr7 (249-299)||(28165102-28165152)
chr7 (177-215)||(29363603-29363641)
chr7 (182-216)||(30751613-30751647)
chr7 (258-304)||(32210273-32210319)
chr7 (247-297)||(39280982-39281032)
chr7 (182-284)||(48157062-48157164)
chr7 (182-283)||(1710757-1710857)
chr7 (182-295)||(27626065-27626178)
chr7 (186-263)||(28076601-28076678)
chr7 (312-348)||(992006-992042)
chr7 (182-218)||(39630158-39630194)
chr7 (176-216)||(42157343-42157383)
[»] chr4 (33 HSPs)
chr4 (177-304)||(2996579-2996706)
chr4 (182-303)||(28615530-28615652)
chr4 (202-303)||(23819096-23819197)
chr4 (182-283)||(33534111-33534212)
chr4 (193-285)||(27123305-27123397)
chr4 (194-285)||(9843207-9843298)
chr4 (177-283)||(28232572-28232678)
chr4 (184-303)||(21157775-21157894)
chr4 (182-303)||(18628495-18628606)
chr4 (177-307)||(19429710-19429842)
chr4 (194-282)||(6428046-6428134)
chr4 (249-301)||(40532603-40532655)
chr4 (247-303)||(53673665-53673721)
chr4 (182-216)||(50298609-50298643)
chr4 (183-216)||(22471368-22471401)
chr4 (248-284)||(3595636-3595672)
chr4 (251-303)||(17975380-17975432)
chr4 (182-222)||(22239494-22239534)
chr4 (181-217)||(22523773-22523809)
chr4 (199-303)||(27721724-27721828)
chr4 (182-285)||(47970321-47970424)
chr4 (247-294)||(5131257-5131304)
chr4 (251-297)||(2592320-2592366)
chr4 (233-303)||(4471175-4471245)
chr4 (184-221)||(1017117-1017154)
chr4 (199-304)||(4798525-4798630)
chr4 (251-296)||(14011248-14011293)
chr4 (182-223)||(18512457-18512498)
chr4 (236-301)||(19304935-19305000)
chr4 (181-285)||(6987682-6987786)
chr4 (177-217)||(30770982-30771022)
chr4 (181-217)||(32071956-32071992)
chr4 (249-301)||(47145971-47146023)
[»] chr5 (32 HSPs)
chr5 (177-307)||(37611152-37611282)
chr5 (177-307)||(37787882-37788012)
chr5 (181-304)||(7907887-7908011)
chr5 (182-294)||(12459943-12460055)
chr5 (192-303)||(36639529-36639640)
chr5 (241-303)||(33533540-33533602)
chr5 (182-307)||(11457102-11457226)
chr5 (182-307)||(34975367-34975492)
chr5 (183-307)||(12242653-12242777)
chr5 (182-301)||(14980519-14980637)
chr5 (202-304)||(37526161-37526263)
chr5 (213-303)||(41957424-41957514)
chr5 (234-303)||(32194073-32194142)
chr5 (189-296)||(4619721-4619828)
chr5 (182-285)||(10125660-10125763)
chr5 (182-304)||(10391347-10391470)
chr5 (202-285)||(37690598-37690681)
chr5 (199-273)||(10907415-10907489)
chr5 (181-303)||(29336637-29336759)
chr5 (250-296)||(38104867-38104913)
chr5 (181-222)||(1084080-1084121)
chr5 (182-271)||(11297138-11297227)
chr5 (247-296)||(12975361-12975409)
chr5 (182-223)||(25720359-25720400)
chr5 (207-296)||(35960427-35960516)
chr5 (247-303)||(7319015-7319071)
chr5 (249-340)||(12521495-12521589)
chr5 (200-272)||(16457573-16457645)
chr5 (236-304)||(18543193-18543260)
chr5 (247-303)||(18906349-18906405)
chr5 (255-303)||(26005012-26005060)
chr5 (259-303)||(36774726-36774770)
[»] chr3 (47 HSPs)
chr3 (193-303)||(37273141-37273251)
chr3 (182-283)||(43115083-43115184)
chr3 (183-285)||(24281072-24281174)
chr3 (180-285)||(26542562-26542667)
chr3 (185-272)||(1810015-1810102)
chr3 (182-301)||(22667413-22667531)
chr3 (182-301)||(22724052-22724170)
chr3 (236-307)||(37825125-37825196)
chr3 (182-273)||(50211773-50211863)
chr3 (241-340)||(49586937-49587042)
chr3 (197-297)||(11039296-11039396)
chr3 (194-254)||(25182941-25183001)
chr3 (183-303)||(30573857-30573977)
chr3 (198-285)||(14548679-14548766)
chr3 (182-216)||(21872237-21872271)
chr3 (181-303)||(27294353-27294475)
chr3 (184-307)||(52323838-52323963)
chr3 (179-284)||(20192545-20192650)
chr3 (233-298)||(36200108-36200173)
chr3 (205-301)||(21574499-21574595)
chr3 (193-269)||(34707449-34707525)
chr3 (182-217)||(20210870-20210905)
chr3 (242-293)||(21862177-21862228)
chr3 (247-302)||(25185993-25186048)
chr3 (233-280)||(29771868-29771915)
chr3 (178-217)||(37138375-37138414)
chr3 (233-280)||(42745068-42745115)
chr3 (213-303)||(1217773-1217863)
chr3 (182-280)||(26330265-26330363)
chr3 (181-223)||(30657373-30657415)
chr3 (262-303)||(8697664-8697705)
chr3 (262-303)||(9049551-9049592)
chr3 (183-304)||(36646325-36646446)
chr3 (184-273)||(37155038-37155127)
chr3 (184-273)||(37200393-37200482)
chr3 (182-303)||(41644387-41644508)
chr3 (181-214)||(44237513-44237546)
chr3 (203-288)||(50952355-50952440)
chr3 (241-297)||(2081084-2081140)
chr3 (247-303)||(2719475-2719531)
chr3 (219-271)||(3015822-3015874)
chr3 (312-348)||(16790186-16790222)
chr3 (247-303)||(23785262-23785318)
chr3 (250-306)||(23793588-23793644)
chr3 (182-242)||(24158458-24158518)
chr3 (183-223)||(47584537-47584577)
chr3 (181-272)||(50004690-50004782)
[»] chr2 (39 HSPs)
chr2 (177-304)||(35485923-35486050)
chr2 (250-300)||(18840806-18840856)
chr2 (233-301)||(34652029-34652097)
chr2 (177-280)||(39621981-39622084)
chr2 (181-304)||(43985215-43985338)
chr2 (241-303)||(16867746-16867808)
chr2 (177-307)||(43456644-43456774)
chr2 (190-303)||(7283003-7283116)
chr2 (182-277)||(25609829-25609924)
chr2 (193-300)||(41809198-41809305)
chr2 (183-269)||(787373-787459)
chr2 (233-303)||(1939325-1939395)
chr2 (177-295)||(9478314-9478432)
chr2 (193-307)||(12313126-12313240)
chr2 (249-303)||(35379025-35379079)
chr2 (177-231)||(42852639-42852693)
chr2 (219-309)||(43065429-43065519)
chr2 (182-303)||(43141878-43142000)
chr2 (195-284)||(9878637-9878726)
chr2 (190-263)||(44606060-44606133)
chr2 (251-303)||(3078651-3078703)
chr2 (193-269)||(13234547-13234623)
chr2 (236-307)||(36863621-36863692)
chr2 (179-217)||(13869047-13869085)
chr2 (182-216)||(22878192-22878226)
chr2 (182-296)||(33192216-33192329)
chr2 (183-285)||(40158743-40158845)
chr2 (194-303)||(8187407-8187516)
chr2 (195-272)||(14299586-14299663)
chr2 (228-293)||(14451038-14451103)
chr2 (177-222)||(17443545-17443590)
chr2 (242-283)||(25796202-25796243)
chr2 (182-250)||(1318296-1318363)
chr2 (181-285)||(16947051-16947154)
chr2 (181-285)||(17017716-17017819)
chr2 (305-333)||(27288330-27288358)
chr2 (182-254)||(28803472-28803544)
chr2 (192-284)||(38077025-38077117)
chr2 (296-340)||(41033032-41033076)
[»] chr1 (35 HSPs)
chr1 (177-280)||(4868430-4868532)
chr1 (181-296)||(32515382-32515497)
chr1 (182-304)||(12564441-12564563)
chr1 (182-296)||(31517682-31517796)
chr1 (182-303)||(27140485-27140606)
chr1 (181-288)||(4768770-4768877)
chr1 (186-301)||(6279408-6279523)
chr1 (182-272)||(15581292-15581382)
chr1 (241-303)||(35017583-35017645)
chr1 (210-294)||(30259456-30259540)
chr1 (236-297)||(28689448-28689509)
chr1 (190-282)||(3110019-3110111)
chr1 (177-273)||(15579519-15579615)
chr1 (177-217)||(24460338-24460378)
chr1 (199-286)||(6262044-6262131)
chr1 (185-309)||(26179471-26179596)
chr1 (184-215)||(28836989-28837020)
chr1 (236-303)||(34290243-34290310)
chr1 (233-296)||(46252675-46252738)
chr1 (233-307)||(29834898-29834972)
chr1 (177-215)||(33339436-33339474)
chr1 (185-223)||(43371836-43371874)
chr1 (236-301)||(12477283-12477348)
chr1 (192-285)||(26916226-26916319)
chr1 (182-215)||(28837295-28837328)
chr1 (177-222)||(34422111-34422156)
chr1 (193-286)||(43333705-43333798)
chr1 (247-304)||(47598428-47598485)
chr1 (251-303)||(4548728-4548780)
chr1 (234-286)||(5276317-5276369)
chr1 (249-301)||(14629975-14630027)
chr1 (248-284)||(33108630-33108666)
chr1 (182-282)||(38170632-38170732)
chr1 (184-216)||(40485717-40485749)
chr1 (194-262)||(42336663-42336731)
[»] scaffold0311 (1 HSPs)
scaffold0311 (182-273)||(10559-10650)
[»] chr8 (41 HSPs)
chr8 (202-301)||(30918122-30918220)
chr8 (182-303)||(43504758-43504879)
chr8 (193-272)||(2091801-2091880)
chr8 (192-307)||(33553243-33553358)
chr8 (182-304)||(7918388-7918510)
chr8 (186-280)||(13000370-13000464)
chr8 (181-223)||(25881356-25881398)
chr8 (206-271)||(779027-779092)
chr8 (181-282)||(6950350-6950451)
chr8 (182-283)||(9700028-9700129)
chr8 (182-303)||(11569399-11569520)
chr8 (182-262)||(1561325-1561405)
chr8 (183-303)||(28769282-28769402)
chr8 (177-216)||(8535992-8536031)
chr8 (181-307)||(13652218-13652345)
chr8 (181-307)||(13710861-13710988)
chr8 (177-211)||(26499815-26499849)
chr8 (183-221)||(37353115-37353153)
chr8 (257-307)||(39881769-39881819)
chr8 (181-303)||(44236764-44236886)
chr8 (182-303)||(778396-778517)
chr8 (234-303)||(4055610-4055679)
chr8 (184-216)||(2487952-2487984)
chr8 (181-273)||(30191082-30191174)
chr8 (249-301)||(42215091-42215143)
chr8 (182-273)||(4511065-4511156)
chr8 (236-303)||(20672757-20672824)
chr8 (234-285)||(25869260-25869311)
chr8 (190-333)||(43908650-43908792)
chr8 (177-223)||(14926919-14926965)
chr8 (182-216)||(24326125-24326159)
chr8 (181-303)||(30389106-30389228)
chr8 (266-341)||(40280253-40280332)
chr8 (250-304)||(41336655-41336709)
chr8 (177-222)||(2364397-2364442)
chr8 (248-301)||(6875275-6875328)
chr8 (194-283)||(41606857-41606946)
chr8 (182-271)||(43368642-43368731)
chr8 (183-303)||(11813048-11813168)
chr8 (192-272)||(27158073-27158153)
chr8 (199-283)||(31862520-31862603)
[»] scaffold0286 (1 HSPs)
scaffold0286 (236-304)||(16116-16184)
[»] scaffold0508 (1 HSPs)
scaffold0508 (307-340)||(9868-9901)
[»] scaffold0147 (1 HSPs)
scaffold0147 (233-294)||(12697-12758)
[»] scaffold0141 (1 HSPs)
scaffold0141 (181-242)||(9719-9780)
[»] scaffold0549 (2 HSPs)
scaffold0549 (189-217)||(1673-1701)
scaffold0549 (189-217)||(3763-3791)
[»] scaffold0019 (1 HSPs)
scaffold0019 (312-340)||(104232-104260)


Alignment Details
Target: chr6 (Bit Score: 355; Significance: 0; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 10032041 - 10031671
Alignment:
Q  1 atccaagacatggaaagtacatggcatgttgcttgatgtatcgcggcgatattgttccgaaagatgtcaatgttgctgtttcacatatcaagaaaatgag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10032041 atccaagacatggaaagtacatggcatgttgcttgatgtatcgcggcgatattgttccgaaagatgtcaatgttgctgtttcacatatcaagaaaatgag 10031942  T
Q  101 aacagttcaatttgttgactggtaattaactatacatcctttgaataatatcatgagatttacaatttggattgcatgaatttatctactgacataagca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10031941 aacagttcaatttgttgactggtaattaactatacatcctttgaataatatcatgaggtttacaatttggattgcatgaatttatctactgacataagca 10031842  T
Q  201 cttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaa 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10031841 cttgtgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaa 10031742  T
Q  301 acaattttaactttattttttgttatagaaataacttatatgtaagcagtaagcactttatatgataaatg 371  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10031741 acaattttaactttattttttgttatagaaataacttatacgtaagcactaagcactttatatgataaatg 10031671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 7785681 - 7785790
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    ||||||||||||||||||||||||||| || ||||| ||||| |||  |||  || || |||| ||||| || |||||||||||||| ||||||||| ||    
T  7785681 tgaatttatctactgacataagcacttttgggactgattgaaggagtttacagaaacagcttatgacatgtctataagttgttttcagcttatttccata 7785780  T
Q  277 agctctccaa 286  Q
    ||||||||||    
T  7785781 agctctccaa 7785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 2460104 - 2460196
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||| |||||||||||||||||| ||||| || | || ||||||| ||||| ||  ||||||||||||| ||||||||| |||||||||||    
T  2460104 cataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctcca 2460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 2160933 - 2161001
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| || ||||||||||||||  |||||||    
T  2160933 cttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaa 2161001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2455938 - 2455819
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||| | |||||||||||| |||| |||||  |||||| || | || ||||||| |||||  ||||||  | |||||| ||||||||| |||||||    
T  2455938 ttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctc 2455839  T
Q  282 tccaagacagcttataaaaa 301  Q
    ||||||| ||||||| ||||    
T  2455838 tccaagatagcttatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 281798 - 281904
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagac 289  Q
    ||||||||| |||||||||||||||||  |||||  | | || ||||||| ||||| || |||||||||||||| ||||||||| | ||||||| | ||     
T  281798 tgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggat 281897  T
Q  290 agcttat 296  Q
    |||||||    
T  281898 agcttat 281904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 8147007 - 8147115
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||| ||| |||||||| ||||||| ||||||||| ||||||| || |||| |||||||  |||||| |||||| | |||||| |||| | || ||||||    
T  8147007 tttacctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataacatatgcataagctattttcaacttact-ccataagct 8147105  T
Q  281 ctccaagaca 290  Q
    ||||||||||    
T  8147106 ctccaagaca 8147115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 27909639 - 27909700
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaac 302  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||  | |||||||||||||    
T  27909639 gacatgtccataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 3528880 - 3528825
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaaga 288  Q
    ||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||    
T  3528880 caacttatgacatgtccataacttgttttcatcttattttcataagctctccaaga 3528825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 32171333 - 32171428
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    ||||||||||||||| |||||||||||| ||||| || |||| || |||| ||||  |||| ||| | |||||| ||||||||| |||||| ||||    
T  32171333 tgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatcca 32171428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 33067291 - 33067164
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    ||||||||||||||||||||||||||||| |||||| |||  ||||| || |  | ||  ||| || || ||||||| | |||||||  |||||||   |    
T  33067291 tgaatttatctactgacataagcacttgtaagactgattgggagagcttatggcaacagtttaggaaatgtccataaatcgttttcagtttatttctaca 33067192  T
Q  277 agctctccaagacagcttataaaaacaa 304  Q
    |||||||||||| ||||||| |||||||    
T  33067191 agctctccaagatagcttatgaaaacaa 33067164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 3181006 - 3181052
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||    
T  3181006 tgaacttatctacagacataagcacttgtgagactatttgaaagagc 3181052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 9027696 - 9027606
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||||||| ||  || |||||||||||||| || | ||  |||||| ||||| ||||||||||||||||| ||||||| | ||||||||    
T  9027696 acataagcacgtgcaagtctgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 27857487 - 27857414
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataag 254  Q
    ||||||||||||||||  ||||||||| ||||||||  ||||| || |||| ||||||| ||||| ||||||||    
T  27857487 tttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataag 27857414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 7931684 - 7931768
Alignment:
Q  198 gcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||||||||||  |||  |||||| || |||| ||||||| ||||| | | ||||||||||||| ||||||||| ||||||||    
T  7931684 gcacttgtgagaccatttagaagagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctct 7931768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 32171600 - 32171492
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||| |||||||||||||| ||||||||||| |||  ||||| || | || ||||||| || |  ||||| |  |||||||| ||||||||| ||    
T  32171600 tgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttatttccata 32171501  T
Q  277 agctctcca 285  Q
    |||||||||    
T  32171500 agctctcca 32171492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 2205610 - 2205657
Alignment:
Q  260 ttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    |||| ||||||||| |||||||||||||| ||||||| ||||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaattt 2205657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 216
Target Start/End: Original strand, 2732192 - 2732223
Alignment:
Q  185 tctactgacataagcacttgtgagactgtttg 216  Q
    ||||||||||||||||||||||||||||||||    
T  2732192 tctactgacataagcacttgtgagactgtttg 2732223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 3738198 - 3738107
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||||||||  ||||||| ||||||||||||||||||||| | |  | || || |||| ||||| |||||||| || ||||| ||||||||    
T  3738198 tttatctactagcataagcccttgtgagactgtttgaaagatcttgtggaaacagcttatgacatgtccataagctgctttcaacttatttc 3738107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 4420704 - 4420658
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagctta 295  Q
    |||||| |||||||| ||||||||| |||||||||||||| ||||||    
T  4420704 cataagctgttttcagcttatttccataagctctccaagatagctta 4420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 7351612 - 7351646
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgttt 215  Q
    ||||||||||||||||||||||||||||| |||||    
T  7351612 tttatctactgacataagcacttgtgagattgttt 7351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 30863363 - 30863269
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaag 287  Q
    ||||| ||||||| ||||| ||||  ||||| || |||| ||||||| ||||| | ||||||||||||||| |||| |||  |||||||| ||||    
T  30863363 cataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgtacataagttgttttcagcttacttctataagctcttcaag 30863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 31583748 - 31583682
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    ||||| ||||||||||||||||| ||||||||| |||||| | |  || ||||||| ||||||||||    
T  31583748 gacatgtccataagttgttttcaacttatttccataagcttttcgggatagcttatgaaaacaattt 31583682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 34544086 - 34544176
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||||||| ||| |||||||||||| ||| ||||||||| | || |||| ||  ||| ||||| |||||||  | |||||||||||||||    
T  34544086 ttatctactaacacaagcacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccataaactattttcatcttatttc 34544176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 345
Target Start/End: Complemental strand, 30004875 - 30004842
Alignment:
Q  312 tttattttttgttatagaaataacttatatgtaa 345  Q
    ||||||||||||||||||||||||||||| ||||    
T  30004875 tttattttttgttatagaaataacttatacgtaa 30004842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 32976106 - 32976025
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttca 263  Q
    |||| ||||| |||||| ||||||||||||||||| |||||| ||   || || |||| ||||| |||||||| ||||||||    
T  32976106 ttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttca 32976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 33385662 - 33385617
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||    
T  33385662 tgaacttatctactgatataagcacttgtgaaactgtttggaagag 33385617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 33925733 - 33925696
Alignment:
Q  304 attttaactttattttttgttatagaaataacttatat 341  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  33925733 attttaactttatcttttgttatagaaatagcttatat 33925696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 34538160 - 34538249
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttattt 271  Q
    ||||||||| | |||||||||||||||||| ||||| ||| | ||  ||| || |||||||||| |||||||  | |||||| |||||||    
T  34538160 ttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttcagcttattt 34538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 2455732 - 2455700
Alignment:
Q  191 gacataagcacttgtgagactgtttgaaagagc 223  Q
    |||||||||| ||||||||||||||||||||||    
T  2455732 gacataagcatttgtgagactgtttgaaagagc 2455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 4331013 - 4331053
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaaga 221  Q
    |||||||| |||||||||||||||||||| ||||| |||||    
T  4331013 tttatctattgacataagcacttgtgagattgtttaaaaga 4331053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 5539266 - 5539314
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaa 231  Q
    ||||||| || ||||| |||||||||||||||||| ||||| |||||||    
T  5539266 tatctaccgatataagtacttgtgagactgtttgatagagcttacgaaa 5539314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 6537023 - 6536975
Alignment:
Q  234 aacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||| ||||| | ||||||||||||||| ||||||||| ||||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctct 6536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 7148783 - 7148691
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    ||||||||||||||||| ||||    ||||| |||| || ||||||| ||| | |||||||| | |||||| ||||||| | |||||||||||    
T  7148783 cataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctcca 7148691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 10353705 - 10353737
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttg 216  Q
    ||||||| |||||||||||||||||||||||||    
T  10353705 atctactaacataagcacttgtgagactgtttg 10353737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 11340574 - 11340602
Alignment:
Q  189 ctgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||||||||||||||||    
T  11340574 ctgacataagcacttgtgagactgtttga 11340602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 17241261 - 17241305
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagct 293  Q
    ||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  17241261 cataagttgttttcaacttatttccataaactctccaagatagct 17241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 33270571 - 33270693
Alignment:
Q  6 agacatggaaagtacatggcatgttgcttgatgtatcgcggcgatattgttccgaaagatgtcaatgttgctgtttcacatatcaagaaaatgagaacag 105  Q
    ||||| ||||||||||||||||| ||| | ||||||||||| ||| |||| || |||||||| ||||  ||||||||| ||||||| | || ||||||||    
T  33270571 agacacggaaagtacatggcatgctgcctcatgtatcgcggagatgttgtgcctaaagatgtaaatgcagctgtttcaaatatcaaaacaaagagaacag 33270670  T
Q  106 ttcaatttgttgactggtaatta 128  Q
    |||| ||||||||||||||||||    
T  33270671 ttcagtttgttgactggtaatta 33270693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 25670528 - 25670652
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| |||||||||| ||||||||||||||||| | | | || |||| ||||||| ||||| |  |||| ||||||||| ||||||| |  ||||||    
T  25670528 ttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctc 25670627  T
Q  282 tccaagacagcttataaaaacaatt 306  Q
    ||||||| |  ||||||||||||||    
T  25670628 tccaagatatgttataaaaacaatt 25670652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 33894747 - 33894665
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    |||||||||||||||||||||||||||  ||||| || |||| || | || ||||| ||||||||||||||||| ||||||||    
T  33894747 tgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttc 33894665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 303
Target Start/End: Complemental strand, 39360156 - 39360030
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| ||||||||||  ||||  ||| |||||||||||||| ||||  || | || ||||||| ||||||||||||||||| ||||| ||||||||  ||    
T  39360156 tgaacttatctactggaataattactcgtgagactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttcaata 39360057  T
Q  277 agctctccaagacagcttataaaaaca 303  Q
    ||||| ||| || ||||| | ||||||    
T  39360056 agctcgccaggatagcttttgaaaaca 39360030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 24363602 - 24363665
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    ||||| ||||||||||||||||| ||||||||| ||| ||||||| || ||||||| |||||||    
T  24363602 gacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaa 24363665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36598293 - 36598388
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    |||| ||| ||||||||||||||| |||||||| ||||||| ||||| || | || || |||| ||||| | |||||| |||||||| ||||||||    
T  36598293 tgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 45859471 - 45859568
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||| ||||| || |||||||||||||||| |||||| |||| || |||| || ||||| | ||| ||||||||||| ||||||||  ||||||||    
T  45859471 atctacttacataggctcttgtgagactgtttggaagagcttacggaaacaacatatgacatgttcat-agttgttttcagcttatttctataagctct 45859568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 25014082 - 25014037
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  25014082 tgaatttatctactgacacaagcacttgtaagactgtttgagagag 25014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 34754752 - 34754853
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| ||||| || ||||| ||||||||||||| ||||| || |||| || |||| ||||   | |||||||||||||| ||||||||| | |||||    
T  34754752 ttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgacaagcctataagttgttttcagcttatttccatcagctc 34754851  T
Q  282 tc 283  Q
    ||    
T  34754852 tc 34754853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 20553220 - 20553132
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||||||||||||||||||    ||||| || | || || |||||||||| | |||||||||||||||  |||||||| |||||||    
T  20553220 cataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 7244810 - 7244687
Alignment:
Q  181 tttatctactgacataagcacttgtgagact-gtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagc 279  Q
    ||||||||||| ||||| ||||| | ||| | ||||||||||||  | | || ||| ||| |||||   ||||||||||||||| ||||||| | |||||    
T  7244810 tttatctactgccataaacacttctaagatttgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagc 7244711  T
Q  280 tctccaagacagcttataaaaaca 303  Q
    ||||||| | ||||||| ||||||    
T  7244710 tctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 8427141 - 8427070
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataa 253  Q
    ||||||||| ||||||| |||||||||||||||||   ||||||| | || ||||||||||| | |||||||    
T  8427141 ttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaacttacgacgtgtccataa 8427070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 22387838 - 22387941
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| ||||||||||| ||| ||||||||||||||  ||||| || |||| ||||||| | ||| |  ||||  |||||| | ||||||||| |||||||    
T  22387838 ttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctc 22387937  T
Q  282 tcca 285  Q
    ||||    
T  22387938 tcca 22387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 25907581 - 25907612
Alignment:
Q  184 atctactgacataagcacttgtgagactgttt 215  Q
    ||||||||||||||||||||||||||||||||    
T  25907581 atctactgacataagcacttgtgagactgttt 25907612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 33645901 - 33646023
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaa-agagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagc 279  Q
    |||||||| |||| |||  ||||||||||||| ||| | ||||| || | || ||||||| ||||| || |||||||||||| |  |||||||| |||||    
T  33645901 tttatctattgacgtaaaaacttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagc 33646000  T
Q  280 tctccaagacagcttataaaaaca 303  Q
    ||||| ||| ||||||| ||||||    
T  33646001 tctcc-agatagcttatgaaaaca 33646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 35267436 - 35267365
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    |||| ||||| | |||| |||||||||| ||||||||  |||||||||||||| | |||| |||||||||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaagataacttaaaaaaacaattt 35267365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 46082160 - 46082061
Alignment:
Q  186 ctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||| ||||| || || ||||||||||    ||||| || |||| ||||||| |||||  |||||||||||||||| ||||||| | |||||||||||    
T  46082160 ctactggcataaacaattttgagactgttaatgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctcca 46082061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 303
Target Start/End: Original strand, 46281079 - 46281203
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| ||||||||| |||||| ||||| ||||  ||||||||||||  |||| || ||||||| | ||| || |||| ||||||||| |||||||   ||    
T  46281079 tgaacttatctactaacataaacacttttgag--tgtttgaaagagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatata 46281176  T
Q  277 agctctccaagacagcttataaaaaca 303  Q
    ||| |||||  | ||||||||||||||    
T  46281177 agccctccagaatagcttataaaaaca 46281203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 25596092 - 25596042
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||| ||||||| | |||||||||||||| ||||||| ||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 28165152 - 28165102
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaa 299  Q
    |||||| |||||||| ||||||||| ||||||||||| || ||||||||||    
T  28165152 cataagctgttttcaacttatttccataagctctccatgatagcttataaa 28165102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 29363641 - 29363603
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgttt 215  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  29363641 tgaacttatctactaacataagcacttgtgagactgttt 29363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 30751647 - 30751613
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttg 216  Q
    ||||||||||||||||||||||||| |||||||||    
T  30751647 ttatctactgacataagcacttgtgcgactgtttg 30751613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 32210319 - 32210273
Alignment:
Q  258 ttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    ||||||| |||||||| ||||||||| |||| |||||||||||||||    
T  32210319 ttttcatattatttccataagctctcaaagatagcttataaaaacaa 32210273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 39281032 - 39280982
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttata 297  Q
    ||||||||||||||||| ||||||||| || | ||||||||| ||||||||    
T  39281032 tccataagttgttttcagcttatttccatatgttctccaagatagcttata 39280982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 48157062 - 48157164
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| ||||||  |||||| |||||||||||||||  ||||| ||   || ||||||| | ||| |||||||| |||||||| ||||||||| |||| ||    
T  48157062 ttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatc 48157161  T
Q  282 tcc 284  Q
    |||    
T  48157162 tcc 48157164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 1710857 - 1710757
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||||| |||||| | ||||||| ||||||||||| ||  || |||| || ||||| |||| |||||||  |||||||| ||||||||| ||| |||    
T  1710857 ttatctactaacataatcccttgtgacactgtttgaaa-agtttaagaaaacagcttacaacatctccataaactgttttcagcttatttccataacctc 1710759  T
Q  282 tc 283  Q
    ||    
T  1710758 tc 1710757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 27626065 - 27626178
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||||| | ||| ||||||||| ||||||| | ||| || | || || |||| ||||| |||||||  |||||| | ||||||||| |||||||    
T  27626065 ttatctactgacgtcagctcttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctc 27626164  T
Q  282 tccaagacagctta 295  Q
    | || || ||||||    
T  27626165 ttcatgatagctta 27626178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 28076678 - 28076601
Alignment:
Q  186 ctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttca 263  Q
    |||||| |||||| ||||||||| |||||||| |||   |||| || ||||| | ||||| |||||||||||||||||    
T  28076678 ctactggcataagaacttgtgagcctgtttgagagaatttacggaaacaactaatgacatgtccataagttgttttca 28076601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 992042 - 992006
Alignment:
Q  312 tttattttttgttatagaaataacttatatgtaagca 348  Q
    |||||||||||||||||||| |||||||| |||||||    
T  992042 tttattttttgttatagaaacaacttatacgtaagca 992006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 39630194 - 39630158
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaa 218  Q
    |||||||||  ||||||||||||||||||||||||||    
T  39630194 ttatctacttgcataagcacttgtgagactgtttgaa 39630158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 42157383 - 42157343
Alignment:
Q  176 atgaatttatctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||||||||||| ||||||||||||| | ||||||    
T  42157383 atgaatttatctactgacttaagcacttgtgaaaatgtttg 42157343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 2996706 - 2996579
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||| || |||||||||||||| ||||||||||||| ||||| || |||| ||||||| ||||| |||||||| | |||||| ||||||| | ||    
T  2996706 tgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcata 2996607  T
Q  277 agctctccaagacagcttataaaaacaa 304  Q
     ||||||||||| ||||||| |||||||    
T  2996606 cgctctccaagatagcttatgaaaacaa 2996579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 28615652 - 28615530
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaa-accaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||| ||||||||||| |||| |||||||||  |||||| || ||| ||||||||| ||||| ||||| || | |||||| ||||||||| ||||||    
T  28615652 ttatctaatgacataagcatttgtaagactgtttcgaagagcttaagaataccaacttatgacatgtccattagatattttcaccttatttccataagct 28615553  T
Q  281 ctccaagacagcttataaaaaca 303  Q
    |||||||| ||| ||||||||||    
T  28615552 ctccaagatagcctataaaaaca 28615530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 23819197 - 23819096
Alignment:
Q  202 ttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||||| |||||  || |||| || |||| ||||| ||||||||||||||||||||||||||  |||||||| ||||| ||||||| ||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T
Q  302 ca 303  Q
    ||    
T  23819097 ca 23819096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 33534111 - 33534212
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| ||||||||| |||||||||| | ||||| ||||| || |||| ||| ||  ||||||||||||||||||||||| ||||||| | |||||||    
T  33534111 ttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttcataagctc 33534210  T
Q  282 tc 283  Q
    ||    
T  33534211 tc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 27123305 - 27123397
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||| |||||||||||||||||| ||||| || | || ||||||| ||||| ||  ||||||||||||| ||||||||| |||||||||||    
T  27123305 cataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctcca 27123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 9843207 - 9843298
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||| ||||||||||||||||| ||||||  || |||| ||||| |  |||||||||||||||||||||| |||||||| | ||||||||||    
T  9843207 ataaccacttgtgagactgtttcaaagagattaagaaaacaactaatcacatatccataagttgttttcagcttatttcatcaagctctcca 9843298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 28232678 - 28232572
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| ||||||| |||||| |||||||| ||||||||||| |||||| |  | || ||||||| ||| |||  ||||||||||||||||||||||||  |    
T  28232678 tgaacttatctattgacatgagcacttgcgagactgtttggaagagcttgtggaaacaacttatgacttatttataagttgttttcatcttatttccaca 28232579  T
Q  277 agctctc 283  Q
    |||||||    
T  28232578 agctctc 28232572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 21157894 - 21157775
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctc 283  Q
    |||||||||||||||||||||| |||||||||| |||||| |||  || || |||| ||||| | || ||| |||||| | ||||||||| ||||||||     
T  21157894 atctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctctt 21157795  T
Q  284 caagacagcttataaaaaca 303  Q
    || || ||| ||| ||||||    
T  21157794 caggatagcatatgaaaaca 21157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 18628495 - 18628606
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||||||||| ||||||||||||||||||  ||||| || |||| ||||||| |          |||||||||||| ||||||||| |||||||    
T  18628495 ttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatg----------aagttgttttcagcttatttccataagctc 18628584  T
Q  282 tccaagacagcttataaaaaca 303  Q
    ||||||| | ||||| ||||||    
T  18628585 tccaagataacttatgaaaaca 18628606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 307
Target Start/End: Complemental strand, 19429842 - 19429710
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||||||||  ||||||||| ||||||| |||||| |||| | ||| ||| || || |  ||||  ||||||| |||||||| ||||||||| ||    
T  19429842 tgaacttatctactcgcataagcacatgtgagattgtttggaagatcttacaaaaacagctcattacattgccataagctgttttcagcttatttccata 19429743  T
Q  277 agctctccaagacagcttata--aaaacaattt 307  Q
    ||||||||| || ||||||||  ||||||||||    
T  19429742 agctctccaggatagcttatatcaaaacaattt 19429710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 6428134 - 6428046
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||||||||||||| |||||| ||||  || |||| ||||||| ||||| ||||||||||| ||| | | ||||||| ||||||||    
T  6428134 ataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataagttgatttaagcatatttccataagctct 6428046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 40532603 - 40532655
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||| ||||    
T  40532603 cataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 53673665 - 53673721
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||    
T  53673665 tccataagttgttttcagcttatttacataagctctccaagatagcttatgaaaaca 53673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 50298643 - 50298609
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||||||||||||||||||||||||||||    
T  50298643 ttatctactgacataagcacttgtgagactgtttg 50298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 22471401 - 22471368
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttg 216  Q
    ||||||||||||||||||||||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttg 22471368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 3595672 - 3595636
Alignment:
Q  248 ccataagttgttttcatcttatttccttaagctctcc 284  Q
    |||||||||||||||| ||||||||||||||||||||    
T  3595672 ccataagttgttttcaacttatttccttaagctctcc 3595636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 17975380 - 17975432
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||| | |||||||||  ||||||||||||| ||||||||||||||    
T  17975380 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaaca 17975432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 22239494 - 22239534
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  22239494 ttatctactgacacaagcacttgtgagactatttgaaagag 22239534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 22523809 - 22523773
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||||| ||||||||||||||||||    
T  22523809 tttatctactgacataagtacttgtgagactgtttga 22523773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 303
Target Start/End: Complemental strand, 27721828 - 27721724
Alignment:
Q  199 cacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataa 298  Q
    ||||||||||| ||||| | ||||| ||  ||| | ||||| |||||||||||||| |||||||| ||||||| |  |||||||||| || | ||||| |    
T  27721828 cacttgtgagattgtttaagagagcttataaaaactacttatgacatatccataagctgttttcagcttattttcgcaagctctccaggataacttatga 27721729  T
Q  299 aaaca 303  Q
    |||||    
T  27721728 aaaca 27721724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 47970424 - 47970321
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtt-tgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||||||||||||||||||||| |||||| || || ||| || | || | ||||  ||||| ||||||| ||||||||| ||||||| | ||||||    
T  47970424 ttatctactgacataagcacttgtgaaactgttatggaa-agcttatggaaactacttgtgacatttccataaattgttttcagcttatttgcataagct 47970326  T
Q  281 ctcca 285  Q
    |||||    
T  47970325 ctcca 47970321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 5131257 - 5131304
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagctt 294  Q
    ||||||||||||||||| ||||||||| ||||||||||| || |||||    
T  5131257 tccataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 2592320 - 2592366
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttata 297  Q
    ||||||||||||| ||||||||| |||||||||||| | ||||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttata 2592366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 4471245 - 4471175
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||| |||||||||||||||||| |||| ||||||| |  ||||| | ||||| ||||||| ||||||    
T  4471245 caacttatgacatatccataagttgtattcaacttattttcagaagcttttcaagatagcttatgaaaaca 4471175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 1017154 - 1017117
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaaga 221  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  1017154 atctactgacataaacacttgtgagactgtttggaaga 1017117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 4798525 - 4798630
Alignment:
Q  199 cacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataa 298  Q
    |||||||||||||||| | |||||| || | || |  |||  ||||| | |||||| |||||| | ||||||| | |||||||||||||| ||||||| |    
T  4798525 cacttgtgagactgttaggaagagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatga 4798624  T
Q  299 aaacaa 304  Q
    ||||||    
T  4798625 aaacaa 4798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 14011293 - 14011248
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    |||| |||||||| ||||||||| |||||||||||||| |||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttat 14011248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 18512457 - 18512498
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||||||||||||||| |||||||||||||  ||||||||||    
T  18512457 ttatctactgacataaacacttgtgagactagttgaaagagc 18512498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 19305000 - 19304935
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    |||| ||||| ||||||||||||||||| ||| ||||| | | |||||||| | ||||||||||||    
T  19305000 cttatgacatgtccataagttgttttcagcttgtttccattaactctccaaaatagcttataaaaa 19304935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 6987682 - 6987786
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||||  ||||||   |||||||||||||||  ||||| || | |  ||||||| ||||| |||||||  | |||||| ||||||||| ||||||    
T  6987682 tttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagct 6987781  T
Q  281 ctcca 285  Q
    |||||    
T  6987782 ctcca 6987786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 30771022 - 30770982
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttga 217  Q
    |||||||||| ||||||||||||| |||| |||||||||||    
T  30771022 tgaatttatccactgacataagcatttgtaagactgtttga 30770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 32071992 - 32071956
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttga 217  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  32071992 tttatctattgacataagcacttgtgagacagtttga 32071956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 47146023 - 47145971
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||||| ||||||| | |||||||| |||||||| |||| ||||    
T  47146023 cataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 307
Target Start/End: Original strand, 37611152 - 37611282
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||||||||| || ||| |||||||||| ||||||| ||||| || |||| ||||||  ||||| | |||||| ||||||||  |||||||| ||    
T  37611152 tgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccata 37611251  T
Q  277 agctctccaagacagcttataaaaacaattt 307  Q
    |||||||||||| ||||||| ||||||||||    
T  37611252 agctctccaagatagcttatgaaaacaattt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 307
Target Start/End: Original strand, 37787882 - 37788012
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||||||||| || ||| |||||||||| ||||||| ||||| || |||| ||||||  ||||| | |||||| ||||||||  |||||||| ||    
T  37787882 tgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccata 37787981  T
Q  277 agctctccaagacagcttataaaaacaattt 307  Q
    |||||||||||| ||||||| ||||||||||    
T  37787982 agctctccaagatagcttatgaaaacaattt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 7908011 - 7907887
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttac-gacatatccataagttgttttcatcttatttccttaagc 279  Q
    |||||||| | |||||| ||||| |||||||||||| |||| | || |||| |||| ||| || |||| ||||||||||||||| |||| || | |||||    
T  7908011 tttatctaataacataaacacttatgagactgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagc 7907912  T
Q  280 tctccaagacagcttataaaaacaa 304  Q
    ||||||||||||||||| |||||||    
T  7907911 tctccaagacagcttatcaaaacaa 7907887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 12459943 - 12460055
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||| ||||||||||||| ||||||||||||||  ||| |||| |||| ||||||| ||||| | |||| ||||||||   ||||||| | |||||||    
T  12459943 ttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctc 12460042  T
Q  282 tccaagacagctt 294  Q
    | ||||| |||||    
T  12460043 tgcaagatagctt 12460055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 36639640 - 36639529
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacag 291  Q
    |||||||||||| | ||||||||||| ||| | |||||||    |||| ||| | |||||||||||||||| |||||||| | |||||||| ||||| ||    
T  36639640 acataagcacttataagactgtttgagagaacttacgaaaattgcttatgacgtgtccataagttgttttcctcttattttcataagctcttcaagatag 36639541  T
Q  292 cttataaaaaca 303  Q
    ||||| ||||||    
T  36639540 cttatgaaaaca 36639529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 33533540 - 33533602
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||| | ||||||    
T  33533540 gacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaaca 33533602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 11457226 - 11457102
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| || || || |||||||||||||||||  |||||| || | || ||||||| ||||| |||||||| || |||||| |||||||  |||||||    
T  11457226 ttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagctg-tttcatattatttctataagctc 11457128  T
Q  282 tccaagacagcttataaaaacaattt 307  Q
    ||||||| | ||| | ||||||||||    
T  11457127 tccaagataacttttgaaaacaattt 11457102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 34975492 - 34975367
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||||| |||||| ||||| |||||||||||||||||||  |   || ||   || ||||||||||||| | ||||||| ||||||||| | |||||    
T  34975492 ttatctactaacataatcacttatgagactgtttgaaagagctcatccaaacatagtatgacatatccataaatcgttttcagcttatttccattagctc 34975393  T
Q  282 tccaagacagcttataaaaacaattt 307  Q
    |||| || ||||||  ||||||||||    
T  34975392 tccaggatagcttacgaaaacaattt 34975367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 307
Target Start/End: Original strand, 12242653 - 12242777
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||||||  || |||| |||||||| | ||||| ||||| || | ||  |||||| |||||   ||| ||||||||||| |||| |||| ||||||||    
T  12242653 tatctactggtatgagcatttgtgagattatttgagagagcttatggaaaaaacttatgacatgaacattagttgttttcagcttacttccataagctct 12242752  T
Q  283 ccaagacagcttataaaaacaattt 307  Q
    |||||| ||||||| ||||||||||    
T  12242753 ccaagatagcttatgaaaacaattt 12242777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 14980637 - 14980519
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||| ||||||||||   |||||||||||| ||||| ||  |||   ||||| ||||| | |||||||||||| | |||||||||| |||||||    
T  14980637 ttatctactggcataagcactatagagactgtttgagagagcttataaaaatgacttatgacatgtacataagttgttt-cgtcttatttccataagctc 14980539  T
Q  282 tccaagacagcttataaaaa 301  Q
    |||| |||| ||||| ||||    
T  14980538 tccatgacaacttattaaaa 14980519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 37526161 - 37526263
Alignment:
Q  202 ttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    |||||||||||||||| ||||| || |||  |||| || ||||| |  ||||| |||||||| ||||||||| |||||||||||  ||| ||||| ||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  302 caa 304  Q
    |||    
T  37526261 caa 37526263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 41957424 - 41957514
Alignment:
Q  213 tttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||| |||||| |||| || || |||| ||||| ||||||||||||||||||||||||| | |||| |||| | || ||||||| ||||||    
T  41957424 tttggaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 32194073 - 32194142
Alignment:
Q  234 aacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||||| ||||| ||||||||||||||||| |||||||   ||||||||| |||| |||||| |||||||    
T  32194073 aacttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaaca 32194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 4619828 - 4619721
Alignment:
Q  189 ctgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaaga 288  Q
    ||||||||||||||||  | ||||||||  ||||| || |||| ||||| | ||||| | |||||| || ||||| ||||||||| |||| |||||| ||    
T  4619828 ctgacataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatga 4619729  T
Q  289 cagcttat 296  Q
     |||||||    
T  4619728 tagcttat 4619721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 10125660 - 10125763
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||||||| ||||||||||| | ||| ||| ||| | || | || ||||||| ||||| |  ||||| |||||||| ||||||| | |||||||    
T  10125660 ttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctc 10125759  T
Q  282 tcca 285  Q
    ||||    
T  10125760 tcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 10391470 - 10391347
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctt-aagct 280  Q
    |||||| ||| ||||| ||||||||||| |||||| |||||  ||  ||| ||  ||| ||||| || || ||||||||||| ||||||||||| || ||    
T  10391470 ttatctgctggcataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctattagttgttttcaacttatttccttaaaact 10391371  T
Q  281 ctccaagacagcttataaaaacaa 304  Q
    ||| | || |||||||||||||||    
T  10391370 ctctaggatagcttataaaaacaa 10391347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 37690598 - 37690681
Alignment:
Q  202 ttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||||||||||||| ||||| || |||  |||| || ||||| |  ||||| |||||||| ||||||||| |||||||||||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctcca 37690681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 10907489 - 10907415
Alignment:
Q  199 cacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    |||||||||||||||||| |||||| || |||| ||||||| | ||| || ||||| |||||||  |||||||||    
T  10907489 cacttgtgagactgtttggaagagcttatgaaaacaacttatgtcatgtcaataagctgttttcggcttatttcc 10907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 29336759 - 29336637
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||| || || ||||||||||||||||| |||| ||||| || | || ||||||| | |||| ||||||  |||||||| ||||| | |  |||||    
T  29336759 tttatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatggcatacccataaaatgttttcagcttatatacaaaagct 29336660  T
Q  281 ctccaagacagcttataaaaaca 303  Q
     |||| || ||||||| ||||||    
T  29336659 atccatgatagcttatgaaaaca 29336637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 38104867 - 38104913
Alignment:
Q  250 ataagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    |||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1084080 - 1084121
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||    
T  1084080 tttatttactgacataagcacttgtgaaactgtttgagagag 1084121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 11297138 - 11297227
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttattt 271  Q
    ||||||| || ||||| ||||||| ||||||||||||||||| || | || ||||||| ||||| || || || | |||||| |||||||    
T  11297138 ttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagctattttcagcttattt 11297227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 12975409 - 12975361
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    ||||||||||||||||| |||| |||| |||||||||||||| |||||||    
T  12975409 tccataagttgttttcaactta-ttccataagctctccaagatagcttat 12975361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 25720359 - 25720400
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||||||||| ||||||||||||||||||||| ||| |||||    
T  25720359 ttatctactggcataagcacttgtgagactgtctgagagagc 25720400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 35960516 - 35960427
Alignment:
Q  207 agactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    ||||| ||||| ||||| || | || ||||||||||||| |||||||| |||||| | |||||||| ||| ||| |||| || |||||||    
T  35960516 agactatttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttat 35960427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 7319015 - 7319071
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||| ||| ||||||| | |||| ||||||||| ||||||| ||||||    
T  7319015 tccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 7319071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 340
Target Start/End: Complemental strand, 12521589 - 12521495
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattttaactttatttt---ttgttatagaaataacttata 340  Q
    |||||| |||||||| ||||||||| |||||||| ||| | |||||||| |||  | ||| ||| ||||||   |||||||||||| ||||||||    
T  12521589 cataagctgttttcagcttatttccataagctcttcaaaatagcttatacaaaacagtttgactctattttagtttgttatagaaacaacttata 12521495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 16457573 - 16457645
Alignment:
Q  200 acttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||||||||||||||| |||||| || | || ||| ||  ||||| | ||||||||||||||| ||||||||    
T  16457573 acttgtgagactgtttggaagagcatatggaaacaaattgtgacatgttcataagttgttttcagcttatttc 16457645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 18543193 - 18543260
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    |||| ||||| ||||| ||||||||||| ||||||| | ||||||||||| || ||||||| |||||||    
T  18543193 cttatgacatgtccatgagttgttttcagcttattt-cataagctctccaggatagcttatgaaaacaa 18543260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 18906405 - 18906349
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||||| ||||||||  |||||| | ||||| ||||||| ||||||    
T  18906405 tccataagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaaca 18906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 26005012 - 26005060
Alignment:
Q  255 ttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||| ||||||||| |||||||||||||  ||||||| ||||||    
T  26005012 ttgttttcaccttatttccataagctctccaagctagcttatgaaaaca 26005060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 36774726 - 36774770
Alignment:
Q  259 tttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||| ||||||||| ||||||||||| || ||||||||||||||    
T  36774726 tttcagcttatttccataagctctccaggatagcttataaaaaca 36774770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 37273251 - 37273141
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagc 292  Q
    |||||||||| |||||||||||||  ||||| || | || ||||||| ||||| ||||||||||||||||| ||||||||| |||| ||||||||| |||    
T  37273251 cataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagc 37273152  T
Q  293 ttataaaaaca 303  Q
    |||| ||||||    
T  37273151 ttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 43115184 - 43115083
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| |||||||| ||||||||||| |||||| |||||  || | || ||||||| ||||| ||||||| ||||||||| ||||||||| |||||||    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctc 43115085  T
Q  282 tc 283  Q
    ||    
T  43115084 tc 43115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 24281174 - 24281072
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||||||  ||||||||||||| || ||||||| ||||| || |||| ||||||| || || ||||||||||||||||| |||| || | ||||||||    
T  24281174 tatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctct 24281075  T
Q  283 cca 285  Q
    |||    
T  24281074 cca 24281072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 26542667 - 26542562
Alignment:
Q  180 atttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagc 279  Q
    ||||||||||| ||||||| |||||| |||||||||| |||||| |||  || ||||||| || || || |||| ||||||||| ||||||||| ||| |    
T  26542667 atttatctactcacataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataacttgttttcaacttatttccataaac 26542568  T
Q  280 tctcca 285  Q
    ||||||    
T  26542567 tctcca 26542562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 1810102 - 1810015
Alignment:
Q  185 tctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    |||||| |||||| ||||||||||||| ||||| ||||| |||| || ||||||| ||||| ||||| ||||||||||  ||||||||    
T  1810102 tctactaacataatcacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttc 1810015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22667531 - 22667413
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||||||||||||||||||||||||||||| ||||  || | || || | ||  |||| | || ||||| |||| | ||||||||| |||||||    
T  22667531 ttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat-ttcagaagttatttttagcttatttccgtaagctc 22667433  T
Q  282 tccaagacagcttataaaaa 301  Q
    ||||||| ||||||| ||||    
T  22667432 tccaagatagcttatgaaaa 22667413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22724170 - 22724052
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||||||||||||||||||||||||||||| ||||  || | || || | ||  |||| | || ||||| |||| | ||||||||| |||||||    
T  22724170 ttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat-ttcagaagttatttttagcttatttccgtaagctc 22724072  T
Q  282 tccaagacagcttataaaaa 301  Q
    ||||||| ||||||| ||||    
T  22724071 tccaagatagcttatgaaaa 22724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 37825196 - 37825125
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    |||| ||||| |||||||||||||||||  |||||||| ||||||||||| || |||| |||||||||||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaacaattt 37825125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 50211863 - 50211773
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    ||||||||| |||||||||||||| ||||||||||| ||| | || |||| |||||||  ||| |||||| ||||| |||||||||||||||    
T  50211863 ttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttataacacatccat-agttgatttcatcttatttcc 50211773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 340
Target Start/End: Original strand, 49586937 - 49587042
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttata--aaaacaatt----ttaactttattttttgttatagaaataa 334  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||||| ||||||||  |||||| ||    || | ||||| ||||||||||||||||     
T  49586937 gacatatccataagttgttttcagtttatttctttaatctctccaagatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatag 49587036  T
Q  335 cttata 340  Q
    ||||||    
T  49587037 cttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 11039296 - 11039396
Alignment:
Q  197 agcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    |||| |||||||||||||||||||||| || | || ||  ||| ||||| ||||||||||||||||| ||||| ||| |||||| || |||| || ||||    
T  11039296 agcaattgtgagactgtttgaaagagcttatggaaacatattatgacatgtccataagttgttttcagcttatctccataagctatctaagaaagtttat 11039395  T
Q  297 a 297  Q
    |    
T  11039396 a 11039396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 25182941 - 25183001
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataag 254  Q
    ||||| |||||||||||||||||| ||||| || |||| ||||||| ||||||||||||||    
T  25182941 ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccataag 25183001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 30573857 - 30573977
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||||||||||||||||||||||  ||||||  ||| | || |||| ||| ||| | ||| | |||||| |||||||| ||||| | | | ||||||    
T  30573857 tatctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctct 30573956  T
Q  283 ccaagacagcttataaaaaca 303  Q
    |||||| ||||||| ||||||    
T  30573957 ccaagatagcttatgaaaaca 30573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 14548679 - 14548766
Alignment:
Q  198 gcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||||||||||||||||| ||||| || |||| |||| || ||||| |  ||| | |||||||| ||||||||| |||||||||||    
T  14548679 gcacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctcca 14548766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 21872237 - 21872271
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||||||||||||||||||||||||||||    
T  21872237 ttatctactgacataagcacttgtgagactgtttg 21872271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 27294475 - 27294353
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||| || ||||||||||||||||||||||||| |||||  |   || ||||| | || ||   |||||| ||||||||||||||||||||| | |    
T  27294475 tttatctattgtcataagcacttgtgagactgtttgagagagctcatagaaacaactcatgatatgctcataagctgttttcatcttatttccttatgat 27294376  T
Q  281 ctccaagacagcttataaaaaca 303  Q
    || || ||||| |||| ||||||    
T  27294375 ctacatgacagtttatgaaaaca 27294353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 52323838 - 52323963
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcct--taagctc 281  Q
    ||||||| |||||||||||||  ||||||||||  ||||| ||   ||  || ||| ||||  |||||||| |||||||| |||||||||   |||||||    
T  52323838 atctactaacataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgttttcaacttatttccacataagctc 52323937  T
Q  282 tccaagacagcttataaaaacaattt 307  Q
    ||||||| ||||||| ||||||||||    
T  52323938 tccaagatagcttatcaaaacaattt 52323963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 20192545 - 20192650
Alignment:
Q  179 aatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaag 278  Q
    |||||||||| |||||||||||||| | | ||||| ||| ||||| ||   || || |||| ||||| |||||||| |||||||| || |||||| ||||    
T  20192545 aatttatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataag 20192644  T
Q  279 ctctcc 284  Q
    ||||||    
T  20192645 ctctcc 20192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 36200173 - 36200108
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataa 298  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||| || || |||||||||    
T  36200173 caacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttataa 36200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 21574595 - 21574499
Alignment:
Q  205 tgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||  ||||| || |||| ||||||| ||||| | |||||| || ||| | ||||||||| ||||||||||| |  ||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 34707449 - 34707525
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttat 269  Q
    ||||||| ||||||||||||||||| ||| | |  |||| ||||||  ||||| ||||||||||||||||| |||||    
T  34707449 cataagcgcttgtgagactgtttgagagaacttttgaaaacaacttgtgacatgtccataagttgttttcaacttat 34707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 20210870 - 20210905
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||| |||||||||||||||||||    
T  20210870 ttatctactgacataaccacttgtgagactgtttga 20210905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 21862177 - 21862228
Alignment:
Q  242 acatatccataagttgttttcatcttatttccttaagctctccaagacagct 293  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| ||| ||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagct 21862228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 25186048 - 25185993
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaac 302  Q
    ||||||||||||||||||||||||| |  ||| | ||||||| |||||||||||||    
T  25186048 tccataagttgttttcatcttattttcacaagatttccaagatagcttataaaaac 25185993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 29771915 - 29771868
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| ||||||    
T  29771915 caacttaggacatgtccataagttgttttcaacttatttccataagct 29771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 37138414 - 37138375
Alignment:
Q  178 gaatttatctactgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  37138414 gaatttatctactgacataaacacttgtgagactatttga 37138375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 42745115 - 42745068
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||| ||||| | ||||||||||||||||||||||||| ||||||    
T  42745115 caacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 1217773 - 1217863
Alignment:
Q  213 tttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||| |||||| |||| || || |||| ||||| |||||||||||||||||||||| || | |||| |||| | || ||||||| ||||||    
T  1217773 tttggaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaaca 1217863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 26330265 - 26330363
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||||| ||||| | ||||||||||||||  |||||| || |||| ||||||  ||||| | |||| ||| ||||||  |||||||| ||||||    
T  26330265 ttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaacttctgacatgttcataggttcttttcaggttatttccataagct 26330363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 30657415 - 30657373
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||    
T  30657415 tttatctactgacataagcacttttgagattgtttggaagagc 30657373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 8697705 - 8697664
Alignment:
Q  262 catcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||||||||||| ||| |||||| |||||||    
T  8697705 catcttatttccttaagctctcctagatagcttagaaaaaca 8697664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 9049592 - 9049551
Alignment:
Q  262 catcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||||||||||| ||| |||||| |||||||    
T  9049592 catcttatttccttaagctctcctagatagcttagaaaaaca 9049551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 36646325 - 36646446
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||| || |||| |||||||| ||||| ||||  ||||| || | || | ||||| | ||| |||||||| |||||||||||||||||  ||| ||||    
T  36646325 tatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactct 36646424  T
Q  283 ccaagacagcttataaaaacaa 304  Q
    | | || ||||||| |||||||    
T  36646425 ctaggatagcttatgaaaacaa 36646446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 37155127 - 37155038
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    ||||||| |||||| || ||||||||||||| |||||||  || | ||  ||||||  |||| ||||||||||||||||  |||||||||    
T  37155127 atctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataagttgttttctacttatttcc 37155038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 37200482 - 37200393
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    ||||||| |||||| || ||||||||||||| |||||||  || | ||  ||||||  |||| ||||||||||||||||  |||||||||    
T  37200482 atctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataagttgttttctacttatttcc 37200393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 41644387 - 41644508
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||  |||||||||||| || |||||||   ||| | ||  ||| ||||||  ||||| | |||||| |||||||| |||||||||||||| ||    
T  41644387 ttatctactagcataagcacttgagacactgtttaggagaacttataaaaacaacttgggacattttcataagctgttttcagcttatttccttaagatc 41644486  T
Q  282 tccaagacagcttataaaaaca 303  Q
    || | || ||||||| ||||||    
T  41644487 tctacgatagcttatgaaaaca 41644508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 44237546 - 44237513
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtt 214  Q
    ||||||||||||||||||||||||||| ||||||    
T  44237546 tttatctactgacataagcacttgtgaaactgtt 44237513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 50952440 - 50952355
Alignment:
Q  203 tgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaaga 288  Q
    |||||||||||| || ||| | ||||||| || |||| ||||| | |||||  |||||| | ||||||||| ||||||||||||||    
T  50952440 tgtgagactgttcgagagaacgtacgaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaaga 50952355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 2081084 - 2081140
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttata 297  Q
    |||| |||| ||||||||||||| ||||||||| | |||||||| ||| ||||||||    
T  2081084 gacacatccttaagttgttttcagcttatttccattagctctccgagatagcttata 2081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 2719531 - 2719475
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||| ||| ||||||| | |||| ||||||||| ||||||| ||||||    
T  2719531 tccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 2719475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 3015822 - 3015874
Alignment:
Q  219 agagcctacgaaaccaacttacgacatatccataagttgttttcatcttattt 271  Q
    ||||| || |||| ||||||| ||||| |||||||| ||||||||||||||||    
T  3015822 agagcttatgaaaacaacttatgacatgtccataagatgttttcatcttattt 3015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 16790186 - 16790222
Alignment:
Q  312 tttattttttgttatagaaataacttatatgtaagca 348  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  16790186 tttatcttttgttatagaaataacttatatataagca 16790222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 23785318 - 23785262
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||||| ||| ||||| ||||||||||| || ||||| | ||||||    
T  23785318 tccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaaca 23785262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 23793644 - 23793588
Alignment:
Q  250 ataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaatt 306  Q
    |||||||||||||| ||||||||  |||||| ||||||| ||||||| ||| |||||    
T  23793644 ataagttgttttcagcttatttctataagctttccaagatagcttatgaaaccaatt 23793588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 24158458 - 24158518
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacga 242  Q
    ||||||||||||||||| |||||||| ||||||||  ||||| || | || ||||||||||    
T  24158458 ttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaacttacga 24158518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 47584577 - 47584537
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||||| |||||||||||||||||||||| ||||| |||||    
T  47584577 tatctattgacataagcacttgtgagactatttgagagagc 47584537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 50004782 - 50004690
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcc-tacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||| |||||||||||||| |||| ||||||||||| || ||| || | || ||||||| ||||| | | |||| |||||||| ||||||||    
T  50004782 tttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgttcttaagctgttttcagcttatttc 50004690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 35486050 - 35485923
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||||||| |||||||| |||||||||||||||||| ||| | ||| ||| ||||||| || || | |||||| |||||||| || |||||| ||    
T  35486050 tgaacttatctaccgacataagaacttgtgagactgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccata 35485951  T
Q  277 agctctccaagacagcttataaaaacaa 304  Q
     ||||| || || |||||||||||||||    
T  35485950 ggctcttcaggatagcttataaaaacaa 35485923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 18840856 - 18840806
Alignment:
Q  250 ataagttgttttcatcttatttccttaagctctccaagacagcttataaaa 300  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  18840856 ataagttgttttcatcttatttccataagctctccaagacatcttataaaa 18840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 34652029 - 34652097
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||| ||||| |||||||| |||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  34652029 caacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 39622084 - 39621981
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||||||||   ||||||||||| || ||||||||| ||| | || |||| ||||||| |||| || ||||| ||||||||| ||||||||||||    
T  39622084 tgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttatttcctta 39621985  T
Q  277 agct 280  Q
    ||||    
T  39621984 agct 39621981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 43985338 - 43985215
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||||||||||| ||||||| | ||||||||| ||||  |||  || ||||||| ||||| |||||||| | |||||| ||| ||||| ||||||    
T  43985338 tttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaacttgtttccataagct 43985239  T
Q  281 ctccaagacagcttataaaaacaa 304  Q
    || || |  |||||| ||||||||    
T  43985238 cttcacggtagcttacaaaaacaa 43985215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 16867808 - 16867746
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||| | ||||||    
T  16867808 gacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaaca 16867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 307
Target Start/End: Original strand, 43456644 - 43456774
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| |||| |||| |||||| ||||||| ||||||||||||||||| |  |||| ||||| | ||||| |||||||  |||||||| ||||||||| ||    
T  43456644 tgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttatttccata 43456743  T
Q  277 agctctccaagacagcttataaaaacaattt 307  Q
     | | | ||||| |||||| | |||||||||    
T  43456744 tgtttttcaagatagcttacagaaacaattt 43456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 7283116 - 7283003
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagac 289  Q
    |||||||| ||||||||||||| |||| |  ||| |  | || ||||||| || || ||||||||||||||||||||||| ||| |||||||||| | |     
T  7283116 tgacataaacacttgtgagactatttggattagcttttggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacat 7283017  T
Q  290 agcttataaaaaca 303  Q
    ||||||| ||||||    
T  7283016 agcttatgaaaaca 7283003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 25609924 - 25609829
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaa 277  Q
    ||||||||| ||||||| ||||||||||||| ||| || ||| || | || ||||||| |||| ||||||| ||||||||||  || |||||||||    
T  25609924 ttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgacaaatccatatgttgttttcaatttctttccttaa 25609829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 41809198 - 41809305
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagc 292  Q
    ||||| |||||||||||||| ||| |||||| |  | || ||||||| ||||| | ||||||||||||| | ||||||||| |||||| || |||| |||    
T  41809198 cataaacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagc 41809297  T
Q  293 ttataaaa 300  Q
    || |||||    
T  41809298 ttgtaaaa 41809305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 787459 - 787373
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttat 269  Q
    ||||||||| ||||||||||||||| ||||||||  ||| | || |||| || |||| ||||| |||||||| |||||||| |||||    
T  787459 tatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttat 787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 1939325 - 1939395
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||| ||||| |||||||| |||||||| ||||||||| |||||||||||  | ||||||| ||||||    
T  1939325 caacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 9478432 - 9478314
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||| ||||||||  ||||||| ||||||| |||||||||| ||||  || | || |||||||  |||| |||||||| ||||||||||||| |||| |     
T  9478432 tgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatc 9478333  T
Q  277 agctctccaagacagctta 295  Q
    | ||||||| || ||||||    
T  9478332 aactctccacgatagctta 9478314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 12313126 - 12313240
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagc 292  Q
    ||||||||||||||||| ||||||  |||   || |||| || |||| | ||| | ||||||||| ||||| ||||||| | |||||||||||||| |||    
T  12313126 cataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagc 12313225  T
Q  293 ttataaaaacaattt 307  Q
    ||||  |||||||||    
T  12313226 ttatgtaaacaattt 12313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 303
Target Start/End: Original strand, 35379025 - 35379079
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||    
T  35379025 cataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 42852639 - 42852693
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaa 231  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||||| ||||    
T  42852639 tgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaa 42852693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 43065429 - 43065519
Alignment:
Q  219 agagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaatttta 309  Q
    ||||| || |||| ||||||| ||||| ||||||| ||||||||| ||||||||  ||||||||||| || | ||||| ||||||| ||||    
T  43065429 agagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaacttta 43065519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 43142000 - 43141878
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacga-aaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||| ||||||||| |||||| || |||||| || || || |  || ||||||| |||||  ||||||||||||||||| |||||||| ||| ||    
T  43142000 ttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataagttgttttcattttatttccataaact 43141901  T
Q  281 ctccaagacagcttataaaaaca 303  Q
    || || || ||||||| ||||||    
T  43141900 cttcaggatagcttatgaaaaca 43141878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 9878637 - 9878726
Alignment:
Q  195 taagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcc 284  Q
    ||||||||| |||||||||  | |||||| || | || ||||||| ||||| ||||||||||||||||  |||||||| | |||||||||    
T  9878637 taagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataagttgttttcgacttatttcttcaagctctcc 9878726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 44606060 - 44606133
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttca 263  Q
    ||||||||| ||||||  ||||||||| |||| | || |||| ||||||| ||||| |||||||||||||||||    
T  44606060 tgacataagtacttgtacgactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgttttca 44606133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 3078651 - 3078703
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||| | |||||||||  ||||||||||||| ||||||||||||||    
T  3078651 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaaca 3078703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 13234623 - 13234547
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttat 269  Q
    ||||||||||||| ||||||||||| || || ||| ||| ||  ||| ||||| ||||||||||||||||| |||||    
T  13234623 cataagcacttgtaagactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttat 13234547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 36863621 - 36863692
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    ||||||||||||| ||||  | ||| || ||||||| | |||||||||||||| ||||||| ||||||||||    
T  36863621 cttacgacatatctataaactatttccaacttattttcataagctctccaagatagcttatgaaaacaattt 36863692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 13869047 - 13869085
Alignment:
Q  179 aatttatctactgacataagcacttgtgagactgtttga 217  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  13869047 aatttatctactgacataagcacttatgagactatttga 13869085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 22878226 - 22878192
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttg 216  Q
    ||||| |||||||||||||||||||||||||||||    
T  22878226 ttatccactgacataagcacttgtgagactgtttg 22878192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 33192329 - 33192216
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||| ||||||||| ||||  |||||||||||||| || | || |||| ||  ||| |||||||||||||| |||||||| ||||| |   |||||||    
T  33192329 ttatctgctgacataaacactcatgagactgtttgaa-gaacttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctc 33192231  T
Q  282 tccaagacagcttat 296  Q
    |||| || |||||||    
T  33192230 tccaggatagcttat 33192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 40158845 - 40158743
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    |||||||||||||||| ||||||||||||| |||   || | || |||| || |||| ||||| |  |||||||||||||| |||| || | ||||||||    
T  40158845 tatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctct 40158746  T
Q  283 cca 285  Q
    |||    
T  40158745 cca 40158743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 303
Target Start/End: Original strand, 8187407 - 8187516
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagct 293  Q
    |||| ||||||||||||||||||||||| | || |||  ||||||| || || | |  ||||||||||||  |||||||| ||| ||||||| |  ||||    
T  8187407 ataaccacttgtgagactgtttgaaagaacttatgaatacaacttatgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagct 8187506  T
Q  294 tataaaaaca 303  Q
    ||| ||||||    
T  8187507 tatgaaaaca 8187516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 14299586 - 14299663
Alignment:
Q  195 taagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    |||||||||| | ||||||||| |||||  || | || ||||||| ||||||||||||  ||||||||| ||||||||    
T  14299586 taagcacttgagggactgtttggaagagtttatggaaacaacttatgacatatccatacattgttttcagcttatttc 14299663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 14451038 - 14451103
Alignment:
Q  228 gaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagct 293  Q
    |||| ||||||| |||||  ||||||| |||||||| |||||||||  ||||| ||||||||||||    
T  14451038 gaaaacaacttatgacatgaccataagctgttttcagcttatttccacaagctatccaagacagct 14451103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 17443545 - 17443590
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    |||| |||| |||||| ||||||||||||||||||||||| |||||    
T  17443545 tgaacttatatactgatataagcacttgtgagactgtttggaagag 17443590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 25796202 - 25796243
Alignment:
Q  242 acatatccataagttgttttcatcttatttccttaagctctc 283  Q
    |||||||||||||||||||||| ||||||||  |||||||||    
T  25796202 acatatccataagttgttttcagcttatttcaataagctctc 25796243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 1318363 - 1318296
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatcca 250  Q
    |||||||||| ||||||||||||||||||||||||  ||||| || |||| || |||| ||||| ||||    
T  1318363 ttatctactg-cataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 16947154 - 16947051
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||| ||||||||||||| ||||| ||||||| || ||| || | || ||||||| ||||| | ||||| || |||||| ||||||||  | ||||    
T  16947154 tttatctaatgacataagcactagtgaggctgtttggaacagcttatggaa-caacttatgacatgttcataaattattttcaacttatttctatgagct 16947056  T
Q  281 ctcca 285  Q
    |||||    
T  16947055 ctcca 16947051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 17017819 - 17017716
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||| ||||||||||||| ||||| ||||||| || ||| || | || ||||||| ||||| | ||||| || |||||| ||||||||  | ||||    
T  17017819 tttatctaatgacataagcactagtgaggctgtttggaacagcttatggaa-caacttatgacatgttcataaattattttcaacttatttctatgagct 17017721  T
Q  281 ctcca 285  Q
    |||||    
T  17017720 ctcca 17017716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 27288358 - 27288330
Alignment:
Q  305 ttttaactttattttttgttatagaaata 333  Q
    |||||||||||||||||||||||||||||    
T  27288358 ttttaactttattttttgttatagaaata 27288330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 28803472 - 28803544
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataag 254  Q
    |||||||| | ||||||||| ||||||||||||||| ||| | || | || ||||||| ||||| ||||||||    
T  28803472 ttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataag 28803544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 38077025 - 38077117
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcc 284  Q
    |||||| ||||||||||| ||||||| ||| | |   ||| ||||||||||||| ||||||||  ||||||| | ||||||  ||||||||||    
T  38077025 acataaacacttgtgagattgtttgagagaacttcttaaaacaacttacgacatttccataagaggttttcagcctatttctataagctctcc 38077117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 41033032 - 41033076
Alignment:
Q  296 taaaaacaattttaactttattttttgttatagaaataacttata 340  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||    
T  41033032 taaaaacaattttatttttatcttttgttatagaaatagcttata 41033076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 4868532 - 4868430
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcctta 276  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||  || |||| ||||||| ||||| || |||||||||||||| ||||||| | ||    
T  4868532 tgaatttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa-caacttatgacatgtcaataagttgttttcaacttatttacata 4868434  T
Q  277 agct 280  Q
    ||||    
T  4868433 agct 4868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 32515382 - 32515497
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||||||| |||||||||||||||||||||||||  ||||| || | || || | || ||||| || |||||||||||||| ||||| ||  ||||||    
T  32515382 tttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagct 32515481  T
Q  281 ctccaagacagcttat 296  Q
    ||||| || |||||||    
T  32515482 ctccatgatagcttat 32515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 12564441 - 12564563
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| |||||| ||||||||||||| |||||||||  ||||| |||| |   | |||| ||||  || |||||||||||||| ||||||||| |||| ||    
T  12564441 ttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagcttatttccataagttc 12564540  T
Q  282 tccaagacagcttataaaaacaa 304  Q
    ||||||| ||||||| |||||||    
T  12564541 tccaagatagcttatgaaaacaa 12564563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 31517682 - 31517796
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| ||||| ||||||||||||||||||||||||  ||| | ||  ||| ||||| | ||||| | |||||| |||||||| ||||||| | |||||||    
T  31517682 ttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctc 31517781  T
Q  282 tccaagacagcttat 296  Q
    |||||||||| ||||    
T  31517782 tccaagacagattat 31517796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 27140606 - 27140485
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| |||||||| || |||| || || ||||| ||||  || | || || |||| ||||| ||||||||||||||||| ||||||| | |||||||    
T  27140606 ttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctc 27140507  T
Q  282 tccaagacagcttataaaaaca 303  Q
    |||| || ||||||||||||||    
T  27140506 tccatgatagcttataaaaaca 27140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 288
Target Start/End: Original strand, 4768770 - 4768877
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||| |||| ||||| |||||||||||| |||||  | | | ||||||| || |||||||||| ||||||| ||||||||| ||||||||| |||  |    
T  4768770 tttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttacgacatgtccataacttgttttcagcttatttccataaatt 4768869  T
Q  281 ctccaaga 288  Q
    ||||||||    
T  4768870 ctccaaga 4768877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 6279523 - 6279408
Alignment:
Q  186 ctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    ||||||||||||||||||||| | |||||||| ||||| || | || ||  | || |||| ||||||||||||||||| | ||||||| ||||||||| |    
T  6279523 ctactgacataagcacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctcta 6279424  T
Q  286 agacagcttataaaaa 301  Q
     || ||||||| ||||    
T  6279423 ggatagcttatgaaaa 6279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 15581382 - 15581292
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    |||||||||||||||||||||||||||| |||||| ||||||  | | || ||||||| ||||| || ||||| |||||||| | ||||||    
T  15581382 ttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttc 15581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 35017645 - 35017583
Alignment:
Q  241 gacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||| |||||||||| |||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  35017645 gacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaaca 35017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 30259456 - 30259540
Alignment:
Q  210 ctgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagctt 294  Q
    |||||||||||||| ||   || ||||||||||||| || |||| ||||||||| ||||||||| ||||||||||| || |||||    
T  30259456 ctgtttgaaagagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctt 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 28689448 - 28689509
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttata 297  Q
    |||| ||||| ||||||||||||||||| ||||||| | |||||| ||||||| ||||||||    
T  28689448 cttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttata 28689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 3110111 - 3110019
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||||||||||  ||||||||||| |||| | || | || ||||||  |||| |||||||| ||||||||  ||||||||| ||||||||    
T  3110111 tgacataagcacttccgagactgtttgtaagaacttatgcaaacaacttgtgacacatccataacttgttttccgcttatttccataagctct 3110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 15579615 - 15579519
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    ||||||||||||||  |||||| |||||  ||||||||||  ||||| |  | || ||||||| ||||| ||||||||||||| ||| |||||||||    
T  15579615 tgaatttatctactagcataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttcc 15579519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 24460338 - 24460378
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttga 217  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  24460338 tgaacttatctactgacatgagcacttgtgagactgtttga 24460378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 6262131 - 6262044
Alignment:
Q  199 cacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaa 286  Q
    |||||||||||||||||  |||||| || || | ||||||| ||||| | |||||| | |||||| |||||||||  |||||||||||    
T  6262131 cacttgtgagactgtttacaagagcttatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagctctccaa 6262044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 26179596 - 26179471
Alignment:
Q  185 tctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcc 284  Q
    ||||||| ||||| |||||||||||||||| |  ||||  || | || ||||||| ||||| | ||| ||||||||||| | | ||||| ||| ||||||    
T  26179596 tctactggcataaacacttgtgagactgttagggagagtttaaggaaacaacttatgacatgtgcatgagttgttttcagcat-tttccataaactctcc 26179498  T
Q  285 aagacagcttata--aaaacaatttta 309  Q
    |||| ||||||||  ||||||||||||    
T  26179497 aagatagcttatatcaaaacaatttta 26179471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 28836989 - 28837020
Alignment:
Q  184 atctactgacataagcacttgtgagactgttt 215  Q
    ||||||||||||||||||||||||||||||||    
T  28836989 atctactgacataagcacttgtgagactgttt 28837020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 34290310 - 34290243
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||| ||||||| ||||||||||||||| ||||||| | |||| ||| ||||| ||||||| ||||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaaca 34290243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 46252675 - 46252738
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttat 296  Q
    ||||||| ||||| | |||||||||||||||  |||||| | |||||||||||||| |||||||    
T  46252675 caacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttat 46252738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 29834898 - 29834972
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    ||||||||||| | |||||||| | ||||||  |||||||| |||||||| || || ||||||| ||||||||||    
T  29834898 caacttacgacgtgtccataagcttttttcaatttatttccataagctctacatgatagcttatgaaaacaattt 29834972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 33339436 - 33339474
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgttt 215  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  33339436 tgaatttatctattgacaaaagcacttgtgagactgttt 33339474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 43371836 - 43371874
Alignment:
Q  185 tctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  43371836 tctactggcataagcacttgtgagactgtttgagagagc 43371874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 12477283 - 12477348
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    |||| ||||| ||||||||||||||||| ||||||||| ||  ||||||| || ||||||| ||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaa 12477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 26916319 - 26916226
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    ||||||||||| || ||||||||||  |||||  ||| || ||  ||| ||||  |||||||||||||| || ||||||||| |||||||||||    
T  26916319 acataagcactagtaagactgtttgggagagctaacggaaacagtttaagacaattccataagttgtttccagcttatttccataagctctcca 26916226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 28837295 - 28837328
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgttt 215  Q
    ||||||||||||||||||||||| ||||||||||    
T  28837295 ttatctactgacataagcacttgagagactgttt 28837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 34422111 - 34422156
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    |||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  34422111 tgaatttatctagtgacataagcacttgtgatactctttgatagag 34422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 43333798 - 43333705
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaa 286  Q
    |||||||| ||||| |||||||  ||||| | || | || |||||||   ||| ||||||| || |||||||||||||||| ||||||||||||    
T  43333798 cataagcatttgtgtgactgttgaaaagaacttatggaaacaacttaattcatgtccataaattattttcatcttatttccataagctctccaa 43333705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 47598428 - 47598485
Alignment:
Q  247 tccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    ||||||||||||||||| ||| || || ||||||||||| || ||||||| |||||||    
T  47598428 tccataagttgttttcagcttgttgccataagctctccaggatagcttatgaaaacaa 47598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 4548780 - 4548728
Alignment:
Q  251 taagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    ||||||||||| | ||||||| || ||||||||||||| ||||||| ||||||    
T  4548780 taagttgtttttagcttattttctgaagctctccaagatagcttatgaaaaca 4548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 5276369 - 5276317
Alignment:
Q  234 aacttacgacatatccataagttgttttcatcttatttccttaagctctccaa 286  Q
    |||||| ||||| | |||||||||||||||  |||||| ||||||||||||||    
T  5276369 aacttatgacatgttcataagttgttttcaagttattttcttaagctctccaa 5276317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 14629975 - 14630027
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||||||| ||||    
T  14629975 cataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaa 14630027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 33108630 - 33108666
Alignment:
Q  248 ccataagttgttttcatcttatttccttaagctctcc 284  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  33108630 ccataagttgttttcaacttatttccataagctctcc 33108666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 38170632 - 38170732
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| ||||| ||| | |||||||||||||| |||  ||||| || |||| || |||| ||||| | ||||||||||||||| ||| ||| | |||||||    
T  38170632 ttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcagcttgttttcctaagctc 38170731  T
Q  282 t 282  Q
    |    
T  38170732 t 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 40485717 - 40485749
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttg 216  Q
    ||||||| |||||||||||||||||||||||||    
T  40485717 atctacttacataagcacttgtgagactgtttg 40485749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 42336731 - 42336663
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttc 262  Q
    ||||||||||||| |||||||||| | | | || |||| ||||||| ||||| |||| |||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgtccaaaagttgttttc 42336663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 10559 - 10650
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    |||| |||||||||||| |||||||||||||||||| | ||| || | || ||||| | ||||| ||||||||||||||||| |||||||||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttcc 10650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 30918220 - 30918122
Alignment:
Q  202 ttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    |||||||||||||||| ||||| || |||| ||||||  ||||| || |||||||||||||| ||||||||| |||||||||||||| | ||||| ||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacatttc-ataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaa 30918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 43504879 - 43504758
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||| | |||||||||||| ||||||||   ||| |  | |||| ||||||||||| | |  ||||| |||||||| ||||||||| |||| ||    
T  43504879 ttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaacttacgacttgtttataagctgttttcagcttatttccataagttc 43504780  T
Q  282 tccaagacagcttataaaaaca 303  Q
    ||||||| ||||||||||||||    
T  43504779 tccaagatagcttataaaaaca 43504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 2091880 - 2091801
Alignment:
Q  193 cataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||| ||||||||||| ||||||| |||||  || ||| ||||||| || |||||||||||||||||||| ||||||||    
T  2091880 cataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgttttcaacttatttc 2091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 33553358 - 33553243
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacag 291  Q
    ||||||||||||||||  ||||||| |||||| ||   || ||||||| ||||| ||| |||| ||||  || ||||||||| |||||||| ||||| ||    
T  33553358 acataagcacttgtgatgctgtttggaagagcttattgaagcaacttatgacatgtccctaagctgttcccagcttatttccataagctcttcaagatag 33553259  T
Q  292 cttataaaaacaattt 307  Q
    ||||| ||||||||||    
T  33553258 cttatgaaaacaattt 33553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 7918388 - 7918510
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    ||||||| || ||||||||  || |||||||||||  ||||| || |||| ||||||| ||||| | |||||| ||||| || ||||||||  |||||||    
T  7918388 ttatctaatggcataagcagatgagagactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctc 7918487  T
Q  282 tccaagacagcttataaaaacaa 304  Q
    ||||||| ||||||  |||||||    
T  7918488 tccaagatagcttacgaaaacaa 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 13000370 - 13000464
Alignment:
Q  186 ctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||||| ||||||||||||||||||| |||| |||||  || |  | ||||||| ||||| |||| |||||||||||| ||||||||| ||||||    
T  13000370 ctactggcataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 25881356 - 25881398
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  25881356 tttatctactgacataagtacttgtgagactgtttgaaagagc 25881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 779027 - 779092
Alignment:
Q  206 gagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttattt 271  Q
    |||| ||||||||||| | ||||||| ||||||| ||||| | |||||||||||||||||||||||    
T  779027 gagattgtttgaaagaacttacgaaaacaacttatgacatgttcataagttgttttcatcttattt 779092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 6950451 - 6950350
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||||| ||||| || |||||||| ||||||  ||||| || | || |||| || ||||| || |||||||||||||| ||||||||| ||||||    
T  6950451 tttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagct 6950352  T
Q  281 ct 282  Q
    ||    
T  6950351 ct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 9700129 - 9700028
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||||||  ||||| ||||||||||||| ||||| ||||| |  |||| ||| ||| ||||| |||||||| |||||||| ||||||| | |||||||    
T  9700129 ttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttcaccttattttcataagctc 9700030  T
Q  282 tc 283  Q
    ||    
T  9700029 tc 9700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 11569399 - 11569520
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||||| ||| ||||| ||||||||||||||||| | ||||| || | || || |||| ||||| | ||||||||||||||| ||||||| |  || |||    
T  11569399 ttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctc 11569498  T
Q  282 tccaagacagcttataaaaaca 303  Q
    |||| || ||||||| ||||||    
T  11569499 tccatgatagcttatgaaaaca 11569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 1561405 - 1561325
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttc 262  Q
    ||||||| || ||||| ||||||||||| ||||||| |||||  || ||| ||||||| || |||||||||||||||||||    
T  1561405 ttatctaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgttttc 1561325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 28769282 - 28769402
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||||| ||||||||||||||||| | ||||| ||||| |  | ||  | | || || || ||||||||||||||||| ||||||||| ||| ||||    
T  28769282 tatctactggcataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtccataagttgttttcagcttatttccataaactct 28769381  T
Q  283 ccaagacagcttataaaaaca 303  Q
    |||| | ||||||| ||||||    
T  28769382 ccaaaatagcttatgaaaaca 28769402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 8535992 - 8536031
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  8535992 tgaatttatctactgacataagtacttgtgagactgtttg 8536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 13652345 - 13652218
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgaca-tatccataagttgttttcatcttatttccttaagc 279  Q
    |||||||||| |||||||||||||||||  |||||| |||||| || | |  ||| |||  ||| |  | ||||| |||||||  |||||||||||||||    
T  13652345 tttatctactcacataagcacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagc 13652246  T
Q  280 tctccaagacagcttataaaaacaattt 307  Q
    ||||||  | ||||||||||||||||||    
T  13652245 tctccagaatagcttataaaaacaattt 13652218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 13710988 - 13710861
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgaca-tatccataagttgttttcatcttatttccttaagc 279  Q
    |||||||||| |||||||||||||||||  |||||| |||||| || | |  ||| |||  ||| |  | ||||| |||||||  |||||||||||||||    
T  13710988 tttatctactcacataagcacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagc 13710889  T
Q  280 tctccaagacagcttataaaaacaattt 307  Q
    ||||||  | ||||||||||||||||||    
T  13710888 tctccagaatagcttataaaaacaattt 13710861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 26499849 - 26499815
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagact 211  Q
    |||||||||||||||||||||||||||||||||||    
T  26499849 tgaatttatctactgacataagcacttgtgagact 26499815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 37353115 - 37353153
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaaga 221  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  37353115 tatctactgacataagcacttgtgagactgtttggaaga 37353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 39881769 - 39881819
Alignment:
Q  257 gttttcatcttatttccttaagctctccaagacagcttataaaaacaattt 307  Q
    ||||||| ||||||||| ||||||||||| || ||||||||||||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaacaattt 39881819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 44236764 - 44236886
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    ||||||||||| |||||||||||||||||||||| |  |||  ||| ||||  | || |||||||   | |||||| |||||| ||||||| | ||||||    
T  44236764 tttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaatagctcacgacatgctcttaagttattttcagcttattttcataagct 44236863  T
Q  281 ctccaagacagcttataaaaaca 303  Q
    |||||| | ||||||| ||||||    
T  44236864 ctccaatatagcttatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 778517 - 778396
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 281  Q
    |||| |||||| ||||||||||||||||||||||| |||| | || |||| |||| || ||||  |   ||||||||||||| |||| || | |||||||    
T  778517 ttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaacaacataagacacgtttgtaagttgttttcaacttactttcataagctc 778418  T
Q  282 tccaagacagcttataaaaaca 303  Q
    ||||| |  |||||| ||||||    
T  778417 tccaacaatgcttatgaaaaca 778396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 4055610 - 4055679
Alignment:
Q  234 aacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||||| ||||| |||||||  |||||||| |||||||||||||||||||  ||| ||||||| ||||||    
T  4055610 aacttatgacatgtccataaactgttttcagcttatttccttaagctctctgagatagcttatgaaaaca 4055679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 2487952 - 2487984
Alignment:
Q  184 atctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||||||||||||||||||||||||||    
T  2487952 atctactgacataagcacttgtgagactgtttg 2487984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 30191082 - 30191174
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    |||||||| || ||||||||||||| ||||||||||  ||||| || | || ||||||| ||||| | || || ||||||||| |||||||||    
T  30191082 tttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttcc 30191174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 42215091 - 42215143
Alignment:
Q  249 cataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||    
T  42215091 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 4511156 - 4511065
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttcc 273  Q
    ||||||||||  |||||||||||||||||| || |||||| | || |||| ||||||| |||||  || |||| | ||||||| ||||||||    
T  4511156 ttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctattttcattttatttcc 4511065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 20672824 - 20672757
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaaca 303  Q
    |||| ||||| | |||||| |||||||| ||||||| | ||||||||||| || ||||||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 25869260 - 25869311
Alignment:
Q  234 aacttacgacatatccataagttgttttcatcttatttccttaagctctcca 285  Q
    |||||| ||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  25869260 aacttatgacatgtccataagttgttttcagcttatttccataaactctcca 25869311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 43908650 - 43908792
Alignment:
Q  190 tgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctccaagac 289  Q
    |||||||||||||||||| ||||||||| ||||  || |||| || |||| | | | || ||||| |||||| | | || |||| ||| |||| |||||     
T  43908650 tgacataagcacttgtgaaactgtttgagagagtttaagaaaacagcttatgccgtgtcaataagatgttttaaccctacttccataacctctacaagat 43908749  T
Q  290 agcttataaaaacaattttaactttattttttgttatagaaata 333  Q
    |||||||  |||||| ||| | ||||| ||||||||||||||||    
T  43908750 agcttattgaaacaacttt-attttatcttttgttatagaaata 43908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 14926919 - 14926965
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagagc 223  Q
    |||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  14926919 tgaacttatttactggcataagcacttgtgagactgtttgagagagc 14926965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 24326159 - 24326125
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttg 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  24326159 ttatctactggcataagcacttgtgagactgtttg 24326125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 30389228 - 30389106
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagct 280  Q
    |||| |||||| |||||| ||| |||| ||||||||| ||||| || ||||  | || | ||||| | ||||||||||||||| ||||||| | |||| |    
T  30389228 tttaactactggcataagtactcgtgacactgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagtt 30389129  T
Q  281 ctccaagacagcttataaaaaca 303  Q
    ||| | || ||||||| ||||||    
T  30389128 ctctaggaaagcttatgaaaaca 30389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 40280253 - 40280332
Alignment:
Q  266 ttatttccttaagctctccaagacagcttataaaaacaatttta----actttattttttgttatagaaataacttatat 341  Q
    |||||||| |||||||| | ||| ||||||| ||||||||||||    | ||||| ||||||| ||||||||||||||||    
T  40280253 ttatttccataagctcttctagatagcttatgaaaacaattttactttattttatcttttgttgtagaaataacttatat 40280332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 41336655 - 41336709
Alignment:
Q  250 ataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    |||||||||||||| |||||||||  ||||||||| ||| ||||||| |||||||    
T  41336655 ataagttgttttcagcttatttccgcaagctctcctagatagcttatgaaaacaa 41336709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 2364397 - 2364442
Alignment:
Q  177 tgaatttatctactgacataagcacttgtgagactgtttgaaagag 222  Q
    |||| |||||| |||||||||| ||||||||||||||||| |||||    
T  2364397 tgaacttatcttctgacataagtacttgtgagactgtttggaagag 2364442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 6875275 - 6875328
Alignment:
Q  248 ccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaa 301  Q
    |||||| || |||||| |||||||||||||||||||||||| ||| ||| ||||    
T  6875275 ccataaatttttttcaacttatttccttaagctctccaagatagcatatgaaaa 6875328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 41606857 - 41606946
Alignment:
Q  194 ataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctc 283  Q
    ||||||| |||||| || |||||  |||  |||||||| || |||| ||||| | || |||||||||||| ||||||||| |||||||||    
T  41606857 ataagcatttgtgaaacagtttgggagaaactacgaaaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctc 41606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 43368642 - 43368731
Alignment:
Q  182 ttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttattt 271  Q
    ||||||||| ||||||||| ||||||||||| ||| || ||| || |||| ||||||| ||||| | ||| || | |||||| |||||||    
T  43368642 ttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgttcattagctattttcaacttattt 43368731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 11813048 - 11813168
Alignment:
Q  183 tatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctct 282  Q
    ||||||| ||||||| |||| |||| ||||| ||  ||| | || | || ||| ||| |||||||||||| | |||||||| ||||||||  ||||||||    
T  11813048 tatctaccgacataaacactcgtgaaactgtatgggagaacttatggaaacaatttatgacatatccataggctgttttcagcttatttctgtaagctct 11813147  T
Q  283 ccaagacagcttataaaaaca 303  Q
      |||| ||||||| ||||||    
T  11813148 tgaagatagcttatgaaaaca 11813168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 27158073 - 27158153
Alignment:
Q  192 acataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttc 272  Q
    ||||||||| ||  ||||||||| | ||||| || ||||| ||||||| ||||  ||||||||||||||||| || |||||    
T  27158073 acataagcatttaagagactgttcggaagagtctgcgaaaacaacttatgacacctccataagttgttttcagctcatttc 27158153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 31862603 - 31862520
Alignment:
Q  199 cacttgtgagactgtttgaaagagcctacgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctctc 283  Q
    ||||||| ||||||||||| ||||  |||| || ||||||| ||| ||| |||||| |||||||| ||||||| | |||||||||    
T  31862603 cacttgttagactgtttgagagag-ttacggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctc 31862520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 16184 - 16116
Alignment:
Q  236 cttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaa 304  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| || ||||||||||||||  |||||||    
T  16184 cttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaa 16116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 9868 - 9901
Alignment:
Q  307 ttaactttattttttgttatagaaataacttata 340  Q
    |||| |||||||||||||||||||||||||||||    
T  9868 ttaattttattttttgttatagaaataacttata 9901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 12697 - 12758
Alignment:
Q  233 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagctt 294  Q
    ||||||| ||||| ||||||||||||||||| ||||  ||| ||||||||| |||| |||||    
T  12697 caacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagctt 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 9719 - 9780
Alignment:
Q  181 tttatctactgacataagcacttgtgagactgtttgaaagagcctacgaaaccaacttacga 242  Q
    |||||||||| ||||||  |||||||||||||||||  |||||||| | || ||||||||||    
T  9719 tttatctactaacataaatacttgtgagactgtttgggagagcctatggaaacaacttacga 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 1673 - 1701
Alignment:
Q  189 ctgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||||||||||||||||    
T  1673 ctgacataagcacttgtgagactgtttga 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 3763 - 3791
Alignment:
Q  189 ctgacataagcacttgtgagactgtttga 217  Q
    |||||||||||||||||||||||||||||    
T  3763 ctgacataagcacttgtgagactgtttga 3791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 340
Target Start/End: Original strand, 104232 - 104260
Alignment:
Q  312 tttattttttgttatagaaataacttata 340  Q
    |||||||||||||||||||||||||||||    
T  104232 tttattttttgttatagaaataacttata 104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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