View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9529_low_15 (Length: 254)
Name: NF9529_low_15
Description: NF9529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9529_low_15 |
 | |
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| [»] chr1 (7 HSPs) |
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| [»] chr3 (9 HSPs) |
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| [»] chr6 (6 HSPs) |
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| [»] chr4 (6 HSPs) |
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| [»] scaffold0067 (1 HSPs) |
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| [»] chr7 (7 HSPs) |
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| [»] chr2 (5 HSPs) |
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| [»] chr8 (8 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] scaffold0175 (1 HSPs) |
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| [»] scaffold0012 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 24200892 - 24201145
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24200892 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgaattttgcttcgtgccacg |
24200991 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24200992 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
24201091 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24201092 |
tctcagtttcgtcttttgagctcttgttcctgttttggtctgatttcaccatga |
24201145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16839585 - 16839838
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16839585 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggccgcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
16839684 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
16839685 |
aaatttccagtgctgaacctttgtcccacgttcacttattgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
16839784 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
16839785 |
tctcagttccgtcttttgagctcctgttcctgttttgatctgatttcaccatga |
16839838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16849515 - 16849768
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16849515 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggccgcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
16849614 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
16849615 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
16849714 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
16849715 |
tctcagttccgtcttttgagctcctgttcctgttttgatctgatttcaccatga |
16849768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 20980825 - 20980570
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20980825 |
ccacgatacgatccaatcgtggcacgattgcttcactaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcatattgcttcgtgccacg |
20980726 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
20980725 |
aaatttccagcgctgaatcctttgtcccacgttcacatatcgtgccacgaacaagcttcatcgtggcacgattcttcactcataggaatttttcatcttt |
20980626 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
20980625 |
ttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatga |
20980570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 20963922 - 20963667
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||| || ||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
20963922 |
ccacgatacgatccaatcatggcacgattgcttcactaatcctacgtggaagcagacaaaacctagcatcgtggcacgttgcatattgctttgtgccacg |
20963823 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||| ||| ||||||||| | |||||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
20963822 |
aaatttccagcgctgaatcctttgtcccacgttcagatatcgtgccacgagcaagcttcatcgtggcacaattcttcactcataggaatttttcatcttt |
20963723 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| || |||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
20963722 |
ttctcagtttcttctcttcgagctcttgttcctgttttggtctgatttaaccatga |
20963667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 17903441 - 17903695
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||| ||||||||||| || |||||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17903441 |
ccacgttacgatccaaccgtggcacgatggcttcattaatcctacgtggccgcagataaaacctagcatcgtggcacgttgcatgttgcttcgtgccacg |
17903540 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgatt-cttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
| |||||||||| | |||||||||||| |||| |||| ||||||||| | ||||| ||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
17903541 |
atctttccagtgcaaatcctttgtcccacgttcaattatcgtgccacgagaaaccttcaatgtggcacgattgcttcactcttaggaatttttcatcttt |
17903640 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
| ||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
17903641 |
tcctcag-ttcttctctttgagcttttgttcctgttttagtctgatttcaccatga |
17903695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 28917838 - 28917588
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||| | |||||||||||||||| | |||||||||||| |
|
|
| T |
28917838 |
ccacgttacgatccaatcgtggcacgatgacttcattaatcctacgtggcagcagacaaaatccctcatcgtggcacgttgcatatcgcttcgtgccaca |
28917739 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattc-acttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||| ||| | |||| | ||||||||| ||| | ||| |||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28917738 |
aaattttcagcggtgaaaccttgtcccacgttcttcatatcgtgccacgaaatatcctcaacgtggcacgattcttgactcttaggaatttttcatcttt |
28917639 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcac |
249 |
Q |
| |
|
|||||| ||| ||| ||||||||| | |||||||||||| |||||||||| |
|
|
| T |
28917638 |
ttctcaacttcttctctttgagctcctattcctgttttggcctgatttcac |
28917588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 29234241 - 29234493
Alignment:
| Q |
2 |
cacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacga |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
29234241 |
cacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgttttgctttgtgccacga |
29234340 |
T |
|
| Q |
102 |
aatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttttt |
201 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
29234341 |
aatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtgccacgattcttaactcttaggaatttttcatcttttt |
29234440 |
T |
|
| Q |
202 |
ctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29234441 |
ctcagtttcgtcttttgagctcttgttcctgttttggtctgatttcaccatga |
29234493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16415405 - 16415658
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
16415405 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttccattttgcttcgtgccacg |
16415504 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16415505 |
aaatttccagtgctgaaactttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
16415604 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16415605 |
tctcagtttcgtctttttagctcttgttcctgttttggtctgatttcaccatga |
16415658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 18516379 - 18516632
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
18516379 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttccattttgcttcgtgccacg |
18516478 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18516479 |
aaatttccagtgctgaaactttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
18516578 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18516579 |
tctcagtttcgtctttttagctcttgttcctgttttggtctgatttcaccatga |
18516632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16315239 - 16315492
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
16315239 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcatggcacgttgcattttgcttcgtgccacg |
16315338 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16315339 |
aaatttccagtgctgaacctttgtctcacgttcacttatcgtgccacgaaccagcttcattgtggcacgattcttaactcttaggaatttttcatcattt |
16315438 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16315439 |
tctcagtttcgtcttttgagctcttgttcctgttttggtctgatttcaccatga |
16315492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 18496233 - 18496486
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
18496233 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcatggcacgttgcattttgcttcgtgccacg |
18496332 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18496333 |
aaatttccagtgctgaacctttgtctcacgttcacttatcgtgccacgaaccagcttcattgtggcacgattcttaactcttaggaatttttcatcattt |
18496432 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18496433 |
tctcagtttcgtcttttgagctcttgttcctgttttggtctgatttcaccatga |
18496486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 23375380 - 23375632
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
23375380 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatt-gcttcgtgccacg |
23375478 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23375479 |
aaatttccagtgctgaacctatgtcccacgttcacttatcgtgccacgaacaagcttcatcgtggcacgactcttaactcttaggaatttttcatctttt |
23375578 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23375579 |
tctcagtttcgtcttttgagctcctgttcctgttttggtctgatttcaccatga |
23375632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 5897619 - 5897872
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5897619 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
5897718 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
5897719 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
5897818 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
5897819 |
tctcagttcggtcttttgagctcctgttcctgttttgatctgatttcaccatga |
5897872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 5887635 - 5887888
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
5887635 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggaacgttgcgatttacttcgtgccacg |
5887734 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
5887735 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
5887834 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| | |||||||||||||| |
|
|
| T |
5887835 |
tctcagttccgtcttttgagctcctgttcctgttttgatatgatttcaccatga |
5887888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 6174004 - 6174259
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| |||| ||||||| | |||| |
|
|
| T |
6174004 |
ccacgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaaacctagcattatggcacattgcatattgcttcataacacg |
6174103 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||||||| |||||| |||||||||||| |||| | ||||||||||| ||||||||| ||||||||| ||| |||||||||||||||| |||||| |
|
|
| T |
6174104 |
aaatttccagcgctgaatcctttgtcccacgttcaaatgccgtgccacgaacaagcttcatcatggcacgatgcttcactcttaggaatttttaatcttt |
6174203 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
6174204 |
ttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatga |
6174259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 22919995 - 22919742
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
22919995 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcactttgcattttgcttcgtgccacg |
22919896 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22919895 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
22919796 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22919795 |
tctcagtttcgtcagttgagctcttgttcctgttttggtctgatttcaccatga |
22919742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 17231322 - 17231065
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||| ||||||||||| | || | | |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
17231322 |
ccacgttacgatcctatcgtggcacgttggctttactaatcctacgtggcagcagagaaaacctagcatcgtggcacattgcatattgcttcgtgccacg |
17231223 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaa--tttttcatct |
197 |
Q |
| |
|
|||||||||||| |||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||| | |||| ||| ||||||||||| |||||||||| |
|
|
| T |
17231222 |
aaatttccagtgttgaagcctttgttccacgttcacatatcgtgccacgaacaagcttcatcgtcgtgcgatgcttcactcttaggaatttttttcatct |
17231123 |
T |
|
| Q |
198 |
ttttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17231122 |
ttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttcaccatga |
17231065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 17696052 - 17695943
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
17696052 |
ccacgttacgatccaatcgtggcacgatgacatcattaatcctacgtggcagcagacaaaacctagcatcg-ggcacgttacatgttgcttcgtgccacg |
17695954 |
T |
|
| Q |
101 |
aaatttccagt |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
17695953 |
aaatttccagt |
17695943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 31122751 - 31122637
Alignment:
| Q |
141 |
gtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaat-ttttcatctttttctcagtttcgtcttttgagctcatgttcctgttttggt |
239 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||| || ||||||||| |||||||||||| ||| |||| ||||||| |||| ||||||| ||||| | |
|
|
| T |
31122751 |
gtgccacgaaccttcttcaacgtggcacgattcttcacacttaggaatattttcatcttttcatcaatttcttcttttgggctcttgttcctattttgat |
31122652 |
T |
|
| Q |
240 |
ctgatttcaccatga |
254 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
31122651 |
atgattttaccatga |
31122637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31122893 - 31122816
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacg |
78 |
Q |
| |
|
||||| ||||||||||||||||||| || | |||||||||||||| || |||||| |||||||||||||||| |||| |
|
|
| T |
31122893 |
ccacgttacgatccaatcgtggcacaattacttcattaatcctacgaggtagtagataaaacctagcatcgtgacacg |
31122816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 17695910 - 17695819
Alignment:
| Q |
165 |
gcacgattcttaactcttaggaatttttc--atctttttctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||| ||| ||||||||| | ||||| ||||||| |||||| ||| |||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
17695910 |
gcacgatgcttcactcttaggcaattttcctatcttttcaccagtttattctcttgagctcttgtttctgttttggtctaatttcaccatga |
17695819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 49637175 - 49637428
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49637175 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
49637274 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
49637275 |
aaatatccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
49637374 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
49637375 |
tctcagtttcgtcttttgagctcctgttcctgttttgatctgatttcaccatga |
49637428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 3733780 - 3733527
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3733780 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
3733681 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
3733680 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
3733581 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| | |||||||||||||| |
|
|
| T |
3733580 |
tctcagttccgtcttttgagctcctgttcctgttttgatatgatttcaccatga |
3733527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 49640468 - 49640721
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
49640468 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacccagcatcgtggcacgttgcgatttgcttcgtgccacg |
49640567 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
49640568 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
49640667 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
49640668 |
tctcagtttcgttttttgagctcctgttcctgttttgatctgatttcaccatga |
49640721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 3720149 - 3720403
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3720149 |
ccacgatacgatccaatcgtggcacaatagcttcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcattttgcttcgtgccacg |
3720248 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
3720249 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaacaagcttcattgtggcacgatgctttactcttagtaatttttcatctttt |
3720348 |
T |
|
| Q |
201 |
tctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3720349 |
tctcagtttcgtctctttgagctcttgttcctgttttggtctgatttcaccatga |
3720403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 14701371 - 14701115
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| | |
|
|
| T |
14701371 |
ccacgatacgatccaatcgtggcacgattgcttcactaatcctacgtggcagcagacaaaacctagcatcgtggcacgttacatattgcttcgtgccatg |
14701272 |
T |
|
| Q |
101 |
aaatttccagtgct-gaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaa-tttttcatctt |
198 |
Q |
| |
|
|||| |||| ||| |||||||||||||| ||||| || ||||||||||| |||| |||||||||||| | ||| |||||| |||| ||||||||||| |
|
|
| T |
14701271 |
aaatgtccaacgctcaaacctttgtcccacgttcacctaccgtgccacgaacaagctccatcgtggcacgctgcttcactcttgggaattttttcatctt |
14701172 |
T |
|
| Q |
199 |
tttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
14701171 |
tttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatga |
14701115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 23652764 - 23652509
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| || |||| |||||||||||||| | || ||||||||| ||||||| |||||||||||||||||||| |||||| | |||||||| ||| |
|
|
| T |
23652764 |
ccacgttatgatctaatcgtggcacgatcacttcgttaatcctatgtggcagcagacaaaacctagcatcgtgacacgtttcataaaccttcgtgcaacg |
23652665 |
T |
|
| Q |
101 |
aaatttccagtgctgaaccttt-gtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||| ||||| |||| ||| ||||||| ||||| ||||||||||||| | | ||| | ||||||||| ||||| ||||||||||||||||| || |
|
|
| T |
23652664 |
aaattttcagtgatgaatattttgtcccacgttcacatattgtgccacgagctatctttaacgtggcacggttcttcactcttaggaatttttccatttc |
23652565 |
T |
|
| Q |
200 |
ttctc-agtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||| | | |||| ||||||| |||| | ||||||||||| |||||||||||||||| |
|
|
| T |
23652564 |
ttcacaattttcttcttttgggctctttttcctgttttgatctgatttcaccatga |
23652509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 26828 - 26575
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26828 |
ccacgatacggtccaatcgtggcacgatagcatcattaaacctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacg |
26729 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26728 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttt |
26629 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
26628 |
tctgagtttcgtcttttgagctcttgttcctgtttcggtctgatttcaccatga |
26575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 2251338 - 2251085
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| || |
|
|
| T |
2251338 |
ccacgatacgatccaatcatggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacattgcattttgcttcgtgccgcg |
2251239 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2251238 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagctttatcgtggcacgattcttaactcttaggaatttttcatctttt |
2251139 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
2251138 |
tctcagtttcgtcttttgagctcttgttcctgttttggtctgatttcactatga |
2251085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 26459932 - 26459679
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26459932 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
26459833 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
26459832 |
aaatttccagtgctgaacctttgttccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
26459733 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||| |||||||||||||||| |
|
|
| T |
26459732 |
tctcagtttcgtcttttgagctcctgctcctgttttgatctgatttcaccatga |
26459679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 23599414 - 23599668
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
23599414 |
ccacgatacggtccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaaacctagcattgtggcacgttgcattttgcttcgtgccacg |
23599513 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23599514 |
aaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaacaagcttcattgtggcacgatgcttaactcttaggaatttttcatctttt |
23599613 |
T |
|
| Q |
201 |
tctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23599614 |
tctcagtttcgtctctttgagctcttgttcctgttttggtctgatttcaccatga |
23599668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 710670 - 710926
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| || || ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
710670 |
ccacgatacgatccaatcgtggcatgattgctccactaatcctacgtggcaacagacaaaacctagcatcgtggcacgttacatattgcttcgtgccaca |
710769 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaa--tttttcatctt |
198 |
Q |
| |
|
|||||| ||| ||| || | ||||||||| ||||| ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
710770 |
aaattttcagcgctcaaaccttgtcccacgttcacctatcgtgccacgaacaagctccatcgtggcacgatgcttcactcttaggaatttttttcatctt |
710869 |
T |
|
| Q |
199 |
tttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||||||||||||||||| |||| ||||||| |
|
|
| T |
710870 |
tttctcagtttcttctctttgagctcttgttcctgttttggtctaatttaaccatga |
710926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 254
Target Start/End: Original strand, 748701 - 748950
Alignment:
| Q |
7 |
tacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaattt |
106 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
748701 |
tacgatccaatcgtggcacgatggcttcattaatcctacgtgacagcagacaaaacctagcatcgtagcacgttgcatattgcttcttgccacgaaattt |
748800 |
T |
|
| Q |
107 |
ccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctca |
205 |
Q |
| |
|
||||||||||| |||||||||||| |||| |||||||||||||| | ||| | ||||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
748801 |
ccagtgctgaatcctttgtcccacgttcaaatattgtgccacgaagtacctttgacatggcacgatgcttcactcttaggaaattttcatctttttctca |
748900 |
T |
|
| Q |
206 |
gtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||| ||| ||||| ||| ||||| | |||||||||||||||||||||| |
|
|
| T |
748901 |
gtttcttctgtttgaactcttgttcttattttggtctgatttcaccatga |
748950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 2348939 - 2348684
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||| |||||||| ||| || |||||||| ||||||||||| |||||||| || |||||| | ||| |||| ||||||||||||||| |
|
|
| T |
2348939 |
ccacgttacgatcccatcgtggcgtgatggcttcattaattctacgtggcagcagacaaaatctcgcatcgcgacacattgcatattgcttcgtgccacg |
2348840 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| | ||| ||| |||||| | ||||| ||||||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
2348839 |
aaatttccagtgctgaatcctttgtcccacgttctcatatcgtgacacgaagtaccttcaacgtggcacgatgcttcactcttaagaatttttcatcttt |
2348740 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2348739 |
ttctcagtttcttctctttgagctcttgttcctgttttggtctgatttcaccatga |
2348684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 20100112 - 20099858
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||| ||| || ||| || ||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
20100112 |
ccacgttacgatccaatcgtggcatgatggcttcactattcctacgtggcagcagacaaaatctagcatcatggcacgttgcacattgcttcgtgccacg |
20100013 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaattttt-catctt |
198 |
Q |
| |
|
||| ||||||||||||| |||||||||||| |||| ||| |||||| |||| ||||||| ||||||||||| ||| |||||| | ||||||| |||||| |
|
|
| T |
20100012 |
aaaattccagtgctgaatcctttgtcccacgttcaaatatcgtgccatgaactagcttcaacgtggcacgatgcttcactcttcgaaatttttccatctt |
20099913 |
T |
|
| Q |
199 |
tttctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||| || || ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
20099912 |
tttctcaattctctc-tttgagctcttgttcctgttttggtctgatttcaccatga |
20099858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 18938361 - 18938108
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18938361 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
18938262 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
18938261 |
aaatttccagagctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttt |
18938162 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
18938161 |
tctcagttccgtcttttgagctcctgttcctgttttgatctgatttcaccatga |
18938108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 18011414 - 18011159
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||| ||| || |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||| ||| |
|
|
| T |
18011414 |
ccacgttacgatccaatcgtggcaagatggcttcattaatcctatgtggcagcagacaaaacctagcatcgtggcacgttgcatattgctttgtgctacg |
18011315 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttc-atcgtggcacgattcttaactcttaggaatttttcatctt |
198 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||| | ||||||||||||| | || | | ||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
18011314 |
aaatttccagtgttgaatcctttgtcccatgttctcatattgtgccacgatata-ctacaaacgtggcacgattctttacttttaggaatttttcatctt |
18011216 |
T |
|
| Q |
199 |
tttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||||||| ||||||| |||| ||||||||| |
|
|
| T |
18011215 |
tttctcagtttcttctctttgagctcttgttcctattttggtttgatgtcaccatga |
18011159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 22591980 - 22591722
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||||| ||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22591980 |
ccacgatgtgatccaatcgtggcacgattcctccattagtcctacgtggcagcagacaaaacctagcatcgtggcacgttgcatattgcttcgtgccacg |
22591881 |
T |
|
| Q |
101 |
aaatttccagtgc-tgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttagga----atttttcat |
195 |
Q |
| |
|
||||||||||||| | |||| ||||||||| |||| || ||||||||| | |||| |||||||||||||| ||| |||||| ||| |||||||| |
|
|
| T |
22591880 |
aaatttccagtgcatcaacc-ttgtcccacgttcatcgatcgtgccacgagcaagctccatcgtggcacgatgcttcactcttgggagtttttttttcat |
22591782 |
T |
|
| Q |
196 |
ctttttctcagtttcgt-cttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||| | | ||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
22591781 |
ctttttctcagtttcttccctttgagctcttgttcctgttttggtctgatttaaccatga |
22591722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2648998 - 2649057
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaa |
60 |
Q |
| |
|
||||| ||||||||||||||| |||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
2648998 |
ccacgttacgatccaatcgtgacacgatcacctcattaatcctacgtggcagcagacaaa |
2649057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 2649159 - 2649253
Alignment:
| Q |
161 |
cgtggcacgattcttaactcttaggaatttttc-atctttttctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| ||||||||| ||||||| ||||||| ||| |||| || || ||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
2649159 |
cgtggcacgatgcttcactcttaggcatttttcaatcttttcatcaatttctcctcttaagctcttgttactgttttgatctgatttcactatga |
2649253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 24434497 - 24434245
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24434497 |
ccacgatacggtccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacg |
24434398 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||| ||||||||||||||| ||||||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24434397 |
aaacttccagtgctgaacc-ttgtcccacgttcgcttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttt |
24434299 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
24434298 |
tctcagttttgtcttttgagctcctgttcctgttttggtctgctttcaccatga |
24434245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 24444543 - 24444291
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24444543 |
ccacgatacggtccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacg |
24444444 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||| ||||||||||||||| ||||||||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24444443 |
aaacttccagtgctgaacc-ttgtcccacgttcgcttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttt |
24444345 |
T |
|
| Q |
201 |
tctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
24444344 |
tctcagtttcgtcttttgagctcctgttcatgttttggtctgctttcaccatga |
24444291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 5 - 254
Target Start/End: Original strand, 17013688 - 17013937
Alignment:
| Q |
5 |
gatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaat |
104 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
17013688 |
gatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaaacctagcatcgtggtacgttgcattttgcttcgtgccacgaaat |
17013787 |
T |
|
| Q |
105 |
ttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctc |
204 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| |
|
|
| T |
17013788 |
ttccagtgctgaacc-ttgtcccacgttcacttatcgtgccacaaacaagcttcatcgtggcacgatgcttcactcttaggaattcttcatcttttactc |
17013886 |
T |
|
| Q |
205 |
agtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||| |||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
17013887 |
agtttcgtctctttgagatcttgttcctgttttggtctgatttcaccatga |
17013937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 5 - 254
Target Start/End: Complemental strand, 17543513 - 17543264
Alignment:
| Q |
5 |
gatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaat |
104 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
17543513 |
gatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaaacctagcatcgtggtacgttgcattttgcttcgtgccacgaaat |
17543414 |
T |
|
| Q |
105 |
ttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctc |
204 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| |
|
|
| T |
17543413 |
ttccagtgctgaacc-ttgtcccacgttcacttatcgtgccacaaacaagcttcatcgtggcacgatgcttcactcttaggaattcttcatcttttactc |
17543315 |
T |
|
| Q |
205 |
agtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||| |||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
17543314 |
agtttcgtctctttgagatcttgttcctgttttggtctgatttcaccatga |
17543264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24904136 - 24904384
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||| |||||||| ||||||| ||||||||||||||||||||||||||| | || |||| ||||||| |
|
|
| T |
24904136 |
ccacgatacgatccaatcgtggcacgattgcttcactaatcctatgtggcagcagacaaaacctagcatcgtggcacgttacatattacttcatgccacg |
24904235 |
T |
|
| Q |
101 |
aaatttccagtgct-gaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaa-tttttcatctt |
198 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||| ||| ||||||||||| |||| |||||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
24904236 |
aaatttccagcgctcaaacctttgtcccacgttcacctatcgtgccacgaacaagctccatcgtggcacgatgattcactcttaggaattttttcatctt |
24904335 |
T |
|
| Q |
199 |
tttctcagtttcgtct-tttgagctcatgttcctgttttggtctgattt |
246 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
24904336 |
tttctcagtttcttctctttgagctcttgttcctgttttggtctgattt |
24904384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 27864206 - 27864458
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| | ||||||||||||||| |||||| |||||||| |
|
|
| T |
27864206 |
ccacgttacgatccaatcgtggcacgatgccttcattaatcctacgtggcagcacacaaaacctcgtatcgtggcacgttgcatattgctttgtgccacg |
27864305 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
||||||||||||||||| | |||||||||| ||| | ||| ||||||||| | | || | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
27864306 |
aaatttccagtgctgaatcatttgtcccacgttctcgtatcgtgccacgatctactttaaacgtggcacaattcttcactcttaggaatttttcatcttt |
27864405 |
T |
|
| Q |
200 |
ttctcagtttcgtcttttgagctcatgttcctgttttggtctgatttcaccat |
252 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
27864406 |
ttctcagtttcttctcttgagctcttgttcctattttggtctgatttcaccat |
27864458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 31392365 - 31392554
Alignment:
| Q |
67 |
catcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacattc-acttattgtgccacgaaccagcttcatcgtgg |
165 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||||||||| |||||| | ||||||||| ||| | ||||| |||||||| | | ||| | ||| |
|
|
| T |
31392365 |
catcgtgccacgttgcatattgcttcgtgccacaaaatttccagcgctgaaaccttgtcccacgttcttcatattgagccacgaaatatcctcaacatgg |
31392464 |
T |
|
| Q |
166 |
cacgattcttaactcttaggaatttttcatctttttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||| | || ||||| | ||||||||||||||||||| ||| ||| ||| || || | |||||||||||| || || ||||||||| |
|
|
| T |
31392465 |
cacgattcgtgacgcttagaactttttcatctttttctcagcttcttctctttcaggtcttattcctgttttggccttatgtcaccatga |
31392554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 27234497 - 27234361
Alignment:
| Q |
118 |
cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctc-agtttcgtcttt |
216 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||| | | | ||| | ||||||||||||||| ||||||||||||||||| || ||| | | |||| ||||| |
|
|
| T |
27234497 |
cctttgtcccacgttcacatatcgtgccacaagctatcttaaacgtggcacgattcttcactcttaggaatttttccatttcttcacaattttcttcttt |
27234398 |
T |
|
| Q |
217 |
tgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|| |||| ||||||||||||| ||| |||||||||||| |
|
|
| T |
27234397 |
tgggctcttgttcctgttttgatct-atttcaccatga |
27234361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 26726412 - 26726158
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26726412 |
ccacgatatgatccaaacgtggcacgatagcttcattaatcccacatggcagcagacaaaacctagcatcgtggcacgttgcattttgcttcgtgccacg |
26726313 |
T |
|
| Q |
101 |
aaatttccagtgctgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
26726312 |
aaatttccagtgctgaacctttgtcccacgttaacttatcgtgccacgaacaagcttcatcgtggcaccatgcttaactcttaggaatttttcatctttt |
26726213 |
T |
|
| Q |
201 |
tctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
26726212 |
tctcagtttcgtctctttgagctcttgttccttttttggtctgatttcaccatga |
26726158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 4732474 - 4732729
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||| |||||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
4732474 |
ccacgttacgatccaatcgtggcacgatggcttcattaatcctaagtggcagcagacaaaacctagcatcgtggcacgttgcatattgcttcgtgccatg |
4732573 |
T |
|
| Q |
101 |
aaatttccagtgctgaa-cctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
|||||||||||| |||| |||||||||||| ||| ||| ||||||||||| | ||||| ||||||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
4732574 |
aaatttccagtgttgaatcctttgtcccacgttcgactatcgtgccacgaactaccttcaacgtggcacgatgcttcactcttataaatttttcatcttt |
4732673 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| ||||| ||| |||||||||||| ||||||||||||||||| |
|
|
| T |
4732674 |
ttctcagtttcttctctttgaactcttgttcctgttttagtctgatttcaccatga |
4732729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25184848 - 25184789
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaa |
60 |
Q |
| |
|
||||| |||||||||||| ||||||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
25184848 |
ccacgttacgatccaatcatggcacgatcacttcattaatcctacgtggcagcagacaaa |
25184789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 29313 - 29567
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
29313 |
ccacgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcattttgcttcgtgccacg |
29412 |
T |
|
| Q |
101 |
aaatttccagtgc-tgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatcttt |
199 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
29413 |
aaatttccagtgcaaaaacctttgtcccacgttc-cttatcgtgccacgaacaagcttcatcgtggcacgatgcttcactcttaggaacttttcatcttt |
29511 |
T |
|
| Q |
200 |
ttctcagtttcgtct-tttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
||||||||||| ||| |||||| | ||||||| |||||||||||||| ||||||| |
|
|
| T |
29512 |
ttctcagtttcttctcattgagcacttgttcctattttggtctgatttaaccatga |
29567 |
T |
|
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Target: scaffold0012 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 31718 - 31973
Alignment:
| Q |
1 |
ccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagtagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacg |
100 |
Q |
| |
|
||||||| |||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31718 |
ccacgatgcgatccaatcgtggcacgattcctccattagtcttacgtggcagcagacaaaacctagcatcgtggcacgttgcatattgcttcgtgccacg |
31817 |
T |
|
| Q |
101 |
aaatttccagtgc-tgaacctttgtcccacattcacttattgtgccacgaaccagcttcatcgtggcacgattcttaactcttagga-atttttcatctt |
198 |
Q |
| |
|
||||||||||||| | |||| ||||||||| ||| | ||| ||||||||| | |||| ||||||| |||||| ||| || ||| ||| ||||||||||| |
|
|
| T |
31818 |
aaatttccagtgcatcaacc-ttgtcccacgttcccctatcgtgccacgagcaagctccatcgtgccacgatgcttcacacttgggagttttttcatctt |
31916 |
T |
|
| Q |
199 |
tttctcagtttcgt-cttttgagctcatgttcctgttttggtctgatttcaccatga |
254 |
Q |
| |
|
|||||||||||| | | ||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
31917 |
tttctcagtttcttccctttgagctcttgttcctgttttggtctgatttaaccatga |
31973 |
T |
|
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