View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9529_low_2 (Length: 511)

Name: NF9529_low_2
Description: NF9529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9529_low_2
NF9529_low_2
[»] chr3 (39 HSPs)
chr3 (14-496)||(21872249-21872731)
chr3 (356-424)||(48397598-48397666)
chr3 (357-432)||(1816536-1816611)
chr3 (349-432)||(24887325-24887408)
chr3 (371-424)||(42084301-42084354)
chr3 (434-490)||(24624264-24624320)
chr3 (339-443)||(40122784-40122887)
chr3 (370-454)||(48364899-48364983)
chr3 (349-432)||(14145857-14145940)
chr3 (370-433)||(32555022-32555085)
chr3 (370-420)||(44061077-44061127)
chr3 (397-490)||(2100139-2100232)
chr3 (370-426)||(23315592-23315648)
chr3 (370-437)||(2201094-2201161)
chr3 (370-425)||(31337450-31337505)
chr3 (370-429)||(36646427-36646486)
chr3 (370-432)||(30956668-30956730)
chr3 (370-432)||(30972480-30972542)
chr3 (373-427)||(33405214-33405268)
chr3 (370-428)||(38462247-38462305)
chr3 (388-426)||(41057022-41057060)
chr3 (382-432)||(43875626-43875676)
chr3 (371-424)||(3467438-3467491)
chr3 (370-423)||(10101527-10101580)
chr3 (370-423)||(10212452-10212505)
chr3 (372-437)||(19679365-19679430)
chr3 (370-426)||(21865544-21865598)
chr3 (388-429)||(22214704-22214745)
chr3 (382-427)||(23249536-23249581)
chr3 (370-427)||(27792838-27792895)
chr3 (373-426)||(28306127-28306180)
chr3 (343-408)||(32703077-32703142)
chr3 (300-332)||(4534499-4534531)
chr3 (374-426)||(10540540-10540592)
chr3 (370-426)||(24235731-24235787)
chr3 (292-324)||(28801137-28801169)
chr3 (370-426)||(36783382-36783438)
chr3 (370-426)||(37788826-37788882)
chr3 (370-398)||(52323950-52323978)
[»] chr8 (40 HSPs)
chr8 (370-496)||(34770858-34770984)
chr8 (370-432)||(6509345-6509407)
chr8 (370-496)||(31915247-31915373)
chr8 (349-437)||(1470893-1470981)
chr8 (339-423)||(42597336-42597420)
chr8 (383-430)||(1561253-1561300)
chr8 (383-430)||(2091740-2091787)
chr8 (384-427)||(9834836-9834879)
chr8 (371-426)||(11376670-11376725)
chr8 (443-490)||(39881681-39881728)
chr8 (343-429)||(4558737-4558823)
chr8 (373-443)||(29973050-29973120)
chr8 (382-435)||(7645956-7646009)
chr8 (370-430)||(2093245-2093305)
chr8 (370-422)||(12361158-12361210)
chr8 (294-338)||(31167859-31167903)
chr8 (370-469)||(4763884-4763983)
chr8 (403-458)||(9912805-9912860)
chr8 (386-437)||(31884576-31884627)
chr8 (301-387)||(40356767-40356854)
chr8 (372-430)||(10474210-10474267)
chr8 (374-424)||(11059745-11059794)
chr8 (438-496)||(21130670-21130728)
chr8 (361-419)||(29262929-29262987)
chr8 (370-432)||(29592574-29592636)
chr8 (370-427)||(787153-787210)
chr8 (437-490)||(7714299-7714352)
chr8 (382-427)||(8062502-8062547)
chr8 (370-427)||(10437851-10437907)
chr8 (439-488)||(14949925-14949974)
chr8 (370-427)||(28784842-28784899)
chr8 (370-443)||(38537557-38537630)
chr8 (370-427)||(41336692-41336749)
chr8 (301-392)||(42568711-42568801)
chr8 (373-409)||(7878551-7878587)
chr8 (339-427)||(13561359-13561447)
chr8 (371-427)||(16210933-16210989)
chr8 (382-430)||(30013196-30013244)
chr8 (370-422)||(35374425-35374477)
chr8 (375-427)||(37461113-37461165)
[»] chr4 (52 HSPs)
chr4 (343-496)||(32920377-32920529)
chr4 (347-432)||(10192227-10192312)
chr4 (369-463)||(1408307-1408401)
chr4 (370-432)||(2996539-2996601)
chr4 (370-496)||(3549509-3549635)
chr4 (370-427)||(51630077-51630134)
chr4 (344-425)||(55870390-55870471)
chr4 (342-437)||(8422876-8422969)
chr4 (370-425)||(13949893-13949948)
chr4 (372-427)||(49219107-49219162)
chr4 (342-428)||(18630618-18630704)
chr4 (349-456)||(29373903-29374012)
chr4 (343-437)||(35958594-35958688)
chr4 (383-429)||(42866047-42866093)
chr4 (370-435)||(927442-927507)
chr4 (372-425)||(29778763-29778816)
chr4 (339-408)||(30024635-30024704)
chr4 (383-432)||(35517175-35517224)
chr4 (443-496)||(50298579-50298631)
chr4 (370-443)||(54325068-54325141)
chr4 (370-430)||(3175917-3175977)
chr4 (370-426)||(4071848-4071904)
chr4 (370-454)||(7730590-7730674)
chr4 (370-486)||(19429476-19429592)
chr4 (375-443)||(24091434-24091502)
chr4 (448-496)||(25497624-25497672)
chr4 (356-428)||(43372015-43372087)
chr4 (437-496)||(8328073-8328132)
chr4 (370-429)||(24370998-24371057)
chr4 (371-430)||(29263337-29263396)
chr4 (373-426)||(7368103-7368157)
chr4 (303-337)||(7730513-7730547)
chr4 (391-433)||(9841053-9841095)
chr4 (383-425)||(30207620-30207662)
chr4 (343-417)||(42321936-42322010)
chr4 (349-394)||(1404367-1404412)
chr4 (382-443)||(7694041-7694102)
chr4 (370-415)||(11917525-11917570)
chr4 (354-406)||(19429681-19429731)
chr4 (439-488)||(23819148-23819197)
chr4 (308-424)||(24160545-24160662)
chr4 (370-427)||(25885825-25885882)
chr4 (364-409)||(31038932-31038977)
chr4 (370-427)||(47119012-47119069)
chr4 (443-496)||(52172788-52172841)
chr4 (370-423)||(53626742-53626795)
chr4 (370-426)||(437480-437536)
chr4 (370-426)||(11802500-11802556)
chr4 (370-426)||(17884034-17884090)
chr4 (373-409)||(21952930-21952966)
chr4 (341-421)||(22471268-22471348)
chr4 (370-426)||(42685390-42685446)
[»] chr5 (31 HSPs)
chr5 (370-496)||(38047833-38047959)
chr5 (343-435)||(35960353-35960444)
chr5 (370-432)||(14295472-14295534)
chr5 (371-427)||(34205206-34205262)
chr5 (371-483)||(42646882-42646994)
chr5 (370-437)||(10272468-10272535)
chr5 (370-433)||(41277391-41277454)
chr5 (375-432)||(18543238-18543296)
chr5 (358-411)||(583836-583889)
chr5 (443-496)||(13781829-13781882)
chr5 (372-432)||(12975315-12975375)
chr5 (396-432)||(34117578-34117614)
chr5 (370-425)||(9927551-9927605)
chr5 (383-426)||(19138767-19138810)
chr5 (443-490)||(28982073-28982120)
chr5 (370-421)||(32059642-32059693)
chr5 (370-432)||(12425537-12425599)
chr5 (370-427)||(26209460-26209518)
chr5 (370-435)||(40335910-40335975)
chr5 (370-427)||(9202795-9202852)
chr5 (371-424)||(18857450-18857503)
chr5 (370-427)||(32172619-32172676)
chr5 (374-435)||(41016149-41016210)
chr5 (356-429)||(42181137-42181210)
chr5 (386-426)||(6587155-6587195)
chr5 (442-490)||(10907440-10907488)
chr5 (400-456)||(11095489-11095545)
chr5 (300-332)||(14959611-14959643)
chr5 (300-332)||(30845201-30845233)
chr5 (370-422)||(36539712-36539764)
chr5 (356-432)||(37588402-37588478)
[»] chr6 (37 HSPs)
chr6 (300-428)||(4006609-4006738)
chr6 (383-429)||(2727901-2727947)
chr6 (370-432)||(32386605-32386667)
chr6 (370-443)||(281879-281952)
chr6 (370-429)||(14492268-14492327)
chr6 (371-434)||(22742333-22742396)
chr6 (342-432)||(2514640-2514730)
chr6 (370-495)||(4248924-4249049)
chr6 (397-462)||(9041448-9041513)
chr6 (372-433)||(32975946-32976007)
chr6 (439-496)||(32976037-32976094)
chr6 (414-490)||(27857392-27857468)
chr6 (370-422)||(29274281-29274333)
chr6 (441-496)||(5731630-5731685)
chr6 (451-494)||(20351219-20351262)
chr6 (369-432)||(25426135-25426198)
chr6 (441-496)||(31461733-31461788)
chr6 (375-434)||(33828617-33828676)
chr6 (370-432)||(1402962-1403024)
chr6 (370-420)||(5550098-5550148)
chr6 (373-427)||(5623125-5623179)
chr6 (370-424)||(9093606-9093660)
chr6 (358-431)||(10400222-10400296)
chr6 (361-419)||(27693494-27693552)
chr6 (371-429)||(30523627-30523684)
chr6 (439-496)||(2732201-2732258)
chr6 (399-496)||(3525143-3525240)
chr6 (375-424)||(7485118-7485167)
chr6 (370-427)||(20671912-20671969)
chr6 (382-427)||(25100021-25100066)
chr6 (370-443)||(28088253-28088326)
chr6 (356-429)||(28660805-28660878)
chr6 (370-426)||(415270-415326)
chr6 (342-402)||(3217262-3217322)
chr6 (370-426)||(11340673-11340729)
chr6 (361-409)||(27615338-27615386)
chr6 (440-496)||(32386517-32386573)
[»] chr2 (53 HSPs)
chr2 (370-432)||(11513864-11513926)
chr2 (370-453)||(10143138-10143221)
chr2 (370-454)||(28803526-28803610)
chr2 (370-432)||(5043602-5043664)
chr2 (369-426)||(33931618-33931675)
chr2 (370-443)||(43141837-43141910)
chr2 (370-426)||(6993772-6993828)
chr2 (373-496)||(1318229-1318352)
chr2 (349-432)||(17952743-17952826)
chr2 (370-428)||(4090315-4090373)
chr2 (418-496)||(32837361-32837439)
chr2 (301-421)||(10150651-10150772)
chr2 (375-432)||(18066099-18066156)
chr2 (391-432)||(18179282-18179323)
chr2 (372-429)||(29935971-29936028)
chr2 (370-423)||(33942116-33942169)
chr2 (391-432)||(39983329-39983370)
chr2 (434-490)||(5902509-5902565)
chr2 (343-443)||(9478238-9478338)
chr2 (358-426)||(20059096-20059164)
chr2 (374-422)||(35755554-35755602)
chr2 (444-496)||(40943977-40944029)
chr2 (373-432)||(15866710-15866769)
chr2 (370-429)||(22681230-22681289)
chr2 (439-490)||(29430817-29430868)
chr2 (372-419)||(33944573-33944620)
chr2 (370-437)||(37292384-37292451)
chr2 (349-427)||(656824-656902)
chr2 (294-332)||(6772695-6772733)
chr2 (370-427)||(7103529-7103587)
chr2 (342-432)||(18962080-18962170)
chr2 (385-427)||(25800810-25800852)
chr2 (370-432)||(29316817-29316879)
chr2 (370-424)||(40145428-40145482)
chr2 (300-404)||(40722547-40722650)
chr2 (370-432)||(43199380-43199442)
chr2 (375-432)||(1625871-1625928)
chr2 (370-415)||(3423827-3423872)
chr2 (439-496)||(5759529-5759585)
chr2 (396-433)||(9886304-9886341)
chr2 (370-427)||(14666514-14666571)
chr2 (291-332)||(33197397-33197438)
chr2 (369-430)||(33256705-33256766)
chr2 (385-426)||(40279178-40279219)
chr2 (341-425)||(43299451-43299536)
chr2 (439-496)||(44606064-44606121)
chr2 (370-422)||(2416279-2416331)
chr2 (391-427)||(7862740-7862776)
chr2 (371-435)||(9556206-9556270)
chr2 (342-418)||(11344340-11344416)
chr2 (387-443)||(29628774-29628830)
chr2 (396-428)||(34926956-34926988)
chr2 (370-430)||(35485883-35485943)
[»] chr7 (38 HSPs)
chr7 (372-489)||(28340382-28340498)
chr7 (370-443)||(5006540-5006613)
chr7 (370-427)||(12110326-12110383)
chr7 (370-425)||(1417230-1417285)
chr7 (370-488)||(946718-946836)
chr7 (356-429)||(28340889-28340962)
chr7 (411-490)||(17759557-17759636)
chr7 (370-432)||(27548229-27548291)
chr7 (370-432)||(30456492-30456554)
chr7 (370-432)||(40689028-40689090)
chr7 (371-429)||(47046153-47046211)
chr7 (356-426)||(48157168-48157238)
chr7 (439-495)||(22388447-22388503)
chr7 (407-490)||(29574585-29574668)
chr7 (370-429)||(31338474-31338533)
chr7 (440-491)||(33933852-33933903)
chr7 (342-409)||(35536045-35536112)
chr7 (370-429)||(38010680-38010739)
chr7 (302-332)||(2221847-2221877)
chr7 (370-424)||(9527140-9527194)
chr7 (372-430)||(17989067-17989125)
chr7 (385-463)||(18350718-18350796)
chr7 (370-428)||(22759152-22759210)
chr7 (370-408)||(23918923-23918961)
chr7 (370-432)||(46825064-46825126)
chr7 (374-427)||(18516296-18516349)
chr7 (372-485)||(25422318-25422431)
chr7 (439-496)||(33894686-33894743)
chr7 (381-426)||(39518806-39518851)
chr7 (375-432)||(44821930-44821987)
chr7 (300-329)||(47046273-47046302)
chr7 (343-420)||(49060479-49060556)
chr7 (376-428)||(5369737-5369789)
chr7 (300-332)||(22759064-22759096)
chr7 (382-422)||(24909642-24909682)
chr7 (300-332)||(27708934-27708966)
chr7 (300-332)||(31691270-31691302)
chr7 (370-418)||(45813236-45813284)
[»] chr1 (52 HSPs)
chr1 (373-432)||(7218116-7218175)
chr1 (373-432)||(25006076-25006135)
chr1 (374-432)||(17269220-17269278)
chr1 (370-426)||(27738228-27738284)
chr1 (370-429)||(25479547-25479606)
chr1 (382-432)||(25005839-25005889)
chr1 (370-488)||(47002861-47002978)
chr1 (370-443)||(34179903-34179976)
chr1 (349-458)||(40304071-40304179)
chr1 (370-422)||(30371114-30371166)
chr1 (349-429)||(33186002-33186082)
chr1 (370-425)||(5592734-5592789)
chr1 (370-425)||(28467356-28467411)
chr1 (370-425)||(49517036-49517091)
chr1 (439-497)||(14737679-14737737)
chr1 (398-496)||(16980821-16980919)
chr1 (414-456)||(26293146-26293188)
chr1 (370-432)||(30257649-30257711)
chr1 (339-404)||(2773674-2773739)
chr1 (370-427)||(5421967-5422024)
chr1 (377-434)||(8130409-8130466)
chr1 (342-407)||(34619445-34619510)
chr1 (370-443)||(45205034-45205107)
chr1 (439-496)||(49692006-49692063)
chr1 (356-432)||(4200181-4200257)
chr1 (372-432)||(9656618-9656678)
chr1 (379-427)||(12564921-12564969)
chr1 (384-432)||(29045954-29046002)
chr1 (371-463)||(37841965-37842057)
chr1 (373-428)||(4034061-4034116)
chr1 (371-426)||(10581125-10581180)
chr1 (445-488)||(27976670-27976712)
chr1 (371-426)||(31623990-31624045)
chr1 (301-332)||(35666982-35667013)
chr1 (439-490)||(44422758-44422809)
chr1 (372-430)||(2487841-2487899)
chr1 (370-412)||(15360860-15360902)
chr1 (298-332)||(32555701-32555735)
chr1 (341-432)||(35017511-35017604)
chr1 (349-422)||(6933013-6933086)
chr1 (370-443)||(15361679-15361752)
chr1 (371-432)||(17422980-17423041)
chr1 (396-437)||(42556668-42556709)
chr1 (343-408)||(44032065-44032130)
chr1 (371-432)||(44422666-44422727)
chr1 (370-427)||(49888733-49888790)
chr1 (370-430)||(4363676-4363736)
chr1 (300-332)||(6933117-6933149)
chr1 (300-332)||(21516253-21516285)
chr1 (370-430)||(29723455-29723515)
chr1 (370-410)||(45990122-45990162)
chr1 (370-426)||(48830124-48830180)
[»] scaffold0024 (3 HSPs)
scaffold0024 (342-427)||(27514-27599)
scaffold0024 (300-332)||(23806-23838)
scaffold0024 (444-492)||(27640-27688)
[»] scaffold0110 (1 HSPs)
scaffold0110 (383-456)||(35813-35885)
[»] scaffold0311 (1 HSPs)
scaffold0311 (439-496)||(10571-10628)
[»] scaffold0549 (2 HSPs)
scaffold0549 (370-426)||(1772-1828)
scaffold0549 (370-426)||(3862-3918)


Alignment Details
Target: chr3 (Bit Score: 435; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 14 - 496
Target Start/End: Complemental strand, 21872731 - 21872249
Alignment:
Q  14 attattctctagaagttctccaaaatggtatttccataatgatgtaaaatgggaacatcacagttcaacaattgcatttcacattcttgagttaaggcag 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  21872731 attattctctagaagttctccaaaatggtatttccagaatgatgtgaaatgggaacatcacagttcaacaattgcttttcacattcttgagttaaggcaa 21872632  T
Q  114 agtgaaaatttaaggaaaaattaacgaattccccttgcatatgcctgcagacattcaagtgtacgcgaaatttcattgatgatgctaatggcatacctat 213  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21872631 agtgaaaatttaaggacaaattaacaaattccccttgcatatgcctgcagacattcaagtgtacgcgaaatttcattgatgatgctaatggcatacctat 21872532  T
Q  214 cctacatgttggcagaggtatttgatgctcatttaatctgtctttcaatgattttccatcggttaaaatcccaaagaactaagacgctgtttggataaac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21872531 cctacatgttggcagaggtatttgatgctcatttaatctgtctttcaatgattttccatcggttaaaatcccaaagaactaagacgctgtttggataaac 21872432  T
Q  314 aacttaattaaacacttattatattgtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgc 413  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||     
T  21872431 aacttaattaaacacttactatattgtacttatgcataagccatttttataataggagataaaataaggtcaaatttttttgatataagctataagttgt 21872332  T
Q  414 tttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21872331 tttcataagctatcctggaaagtttatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtgcttat 21872249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 48397598 - 48397666
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    ||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||| |||||| ||||    
T  48397598 atttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcattagct 48397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 1816536 - 1816611
Alignment:
Q  357 tttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||||  ||||||||||| |||||| ||||||  |||||| ||||||||| ||||||||||||| |||||    
T  1816536 tttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactgga 1816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 24887408 - 24887325
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||| ||||| | |||||||||||| |||||| ||| || |||||||||| ||| || |||||||||||||||||||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctgga 24887325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 42084354 - 42084301
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    |||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||    
T  42084354 gataaaataatgtcaacttgttttgatataagctattagttgttttcataagct 42084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 490
Target Start/End: Original strand, 24624264 - 24624320
Alignment:
Q  434 agttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||||| ||||||    
T  24624264 agtttatggacatgtcataagctgttttcataagctcttccaaacagtcttacaagt 24624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 443
Target Start/End: Complemental strand, 40122887 - 40122784
Alignment:
Q  339 gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttc 438  Q
    ||||||||| |||||| ||||  |||| |  ||||||||||| |||||| |||||| ||| ||||||||||||| ||| ||||||||||||  ||||||     
T  40122887 gtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcctaaaaagtta 40122789  T
Q  439 atgga 443  Q
    |||||    
T  40122788 atgga 40122784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 48364983 - 48364899
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataag 454  Q
    ||||||||||| ||||||||||||| || || || |||||||| |||||| ||||| | ||||||| | |||||||||| |||||    
T  48364983 agataaaataaagtcaaattgttttcatttacgccataagttgttttcattagctaccttggaaagcttatggacatgttataag 48364899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 14145857 - 14145940
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| | |||||||| || ||||||||||| || ||||||||||  |||| ||||||||||  |||||||||||||| ||||    
T  14145857 ataagcaagttttataacagaagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttgga 14145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 32555085 - 32555022
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaa 433  Q
    ||||||||||| |||||||| ||||  |||||||||||||||| |||||| || ||||||||||    
T  32555085 agataaaataaagtcaaattattttcctataagctataagttgttttcatgagttatcctggaa 32555022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 44061127 - 44061077
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcata 420  Q
    |||||||||||||| ||||||||||  |||||||||||||||| |||||||    
T  44061127 agataaaataaggttaaattgtttttctataagctataagttgttttcata 44061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 490
Target Start/End: Complemental strand, 2100232 - 2100139
Alignment:
Q  397 tataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||||||||||||||| ||||||||| |||| |||| || | | | |||||||||||||| | | || ||||| |  |||||||||||||||||    
T  2100232 tataagctataagttgttttcataagttatcttggagagcttaggaacatgtcataagctgtctccataagctctcacaaacagtctcacaagt 2100139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 23315592 - 23315648
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| ||||||||||||| ||||| |||||||| || || ||||||||||    
T  23315592 agataaaataaagtcaaattgttttcatataggctataagatgtttccataagctat 23315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 2201094 - 2201161
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    |||||||| || |||||| |||||| |||||||||||||| || |||||| ||||||| |||| ||||    
T  2201094 agataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtt 2201161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 31337505 - 31337450
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| |||||| |||||| ||||||| |||||||||  |||||||||||    
T  31337505 agataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 36646486 - 36646427
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||||| ||  ||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  36646486 agataaaataaagtataattgttttcatataagttataacttgttttcataagctatcct 36646427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 30956730 - 30956668
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||||||||||  |||| ||||||||||| ||||| |||||||| ||||    
T  30956730 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttgga 30956668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 30972542 - 30972480
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||||||||||  |||| ||||||||||| ||||| |||||||| ||||    
T  30972542 agataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttgga 30972480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 33405268 - 33405214
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||| || || ||||||| |||||||||||||| || ||||||||||||||    
T  33405268 taaaataaagttaatttgttttcatataagctataagctgttttcataagctatc 33405214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 38462247 - 38462305
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    ||||||||||| |||||| |||||| ||||| |||||||  || |||||||||||||||    
T  38462247 agataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 426
Target Start/End: Original strand, 41057022 - 41057060
Alignment:
Q  388 ttgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  41057022 ttgttttcatataagctataagttgttttcataagctat 41057060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 43875626 - 43875676
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||| | ||||||||||||||||| |||||||||||||| ||||    
T  43875626 gtcaaactgttctcatataagctataagttgttttcataagctatcatgga 43875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 3467491 - 3467438
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    |||||||||| ||||||||||||| |||||  |||||||||| |||| ||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttgttttcgtaagct 3467438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 10101580 - 10101527
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagc 423  Q
    ||||||||||| || |||||||||| ||||||| || |||||| ||||||||||    
T  10101580 agataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 10212505 - 10212452
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagc 423  Q
    ||||||||||| || |||||||||| ||||||| || |||||| ||||||||||    
T  10212505 agataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 19679430 - 19679365
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||||||| |||||| ||||||  |||||||||||||||| ||| |||| ||||| |||| ||||    
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttttataaactatcttggagagtt 19679365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 21865544 - 21865598
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||| ||||||||  |||||| ||||||||||||||||| ||| |||||||||    
T  21865544 agataaaacaaggtcaa--tgttttcatataagctataagttgttttgataagctat 21865598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Complemental strand, 22214745 - 22214704
Alignment:
Q  388 ttgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||| |||||| |||||||||| ||||||||||||||||    
T  22214745 ttgttttcatataacctataagttgttttcataagctatcct 22214704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 23249536 - 23249581
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||| |||||| ||||||| ||||||||| ||||||||||||||    
T  23249536 gtcaaactgtttttatataagatataagttgttttcataagctatc 23249581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 27792838 - 27792895
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||||||||||||| | |||| |||||||||  |||||| |||||||| |||||    
T  27792838 agataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatc 27792895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 28306127 - 28306180
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||| |||||| |||||| ||||||| || |||||| |||||||||||||    
T  28306127 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 28306180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 32703077 - 32703142
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataa 408  Q
    ||||| |||||| |||| ||| |||  |||||||||||  |||||||||||| |||||||||||||    
T  32703077 ttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 4534531 - 4534499
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  4534531 ctgtttggataaacaacttaattaagcacttat 4534499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 10540592 - 10540540
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||| ||||||||  ||| |||||| |||||||||| |||||||||||||    
T  10540592 aaaataaagtcaaattaattttatataaactataagttgttttcataagctat 10540540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 24235787 - 24235731
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||| |||| |||||| | |||  ||||||||||||||||| |||||||||||||    
T  24235787 agataatataaagtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 28801137 - 28801169
Alignment:
Q  292 ctaagacgctgtttggataaacaacttaattaa 324  Q
    ||||||| |||||||||||||||||||||||||    
T  28801137 ctaagacactgtttggataaacaacttaattaa 28801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 36783438 - 36783382
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || |||||||||| |||||| |||| || || |||||||||||||    
T  36783438 agataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 37788826 - 37788882
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| ||| |||| ||||  ||||| |||||||||| |||||||||||||    
T  37788826 agataaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 398
Target Start/End: Complemental strand, 52323978 - 52323950
Alignment:
Q  370 agataaaataaggtcaaattgttttgata 398  Q
    |||||||||||||||||||||||||||||    
T  52323978 agataaaataaggtcaaattgttttgata 52323950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 370 - 496
Target Start/End: Original strand, 34770858 - 34770984
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| |||||| | | |    
T  34770858 agataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagagttcatggacatgtcataagctgttttcataggat 34770957  T
Q  470 tttccaaacagtctcacaagtacttat 496  Q
     |  |||||||| |||||||| |||||    
T  34770958 ctctcaaacagtttcacaagtgcttat 34770984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 6509407 - 6509345
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| |||||||||| || |||||||||||||| || |||||||||||||||||||    
T  6509407 agataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctgga 6509345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 496
Target Start/End: Complemental strand, 31915373 - 31915247
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||| ||||| ||||||||||||| ||| ||| |||||| ||  ||  |||||||||||||| || | |||||| ||||||||| | |||  | |||||    
T  31915373 agatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagcttatggacttgtcataagttgtttgtataagct 31915274  T
Q  470 tttccaaacagtctcacaagtacttat 496  Q
    ||  |||||||||||||||||| ||||    
T  31915273 ttctcaaacagtctcacaagtatttat 31915247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 1470981 - 1470893
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    |||||| |||| |||||||  ||||||||||| ||||||||  ||| |||||||||||||| || |||||||| ||||| || ||||||    
T  1470981 ataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtt 1470893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 423
Target Start/End: Original strand, 42597336 - 42597420
Alignment:
Q  339 gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagc 423  Q
    ||||||||| |||||| |||| ||||| |  ||||||||||| || |||||||||| ||  ||||||||||||| ||||||||||    
T  42597336 gtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 1561253 - 1561300
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||    
T  1561253 tcaaattgttttaatataagctacaagttgttttcataagctatcctg 1561300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 2091740 - 2091787
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||    
T  2091740 tcaaattgttttaatataagctacaagttgttttcataagctatcctg 2091787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 9834879 - 9834836
Alignment:
Q  384 caaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||    
T  9834879 caaattgttttcatataagctataagttgttttcataagctatc 9834836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 11376670 - 11376725
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||| ||| |||| ||||||||||||||||||| ||||||| ||||||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctttcttaagctat 11376725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 39881728 - 39881681
Alignment:
Q  443 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  39881728 acatgtcataagctattttcacaagctcttccaaacaatctcacaagt 39881681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 4558737 - 4558823
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||| |||||| |||| |||||||  ||||||||||| || ||||| |||| ||||| |||||||| || || |||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcct 4558823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 443
Target Start/End: Original strand, 29973050 - 29973120
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    |||||||| |||||| | |||| | ||||||||||||||| |||||||||||||||| || |||| |||||    
T  29973050 taaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatgga 29973120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 7645956 - 7646009
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatcctggaaag 435  Q
    ||||||||||||| || |||||||||||||| |||||||||||| |||| ||||    
T  7645956 gtcaaattgttttcatgtaagctataagttgttttcataagctaacctgtaaag 7646009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 2093245 - 2093305
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    ||||||||||| ||||||| |||||  | |||||||||||||| |||||| ||||||||||    
T  2093245 agataaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctg 2093305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 12361158 - 12361210
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||| | ||||||||||||| |||||||||||||| || |||||||||    
T  12361158 agataaaatgaagtcaaattgttttcatataagctataagctgttttcataag 12361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 31167859 - 31167903
Alignment:
Q  294 aagacgctgtttggataaacaacttaattaaacacttattatatt 338  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||    
T  31167859 aagactctgtttggataaacaacttaattaagcacttatcatatt 31167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 469
Target Start/End: Original strand, 4763884 - 4763983
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    |||||||||||  |||||  ||||| | |||||||||||| || |||  |||||||||||| | || | ||||||||||||| || | ||||||||||||    
T  4763884 agataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagagcttatggacatgtcattagatgttttcaaaagct 4763983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 458
Target Start/End: Complemental strand, 9912860 - 9912805
Alignment:
Q  403 ctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctat 458  Q
    ||||||| || |||| |||||||||||||| || | ||||||||||||||||||||    
T  9912860 ctataagctgttttcctaagctatcctggagagcttatggacatgtcataagctat 9912805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 31884576 - 31884627
Alignment:
Q  386 aattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||||||| ||||||||||||| ||| |||||||||||||| |||| ||||    
T  31884576 aattgttttcatataagctataaattgttttcataagctatcatggagagtt 31884627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 387
Target Start/End: Original strand, 40356767 - 40356854
Alignment:
Q  301 tgtttggataaacaacttaattaaacacttattatat-tgtacttatgcataagccatttttataatagtagataaaataaggtcaaa 387  Q
    |||||| ||||||||||||||||||||||| | ||||  || |||||  |||||| |||| |||||||  ||||||||||| ||||||    
T  40356767 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 40356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 10474210 - 10474267
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||| |||||||||||||||| ||| |||| | || |||||||||||||||||    
T  10474210 ataaaataag-tcaaattgttttgatacaagttatatgatgttttcataagctatcctg 10474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 424
Target Start/End: Complemental strand, 11059794 - 11059745
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    ||||||||||||||||||||  |||||||||||| |||| |||||||||||    
T  11059794 aaaataaggtcaaattgtttc-atataagctataggttgttttcataagct 11059745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 496
Target Start/End: Original strand, 21130670 - 21130728
Alignment:
Q  438 catggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||| ||||||||| || ||||| |  |||||||||||||||||| ||||    
T  21130670 catggacatgtcaaaagctatttccataagctctctcaaacagtctcacaagtatttat 21130728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 29262987 - 29262929
Alignment:
Q  361 tataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcat 419  Q
    |||||||| ||||||||||| |||||||| |||| ||||||||| |||| || ||||||    
T  29262987 tataatagaagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 29262929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 29592636 - 29592574
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || |||||||||   ||||||||||||| || |||| ||||||||||||||    
T  29592636 agataaaataaagtaaaattgtttccttataagctataagctgttttcgtaagctatcctgga 29592574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 787210 - 787153
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| ||||||||||| | |||||||||||||  || ||||||||| ||||    
T  787210 agataaaataaagtcaaattgttatcatataagctataaactgttttcataagttatc 787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 7714299 - 7714352
Alignment:
Q  437 tcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||| ||||| ||||||| | ||| || ||||||||||||||||||||||||||    
T  7714299 tcatcgacatttcataagttgtttccacaagcttttccaaacagtctcacaagt 7714352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 8062502 - 8062547
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||||| |||||||||||||| || | ||||||||||||    
T  8062502 gtcaaattgttttcatataagctataagatgttctcataagctatc 8062547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 10437851 - 10437907
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| |||||| |||||| ||||||||| ||||| | ||||||||||||||    
T  10437851 agataaaataaagtcaaactgtttt-atataagctttaagtaggtttcataagctatc 10437907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 488
Target Start/End: Original strand, 14949925 - 14949974
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaa 488  Q
    |||||||||||||||| |||||||| ||||| | | ||||||||||||||    
T  14949925 atggacatgtcataagttattttcataagctctcctaaacagtctcacaa 14949974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 28784899 - 28784842
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| |||||||||||||||||| || | |||| |  ||||||||||||||    
T  28784899 agataaaataaagtcaaattgttttgatatcagttgtaagctattttcataagctatc 28784842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 38537557 - 38537630
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||| | ||||| |||||||  ||||| ||||||| ||||||||||| |||||||| |||  |||||||    
T  38537557 agataaaatgaagtcaatttgtttttgtataatctataagctgctttcataaactatcctgaaaaactcatgga 38537630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 41336749 - 41336692
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||  ||||||||||||| |||||| ||| || ||| ||||||||||||||    
T  41336749 agataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatc 41336692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 392
Target Start/End: Original strand, 42568711 - 42568801
Alignment:
Q  301 tgtttggataaacaacttaattaaacacttattatat-tgtacttatgcataagccatttttataatagtagataaaataaggtcaaattgtt 392  Q
    ||||||||||||||||||||| |||||||||| ||||  | ||||||  |||||| |||| || || || ||||||||||| || ||||||||    
T  42568711 tgtttggataaacaacttaatcaaacacttatcatataagcacttat--ataagctatttctaaaacagaagataaaataaagtgaaattgtt 42568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataag 409  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 427
Target Start/End: Complemental strand, 13561447 - 13561359
Alignment:
Q  339 gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||| |||| |||||| |||| ||||| || | || |||||| ||||||||||||| ||||||  ||||| ||| ||||| ||||||||    
T  13561447 gtacatatgaataagctatttctataacagaaaattaaataaagtcaaattgttttcatataaattataacttgttttcacaagctatc 13561359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 16210989 - 16210933
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||||| || | |||||||| ||||||||||||||||| ||||| || |||||    
T  16210989 gataaaataaagttacattgttttcatataagctataagttgttttcaaaacctatc 16210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 30013196 - 30013244
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||| |||||  |||||||||||||| || |||||||||||||||||    
T  30013196 gtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 35374477 - 35374425
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||||| || |||||||||| |||||||||||||  || |||||||||    
T  35374477 agataaaataaagttaaattgttttcatataagctataatctgatttcataag 35374425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 37461113 - 37461165
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||| |||||| |||| | |||||||||||| |||| ||||||||||||||    
T  37461113 aaataacgtcaaactgttattatataagctatatgttgttttcataagctatc 37461165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 343 - 496
Target Start/End: Complemental strand, 32920529 - 32920377
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgg 442  Q
    ||||| |||||| |||||||||| |  ||||||||||| ||||||| ||||| ||| ||||||||||||| ||||||||| ||||||| |||||| ||||    
T  32920529 ttatggataagctatttttataaca--agataaaataaagtcaaatcgttttaatagaagctataagttgttttcataagttatcctgaaaagtttatgg 32920432  T
Q  443 acatgt-cataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||| ||||||||| || |  | ||| |  ||||||||||||||||| |||||    
T  32920431 acatgtacataagctacttccgtatgctctcgcaaacagtctcacaagtgcttat 32920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 432
Target Start/End: Original strand, 10192227 - 10192312
Alignment:
Q  347 gcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| | |||||||||| |  ||||| ||||| ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||    
T  10192227 gcataaactatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctgga 10192312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 463
Target Start/End: Complemental strand, 1408401 - 1408307
Alignment:
Q  369 tagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttca 463  Q
    ||||||| |||| || | ||||||||  ||||| ||||||||||||||||||||||| | | || |||| |||||||||| ||||||| ||||||    
T  1408401 tagataatataacgttatattgttttcgtataatctataagttgctttcataagctaacttcgagagtttatggacatgtaataagctgttttca 1408307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 2996539 - 2996601
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||  ||||||||||||| ||||||| ||||||||| |||||||||||||| ||||    
T  2996539 agataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttgga 2996601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 496
Target Start/End: Complemental strand, 3549635 - 3549509
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||| |  ||||||  |||| |||||| |||| |||||||||||| ||||||||| || ||||  |||||||||||||  ||||||||| ||| |    
T  3549635 agataaaatcaaatcaaatgattttcatataacctatgagttgctttcatgagctatcctagatagtttgtggacatgtcatacactattttcataagtt 3549536  T
Q  470 tttccaaacagtctcacaagtacttat 496  Q
     |  |||||||||||| |||| |||||    
T  3549535 ctctcaaacagtctcataagtgcttat 3549509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 51630077 - 51630134
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| || ||||||||||||||||||||||||| |  ||||||||||||||    
T  51630077 agataaaataaagttaaattgttttgatataagctataagctattttcataagctatc 51630134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 425
Target Start/End: Complemental strand, 55870471 - 55870390
Alignment:
Q  344 tatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    |||| |||| |||||||||||| |  |||| |||||| |||||| |||||| | ||||||||||||||| ||||||||||||    
T  55870471 tatgtataatccatttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 437
Target Start/End: Complemental strand, 8422969 - 8422876
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    |||||| |||||| |||||||||| |  ||||||||||| ||||  ||||||| ||||||||||||||||| ||||| || ||||| |||| ||||    
T  8422969 cttatgtataagctatttttataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttcacaatctatcttggagagtt 8422876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 13949948 - 13949893
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||  ||||||||    
T  13949948 agataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 49219107 - 49219162
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||| |||||||| |||| ||||||||||||||||| |||||||| |||||    
T  49219107 ataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 18630618 - 18630704
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    ||||||||||| | ||||  |||| |  ||||||||||| ||||| | ||||| ||||||||||||||||| ||||| |||||||||    
T  18630618 cttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatcc 18630704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 456
Target Start/End: Complemental strand, 29374012 - 29373903
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcat--ggacat 446  Q
    |||||| |||| ||||| || ||||||||||| |||||| ||| || ||||||||||||| ||| ||||||||| |||  || |||||| ||  |||||     
T  29374012 ataagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctataatttgttttcataagttattttgaaaagtttatacggacac 29373913  T
Q  447 gtcataagct 456  Q
    ||||||||||    
T  29373912 gtcataagct 29373903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 35958594 - 35958688
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||| |||||| |||| ||||| |  || |||||||| ||||||||  ||| |||||||||| ||| || ||||||||||||||||||| ||||    
T  35958594 ttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagtt 35958688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 429
Target Start/End: Original strand, 42866047 - 42866093
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatcct 42866093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 435
Target Start/End: Original strand, 927442 - 927507
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaag 435  Q
    |||| |||||| |||||| |||||| ||||||||||||| ||| || ||||||||||| |||||||    
T  927442 agatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatcatggaaag 927507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 29778763 - 29778816
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||| |||||| |||||||||| ||||||||| ||||||| ||||||||||||    
T  29778763 ataaattaaggtgaaattgttttcatataagctgtaagttgttttcataagcta 29778816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 30024635 - 30024704
Alignment:
Q  339 gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataa 408  Q
    |||||||||||||||  |||| ||||| |  ||||||||||| || |||||||||| |||||||||||||    
T  30024635 gtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 35517224 - 35517175
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||||| |||||||||| ||| || |||||||||||||||||||    
T  35517224 tcaaattgtttttatataagctagaagatgttttcataagctatcctgga 35517175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 50298579 - 50298631
Alignment:
Q  443 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||    
T  50298579 acatgtcataagctatttt-ataagtttttccaaacagtctcacaagtgcttat 50298631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 54325141 - 54325068
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||||| |||||| |||||| |||||||||||||| |  ||||| |||||||| |||| |||| |||||    
T  54325141 agataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatgga 54325068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 3175917 - 3175977
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    ||||||||||| ||||||||||||| |  |||| |||||| || |||||||||||||||||    
T  3175917 agataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctg 3175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 4071848 - 4071904
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| |||||||| |||| ||||||||||||||||| | | |||||||||    
T  4071848 agataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 7730590 - 7730674
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataag 454  Q
    ||||||||||| |  ||| |||||| |||| | ||| || ||| ||||||||||||||||||| || | ||||||||||||||||    
T  7730590 agataaaataaagcaaaagtgtttttatattaactagaaattgttttcataagctatcctggagagcttatggacatgtcataag 7730674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 486
Target Start/End: Complemental strand, 19429592 - 19429476
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| |||||| |||||| |||||||   |||| |  ||||||||||||||||   ||| | |||||||||||||||| | | | || |||||    
T  19429592 agataaaataaagtcaaactgtttttatataagtcgtaagctcttttcataagctatccttataagcttatggacatgtcataagttttctccataagct 19429493  T
Q  470 tttccaaacagtctcac 486  Q
     | ||||||||||||||    
T  19429492 ctcccaaacagtctcac 19429476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 443
Target Start/End: Original strand, 24091434 - 24091502
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    |||||| |||||||| |||| |||||||||||||  || ||||||||| |||||||||| ||| |||||    
T  24091434 aaataaagtcaaattattttcatataagctataaactgttttcataagttatcctggaaggtttatgga 24091502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 25497624 - 25497672
Alignment:
Q  448 tcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||| |||||||| ||||||| |||||| |||||||||||||||||    
T  25497624 tcataagatattttcataagctttaccaaactgtctcacaagtacttat 25497672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 43372087 - 43372015
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    |||||||||| |  ||||||||||  |||||| |||||| |||||||||||||  || |||||||||||||||    
T  43372087 atttttataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataagctatcc 43372015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 496
Target Start/End: Complemental strand, 8328132 - 8328073
Alignment:
Q  437 tcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||||||||  | |||||| ||||| ||||||||||||||| |||| |||||    
T  8328132 tcatggacatgtcataaattgttttcataagctattccaaacagtctcataagtgcttat 8328073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 24371057 - 24370998
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||||||  |||||||| ||| | | ||||||||||||| ||||||||||||||||    
T  24371057 agataaaataaattcaaattgcttttacaaaagctataagttgttttcataagctatcct 24370998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Original strand, 29263337 - 29263396
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||| || | |||||||| | |||||| |||||||| |||||||||||||||||    
T  29263337 gataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctg 29263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 7368157 - 7368103
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagc-tataagttgctttcataagctat 426  Q
    |||||||| ||||||||||||| |||||||| ||||||||| || ||||||||||    
T  7368157 taaaataaagtcaaattgttttcatataagcttataagttgtttccataagctat 7368103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 7730513 - 7730547
Alignment:
Q  303 tttggataaacaacttaattaaacacttattatat 337  Q
    |||||||||||||||||||||| ||||||||||||    
T  7730513 tttggataaacaacttaattaagcacttattatat 7730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 9841053 - 9841095
Alignment:
Q  391 ttttgatataagctataagttgctttcataagctatcctggaa 433  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  9841053 ttttcatataagctataagatgttttcataagctatcctggaa 9841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 425
Target Start/End: Complemental strand, 30207662 - 30207620
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||    
T  30207662 tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 417
Target Start/End: Complemental strand, 42322010 - 42321936
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttc 417  Q
    ||||| |||||| |||||||||| |   |||||||||| ||||||||||||| ||||||  ||||||||| ||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 1404367 - 1404412
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgtttt 394  Q
    |||||| |||| |||||||  |||||||||||||||||||||||||    
T  1404367 ataagctatttctataataaaagataaaataaggtcaaattgtttt 1404412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Complemental strand, 7694102 - 7694041
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    |||||| ||||||  ||||||||||||| || ||||||||| ||||||||| |||| |||||    
T  7694102 gtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatgga 7694041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Original strand, 11917525 - 11917570
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctt 415  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||    
T  11917525 agataaaataaagtcaaattattttcatataacctataagttgctt 11917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 19429681 - 19429731
Alignment:
Q  354 ccatttttataatagtagataaaataaggtcaaattgttttgatataagctat 406  Q
    |||||| |||||||  ||||||||||  |||||||||||||||||||||||||    
T  19429681 ccatttctataatataagataaaata--gtcaaattgttttgatataagctat 19429731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 488
Target Start/End: Original strand, 23819148 - 23819197
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaa 488  Q
    |||||||||||||||||| |||||  || || ||||||||||||||||||    
T  23819148 atggacatgtcataagctgttttcttaaactcttccaaacagtctcacaa 23819197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 424
Target Start/End: Complemental strand, 24160662 - 24160545
Alignment:
Q  308 ataaacaacttaattaaacacttattatatt-gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctat 406  Q
    ||||||||||||||||||| ||||| ||||  || |||||  ||||||  ||| ||||| |  |||||| ||||  ||||| | |||| || ||||||||    
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctat 24160563  T
Q  407 aagttgctttcataagct 424  Q
    |||||| |||||||||||    
T  24160562 aagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 25885825 - 25885882
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| || ||||||||||  | |||||||||||||| ||||||||| ||||    
T  25885825 agataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatc 25885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 31038977 - 31038932
Alignment:
Q  364 aatagtagataaaataaggtcaaattgttttgatataagctataag 409  Q
    |||| |||||||||||| ||||||||||||| ||||||| ||||||    
T  31038977 aataatagataaaataaagtcaaattgttttcatataagttataag 31038932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 47119069 - 47119012
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||| || || |||||||||| |||||||||||||||||  |||||| ||||||    
T  47119069 agataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatc 47119012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 52172788 - 52172841
Alignment:
Q  443 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||||| |||||| ||| ||| || ||||||||||||| |||||||    
T  52172788 acatgtcataagctgttttcataagttttccccaacagtctcacaaatacttat 52172841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 53626742 - 53626795
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagc 423  Q
    |||||||||||  ||||| |||||| |||||||||||||| || ||||||||||    
T  53626742 agataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 437536 - 437480
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || ||||||| || ||||||| | ||||||| |||||||||||||    
T  437536 agataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 11802500 - 11802556
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| |||||||| || | | |||||||| |||||| |||||||||||||    
T  11802500 agataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctat 11802556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 17884034 - 17884090
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || ||||||||||  |||||| ||| ||||| |||||||||||||    
T  17884034 agataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctat 17884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataag 409  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 22471268 - 22471348
Alignment:
Q  341 acttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataa 421  Q
    ||||||| ||||||||||| | ||||   ||||||| ||| | |||| |||||| ||||||| ||||||||| ||||||||    
T  22471268 acttatgtataagccatttctttaattaaagataaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 42685390 - 42685446
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||| | || ||||||||||  |||||||| ||||||| |||||||||||||    
T  42685390 agataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctat 42685446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 496
Target Start/End: Complemental strand, 38047959 - 38047833
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| |||||||| |||| |||||  ||||| | || ||||||||||||||||||| || | |||||||||||||||| | ||| || |||||    
T  38047959 agataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatggacatgtcataagttgtttccataagct 38047860  T
Q  470 tttccaaacagtctcacaagtacttat 496  Q
     | |||||||||| |||||||||||||    
T  38047859 ctcccaaacagtcacacaagtacttat 38047833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 35960353 - 35960444
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaag 435  Q
    |||||||||| | |||| |||||||  ||||||||||| |||||| | |||  |||||| |||||||||| ||||||||||||||||||||||    
T  35960353 ttatgcataaactatttctataataaaagataaaataaagtcaaactatttc-atataaactataagttgatttcataagctatcctggaaag 35960444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 14295472 - 14295534
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| |||||| |||||| |||||||||||||| || |||| ||||||||||||||    
T  14295472 agataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctgga 14295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 427
Target Start/End: Original strand, 34205206 - 34205262
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||| ||| |||||||| |||| ||||||||||||||||| ||||||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttgttttcataagctatc 34205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 42646882 - 42646994
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagctt 470  Q
    |||||||| | || ||||||||||  | ||||||||||| || |||||||| | ||| |||| || | ||| ||||||||||||||||||||| ||| |     
T  42646882 gataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaacatgtcataagctattttcataagttc 42646981  T
Q  471 ttccaaacagtct 483  Q
    ||||||| |||||    
T  42646982 ttccaaatagtct 42646994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 10272535 - 10272468
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||||||| | |||||||||||||  |||||||||||||||| |||||||||| ||| |||| ||||    
T  10272535 agataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtt 10272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 41277454 - 41277391
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaa 433  Q
    ||||||||||| |||||| |||||| ||||||| || |||||| |||||||||||||| |||||    
T  41277454 agataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatcttggaa 41277391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 432
Target Start/End: Complemental strand, 18543296 - 18543238
Alignment:
Q  375 aaataaggtcaaa-ttgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||    
T  18543296 aaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctgga 18543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 583889 - 583836
Alignment:
Q  358 ttttataatagtagataaaataaggtcaaattgttttgatataagctataagtt 411  Q
    |||||||| || ||||||||||| |||||| |||||| ||||||||||||||||    
T  583889 ttttataacagaagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 496
Target Start/End: Complemental strand, 13781882 - 13781829
Alignment:
Q  443 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||    
T  13781882 acatgtcataagctatttctacaagctctaccaaacagtctcacaagtacttat 13781829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 12975315 - 12975375
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||  |||||||||||| |||||||||||||| ||  ||||||||||||| ||||    
T  12975315 ataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttgga 12975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 34117614 - 34117578
Alignment:
Q  396 atataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||||||||||||||||||||||||| ||||    
T  34117614 atataagctataagttgctttcataagctatcttgga 34117578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 9927551 - 9927605
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||| | ||||||||||||| |||||||| |||||||| ||||||||||||    
T  9927551 agataaaattacgtcaaattgttttcatataagcgataagttg-tttcataagcta 9927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 426
Target Start/End: Complemental strand, 19138810 - 19138767
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||||| | ||||||||||||||| |||||||||||||    
T  19138810 tcaaattgttttcagataagctataagttgttttcataagctat 19138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 28982073 - 28982120
Alignment:
Q  443 acatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||    
T  28982073 acatgtcataatctctttccataagcttttccaaacagtctcacaagt 28982120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 32059693 - 32059642
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataa 421  Q
    ||||||||||| |||||| |||||| |||||||||||||| || ||||||||    
T  32059693 agataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 12425537 - 12425599
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||||||||||  ||||||||||||| || ||||| |||||||| ||||    
T  12425537 agataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttgga 12425599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 26209518 - 26209460
Alignment:
Q  370 agataaaataaggtcaaattgttttga-tataagctataagttgctttcataagctatc 427  Q
    ||||||||||| ||| ||||||||| | ||||||||||||| || ||||||||||||||    
T  26209518 agataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatc 26209460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 40335975 - 40335910
Alignment:
Q  370 agataaaataaggtcaaattgttttg-atataagctataagttgctttcataagctatcctggaaag 435  Q
    ||||||||||||  |||||||||||  ||||||| |||||| ||||||||||||||||| |||||||    
T  40335975 agataaaataagc-caaattgtttttcatataagttataagctgctttcataagctatcttggaaag 40335910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 9202852 - 9202795
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| || |||||||||| |||||||| ||||| || ||||||||| ||||    
T  9202852 agataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatc 9202795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 18857503 - 18857450
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    |||||||||| |||||||||||||  ||||| ||||||| || |||||||||||    
T  18857503 gataaaataaagtcaaattgtttttctataatctataagctgttttcataagct 18857450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 32172619 - 32172676
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||| | ||||| ||||||  |||||||||||||| || ||||||||||||||    
T  32172619 agataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatc 32172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 41016149 - 41016210
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaag 435  Q
    |||||||  ||||| |||||| ||||||||||||||||| ||||| |||| ||| |||||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaag 41016210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 42181210 - 42181137
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||||| |  |||||||| || ||||||| ||||| ||||||||||||||||| || || ||| ||||||    
T  42181210 atttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagttatcct 42181137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 6587195 - 6587155
Alignment:
Q  386 aattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||  |||||||||||||||| |||||||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctat 6587155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 10907440 - 10907488
Alignment:
Q  442 gacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||||| |||||| | |||||| ||||| ||||||||||||||||||||    
T  10907440 gacatgacataagttgttttcataagctcttccaaacagtctcacaagt 10907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 11095545 - 11095489
Alignment:
Q  400 aagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagct 456  Q
    |||||| |||||| ||||||||||||| ||||| |  | ||||||||||||||||||    
T  11095545 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagct 11095489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 14959611 - 14959643
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||| |||||||||||||||||||||||||||    
T  14959611 ctgttgggataaacaacttaattaaacacttat 14959643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 30845201 - 30845233
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  30845201 ctgtttggataaacaacttaattaagcacttat 30845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 36539712 - 36539764
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||||| |||||  |||||| ||||||||||||||||| ||| |||||    
T  36539712 agataaaataaagtcaacctgttttcatataagctataagttgtttttataag 36539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 37588478 - 37588402
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||| |||||||  ||||||||| |  |||||  ||||| ||||||||||||||||| ||||||||| ||| |||||    
T  37588478 atttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctgga 37588402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 428
Target Start/End: Original strand, 4006609 - 4006738
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttattatatt-gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgata 398  Q
    |||||||||||| |||||||||||| | |||||   ||  || ||||||||||||  |||| ||||| |   |||||||||| ||||||||||||| |||    
T  4006609 ctgtttggataagcaacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttata 4006708  T
Q  399 taagctataagttgctttcataagctatcc 428  Q
    |||||||||||||| |||||||||||||||    
T  4006709 taagctataagttgttttcataagctatcc 4006738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 429
Target Start/End: Complemental strand, 2727947 - 2727901
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  2727947 tcaaattgtattgatataagctataagttgttttcataagctatcct 2727901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 32386667 - 32386605
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||||||||||||||||| ||||||| |||| |||| |||||| || |||||||||    
T  32386667 agataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctgga 32386605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 281952 - 281879
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||||| ||||| ||||||| |||||||||||||| ||  ||||||||||||||| || || |||||||    
T  281952 agataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatgga 281879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 14492268 - 14492327
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||| | ||||||||||||||||| |||||||||| || ||||||||| ||||||    
T  14492268 agataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagttatcct 14492327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 22742333 - 22742396
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaa 434  Q
    |||||||||| ||||||||||||| |||||||||||||| |  ||| ||||| |||||||||||    
T  22742333 gataaaataaagtcaaattgttttcatataagctataagctatttttataagttatcctggaaa 22742396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 432
Target Start/End: Original strand, 2514640 - 2514730
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||||| |||| |||||||  ||||||||||| |||||| |  ||| |||| |||||||||||  ||||||||||| |||||||    
T  2514640 cttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttattttcataagctgtcctgga 2514730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 495
Target Start/End: Original strand, 4248924 - 4249049
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| ||||||||| |||  ||||| | ||||| || |||| |||||||||  ||| || | ||||||||| |||||| | |||||| |||||    
T  4248924 agataaaataaagtcaaattgattttgtataaacaataaggtgttttcctaagctatctcggagagcttatggacatgccataaggtgttttcataagct 4249023  T
Q  470 tttccaaacagtctcacaagtactta 495  Q
     ||| ||||| | |||||||| ||||    
T  4249024 cttcaaaacaatttcacaagtgctta 4249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 9041513 - 9041448
Alignment:
Q  397 tataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttc 462  Q
    ||||||||||||| || ||| || ||||||| |||| || | ||||||||||||||||||||||||    
T  9041513 tataagctataagctgtttttattagctatcgtggagagcttatggacatgtcataagctattttc 9041448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 32975946 - 32976007
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaa 433  Q
    ||||||||| |||||| |||||  ||| |||| |||||||| ||||||||||||||||||||    
T  32975946 ataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatcctggaa 32976007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 439 - 496
Target Start/End: Original strand, 32976037 - 32976094
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||| |||||||||||| |||  | ||||| ||||||||||||||||||||||||||    
T  32976037 atggaaatgtcataagctgtttctataagctcttccaaacagtctcacaagtacttat 32976094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 490
Target Start/End: Original strand, 27857392 - 27857468
Alignment:
Q  414 tttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||||||||||||| |||| || | ||||| |||||||||| | |||||| ||||| | ||||||||| ||||||||    
T  27857392 tttcataagctatcatggagagcttatggagatgtcataagttgttttcataagctctcccaaacagtttcacaagt 27857468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 29274333 - 29274281
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||||| ||||||||||||| |||||||||||||  || |||||||||    
T  29274333 agataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 5731630 - 5731685
Alignment:
Q  441 ggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||| |||||||||||||||| ||||| | ||||||| |||||||||| |||||    
T  5731630 ggacatatcataagctattttcataagctctaccaaacactctcacaagtgcttat 5731685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 494
Target Start/End: Original strand, 20351219 - 20351262
Alignment:
Q  451 taagctattttcaaaagcttttccaaacagtctcacaagtactt 494  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||    
T  20351219 taagctattttcataagctgtcccaaacagtctcacaagtactt 20351262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 25426135 - 25426198
Alignment:
Q  369 tagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||||| ||||||||| ||| || ||||||||||| |  ||| |||||||||||||||    
T  25426135 tagataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctgga 25426198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 496
Target Start/End: Original strand, 31461733 - 31461788
Alignment:
Q  441 ggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||| |||||||||||||||||  ||||| || | |||||||||||||||||||||    
T  31461733 ggacttgtcataagctattttcgtaagctcttgcgaacagtctcacaagtacttat 31461788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 33828617 - 33828676
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaa 434  Q
    |||||| |||||||||||||  |||||| ||||||||| ||| |||||||||| ||||||    
T  33828617 aaataaagtcaaattgttttcgtataagttataagttgttttaataagctatcatggaaa 33828676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 1402962 - 1403024
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||| | |||| ||||||||||||| ||| |||||||||||||| ||||    
T  1402962 agataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatgga 1403024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 5550098 - 5550148
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcata 420  Q
    |||||| |||| ||||||||||||| |||||||||||||| || |||||||    
T  5550098 agataacataaagtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 5623125 - 5623179
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||| | ||||| ||||| |||||| |||||||||| ||||||||||||||    
T  5623125 taaaataaagccaaatagttttcatataaactataagttgttttcataagctatc 5623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 9093660 - 9093606
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    ||||||||||| || ||||||||||  ||||||||||||| || |||||||||||    
T  9093660 agataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 10400222 - 10400296
Alignment:
Q  358 ttttataatagtagataaaa-taaggtcaaattgttttgatataagctataagttgctttcataagctatcctgg 431  Q
    ||||||||||  |||||||| ||| ||||||||||| | |||||||||||||| ||  |||||||| ||||||||    
T  10400222 ttttataataaaagataaaaataaagtcaaattgttatcatataagctataagatgtcttcataagatatcctgg 10400296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 27693552 - 27693494
Alignment:
Q  361 tataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcat 419  Q
    |||||||| ||||||||||| |||||||| |||| ||||||||| |||| || ||||||    
T  27693552 tataatagaagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 27693494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 30523627 - 30523684
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||||| ||||||| || || ||||||||||||||||  ||||||||||||||||    
T  30523627 gataaaataatgtcaaatcgtcttcatataagctataagtt-ttttcataagctatcct 30523684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 496
Target Start/End: Complemental strand, 2732258 - 2732201
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||  |||| |||| ||| || |||||||||||||||||||||||||| |||||    
T  2732258 atggacagatcattagctgtttccataagcttttccaaacagtctcacaagtgcttat 2732201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 3525143 - 3525240
Alignment:
Q  399 taagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||| || ||| ||| |||||||| || || | ||||||||||||||| |||||| || || || |||| ||||||| ||  |||||||||    
T  3525143 taagctataagctgtttttatatgctatcctagagagcttatggacatgtcataaactatttccataaactcttccgaacagtcacaagagtacttat 3525240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 424
Target Start/End: Complemental strand, 7485167 - 7485118
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    |||||| || ||||| |||| ||||||||||||||||| |||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 20671969 - 20671912
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| |||||||||||||  |||||||| ||| ||| |||||||| |||||    
T  20671969 agataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatc 20671912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 25100021 - 25100066
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  25100021 gtcaaattgttttcatagaagttataagttgttttcataagctatc 25100066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 28088326 - 28088253
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    |||||||||||   || |||||||| |||||||||||||  || |||||||||||||| |||| || |||||||    
T  28088326 agataaaataaatgcagattgttttcatataagctataaactgttttcataagctatcatggagagctcatgga 28088253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 28660878 - 28660805
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||||| | |||||||||||| || ||||| |||| ||||||  ||||| ||| |||||||| |||||||    
T  28660878 atttttataacaatagataaaataaagttaaattattttcatataaattataaattgttttcataaactatcct 28660805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 415270 - 415326
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||| || || ||||||||||  |||||||||||||||| ||| |||||||||    
T  415270 agataaaacaaagttaaattgttttcgtataagctataagttgtttttataagctat 415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 3217322 - 3217262
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataag 402  Q
    |||||| |||||| |||||| ||| || ||||||||||| |||||||| |||| |||||||    
T  3217322 cttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 11340729 - 11340673
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || || || |||| ||||| ||||||||||| |||||||||||||    
T  11340729 agataaaataaagttaatttattttcatatacgctataagttggtttcataagctat 11340673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 27615386 - 27615338
Alignment:
Q  361 tataatagtagataaaataaggtcaaattgttttgatataagctataag 409  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||| ||||    
T  27615386 tataataatagataaaataaagtcaaattcttttcatataagctgtaag 27615338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 32386573 - 32386517
Alignment:
Q  440 tggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||    
T  32386573 tggacatgttataagatatttccataagctctttcaaacggtctcacaagtacttat 32386517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 11513864 - 11513926
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  11513864 agataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatgga 11513926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 10143138 - 10143221
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataa 453  Q
    ||||||||| | |||||| |||||| ||||||||||||||||  |||||||||||||| |||| |||| ||||| |||||||||    
T  10143138 agataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatggatatgtcataa 10143221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 28803610 - 28803526
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataag 454  Q
    ||||||||||| |||||| || ||| |||||||||| |||||| |||| ||| |||||||||| || | ||||||||||||||||    
T  28803610 agataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttatggacatgtcataag 28803526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 5043664 - 5043602
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| |||||| |||||| |||||||||| |||||| |||||||||||||| ||||    
T  5043664 agataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatgga 5043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 33931675 - 33931618
Alignment:
Q  369 tagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||||||||| ||||||||  ||||||||||||| || |||||||||||||    
T  33931675 tagataaaataaggtcagattgtttttgtataagctataagctgttttcataagctat 33931618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 43141837 - 43141910
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||| ||| ||||||||||||  |||||||||||||| || ||||||||||||||||| | |||| |||||    
T  43141837 agataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatgga 43141910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 6993828 - 6993772
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||||||||||||| | || |||||||||||| |||| |||||||||||||    
T  6993828 agataaaataaggtcaaattatattcatataagctataggttgttttcataagctat 6993772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 496
Target Start/End: Original strand, 1318229 - 1318352
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagctttt 472  Q
    |||||| | ||||| ||||||| ||| | ||||||||||  ||||| |||| ||||| || || |  ||||||||||||||| | |||||| ||||| |     
T  1318229 taaaatgaagtcaacttgttttcatagatgctataagttattttcacaagccatcctagagagcttctggacatgtcataagatgttttcataagctctc 1318328  T
Q  473 ccaaacagtctcacaagtacttat 496  Q
     ||||||||||||||||| |||||    
T  1318329 acaaacagtctcacaagtgcttat 1318352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 17952826 - 17952743
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||| ||||| |  ||||||||||| |||||| | |||| |||||||||| ||| || |||||||||||||||||||    
T  17952826 ataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctgga 17952743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 4090315 - 4090373
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    ||||||||||| |||||||||||| | ||||| |||||||||| || ||||||||||||    
T  4090315 agataaaataaagtcaaattgtttcggtataatctataagttgtttacataagctatcc 4090373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 496
Target Start/End: Original strand, 32837361 - 32837439
Alignment:
Q  418 ataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||| ||||| | ||||| | |||||||||| ||||||| |||||| ||| | | ||||||||||||||||||||||||    
T  32837361 ataacctatctttgaaagctaatggacatgttataagctgttttcataagttctcccaaacagtctcacaagtacttat 32837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 421
Target Start/End: Original strand, 10150651 - 10150772
Alignment:
Q  301 tgtttggataaacaacttaattaaacacttattatat-tgtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatat 399  Q
    ||||| |||||||||||||||||| ||||||||||||  ||  ||||| |||||  |||| |||||||  ||||||||||| || |||| ||||| |||     
T  10150651 tgtttagataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcatag 10150750  T
Q  400 aagctataagttgctttcataa 421  Q
    ||  || |||||| ||||||||    
T  10150751 aatttacaagttgttttcataa 10150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 18066099 - 18066156
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| || |||||||||| |||||||||||||| || |||||||||||||| ||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttgga 18066156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 18179323 - 18179282
Alignment:
Q  391 ttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctgga 18179282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 29935971 - 29936028
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||| ||||||||||||  || |||||||||||||  ||||||||||||||||    
T  29935971 ataaaataacgtcaaattgtttccatgtaagctataagtttttttcataagctatcct 29936028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 33942116 - 33942169
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagc 423  Q
    ||||||||||| |||||| |||||| || |||||||||||||| ||||||||||    
T  33942116 agataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 39983329 - 39983370
Alignment:
Q  391 ttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctgga 39983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 490
Target Start/End: Complemental strand, 5902565 - 5902509
Alignment:
Q  434 agttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||| ||| |||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  5902565 agtttatgaacatgtcataagctgttttcataagttcttccaaacagtctcacaagt 5902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 443
Target Start/End: Original strand, 9478238 - 9478338
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgg 442  Q
    ||||| |||||| |||| ||||| ||||||||||||||  ||||| | |||| |||||||||||| | ||  ||| ||||||||| |||| |||| ||||    
T  9478238 ttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggagagttgatgg 9478337  T
Q  443 a 443  Q
    |    
T  9478338 a 9478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 426
Target Start/End: Original strand, 20059096 - 20059164
Alignment:
Q  358 ttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||||||||||||||| ||| ||||  ||| |||||||||||||  || |||||||| ||||    
T  20059096 ttttataatagtagataaaataaagtctaattactttcatataagctataaagtgttttcataaactat 20059164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 35755602 - 35755554
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||||||    
T  35755602 aaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 40943977 - 40944029
Alignment:
Q  444 catgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||| |||||| || |||||||||||||| |||||||| |||||    
T  40943977 catgtcataagctgttttcataaacttttccaaacagtttcacaagtgcttat 40944029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 15866769 - 15866710
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||| ||| | ||||||| ||||||||||||||   ||||||||||||||||||||    
T  15866769 taaaataaagtcgacttgttttcatataagctataagccactttcataagctatcctgga 15866710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 22681289 - 22681230
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||| || | ||||||||||| |||||||||||||| || |||||||| |||||||    
T  22681289 agataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 22681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 490
Target Start/End: Original strand, 29430817 - 29430868
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    ||||||||||||||||||||||||| ||| | ||||||| |||| |||||||    
T  29430817 atggacatgtcataagctattttcataagttcttccaaatagtcccacaagt 29430868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 33944573 - 33944620
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcat 419  Q
    ||||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  33944573 ataaaataaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 37292451 - 37292384
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||||||||| || ||| | |||| ||||||||||| ||||| |||| |||||||||||||| ||||    
T  37292451 agataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtt 37292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 656902 - 656824
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||| |||| ||||| |  ||||||||||   ||||||||||||  |||||||| ||||||| ||||||||||||||    
T  656902 ataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatc 656824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 6772733 - 6772695
Alignment:
Q  294 aagacgctgtttggataaacaacttaattaaacacttat 332  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  6772733 aagactctgtttggataaacaacttaattaagcacttat 6772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 7103587 - 7103529
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttg-ctttcataagctatc 427  Q
    ||||||||||| |||||| |||||| |||||||||||||| ||  ||||||||||||||    
T  7103587 agataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatc 7103529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 432
Target Start/End: Complemental strand, 18962170 - 18962080
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| || ||| |||||||||| |  ||||||||||| || ||| |||||| |||||||||||||  |  |||||||||||||| ||||    
T  18962170 cttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatgga 18962080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 427
Target Start/End: Original strand, 25800810 - 25800852
Alignment:
Q  385 aaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||||||| |||||||||||||| || ||||||||||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctatc 25800852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 29316879 - 29316817
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||||||| |||||||||| | |||| ||||||| || |||||| ||||||| ||||    
T  29316879 agataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttgga 29316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 40145428 - 40145482
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    ||||||||||| ||||| ||||||| || |||| ||||||||| |||||||||||    
T  40145428 agataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct 40145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 40722650 - 40722547
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttattatat-tgtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgata 398  Q
    |||||||||||||||||||||| ||   |||||| ||| ||| |||||||||||||  ||||||||| |  | ||||||||| ||| || |||||| |||    
T  40722650 ctgtttggataaacaacttaatcaagtgcttattgtatgtgtgcttatgcataagctttttttataaca--aaataaaataaagtcgaactgttttcata 40722553  T
Q  399 taagct 404  Q
    ||||||    
T  40722552 taagct 40722547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 43199380 - 43199442
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||||| | ||  |||||||||||||||| |||||||| ||||||||||    
T  43199380 agataaaataaagttaaattatcttcgtataagctataagttgttttcataaactatcctgga 43199442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 1625871 - 1625928
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| || ||||||||||  |||||| ||||||||| |||||||||||||| ||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttgga 1625928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 3423872 - 3423827
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctt 415  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||    
T  3423872 agataaaataaagtcaaattattttcatataacctataagttgctt 3423827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 496
Target Start/End: Complemental strand, 5759585 - 5759529
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||| |||||| ||| || ||||| | ||||||||||||||||||||||||    
T  5759585 atggacatgtc-taagctgtttccataagctctcccaaacagtctcacaagtacttat 5759529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 9886304 - 9886341
Alignment:
Q  396 atataagctataagttgctttcataagctatcctggaa 433  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  9886304 atataagctataagttgttttcctaagctatcctggaa 9886341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 14666514 - 14666571
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| |||||| || ||| ||||||| ||||||||| ||||| ||||||||    
T  14666514 agataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 33197438 - 33197397
Alignment:
Q  291 actaagacgctgtttggataaacaacttaattaaacacttat 332  Q
    |||||| | |||||||||||||||||| ||||||||||||||    
T  33197438 actaaggctctgtttggataaacaactaaattaaacacttat 33197397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 33256705 - 33256766
Alignment:
Q  369 tagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||||| |||||| |||||| |||||| |||||||  | |||||||||| ||||||    
T  33256705 tagataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctg 33256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 40279178 - 40279219
Alignment:
Q  385 aaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| |||||| ||||||||| |||||||||||||    
T  40279178 aaattgttttggtataagatataagttgttttcataagctat 40279219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 425
Target Start/End: Complemental strand, 43299536 - 43299451
Alignment:
Q  341 acttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatat-aagctataagttgctttcataagcta 425  Q
    ||||||| || ||| |||| ||||| || ||||||||||| |||||| ||||||  ||| || |||||||||| ||||||||||||    
T  43299536 acttatgaattagctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagcta 43299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 496
Target Start/End: Complemental strand, 44606121 - 44606064
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||||||| | |||||| ||| | ||||||||||||  ||||||||||||    
T  44606121 atggacatgtcataagttgttttcataagttcttccaaacagtcgtacaagtacttat 44606064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 2416279 - 2416331
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||| | || ||||||||||||||||||||||||| || ||| |||||    
T  2416279 agataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 7862740 - 7862776
Alignment:
Q  391 ttttgatataagctataagttgctttcataagctatc 427  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  7862740 ttttcatataagctataagttggtttcataagctatc 7862776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 9556206 - 9556270
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaag 435  Q
    |||||||||| |||||  |||||| ||| |||||||||  || |||||||||||||||| |||||    
T  9556206 gataaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaag 9556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 418
Target Start/End: Complemental strand, 11344416 - 11344340
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttca 418  Q
    ||||||||||||  |||| ||||| |  |||||||| || ||||||||||||| ||| ||||||||| ||| |||||    
T  11344416 cttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 29628830 - 29628774
Alignment:
Q  387 attgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||  |||||||||||||||| | |||||||||||| |||||| || |||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatgga 29628774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 428
Target Start/End: Original strand, 34926956 - 34926988
Alignment:
Q  396 atataagctataagttgctttcataagctatcc 428  Q
    ||||||||||||||||| |||||||||||||||    
T  34926956 atataagctataagttgttttcataagctatcc 34926988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 35485883 - 35485943
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    ||||||||||| |||||| | |||   |||||||||||||||| ||| |||||||||||||    
T  35485883 agataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctg 35485943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 489
Target Start/End: Complemental strand, 28340498 - 28340382
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttt 471  Q
    ||||||||| |||||| |||||| || |||| ||||||||| ||||| ||||||| ||||| || | |||||||||||||||| | |||||| |||| |     
T  28340498 ataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagcttatggacatgtcataagttgttttcataagc-tc 28340400  T
Q  472 tccaaacagtctcacaag 489  Q
    ||| ||||||||||||||    
T  28340399 tcccaacagtctcacaag 28340382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 5006613 - 5006540
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||||| |||||| |||||| ||||||| ||||| ||| |||||||||||| |||||| ||||||||||    
T  5006613 agataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagagttcatgga 5006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 12110326 - 12110383
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||    
T  12110326 agataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatc 12110383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 1417230 - 1417285
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||    
T  1417230 agataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 946718 - 946836
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| |||||||||||||  ||| || ||||||||| |||  | || ||||||| || | | ||| ||||||||||| ||||||||| ||| |    
T  946718 agataaaataaagtcaaattgttttcgtattagttataagttgtttttgtgagttatcctgaaaggctaatgaacatgtcataaactattttcataagtt 946817  T
Q  470 tttccaaacagtctcacaa 488  Q
     ||| ||||||||||||||    
T  946818 cttctaaacagtctcacaa 946836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 28340962 - 28340889
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||||||  |||| |||| | ||||||||||| | |||||||||||||| || ||||||||||||||||    
T  28340962 atttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcct 28340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 17759557 - 17759636
Alignment:
Q  411 tgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||||||||||| |||||||||||  ||||||||||| |||||||| |||| | ||||||| |||| || |||| |||||    
T  17759557 tgctttcataagatatcctggaaaactcatggacatggcataagctgttttgataagctttcccaaccactctcccaagt 17759636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 27548229 - 27548291
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| ||| ||||||||| || ||||||||||| || |||||||||||||| ||||    
T  27548229 agataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttgga 27548291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 30456554 - 30456492
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| ||||||||||||| ||||||| ||||||| | |||||||| ||||| ||||    
T  30456554 agataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttgga 30456492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 40689090 - 40689028
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| || ||||| |||| |||||||||||||| ||  ||||||||||||||||||    
T  40689090 agataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctgga 40689028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 47046211 - 47046153
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||||| ||||||||||||| |||||||||   ||||| ||||||||||||||||    
T  47046211 gataaaataaagtcaaattgttttcatataagctccgagttgttttcataagctatcct 47046153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 48157238 - 48157168
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||| |||||||  ||||||||||| || |||||||||| ||||||||||||| ||| ||||| |||||||    
T  48157238 atttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctat 48157168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 495
Target Start/End: Complemental strand, 22388503 - 22388447
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtactta 495  Q
    |||||||| || |||||||||| || ||||||| ||||||||||||||||| |||||    
T  22388503 atggacatatcttaagctatttccataagctttaccaaacagtctcacaagcactta 22388447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 490
Target Start/End: Complemental strand, 29574668 - 29574585
Alignment:
Q  407 aagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    |||||| ||||||| |||||| |||| || | |||||||||||||||||| ||| || ||| | | | ||||||||||||||||    
T  29574668 aagttgttttcatatgctatcatggagaggttatggacatgtcataagctgtttccataagttctccgaaacagtctcacaagt 29574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 31338474 - 31338533
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||| || ||||| |||||||    
T  31338474 agataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcct 31338533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 491
Target Start/End: Original strand, 33933852 - 33933903
Alignment:
Q  440 tggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagta 491  Q
    ||||||||||||||||||||| || ||| ||| |||||||||| ||||||||    
T  33933852 tggacatgtcataagctatttccataagttttaccaaacagtcgcacaagta 33933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 35536045 - 35536112
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataag 409  Q
    |||||| |||||| |||| ||||| |  ||||||||||| ||||||||||||| ||||||| ||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 38010680 - 38010739
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||||| || | ||||||||||| |||||||||||||| || |||||||| |||||||    
T  38010680 agataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 38010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 2221847 - 2221877
Alignment:
Q  302 gtttggataaacaacttaattaaacacttat 332  Q
    |||||||||||||||||||||||||||||||    
T  2221847 gtttggataaacaacttaattaaacacttat 2221877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 9527194 - 9527140
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagct 424  Q
    ||||| ||||| |||||| |||||| |||||| |||||||||| |||||||||||    
T  9527194 agatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 17989125 - 17989067
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    ||||||||| |||||| |||||| |||||| |||||| ||| ||||||||||| |||||    
T  17989125 ataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctg 17989067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 18350796 - 18350718
Alignment:
Q  385 aaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttca 463  Q
    ||||||||||  |||||| |||||| || |||||||||||||| |||| || | ||| ||||||  |||||||||||||    
T  18350796 aaattgttttcgtataagttataagctgttttcataagctatcatggagagcttatgaacatgttttaagctattttca 18350718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 22759152 - 22759210
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    ||||||||||| |  |||||||||| |||||||||| ||| || |||||||||||||||    
T  22759152 agataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatcc 22759210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 23918923 - 23918961
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataa 408  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  23918923 agataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 46825064 - 46825126
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| ||||||||||||| |||||||| ||||   | |||||||||||||| ||||    
T  46825064 agataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttgga 46825126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 18516349 - 18516296
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||| |||||||||| || ||||||||||||||||| || |||| ||||||    
T  18516349 aaaataaagtcaaattgtgttcatataagctataagttgtttccatatgctatc 18516296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 485
Target Start/End: Original strand, 25422318 - 25422431
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttt 471  Q
    ||||||||| || ||||| |||  |||| |||||||| ||| ||||| | |||||| |||| |||| ||  |||||||||||| | ||| || ||||| |    
T  25422318 ataaaataaagttaaattctttccatattagctataaattgttttcacaggctatcatggagagtttataaacatgtcataaggtgtttccataagctct 25422417  T
Q  472 tccaaacagtctca 485  Q
     |||||||||||||    
T  25422418 cccaaacagtctca 25422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 496
Target Start/End: Original strand, 33894686 - 33894743
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||||| ||| |||||| ||||| |  ||||||||||||||||| |||||    
T  33894686 atggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttat 33894743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 39518806 - 39518851
Alignment:
Q  381 ggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||||||  ||||||||| ||||||| |||||||||||||    
T  39518806 ggtcaaattgtttgcatataagctttaagttgttttcataagctat 39518851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 44821930 - 44821987
Alignment:
Q  375 aaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||| |||||||||||||  |||||| |||||| || ||||||||||||| |||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctgga 44821987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 329
Target Start/End: Complemental strand, 47046302 - 47046273
Alignment:
Q  300 ctgtttggataaacaacttaattaaacact 329  Q
    ||||||||||||||||||||||||||||||    
T  47046302 ctgtttggataaacaacttaattaaacact 47046273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 420
Target Start/End: Original strand, 49060479 - 49060556
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcata 420  Q
    ||||| |||||| |||| ||||| |  | ||||||||| |||||||| |||| ||||||||||||||||  |||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 5369789 - 5369737
Alignment:
Q  376 aataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    ||||| |||||| |||||| ||||| |||||||| || |||||||||||||||    
T  5369789 aataaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 22759064 - 22759096
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  22759064 ctgtttggataaacaacttaattaagcacttat 22759096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 24909642 - 24909682
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataag 422  Q
    |||||||| |||| ||||||||||||||||| |||||||||    
T  24909642 gtcaaattattttcatataagctataagttgttttcataag 24909682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 27708966 - 27708934
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  27708966 ctgtttggataaacaacttaattaagcacttat 27708934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 31691302 - 31691270
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  31691302 ctgtttggataaacaacttaattaagcacttat 31691270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 45813284 - 45813236
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttca 418  Q
    ||||||||||| ||||| ||||||| |||||| |||||||||| |||||    
T  45813284 agataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 7218175 - 7218116
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctgga 7218116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 25006135 - 25006076
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttgga 25006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 17269220 - 17269278
Alignment:
Q  374 aaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctgga 17269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27738284 - 27738228
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  27738284 agataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 25479547 - 25479606
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    ||||||||||| |||||||||| || ||||| ||||||||||| ||||||||||||||||    
T  25479547 agataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcct 25479606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 25005889 - 25005839
Alignment:
Q  382 gtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  25005889 gtcaacttgttttcatataagctataagttgttttcataagctatcctgga 25005839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 488
Target Start/End: Complemental strand, 47002978 - 47002861
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagct 469  Q
    ||||||||||| || |||||||||| ||| ||| || || ||| |||||||||||||| || | |||| |||||||||||||||| | |||||| || |     
T  47002978 agataaaataaagttaaattgtttttatacaagttagaaattgttttcataagctatcatgtagagtttatggacatgtcataagttgttttcataa-cc 47002880  T
Q  470 tttccaaacagtctcacaa 488  Q
    |||||||||| | ||||||    
T  47002879 tttccaaacaatttcacaa 47002861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 34179976 - 34179903
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||||| ||||||||||||| || ||||||||||  || |||||||| |||||||| |||||| |||||    
T  34179976 agataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatgga 34179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 40304179 - 40304071
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgt 448  Q
    |||||| |||| ||||| |  |||||||||||  ||| |||||||| ||||||| |||||| || |||||||| ||||||| || |||| |||| |||||    
T  40304179 ataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa-ctatcctagatagtttatgggcatgt 40304081  T
Q  449 cataagctat 458  Q
    ||||||||||    
T  40304080 cataagctat 40304071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 30371114 - 30371166
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||||||||    
T  30371114 agataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 33186082 - 33186002
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcct 429  Q
    |||||| |||| ||| | || ||||||||||||||| ||||||||| ||| ||| ||||||||| ||| ||||||||||||    
T  33186082 ataagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagttgtttttataagctatcct 33186002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 5592789 - 5592734
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||||||    
T  5592789 agataaaataaagtcgaattgttgtcatataagctataagttgttttcataagcta 5592734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 28467411 - 28467356
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||    
T  28467411 agataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 49517036 - 49517091
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagcta 425  Q
    ||||||||||| ||||||||||||| || ||||||||||| || ||||||||||||    
T  49517036 agataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 497
Target Start/End: Complemental strand, 14737737 - 14737679
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttatt 497  Q
    |||||||||| ||||| |||||||| ||| ||| |||||||||||||||||| ||||||    
T  14737737 atggacatgttataagttattttcacaagttttcccaaacagtctcacaagtgcttatt 14737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 496
Target Start/End: Original strand, 16980821 - 16980919
Alignment:
Q  398 ataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    |||||||||||| || |||||| |||||| |||||||||| ||| | ||||| |||| | ||| || ||||| |  |||| ||||||||||||||||||    
T  16980821 ataagctataagctgttttcattagctattctggaaagtttatgaaaatgtcgtaagttgtttccataagctctctcaaatagtctcacaagtacttat 16980919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 456
Target Start/End: Complemental strand, 26293188 - 26293146
Alignment:
Q  414 tttcataagctatcctggaaagttcatggacatgtcataagct 456  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  26293188 tttcataagctatcctggaaagtttatggacatctcataagct 26293146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 30257649 - 30257711
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||| |||||| |||||  ||||||||| ||||||| |||||||| ||||||||||    
T  30257649 agataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctgga 30257711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 2773739 - 2773674
Alignment:
Q  339 gtacttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagct 404  Q
    |||||||||||||||| ||||  |||| || |||||||||||  |||||||||||| |||||||||    
T  2773739 gtacttatgcataagctatttccataacagaagataaaataatttcaaattgttttaatataagct 2773674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 5422024 - 5421967
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||  |||||||||||||  |||||||||||||||| ||| ||||||||||    
T  5422024 agataaaatatagtcaaattgttttcttataagctataagttgttttgataagctatc 5421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 434
Target Start/End: Original strand, 8130409 - 8130466
Alignment:
Q  377 ataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaa 434  Q
    |||| |||||| |||||| | ||||||||||||||| |||||||||||||| ||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatcatggaaa 8130466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 34619510 - 34619445
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctata 407  Q
    |||||| ||||||||||| ||||| |  |||||||||||||| ||||||||||  |||||||||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagctata 34619445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 45205034 - 45205107
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||||||| |||||| | |||  |||||||||| |||||| |||||||||||||| || | ||||||||||    
T  45205034 agataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatgga 45205107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 439 - 496
Target Start/End: Complemental strand, 49692063 - 49692006
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||||||||||| |||||    
T  49692063 atggacatgtcataagctattttcataagttctctcaaacagtctcacaagttcttat 49692006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 4200181 - 4200257
Alignment:
Q  356 atttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||| |  ||||||||||| ||||| ||||||| ||||||||||||  ||| |||| |||| |||||||||    
T  4200181 atttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctgga 4200257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 9656618 - 9656678
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||| || ||||| |||| |||||||||||||| ||  ||||||||||||||||||    
T  9656618 ataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctgga 9656678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 12564969 - 12564921
Alignment:
Q  379 aaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  12564969 aaggccaaactgttttcatataagctataagttgttttcataagctatc 12564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 29046002 - 29045954
Alignment:
Q  384 caaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||| | ||||||||||||||||| ||||||||||| |||||||    
T  29046002 caaattgttctcatataagctataagttgttttcataagctgtcctgga 29045954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 463
Target Start/End: Original strand, 37841965 - 37842057
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagctattttca 463  Q
    |||||||||| || ||||||||||  ||||||||||| |||| |  ||||||||||| |||| || | ||| |||  ||||||||||||||||    
T  37841965 gataaaataaagttaaattgttttcgtataagctatatgttgttcgcataagctatcatggacagcttatgaacacttcataagctattttca 37842057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 4034116 - 4034061
Alignment:
Q  373 taaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcc 428  Q
    |||||||| |||||| |||| | | |||||||||||||| ||||||||||||||||    
T  4034116 taaaataaagtcaaaatgttatcacataagctataagttactttcataagctatcc 4034061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 10581180 - 10581125
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||||||| |||||| | |||| || |||||||||||||| |||||||||||||    
T  10581180 gataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 488
Target Start/End: Original strand, 27976670 - 27976712
Alignment:
Q  445 atgtcataagctattttcaaaagcttttccaaacagtctcacaa 488  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  27976670 atgtcataagctattttcaaaag-ttttccaaacagtctaacaa 27976712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 31623990 - 31624045
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    |||||| ||| |||||||||| |||||||| ||||||||||| | |||||||||||    
T  31623990 gataaattaaagtcaaattgtattgatatatgctataagttgttatcataagctat 31624045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 332
Target Start/End: Complemental strand, 35667013 - 35666982
Alignment:
Q  301 tgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||||||||||    
T  35667013 tgtttggataaacaacttaattaaacacttat 35666982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 490
Target Start/End: Original strand, 44422758 - 44422809
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagt 490  Q
    ||||||||||||||||||||||||| ||||| | ||| ||||||||| ||||    
T  44422758 atggacatgtcataagctattttcataagctctcccagacagtctcaaaagt 44422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 2487899 - 2487841
Alignment:
Q  372 ataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    ||||| ||| |||||||| ||| |||||||||||||||||  |||||||| ||||||||    
T  2487899 ataaagtaaagtcaaattatttggatataagctataagttattttcataaactatcctg 2487841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 412
Target Start/End: Original strand, 15360860 - 15360902
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttg 412  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  15360860 agataaaataaagtcaaactgttttcatataagctataagttg 15360902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 32555701 - 32555735
Alignment:
Q  298 cgctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||||| |||||||    
T  32555701 cgctgtttggataaacaacttaattaagcacttat 32555735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 35017511 - 35017604
Alignment:
Q  341 acttatgcataagccatttttataatagtagataaaataaggtcaa--attgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||| |||||| ||||||||||||  ||||||||||| |||||  | ||||||  ||||| ||||| | || ||||||||||| |||||||    
T  35017511 acttatgaataagctatttttataatacaagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctgga 35017604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 6933086 - 6933013
Alignment:
Q  349 ataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataag 422  Q
    ||||||||||||||||| |  | ||||||||| ||||||||||||| ||| ||| ||| ||||  |||||||||    
T  6933086 ataagccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataag 6933013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 15361679 - 15361752
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatgga 443  Q
    ||||||| ||| |||||||| |||| |||||||||||||| || ||||||||| ||| || || |||| |||||    
T  15361679 agataaagtaaagtcaaattattttcatataagctataagctgttttcataagatattcttgagagtttatgga 15361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 432
Target Start/End: Complemental strand, 17423041 - 17422980
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    |||||||||| |||||  || ||| ||||||||||||||||| ||||||| |||||| ||||    
T  17423041 gataaaataaagtcaagctgatttcatataagctataagttgttttcatatgctatcatgga 17422980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 42556709 - 42556668
Alignment:
Q  396 atataagctataagttgctttcataagctatcctggaaagtt 437  Q
    ||||||||||||||||| |||||||||||||| |||| ||||    
T  42556709 atataagctataagttgttttcataagctatcatggagagtt 42556668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 44032130 - 44032065
Alignment:
Q  343 ttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataa 408  Q
    ||||| ||||||| ||| ||||| |  || |||||||| ||||||||||||| |||||||||||||    
T  44032130 ttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 432
Target Start/End: Original strand, 44422666 - 44422727
Alignment:
Q  371 gataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctgga 432  Q
    ||||||||||  ||||| |||||| |||||||||||||| |  ||| |||||||||||||||    
T  44422666 gataaaataatctcaaactgttttcatataagctataagctatttttataagctatcctgga 44422727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 49888733 - 49888790
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    ||||||||||| ||  |||||||||  |||||||||| ||||| ||||||||||||||    
T  49888733 agataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 49888790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 4363736 - 4363676
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||| |||||| |||||| |||||| |||||||||||||  |  |||||||||||||||||    
T  4363736 agattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctg 4363676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 6933149 - 6933117
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||| |||||||    
T  6933149 ctgtttggataaacaacttaattaagcacttat 6933117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 21516253 - 21516285
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    ||||||||||||||||||||||||||| |||||    
T  21516253 ctgtttggataaacaacttaattaaacgcttat 21516285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 29723455 - 29723515
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatcctg 430  Q
    |||||||||||  ||||| | |||| ||||| ||||||||||||||||| |||||| ||||    
T  29723455 agataaaataaactcaaactattttcatatatgctataagttgctttcacaagctaccctg 29723515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 45990162 - 45990122
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagt 410  Q
    ||||||||||| || |||||||||| |||||||||||||||    
T  45990162 agataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 48830180 - 48830124
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| |||||| | |||| |||||||||||||  || |||||||||||||    
T  48830180 agataaaataaagtcaaactattttcatataagctataaactgttttcataagctat 48830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 27514 - 27599
Alignment:
Q  342 cttatgcataagccatttttataatagtagataaaataaggtcaaattgttttgatataagctataagttgctttcataagctatc 427  Q
    |||||| |||||  |||| ||||| || ||||||||||| ||||||||||||| |||||| |||||||||| |||||||| |||||    
T  27514 cttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 23806 - 23838
Alignment:
Q  300 ctgtttggataaacaacttaattaaacacttat 332  Q
    |||||||||||||||||||||||||||||||||    
T  23806 ctgtttggataaacaacttaattaaacacttat 23838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 492
Target Start/End: Original strand, 27640 - 27688
Alignment:
Q  444 catgtcataagctattttcaaaagcttttccaaacagtctcacaagtac 492  Q
    ||||||||||||||||| || ||||| | ||||||||||||| ||||||    
T  27640 catgtcataagctatttccataagctctcccaaacagtctcagaagtac 27688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 35885 - 35813
Alignment:
Q  383 tcaaattgttttgatataagctataagttgctttcataagctatcctggaaagttcatggacatgtcataagct 456  Q
    ||||||| |||| |||||||||||| | ||||||||||| |||||||||| || | ||||||||||||||||||    
T  35885 tcaaattatttttatataagctata-gctgctttcataaactatcctggagagcttatggacatgtcataagct 35813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 496
Target Start/End: Complemental strand, 10628 - 10571
Alignment:
Q  439 atggacatgtcataagctattttcaaaagcttttccaaacagtctcacaagtacttat 496  Q
    ||||||||||||| || | ||| || |||||||  |||||||||||||||||||||||    
T  10628 atggacatgtcattagttgtttacataagctttgtcaaacagtctcacaagtacttat 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 1828 - 1772
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || || || |||| ||||| ||||||||||| |||||||||||||    
T  1828 agataaaataaagttaatttattttcatatacgctataagttggtttcataagctat 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 3918 - 3862
Alignment:
Q  370 agataaaataaggtcaaattgttttgatataagctataagttgctttcataagctat 426  Q
    ||||||||||| || || || |||| ||||| ||||||||||| |||||||||||||    
T  3918 agataaaataaagttaatttattttcatatacgctataagttggtttcataagctat 3862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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