View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9532_low_22 (Length: 352)

Name: NF9532_low_22
Description: NF9532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9532_low_22
NF9532_low_22
[»] chr3 (69 HSPs)
chr3 (249-335)||(40955378-40955464)
chr3 (1-86)||(40690988-40691073)
chr3 (1-81)||(10298032-10298112)
chr3 (1-79)||(49823380-49823458)
chr3 (1-78)||(19557052-19557129)
chr3 (1-78)||(48340450-48340527)
chr3 (1-81)||(17653765-17653845)
chr3 (1-80)||(8817384-8817463)
chr3 (1-79)||(8437478-8437556)
chr3 (1-79)||(22721984-22722062)
chr3 (1-79)||(37508974-37509052)
chr3 (1-79)||(51406726-51406804)
chr3 (1-78)||(2787832-2787909)
chr3 (1-78)||(34080030-34080107)
chr3 (1-78)||(38964445-38964522)
chr3 (1-81)||(36095677-36095757)
chr3 (1-79)||(4238647-4238725)
chr3 (1-75)||(9111497-9111571)
chr3 (1-75)||(42507358-42507432)
chr3 (1-79)||(46208083-46208161)
chr3 (1-78)||(21295326-21295403)
chr3 (1-78)||(35513526-35513603)
chr3 (1-78)||(44785396-44785473)
chr3 (1-78)||(6013336-6013413)
chr3 (157-227)||(1801496-1801566)
chr3 (1-78)||(42170346-42170423)
chr3 (178-246)||(1801566-1801634)
chr3 (156-239)||(47677304-47677387)
chr3 (1-79)||(33942931-33943009)
chr3 (157-246)||(41752954-41753052)
chr3 (119-247)||(51046077-51046222)
chr3 (156-239)||(29031763-29031846)
chr3 (156-237)||(30476523-30476604)
chr3 (160-218)||(43139762-43139820)
chr3 (77-117)||(40955339-40955379)
chr3 (23-81)||(9027139-9027197)
chr3 (156-206)||(33689215-33689265)
chr3 (13-78)||(34988140-34988205)
chr3 (156-213)||(47492096-47492153)
chr3 (161-217)||(50524730-50524786)
chr3 (165-232)||(39385746-39385813)
chr3 (156-218)||(30580805-30580867)
chr3 (156-218)||(30734451-30734513)
chr3 (22-78)||(2131746-2131802)
chr3 (32-80)||(8437423-8437471)
chr3 (22-81)||(9213513-9213572)
chr3 (22-86)||(34988067-34988131)
chr3 (32-80)||(38964390-38964438)
chr3 (32-79)||(46208029-46208076)
chr3 (11-78)||(47188936-47189003)
chr3 (32-78)||(17653712-17653758)
chr3 (121-163)||(18321657-18321699)
chr3 (32-78)||(37508921-37508967)
chr3 (20-86)||(42299637-42299703)
chr3 (185-239)||(49414501-49414555)
chr3 (13-78)||(5323272-5323337)
chr3 (22-71)||(8092595-8092644)
chr3 (130-163)||(21024109-21024142)
chr3 (32-81)||(44785480-44785529)
chr3 (19-80)||(45652067-45652128)
chr3 (119-164)||(51046162-51046207)
chr3 (22-80)||(55249928-55249988)
chr3 (32-80)||(4238592-4238640)
chr3 (32-80)||(21295410-21295458)
chr3 (32-80)||(22721929-22721977)
chr3 (183-239)||(33689252-33689308)
chr3 (32-80)||(34080114-34080162)
chr3 (51-79)||(40215022-40215050)
chr3 (156-184)||(55223293-55223321)
[»] chr8 (65 HSPs)
chr8 (1-80)||(44498185-44498264)
chr8 (1-82)||(39571199-39571280)
chr8 (1-81)||(7012224-7012304)
chr8 (1-80)||(7785776-7785855)
chr8 (1-79)||(54611-54689)
chr8 (1-79)||(2890161-2890239)
chr8 (1-78)||(6552708-6552785)
chr8 (1-78)||(33289261-33289338)
chr8 (1-81)||(12763651-12763731)
chr8 (1-81)||(32211360-32211440)
chr8 (1-80)||(7805697-7805776)
chr8 (1-79)||(25600999-25601077)
chr8 (1-79)||(43199353-43199431)
chr8 (1-78)||(3304278-3304355)
chr8 (1-81)||(32114472-32114552)
chr8 (1-78)||(31654666-31654743)
chr8 (1-81)||(15888349-15888429)
chr8 (1-72)||(12343146-12343217)
chr8 (160-246)||(39850954-39851040)
chr8 (1-79)||(13578910-13578988)
chr8 (156-245)||(35441018-35441116)
chr8 (156-248)||(5033149-5033250)
chr8 (155-247)||(34541851-34541942)
chr8 (1-80)||(27422243-27422322)
chr8 (1-79)||(8587223-8587301)
chr8 (156-239)||(6296611-6296694)
chr8 (156-246)||(33841640-33841739)
chr8 (157-246)||(8243438-8243536)
chr8 (156-217)||(4958627-4958688)
chr8 (156-221)||(10086781-10086846)
chr8 (119-218)||(5667124-5667231)
chr8 (155-206)||(34229680-34229731)
chr8 (24-78)||(8587170-8587224)
chr8 (156-206)||(8796461-8796511)
chr8 (209-247)||(22649834-22649872)
chr8 (119-218)||(45191131-45191238)
chr8 (24-73)||(28463616-28463665)
chr8 (23-80)||(33057592-33057649)
chr8 (119-163)||(5667101-5667145)
chr8 (183-239)||(8243394-8243450)
chr8 (4-63)||(17006967-17007026)
chr8 (4-63)||(17570221-17570280)
chr8 (175-217)||(2581853-2581895)
chr8 (32-78)||(7012171-7012217)
chr8 (1-79)||(28463664-28463742)
chr8 (32-78)||(31654613-31654659)
chr8 (9-79)||(33057655-33057725)
chr8 (32-78)||(39571287-39571333)
chr8 (32-81)||(4245665-4245714)
chr8 (209-246)||(5667208-5667245)
chr8 (22-75)||(17006914-17006967)
chr8 (22-75)||(17570280-17570333)
chr8 (14-71)||(24691986-24692043)
chr8 (22-83)||(24692052-24692113)
chr8 (39-80)||(33289352-33289393)
chr8 (32-80)||(54696-54744)
chr8 (32-80)||(2890246-2890294)
chr8 (32-80)||(7785862-7785910)
chr8 (32-80)||(7805783-7805831)
chr8 (22-70)||(15688038-15688086)
chr8 (182-218)||(22649872-22649908)
chr8 (25-77)||(30171483-30171535)
chr8 (156-184)||(31159912-31159940)
chr8 (51-79)||(41915592-41915620)
chr8 (45-81)||(43332556-43332592)
[»] chr7 (54 HSPs)
chr7 (1-79)||(28536750-28536828)
chr7 (1-80)||(1738445-1738524)
chr7 (1-80)||(7240802-7240881)
chr7 (159-246)||(29053366-29053453)
chr7 (1-79)||(9268809-9268887)
chr7 (1-78)||(46840913-46840990)
chr7 (1-80)||(7482278-7482357)
chr7 (1-80)||(38063911-38063990)
chr7 (1-79)||(4790301-4790379)
chr7 (1-78)||(22285752-22285829)
chr7 (1-78)||(23314139-23314216)
chr7 (1-78)||(31319399-31319476)
chr7 (1-80)||(36583448-36583527)
chr7 (1-79)||(1565728-1565806)
chr7 (1-78)||(94318-94395)
chr7 (1-78)||(38441513-38441590)
chr7 (1-72)||(33418429-33418500)
chr7 (1-78)||(36016196-36016273)
chr7 (157-218)||(7671961-7672022)
chr7 (159-243)||(42628297-42628381)
chr7 (156-246)||(11016859-11016958)
chr7 (157-247)||(34854745-34854844)
chr7 (156-218)||(15027569-15027631)
chr7 (1-78)||(9575462-9575539)
chr7 (157-247)||(38975794-38975893)
chr7 (160-218)||(22764753-22764811)
chr7 (156-218)||(27028842-27028904)
chr7 (1-71)||(40840126-40840196)
chr7 (159-247)||(41018280-41018377)
chr7 (156-237)||(4649328-4649411)
chr7 (183-239)||(34854701-34854757)
chr7 (157-213)||(48000769-48000825)
chr7 (7-71)||(7269412-7269476)
chr7 (19-79)||(7661147-7661207)
chr7 (156-206)||(4290584-4290634)
chr7 (195-237)||(29053322-29053364)
chr7 (32-80)||(22285697-22285745)
chr7 (157-217)||(30217504-30217564)
chr7 (141-218)||(45231880-45231961)
chr7 (13-68)||(2853681-2853736)
chr7 (192-239)||(10419543-10419590)
chr7 (53-88)||(28677306-28677341)
chr7 (25-79)||(7661075-7661129)
chr7 (32-78)||(36016280-36016326)
chr7 (193-239)||(45231860-45231906)
chr7 (32-82)||(46840856-46840906)
chr7 (32-81)||(1565813-1565862)
chr7 (119-164)||(4290549-4290594)
chr7 (50-79)||(5347721-5347750)
chr7 (21-78)||(7269478-7269535)
chr7 (119-164)||(34854784-34854829)
chr7 (13-66)||(39019840-39019893)
chr7 (32-80)||(1738531-1738579)
chr7 (32-80)||(7240747-7240795)
[»] chr4 (69 HSPs)
chr4 (1-79)||(53337423-53337501)
chr4 (1-78)||(6121893-6121970)
chr4 (1-78)||(47833664-47833741)
chr4 (1-80)||(3422113-3422192)
chr4 (1-80)||(33621849-33621928)
chr4 (1-80)||(47838615-47838694)
chr4 (1-80)||(48336316-48336395)
chr4 (1-79)||(3993029-3993107)
chr4 (156-246)||(42375009-42375099)
chr4 (1-78)||(3372174-3372251)
chr4 (1-78)||(20538686-20538763)
chr4 (1-78)||(42797785-42797862)
chr4 (1-78)||(46797778-46797855)
chr4 (156-249)||(47404634-47404727)
chr4 (138-218)||(30861805-30861885)
chr4 (2-78)||(51894582-51894658)
chr4 (1-80)||(5986929-5987008)
chr4 (1-80)||(41469764-41469843)
chr4 (1-79)||(3904682-3904760)
chr4 (1-79)||(24704423-24704501)
chr4 (1-79)||(52756728-52756806)
chr4 (1-78)||(43900602-43900679)
chr4 (156-232)||(40789192-40789268)
chr4 (1-77)||(40913190-40913266)
chr4 (1-88)||(7579363-7579450)
chr4 (156-246)||(31430510-31430597)
chr4 (156-239)||(52028555-52028638)
chr4 (156-239)||(55090045-55090128)
chr4 (1-78)||(41615676-41615753)
chr4 (156-247)||(6271691-6271791)
chr4 (156-218)||(23444318-23444380)
chr4 (156-218)||(47661869-47661931)
chr4 (156-218)||(51265472-51265534)
chr4 (156-246)||(53954609-53954699)
chr4 (7-81)||(17344272-17344346)
chr4 (7-73)||(45478151-45478217)
chr4 (127-218)||(47762635-47762734)
chr4 (11-78)||(4780358-4780425)
chr4 (1-59)||(33551254-33551312)
chr4 (156-244)||(38714824-38714912)
chr4 (24-79)||(17236864-17236919)
chr4 (32-79)||(40913273-40913320)
chr4 (156-195)||(45591459-45591498)
chr4 (1-59)||(26231630-26231688)
chr4 (156-218)||(35682193-35682255)
chr4 (157-239)||(24006120-24006194)
chr4 (119-164)||(30861863-30861908)
chr4 (32-81)||(43900546-43900595)
chr4 (183-239)||(40789255-40789311)
chr4 (183-239)||(50384111-50384167)
chr4 (1-65)||(50430431-50430495)
chr4 (183-239)||(55090002-55090058)
chr4 (155-190)||(28693971-28694006)
chr4 (156-187)||(50384154-50384185)
chr4 (32-78)||(6121977-6122023)
chr4 (156-217)||(26186065-26186124)
chr4 (22-78)||(1716301-1716357)
chr4 (119-164)||(6271706-6271751)
chr4 (22-79)||(17344212-17344269)
chr4 (22-78)||(44900080-44900136)
chr4 (32-80)||(3372119-3372167)
chr4 (32-80)||(3992974-3993022)
chr4 (51-87)||(4758899-4758935)
chr4 (183-239)||(24006076-24006132)
chr4 (119-163)||(35682170-35682214)
chr4 (183-239)||(47404591-47404647)
chr4 (32-80)||(47833609-47833657)
chr4 (32-80)||(48336261-48336309)
chr4 (45-85)||(55292104-55292144)
[»] chr2 (52 HSPs)
chr2 (1-83)||(3055611-3055693)
chr2 (1-79)||(13344537-13344615)
chr2 (157-246)||(6217274-6217363)
chr2 (1-86)||(37990005-37990090)
chr2 (1-80)||(6648517-6648596)
chr2 (1-80)||(9047753-9047832)
chr2 (1-80)||(41478637-41478716)
chr2 (1-79)||(38917521-38917599)
chr2 (1-79)||(44398739-44398817)
chr2 (1-78)||(12337937-12338014)
chr2 (1-78)||(13197710-13197787)
chr2 (1-78)||(15896895-15896972)
chr2 (1-80)||(16243781-16243860)
chr2 (1-79)||(44397600-44397678)
chr2 (1-78)||(15372279-15372356)
chr2 (160-245)||(29925623-29925708)
chr2 (156-248)||(38933584-38933676)
chr2 (1-80)||(37666608-37666687)
chr2 (1-80)||(41492894-41492973)
chr2 (1-78)||(16044317-16044394)
chr2 (1-79)||(30099181-30099259)
chr2 (157-246)||(37961705-37961794)
chr2 (1-75)||(44804581-44804655)
chr2 (156-247)||(15011284-15011369)
chr2 (156-239)||(2893969-2894052)
chr2 (156-239)||(14229402-14229484)
chr2 (157-246)||(29508741-29508839)
chr2 (156-233)||(2828596-2828673)
chr2 (156-247)||(16514413-16514513)
chr2 (1-80)||(12170397-12170476)
chr2 (159-215)||(14470644-14470700)
chr2 (183-242)||(15011356-15011415)
chr2 (20-79)||(30852689-30852748)
chr2 (1-59)||(4683951-4684009)
chr2 (4-75)||(16734839-16734910)
chr2 (156-218)||(6721978-6722040)
chr2 (209-246)||(37632981-37633018)
chr2 (50-80)||(13775832-13775862)
chr2 (119-206)||(14892300-14892394)
chr2 (209-239)||(32545899-32545929)
chr2 (13-78)||(13724102-13724167)
chr2 (119-164)||(29508780-29508825)
chr2 (32-81)||(41478723-41478772)
chr2 (50-79)||(42263468-42263497)
chr2 (194-242)||(9172984-9173032)
chr2 (119-163)||(14229357-14229401)
chr2 (19-63)||(15243990-15244034)
chr2 (19-79)||(15271053-15271113)
chr2 (32-80)||(15372224-15372272)
chr2 (32-80)||(37990097-37990145)
chr2 (1-37)||(41453112-41453148)
chr2 (11-67)||(44425028-44425084)
[»] chr6 (42 HSPs)
chr6 (1-82)||(33052790-33052871)
chr6 (1-81)||(9644749-9644829)
chr6 (1-81)||(9650766-9650846)
chr6 (1-80)||(26602376-26602455)
chr6 (1-79)||(6330168-6330246)
chr6 (1-79)||(11572144-11572222)
chr6 (1-79)||(13853592-13853670)
chr6 (1-78)||(2830388-2830465)
chr6 (1-78)||(8382969-8383046)
chr6 (1-81)||(8099583-8099663)
chr6 (1-79)||(6068619-6068697)
chr6 (156-246)||(12343099-12343189)
chr6 (1-79)||(35031000-35031078)
chr6 (1-78)||(8417793-8417870)
chr6 (1-79)||(22896515-22896593)
chr6 (1-79)||(28747133-28747211)
chr6 (1-78)||(6143607-6143684)
chr6 (1-78)||(17992041-17992118)
chr6 (156-247)||(10521898-10521989)
chr6 (165-239)||(31654311-31654385)
chr6 (157-218)||(551215-551276)
chr6 (4-79)||(3788093-3788168)
chr6 (7-78)||(7596977-7597048)
chr6 (160-239)||(24618654-24618733)
chr6 (22-78)||(8186441-8186497)
chr6 (156-218)||(17750929-17750991)
chr6 (156-221)||(24587485-24587550)
chr6 (156-239)||(2315353-2315436)
chr6 (192-239)||(10521855-10521902)
chr6 (155-200)||(13043502-13043547)
chr6 (183-239)||(551171-551227)
chr6 (11-59)||(33393165-33393213)
chr6 (24-83)||(8186364-8186423)
chr6 (119-164)||(551254-551299)
chr6 (130-163)||(17750917-17750950)
chr6 (119-164)||(24975756-24975801)
chr6 (32-80)||(6068564-6068612)
chr6 (32-80)||(8383053-8383101)
chr6 (9-37)||(13043819-13043847)
chr6 (24-80)||(14936533-14936589)
chr6 (50-78)||(22896471-22896499)
chr6 (32-80)||(33052878-33052926)
[»] chr1 (74 HSPs)
chr1 (1-78)||(26471065-26471142)
chr1 (1-80)||(14984890-14984969)
chr1 (1-78)||(11795986-11796063)
chr1 (1-78)||(27159358-27159435)
chr1 (1-78)||(31842795-31842872)
chr1 (1-78)||(39401966-39402043)
chr1 (1-78)||(44668093-44668170)
chr1 (1-81)||(1050941-1051021)
chr1 (1-81)||(34042749-34042829)
chr1 (156-247)||(8337900-8337991)
chr1 (1-80)||(9981700-9981779)
chr1 (1-79)||(25694372-25694450)
chr1 (1-79)||(47216698-47216776)
chr1 (1-78)||(47777481-47777558)
chr1 (1-80)||(47969748-47969827)
chr1 (1-79)||(17556806-17556884)
chr1 (156-237)||(29371376-29371457)
chr1 (1-80)||(12483626-12483705)
chr1 (156-247)||(34062207-34062298)
chr1 (1-72)||(44955212-44955283)
chr1 (158-247)||(49444964-49445051)
chr1 (7-82)||(11897113-11897188)
chr1 (1-80)||(47588335-47588414)
chr1 (156-245)||(46333995-46334084)
chr1 (156-247)||(29179646-29179746)
chr1 (1-78)||(11989834-11989911)
chr1 (1-58)||(23278021-23278078)
chr1 (141-206)||(36290441-36290506)
chr1 (156-246)||(48993966-48994065)
chr1 (157-215)||(5995399-5995457)
chr1 (157-218)||(44706834-44706895)
chr1 (156-247)||(37155035-37155135)
chr1 (156-239)||(15220817-15220900)
chr1 (4-79)||(37552197-37552272)
chr1 (156-206)||(1091593-1091643)
chr1 (156-218)||(4609023-4609085)
chr1 (22-79)||(16448182-16448239)
chr1 (156-221)||(17127613-17127678)
chr1 (183-239)||(28928785-28928841)
chr1 (156-239)||(47303401-47303484)
chr1 (161-247)||(48498404-48498499)
chr1 (156-218)||(741551-741613)
chr1 (156-218)||(32540797-32540859)
chr1 (156-237)||(38674554-38674633)
chr1 (22-79)||(11897053-11897110)
chr1 (139-218)||(5694914-5695000)
chr1 (155-215)||(9157340-9157400)
chr1 (1-64)||(12047159-12047223)
chr1 (156-195)||(28928828-28928867)
chr1 (4-78)||(16448108-16448182)
chr1 (1-81)||(1598379-1598457)
chr1 (32-80)||(25694317-25694365)
chr1 (156-187)||(1819538-1819569)
chr1 (13-80)||(5392211-5392278)
chr1 (15-81)||(31745204-31745271)
chr1 (183-246)||(38674504-38674567)
chr1 (192-239)||(48823891-48823938)
chr1 (1-63)||(571560-571622)
chr1 (160-206)||(45728326-45728372)
chr1 (181-246)||(46931987-46932061)
chr1 (119-164)||(5995373-5995418)
chr1 (130-163)||(6539669-6539702)
chr1 (32-81)||(11795930-11795979)
chr1 (169-218)||(21630069-21630118)
chr1 (11-71)||(12043666-12043726)
chr1 (22-70)||(12062568-12062616)
chr1 (32-80)||(12483712-12483760)
chr1 (32-80)||(26471149-26471197)
chr1 (32-80)||(27159442-27159490)
chr1 (119-163)||(36381596-36381640)
chr1 (119-163)||(37155050-37155094)
chr1 (32-80)||(44668177-44668225)
chr1 (183-239)||(46333952-46334008)
chr1 (156-224)||(48604996-48605064)
[»] scaffold0047 (1 HSPs)
scaffold0047 (156-244)||(63758-63846)
[»] chr5 (48 HSPs)
chr5 (1-81)||(41989404-41989484)
chr5 (1-80)||(9395403-9395482)
chr5 (1-80)||(26350348-26350427)
chr5 (4-79)||(37642010-37642085)
chr5 (1-79)||(21575999-21576077)
chr5 (1-79)||(36563537-36563615)
chr5 (156-245)||(3899839-3899928)
chr5 (1-80)||(13103077-13103156)
chr5 (1-79)||(11795221-11795299)
chr5 (156-246)||(16971143-16971233)
chr5 (1-78)||(6126877-6126954)
chr5 (1-78)||(23359995-23360072)
chr5 (1-78)||(37148955-37149032)
chr5 (7-79)||(17025683-17025755)
chr5 (1-80)||(13033104-13033183)
chr5 (1-78)||(20848127-20848203)
chr5 (156-247)||(19655147-19655247)
chr5 (1-75)||(4444013-4444087)
chr5 (119-247)||(29699371-29699501)
chr5 (1-78)||(583042-583118)
chr5 (134-239)||(28818923-28819036)
chr5 (156-246)||(2953197-2953279)
chr5 (6-80)||(966206-966280)
chr5 (156-218)||(3180109-3180171)
chr5 (156-218)||(16439165-16439227)
chr5 (160-246)||(19598322-19598417)
chr5 (156-239)||(26662405-26662488)
chr5 (156-239)||(26934000-26934083)
chr5 (156-239)||(38134422-38134505)
chr5 (156-218)||(291124-291186)
chr5 (156-218)||(16802471-16802533)
chr5 (119-244)||(2093941-2094074)
chr5 (136-188)||(39031180-39031232)
chr5 (160-218)||(12913830-12913888)
chr5 (11-75)||(9006885-9006949)
chr5 (32-80)||(20848072-20848120)
chr5 (1-64)||(2366352-2366415)
chr5 (1-36)||(13539909-13539944)
chr5 (34-80)||(37641951-37641997)
chr5 (48-78)||(38361713-38361743)
chr5 (51-80)||(1643466-1643495)
chr5 (11-72)||(3549553-3549614)
chr5 (141-169)||(2953224-2953252)
chr5 (11-59)||(3280421-3280469)
chr5 (134-162)||(17849236-17849264)
chr5 (6-70)||(36595782-36595846)
chr5 (32-80)||(37149039-37149087)
chr5 (1-65)||(39290827-39290891)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-80)||(12913-12992)
scaffold0482 (32-80)||(12858-12906)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-80)||(23838-23917)
scaffold0204 (32-80)||(23783-23831)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-78)||(49558-49635)
scaffold0009 (32-81)||(49502-49551)
[»] scaffold0464 (1 HSPs)
scaffold0464 (4-80)||(6129-6205)
[»] scaffold0016 (1 HSPs)
scaffold0016 (156-246)||(49752-49842)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-66)||(1388-1453)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-83)||(231298-231377)
scaffold0011 (22-78)||(231377-231433)
[»] scaffold0586 (1 HSPs)
scaffold0586 (156-218)||(7096-7158)
[»] scaffold0161 (1 HSPs)
scaffold0161 (164-218)||(27277-27331)
[»] scaffold1033 (1 HSPs)
scaffold1033 (156-187)||(2271-2302)
[»] scaffold1029 (1 HSPs)
scaffold1029 (156-187)||(2271-2302)
[»] scaffold0481 (1 HSPs)
scaffold0481 (156-190)||(2936-2970)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-73)||(312781-312843)
[»] scaffold0007 (2 HSPs)
scaffold0007 (51-80)||(77466-77495)
scaffold0007 (50-78)||(77344-77372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-79)||(492303-492332)
[»] scaffold0236 (1 HSPs)
scaffold0236 (53-81)||(16772-16800)


Alignment Details
Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 40955378 - 40955464
Alignment:
Q  249 cacggagaagcatatgttgtttgatattaaatgttaaaatctgtcggtggctttgtggtgctgttcacgagagttacccaaagttta 335  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40955378 cacggagaagcatatattgcttgatattaaatgttaaaatctgtcggtggctttgtggtgctgttcacgagagttacccaaagttta 40955464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40691073 - 40690988
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttgataa 86  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40691073 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattttataa 40690988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10298032 - 10298112
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  10298032 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 49823458 - 49823380
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  49823458 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19557129 - 19557052
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  19557129 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48340450 - 48340527
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  48340450 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17653765 - 17653845
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  17653765 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8817463 - 8817384
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  8817463 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8437478 - 8437556
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  8437478 atttggactgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22721984 - 22722062
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  22721984 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37508974 - 37509052
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  37508974 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 51406726 - 51406804
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  51406726 atttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2787909 - 2787832
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  2787909 atttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34080107 - 34080030
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  34080107 atttggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38964445 - 38964522
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  38964445 atttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36095757 - 36095677
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||    
T  36095757 atttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttgtaaataagaccggagtgagtattt 36095677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4238647 - 4238725
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| |||||    
T  4238647 atttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9111571 - 9111497
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  9111571 atttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42507432 - 42507358
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  42507432 atttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46208083 - 46208161
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  46208083 atttggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21295403 - 21295326
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  21295403 atttggactgaatttttaattagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35513526 - 35513603
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||    
T  35513526 atttggactgaatttttaactagatacatcaccttttattgatccagaattcttttataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44785473 - 44785396
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||    
T  44785473 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6013413 - 6013336
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||||||||||||||||||||    
T  6013413 atttggactgaatttttaactagataaatttacttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 1801496 - 1801566
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactcta 227  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||    
T  1801496 cacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactcta 1801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42170423 - 42170346
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||    
T  42170423 atttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 1801566 - 1801634
Alignment:
Q  178 agaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  1801566 agaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttcc 1801634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 47677304 - 47677387
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||   |||||||||  ||||||||||||| |||||    
T  47677304 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcacccaactctatgtcacacaagt 47677387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33943009 - 33942931
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||| | ||||||    
T  33943009 atttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggatcggcgagagtat 33942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 41753052 - 41752954
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  41753052 cacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 41752954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 51046077 - 51046222
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatca--------caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagcc 210  Q
    ||||||| |||| ||||||||||||||||||| |||||||        ||||| ||||||||||||||||||||||| || | ||||||||||||| |||    
T  51046077 tgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggcc 51046176  T
Q  211 aatgtcacta---------aactctatgtcacccaagtattttccg 247  Q
    |||||||| |         |||||||||||||||||||||||||||    
T  51046177 aatgtcaccaatgtcatccaactctatgtcacccaagtattttccg 51046222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 29031763 - 29031846
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||  ||||| ||||  ||||||||||||| |||||    
T  29031763 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacctaactctatgtcacacaagt 29031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 30476523 - 30476604
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaa 237  Q
    |||||||||||||||||||||||||||||||| || |||| ||||||||||  ||||||||||  |||||||| || |||||    
T  30476523 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcacataactctatatcccccaa 30476604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 43139762 - 43139820
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||    
T  43139762 aatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcac 43139820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 40955339 - 40955379
Alignment:
Q  77 tatttgataaaagaagaatgcattttacgttaagagaggca 117  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40955339 tatttgataaaagaagaatgcattttacgttaagagaggca 40955379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 9027197 - 9027139
Alignment:
Q  23 gatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||| |||| ||||  || |||||||||||||||||||||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 33689265 - 33689215
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    |||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  33689265 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatt 33689215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 34988140 - 34988205
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||| || ||||  ||||  | ||||||||||||||||||||||||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 47492096 - 47492153
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaat 213  Q
    ||||||||||||||||| |||||||||||||| || |||| |||||||||| ||||||    
T  47492096 tcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaat 47492153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 50524786 - 50524730
Alignment:
Q  161 atgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtca 217  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||| | ||||||||    
T  50524786 atgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatgtca 50524730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 39385746 - 39385813
Alignment:
Q  165 ttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtca 232  Q
    |||||||||||||||||| ||||| | |||  |||||||||| |||||||||||  ||||||||||||    
T  39385746 ttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtcacccaactctatgtca 39385813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 30580805 - 30580867
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||  |||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||    
T  30580805 tcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatgtcac 30580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 30734451 - 30734513
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||| ||||||||||||  | | || |||||||||| |||||||||||    
T  30734451 tcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcac 30734513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 2131746 - 2131802
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||| |||||  ||||| |||| |||||||||||||||||    
T  2131746 agatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 8437471 - 8437423
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  8437471 acttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 9213572 - 9213513
Alignment:
Q  22 agatacatcaacttttattgatccaaaat-tctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||| |||| | ||||| ||| |||||||||||||||||||||||||||    
T  9213572 agatacatcaacttttgttga-ctaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 34988131 - 34988067
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttgataa 86  Q
    ||||| |||||||||| |||| |||||  ||||| ||||||||||||| ||||||||| ||||||    
T  34988131 agatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtatatgataa 34988067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 38964438 - 38964390
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  38964438 acttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 46208076 - 46208029
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||| |||| | ||| ||||||||||||||||||||||||||||||    
T  46208076 acttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 47188936 - 47189003
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||||| || || ||||||| ||||||||| ||||| ||||||||| || |||||||||||    
T  47188936 aattttgaactaggtaaattaacttttgttgatccaacattcttttataaatatgatcggagggagta 47189003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 17653758 - 17653712
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||| | ||| |||||||||||||||||||||||||||||    
T  17653758 acttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 18321657 - 18321699
Alignment:
Q  121 acatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||| |||| | ||||||||||||||||||||||||||||||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatg 18321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 37508967 - 37508921
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||| | ||| |||||||||||||||||||||||||||||    
T  37508967 acttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 42299637 - 42299703
Alignment:
Q  20 ctagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttgataa 86  Q
    ||||||||||  | |||| |||||||||  |||||||||||||| || ||||||||||||| |||||    
T  42299637 ctagatacattgagttttgttgatccaactttctcttataaatacgatcggagggagtattagataa 42299703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 49414501 - 49414555
Alignment:
Q  185 caaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||| |||| |||||| ||| |||||||||||  |||||||||||||||||||    
T  49414501 caaacattgtgacattgtaattggccaatgtcacccaactctatgtcacccaagt 49414555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 5323272 - 5323337
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||| | |||||||||||||| |||| ||||| ||  ||||||||||| | |||||||||||    
T  5323272 tttttaaccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 8092644 - 8092595
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccgga 71  Q
    |||||||||||||||  ||||| |||  ||||||||||||||||||||||    
T  8092644 agatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 21024109 - 21024142
Alignment:
Q  130 ttgatgatattggtgacattggtcaatcacaatg 163  Q
    |||||||||||||||||||||||||| |||||||    
T  21024109 ttgatgatattggtgacattggtcaaacacaatg 21024142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 44785480 - 44785529
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  44785480 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45652128 - 45652067
Alignment:
Q  19 actagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||| | |||| ||||  ||||  ||||||||||||||||| ||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 51046207 - 51046162
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| ||||| |||||||||||||| ||||||||||||    
T  51046207 tgacatagagttggatgacattggtgacattggccaatcacaatgc 51046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 55249988 - 55249928
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaa--taggaccggagggagtatt 80  Q
    |||||||||||||||| |||||| |||  ||||| |||||  |||||||||||||||||||    
T  55249988 agatacatcaacttttgttgatctaaatgtctctcataaaaataggaccggagggagtatt 55249928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 4238640 - 4238592
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  4238640 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 21295410 - 21295458
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  21295410 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 22721977 - 22721929
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  22721977 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 33689252 - 33689308
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| |||||||||| |||||||||||  ||||| |||||||||||||    
T  33689252 cacaagcattgtgacattgtgattggccaatgtcacccaactcaatgtcacccaagt 33689308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34080114 - 34080162
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  34080114 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 40215022 - 40215050
Alignment:
Q  51 tctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||    
T  40215022 tctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 55223321 - 55223293
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaaca 184  Q
    |||||||||||||||||||||||||||||    
T  55223321 tcacaatgcttgtgaaagagagagaaaca 55223293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44498264 - 44498185
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44498264 atttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39571280 - 39571199
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttg 82  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  39571280 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7012224 - 7012304
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7012224 atttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagtattt 7012304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7785855 - 7785776
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7785855 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 54689 - 54611
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  54689 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2890239 - 2890161
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  2890239 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6552708 - 6552785
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6552708 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33289338 - 33289261
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  33289338 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12763731 - 12763651
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  12763731 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32211440 - 32211360
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  32211440 atttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7805776 - 7805697
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  7805776 atttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25601077 - 25600999
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  25601077 atttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43199431 - 43199353
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  43199431 atttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3304355 - 3304278
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  3304355 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32114552 - 32114472
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||    
T  32114552 atttggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagtattt 32114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31654666 - 31654743
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||    
T  31654666 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15888429 - 15888349
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||    
T  15888429 atttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaactggagggagtattt 15888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12343217 - 12343146
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  12343217 atttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 39851040 - 39850954
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||| | ||| |||||||||||    
T  39851040 aatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatattacctaagtattttcc 39850954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13578910 - 13578988
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||| |||||||    
T  13578910 atttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatatgactggatggagtat 13578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 35441018 - 35441116
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaa---------actctatgtcacccaagtattttc 245  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||         ||||||||||||||||||||||||    
T  35441018 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttc 35441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 5033250 - 5033149
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattag---------ccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |         ||||||||||  ||||||||||||||||||||||||||    
T  5033250 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 5033151  T
Q  247 ga 248  Q
    ||    
T  5033150 ga 5033149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 34541851 - 34541942
Alignment:
Q  155 atcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| || |  | |||||||||| |||||||| ||| ||||||||||||||    
T  34541851 atcacaatgcttgtgaaagagagagaaacacaagcattgtggcattttgctaggtcaatgtcactcaactctatatca-ccaagtattttccg 34541942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27422243 - 27422322
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||| ||||||||  | |||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  27422243 atttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8587223 - 8587301
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||| |||| ||||||||||||||||||||||||||||||||  |||  |||||||||||||| ||||||||| |||||    
T  8587223 attttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 6296694 - 6296611
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||| |||||||||||||||||||||||| || | || |||||||||| | |||||||||  |||||||||||| ||||||    
T  6296694 tcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgattggtcaatgtcacccaactctatgtcatccaagt 6296611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 33841640 - 33841739
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattag---------ccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |         ||||||||||  ||||||||||||||||||||||||||    
T  33841640 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 33841739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 8243438 - 8243536
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgat---------tagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||         |  ||||||||||  ||||||||||||||||||||||||||    
T  8243438 cacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctatgtcacccaagtattttcc 8243536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 4958688 - 4958627
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtca 217  Q
    ||||||| ||||||||||||||||||||||||||| | || |||||||||| ||||||||||    
T  4958688 tcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatgtca 4958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 10086846 - 10086781
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaa 221  Q
    |||||||| |||||||||||||||||||||||||| | || ||||||||||  |||||||||||||    
T  10086846 tcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatgtcactaa 10086781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 5667231 - 5667124
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg--------cttgtgaaagagagagaaacacaaacactgtggcattgtgattagcc 210  Q
    ||||||| |||||||||| |||||||||||||| |||| ||||||        ||||||||||||||||||| |||| || |||| ||||||||||  ||    
T  5667231 tgacatagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgacc 5667132  T
Q  211 aatgtcac 218  Q
    ||||||||    
T  5667131 aatgtcac 5667124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 34229731 - 34229680
Alignment:
Q  155 atcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||||||||||||||||||||||||||||| || | || ||||||||||    
T  34229731 atcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgatt 34229680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  24 atacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||| |||| | ||  |||||||||||||||||||||||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 8796511 - 8796461
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||||||||||||||| |||||||||||| || |||| ||||||||||    
T  8796511 tcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgatt 8796461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 22649872 - 22649834
Alignment:
Q  209 ccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22649872 ccaatgtcactcaactctatgtcacccaagtattttccg 22649834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 45191131 - 45191238
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc--------ttgtgaaagagagagaaacacaaacactgtggcattgtgattagcc 210  Q
    ||||||| |||| ||||||||||||||||||| | |||||||||||        || ||||||||||||||||||||||| |||  |||| ||||| | |    
T  45191131 tgacatagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggtc 45191230  T
Q  211 aatgtcac 218  Q
    ||||||||    
T  45191231 aatgtcac 45191238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 28463665 - 28463616
Alignment:
Q  24 atacatcaacttttattgatccaaaattctcttataaataggaccggagg 73  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 33057649 - 33057592
Alignment:
Q  23 gatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| ||| |||| |||||||||  || ||||||||||||||||||||||||||||    
T  33057649 gatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 5667101 - 5667145
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||    
T  5667101 tgacatagagttggatgacattggtgacattggtcaatcacaatg 5667145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 8243450 - 8243394
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||||||||||||||   |||||||||| |||||||||||||||||||    
T  8243450 cacaagcattgtggcattgtgattgatcaatgtcactcaactctatgtcacccaagt 8243394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 17006967 - 17007026
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaata 63  Q
    ||||||||||| ||||  |||||||||||||||||||||   ||| ||||||||||||||    
T  17006967 tggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17570280 - 17570221
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaata 63  Q
    ||||||||||| ||||  |||||||||||||||||||||   ||| ||||||||||||||    
T  17570280 tggactgaattgttaatcagatacatcaacttttattgactaaaatttctcttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 2581895 - 2581853
Alignment:
Q  175 gagagaaacacaaacactgtggcattgtgattagccaatgtca 217  Q
    ||||||||||||| || ||||||||||||||| ||||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtca 2581853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 7012217 - 7012171
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  7012217 acttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28463664 - 28463742
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| ||| ||||| |||||||||   ||| |||| |||||   |||||||||| ||||||||||||    
T  28463664 atttggactgaattttgaaccagatatatcaactttcggtgacccaatattctgcaataaataggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31654659 - 31654613
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||| | ||| |||||||||||||||||||||||||||||    
T  31654659 acttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 33057655 - 33057725
Alignment:
Q  9 tgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||| ||||||| ||||||||||| |||| |||| | ||  |||||||||||||| ||||||| |||||||    
T  33057655 tgaaattttaaccagatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 39571287 - 39571333
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  39571287 acttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 4245665 - 4245714
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 5667208 - 5667245
Alignment:
Q  209 ccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||  |||||||||||||||||||||||||||    
T  5667208 ccaatgtcatcaaactctatgtcacccaagtattttcc 5667245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 17006967 - 17006914
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    |||| ||||||||||| |||| ||||  ||||||||||||||||| ||||||||    
T  17006967 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 17570280 - 17570333
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    |||| ||||||||||| |||| ||||  ||||||||||||||||| ||||||||    
T  17570280 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 24692043 - 24691986
Alignment:
Q  14 ttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccgga 71  Q
    ||||||| ||||| |||||||||| |||| ||||| |||| ||| |||||||||||||    
T  24692043 ttttaaccagatatatcaacttttgttgacccaaatttcttttaaaaataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 24692052 - 24692113
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttga 83  Q
    |||||||||||||||| |||| | ||  || |||||||||||||| || |||||||||||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttga 24692113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 33289352 - 33289393
Alignment:
Q  39 ttgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| ||| |||||||||||||||||||||||| ||||||    
T  33289352 ttgatctaaatttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 54696 - 54744
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  54696 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 2890246 - 2890294
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  2890246 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7785862 - 7785910
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  7785862 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7805783 - 7805831
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  7805783 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 15688086 - 15688038
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccgg 70  Q
    |||||||||||||||| |||| ||||  |||||||||||| ||||||||    
T  15688086 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 22649908 - 22649872
Alignment:
Q  182 acacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||| || |||||||||||||||||||||||||||    
T  22649908 acacaagcattgtggcattgtgattagccaatgtcac 22649872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  25 tacatcaacttttattgatccaaaattctcttataaataggaccggagggagt 77  Q
    ||||| ||||||| ||||  |||||||||||| ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 31159940 - 31159912
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaaca 184  Q
    |||||||||||||||||||||||||||||    
T  31159940 tcacaatgcttgtgaaagagagagaaaca 31159912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 41915620 - 41915592
Alignment:
Q  51 tctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||    
T  41915620 tctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 43332592 - 43332556
Alignment:
Q  45 caaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  43332592 caaaattttcttataaataggaccggatggagtattt 43332556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28536828 - 28536750
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536828 atttggaatgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1738524 - 1738445
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  1738524 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7240802 - 7240881
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7240802 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 29053366 - 29053453
Alignment:
Q  159 caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  29053366 caatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttcc 29053453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9268809 - 9268887
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  9268809 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46840913 - 46840990
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  46840913 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7482278 - 7482357
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7482278 atttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38063990 - 38063911
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  38063990 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4790301 - 4790379
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  4790301 atttggactaaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22285752 - 22285829
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  22285752 atttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23314216 - 23314139
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  23314216 atttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31319476 - 31319399
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  31319476 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36583448 - 36583527
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  36583448 atttggacttaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1565806 - 1565728
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  1565806 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 94395 - 94318
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  94395 atttggacagaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38441513 - 38441590
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  38441513 atttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33418429 - 33418500
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggag 72  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  33418429 atttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36016273 - 36016196
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||    
T  36016273 atttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 7671961 - 7672022
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  7671961 cacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcac 7672022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 42628381 - 42628297
Alignment:
Q  159 caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattt 243  Q
    |||||||||||||||||||||||||| || || ||||||||||||||| | |||||||||  ||||||||||||||||| |||||    
T  42628381 caatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcacccaactctatgtcacccaaatattt 42628297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 11016958 - 11016859
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  11016958 tcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 11016859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 34854745 - 34854844
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttccg 247  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||| |         |||||||||||||||||||||||||||    
T  34854745 cacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacccaactctatgtcacccaagtattttccg 34854844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 15027631 - 15027569
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||    
T  15027631 tcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcac 15027569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9575462 - 9575539
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||| ||||||||||||||||||||||||||| |||| |||| | ||  |||||||||||||||||||| ||||||||    
T  9575462 atttagactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 38975893 - 38975794
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgat---------tagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||         |  ||||||||||  |||||||||||||||||||||||||||    
T  38975893 cacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctatgtcacccaagtattttccg 38975794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 22764753 - 22764811
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcac 22764811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 27028842 - 27028904
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||  ||||||||||    
T  27028842 tcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcac 27028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40840196 - 40840126
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccgga 71  Q
    ||||||||||||||||||||||  ||||||||||||| ||||   ||| ||||||||||||||||||||||    
T  40840196 atttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 41018280 - 41018377
Alignment:
Q  159 caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattag---------ccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    |||||||||||||||||||||||||| || || ||||||||||||||| |         ||||||||||  |||||||||||||||||||||||||||    
T  41018280 caatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtattttccg 41018377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 4649411 - 4649328
Alignment:
Q  156 tcacaatgcttgtgaaagagagaga--aacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaa 237  Q
    |||| ||||||||||||||||||||  ||||||| || ||| |||||||||||  ||||||||||  |||||||||||||||||    
T  4649411 tcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtcacccaactctatgtcacccaa 4649328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 34854757 - 34854701
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  34854757 cacaagcattgtggcattgtgattggccaatgtcaccaaactctatgtcacccaagt 34854701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 48000825 - 48000769
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaat 213  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  48000825 cacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattggccaat 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 7269476 - 7269412
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccgga 71  Q
    |||||||||||||| |||| ||||||||||| || | ||||  ||||||||||||||||||||||    
T  7269476 actgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 7661147 - 7661207
Alignment:
Q  19 actagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| |||| |||||  |||| ||||||||||||| ||||||||||    
T  7661147 actagatacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 4290634 - 4290584
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||| |||||||||||||||||||||| | || |||||||||||||||    
T  4290634 tcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgatt 4290584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 29053364 - 29053322
Alignment:
Q  195 ggcattgtgattagccaatgtcactaaactctatgtcacccaa 237  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  29053364 ggcattgtgattggccaatgtcaccaaactctatgtcacccaa 29053322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 22285745 - 22285697
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||||||||||    
T  22285745 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 30217504 - 30217564
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtca 217  Q
    |||||||||||||||||||||||||||| ||||| | ||  ||||||||| || |||||||    
T  30217504 cacaatgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtca 30217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 45231880 - 45231961
Alignment:
Q  141 ggtgacattggtcaatcacaatgc----ttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||  ||||||||||||    |||||||||||||||||||| || || |||  |||||||||| |||||||||||    
T  45231880 ggtgacattgaccaatcacaatgccactttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcac 45231961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 2853736 - 2853681
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaataggacc 68  Q
    |||||||||||||||||  |||||| |||||||||| |||||||| ||||| ||||    
T  2853736 tttttaactagatacatatacttttgttgatccaaatttctcttacaaataagacc 2853681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 10419543 - 10419590
Alignment:
Q  192 tgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||| ||||||||| |||||||||||| ||||||||||| ||||||||    
T  10419543 tgtgacattgtgatcagccaatgtcaccaaactctatgttacccaagt 10419590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 28677341 - 28677306
Alignment:
Q  53 tcttataaataggaccggagggagtatttgataaaa 88  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28677341 tcttataaataggaccggagggagtattttataaaa 28677306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7661129 - 7661075
Alignment:
Q  25 tacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||   ||| ||||||||||||||||| || |||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 36016280 - 36016326
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||| | ||| |||||||||||||||||||||||||||||    
T  36016280 acttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 45231906 - 45231860
Alignment:
Q  193 gtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||||||| | |||||||||  |||||||||||||||||||    
T  45231906 gtggcattgtgattggtcaatgtcacccaactctatgtcacccaagt 45231860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 46840906 - 46840856
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatttg 82  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||||    
T  46840906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 1565813 - 1565862
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  1565813 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 4290549 - 4290594
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| | |||||||||||| ||||||||||||||||||    
T  4290549 tgacatagagttgggtgatattggtgatattggtcaatcacaatgc 4290594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 5347750 - 5347721
Alignment:
Q  50 ttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||    
T  5347750 ttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 7269478 - 7269535
Alignment:
Q  21 tagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||| |||| |||| ||||  || ||||||||||| ||||||||||||||    
T  7269478 tagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 34854829 - 34854784
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| | ||| |||||||||||||||||||||||||||    
T  34854829 tgacatagagttgggtgacattggtgacattggtcaatcacaatgc 34854784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 39019893 - 39019840
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaatagga 66  Q
    |||| ||||||||||||||| |||| ||||||||||   |||||||||||||||    
T  39019893 ttttgaactagatacatcaatttttgttgatccaaatgcctcttataaatagga 39019840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1738531 - 1738579
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  1738531 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 7240795 - 7240747
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  7240795 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 53337423 - 53337501
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53337423 atttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6121970 - 6121893
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6121970 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47833664 - 47833741
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  47833664 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3422113 - 3422192
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3422113 atttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33621849 - 33621928
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  33621849 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47838694 - 47838615
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  47838694 atttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48336316 - 48336395
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  48336316 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3993029 - 3993107
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  3993029 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 42375099 - 42375009
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||  ||||||||||||||||||||||||||    
T  42375099 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcacccaactctatgtcacccaagtattttcc 42375009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3372174 - 3372251
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  3372174 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20538763 - 20538686
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  20538763 atttggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42797785 - 42797862
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  42797785 atttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46797778 - 46797855
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  46797778 atttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 47404634 - 47404727
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccgac 249  Q
    |||||||||||||||||||||||||||| ||| || |||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||    
T  47404634 tcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcacccaactctatgtcacccaagtattttccgac 47404727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 30861805 - 30861885
Alignment:
Q  138 attggtgacattggtcaatcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  30861805 attggtgacattggccaatcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 30861885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 51894658 - 51894582
Alignment:
Q  2 tttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  51894658 tttggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5986929 - 5987008
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  5986929 atttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41469843 - 41469764
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  41469843 atttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3904760 - 3904682
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  3904760 atttggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24704423 - 24704501
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  24704423 atttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 52756728 - 52756806
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||    
T  52756728 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43900602 - 43900679
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| ||||    
T  43900602 atttggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 40789268 - 40789192
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtca 232  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  40789268 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcaccaaactctatgtca 40789192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40913266 - 40913190
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagt 77  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40913266 atttggactgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7579363 - 7579450
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttgataaaa 88  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||| | |||||||    
T  7579363 atttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagtagtagataaaa 7579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 31430510 - 31430597
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  31430510 tcacaatgcttatgaaagagagagaaacacaaac---gtggcattgtaattggccaatgtcacccaactctatgtcacccaagtattttcc 31430597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 52028638 - 52028555
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||| ||||  |||||||||||||||||||    
T  52028638 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcacccaactctatgtcacccaagt 52028555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 55090045 - 55090128
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||||| |||||| || |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  55090045 tcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcactcaactctatgtcacccaagt 55090128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41615753 - 41615676
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||| ||||||    
T  41615753 atttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 6271791 - 6271691
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  6271791 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagtattttcc 6271692  T
Q  247 g 247  Q
    |    
T  6271691 g 6271691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 23444318 - 23444380
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  23444318 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 23444380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 47661931 - 47661869
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  47661931 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 47661869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 51265534 - 51265472
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  51265534 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 51265472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 53954699 - 53954609
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||| ||||||||| | || |||| |||||||||| |||||||||||  |||| ||| |||||||||||||||||    
T  53954699 tcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatgtcacccaactttatatcacccaagtattttcc 53954609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 17344272 - 17344346
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||   ||||||||||||||| |||||||||| |||||||||||||| ||  |||||||||||||    
T  17344272 actgaatttttaatcggatacatcaacttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagg 73  Q
    ||||||||||||||  |||||||||||||||||||| ||| | ||||||||||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 47762734 - 47762635
Alignment:
Q  127 agtttgatgatattggtgacattggtcaa--------tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||| ||||| |||  |||||||||| | |||||||||    
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 4780358 - 4780425
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||  |||||||| ||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  4780358 aatttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33551254 - 33551312
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttata 59  Q
    |||| |||||||||||||||||||||||||||||||| |  | ||||||||||||||||    
T  33551254 attttgactgaatttttaactagatacatcaacttttgtaaacccaaaattctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 38714912 - 38714824
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtatttt 244  Q
    |||||||| |||||||||| | ||||||| ||| | | || |||||||||| |||||| ||||  ||||||||||||||||| ||||||    
T  38714912 tcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtgattggccaatatcacctaactctatgtcacccaaatatttt 38714824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  24 atacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||| |||| ||||| || |||||||||||||||||||| ||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 40913273 - 40913320
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  40913273 acttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 45591459 - 45591498
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtg 195  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  45591459 tcacaatgcttgtgaaagagagagaaacacaaacattgtg 45591498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26231630 - 26231688
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttata 59  Q
    |||||||||||||||||||||||||| |||||||||| |  | | ||||||||||||||    
T  26231630 atttggactgaatttttaactagatatatcaacttttgtaaaccgaaaattctcttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 35682255 - 35682193
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||| ||||||||||||  | | || |||||||||| |||||||||||    
T  35682255 tcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcac 35682193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 24006120 - 24006194
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||||||||||||||||||||| |||        |||||||||| | |||||||||  |||||||||||||||||||    
T  24006120 cacaatgcttgtgaaagagagagaaacataaa--------cattgtgattggtcaatgtcacccaactctatgtcacccaagt 24006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 30861908 - 30861863
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||    
T  30861908 tgacatagagttggatgatattggtgacattggccaatcacaatgc 30861863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 43900595 - 43900546
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| ||||||||||||||||||||||||||||||||    
T  43900595 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 40789255 - 40789311
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  40789255 cacaagcattgtgacattgtgattggccaatatcaccaaactctatgtcacccaagt 40789311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 50384167 - 50384111
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| |||||||||| |||||||||||  |||||||||||||||||||    
T  50384167 cacaagcattgtgacattgtgattggccaatgtcacccaactctatgtcacccaagt 50384111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50430495 - 50430431
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaatagg 65  Q
    ||||||| |||||||||||| ||||||||||| |||| |||| |||||  | |||||||||||||    
T  50430495 atttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaatagg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 55090058 - 55090002
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  55090058 cacaagcattgtgacattgtgattgaccaatgtcactcaactctatgtcacccaagt 55090002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 28693971 - 28694006
Alignment:
Q  155 atcacaatgcttgtgaaagagagagaaacacaaaca 190  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28693971 atcacaatgtttgtgaaagagagagaaacacaaaca 28694006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 187
Target Start/End: Original strand, 50384154 - 50384185
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  50384154 tcacaatgcttgtgaaagagagagaaacacaa 50384185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6121977 - 6122023
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  6121977 acttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 26186065 - 26186124
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtca 217  Q
    ||||||||||||||||||||  |||||||||| || ||||  ||||||||| ||||||||||    
T  26186065 tcacaatgcttgtgaaagag--agaaacacaagcattgtgaaattgtgattggccaatgtca 26186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 1716357 - 1716301
Alignment:
Q  22 agatacatcaacttttattgatccaaaat-tctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||| ||||| | ||||||||||||| ||||||||||||||    
T  1716357 agatacatcaacttttgttga-ccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 6271706 - 6271751
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||||    
T  6271706 tgacatagagttgggtgatattggtgacattggccaatcacaatgc 6271751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 17344269 - 17344212
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| |||||  ||  ||||||||||||||| ||||||| ||||||    
T  17344269 agatacatcaacttttgttgatttaactttctcttataaatagaaccggagcgagtat 17344212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 44900136 - 44900080
Alignment:
Q  22 agatacatcaacttttattgatccaaaat-tctcttataaataggaccggagggagta 78  Q
    ||||| |||||||||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  44900136 agatatatcaacttttgttga-ccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 3372167 - 3372119
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  3372167 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 3993022 - 3992974
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  3993022 acttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 4758899 - 4758935
Alignment:
Q  51 tctcttataaataggaccggagggagtatttgataaa 87  Q
    |||||| |||||||||||||||| |||||||||||||    
T  4758899 tctcttgtaaataggaccggaggtagtatttgataaa 4758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 24006132 - 24006076
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| |||||||||| |||||||||||  |||| ||||||||||||||    
T  24006132 cacaagcattgtgtcattgtgattggccaatgtcacccaactgtatgtcacccaagt 24006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 35682170 - 35682214
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| |||| | |||||||||||||||||| |||||||||||    
T  35682170 tgacatagagttaggtgatattggtgacattggccaatcacaatg 35682214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 47404647 - 47404591
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| ||||||||||  ||||||||||  |||||||||||||||||||    
T  47404647 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgtcacccaagt 47404591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47833657 - 47833609
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  47833657 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 48336309 - 48336261
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  48336309 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 55292144 - 55292104
Alignment:
Q  45 caaaattctcttataaataggaccggagggagtatttgata 85  Q
    |||| ||||||| |||||||||||||||| |||||||||||    
T  55292144 caaatttctcttgtaaataggaccggaggaagtatttgata 55292104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3055611 - 3055693
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttga 83  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  3055611 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttga 3055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13344537 - 13344615
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13344537 atttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 6217274 - 6217363
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  6217274 cacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttcc 6217363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37990090 - 37990005
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttgataa 86  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  37990090 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattttataa 37990005  T

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Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6648596 - 6648517
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  6648596 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9047832 - 9047753
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9047832 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41478716 - 41478637
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  41478716 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38917599 - 38917521
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  38917599 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44398739 - 44398817
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  44398739 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12338014 - 12337937
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12338014 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13197787 - 13197710
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  13197787 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15896895 - 15896972
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  15896895 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16243860 - 16243781
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  16243860 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44397600 - 44397678
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  44397600 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15372279 - 15372356
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  15372279 atttggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 29925623 - 29925708
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttc 245  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||| ||||||||||||||    
T  29925623 aatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgttacccaagtattttc 29925708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 38933676 - 38933584
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccga 248  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||||  |||||||||||||| |||||||||||||    
T  38933676 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacccaactctatgtcacctaagtattttccga 38933584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37666687 - 37666608
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  37666687 atttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41492973 - 41492894
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||    
T  41492973 atttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16044394 - 16044317
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  16044394 atttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30099259 - 30099181
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||| ||||||||||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  30099259 atttggattgaatttttaattagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 37961794 - 37961705
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||  | |||||||||  ||||||||| ||||||||||||||||    
T  37961794 cacaatgcttgtgaaagagagagaaacacaaacattatggcattgtgatcggtcaatgtcacccaactctatgccacccaagtattttcc 37961705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44804655 - 44804581
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    ||||||||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||||||||||||    
T  44804655 atttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 15011369 - 15011284
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||      | |||||||||||||||||||||    
T  15011369 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcac------caatgtcacccaagtattttccg 15011284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 2894052 - 2893969
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||||||| |||| || ||||  ||||||||| |||||||||||  |||||||||||||||||||    
T  2894052 tcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcacccaactctatgtcacccaagt 2893969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 14229402 - 14229484
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||| ||||||||||   |||||||||||||||||||    
T  14229402 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatt-gccaatgtcatccaactctatgtcacccaagt 14229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 29508741 - 29508839
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||||||||||||||| || || |||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  29508741 cacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatatcacccaactctatgtcacccaagtattttcc 29508839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 2828673 - 2828596
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcac 233  Q
    ||||||||||| |||||||||||||||||||| || | || |||||||||| |||||||||||  |||||||||||||    
T  2828673 tcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacccaactctatgtcac 2828596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 16514513 - 16514413
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || | |||||| |||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  16514513 tcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 16514414  T
Q  247 g 247  Q
    |    
T  16514413 g 16514413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12170476 - 12170397
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||  |||||||||||||| || |||| | ||||||    
T  12170476 atttggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtatt 12170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 14470644 - 14470700
Alignment:
Q  159 caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgt 215  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  14470644 caatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggctaatgt 14470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 15011356 - 15011415
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtatt 242  Q
    ||||| || |||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  15011356 cacaagcattgtgacattgtgattggccaatgtcactcaactctatgtcacccaagtatt 15011415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 30852689 - 30852748
Alignment:
Q  20 ctagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||| |||||||||| ||| ||  ||||||||||||||||||||||||||||||    
T  30852689 ctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4684009 - 4683951
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttata 59  Q
    ||||||||||||||||||||||||||||||||||||| |  | | ||||||||||||||    
T  4684009 atttggactgaatttttaactagatacatcaacttttgtaaaccgaaaattctcttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 16734839 - 16734910
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    ||||||||||||||||| | |||||||||||||| || |  |||  |||||||||||||||||| |||||||    
T  16734839 tggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaataggactggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 6722040 - 6721978
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||| ||||||||||||||||||||||| || ||||  ||||||||| | |||||||||    
T  6722040 tcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatgtcac 6721978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 37633018 - 37632981
Alignment:
Q  209 ccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37633018 ccaatgtcaccaaactctatgtcacccaagtattttcc 37632981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 13775832 - 13775862
Alignment:
Q  50 ttctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||    
T  13775832 ttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 14892394 - 14892300
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg--------cttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||||||        ||| ||||||||||||||| ||||||| |||| ||||||||||    
T  14892394 tgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaaaca-tgtgacattgtgatt 14892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 239
Target Start/End: Original strand, 32545899 - 32545929
Alignment:
Q  209 ccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||||||||||||||||||||||||    
T  32545899 ccaatgtcactaaactctatgtcacccaagt 32545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13724167 - 13724102
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||| | |||||||||||||| |||| | | |  |||||| |||||||||||||||||||||    
T  13724167 tttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 29508825 - 29508780
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||||    
T  29508825 tgacatagagttgggtgatattggtgacattggccaatcacaatgc 29508780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 41478723 - 41478772
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  41478723 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 42263497 - 42263468
Alignment:
Q  50 ttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||    
T  42263497 ttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 9173032 - 9172984
Alignment:
Q  194 tggcattgtgattagccaatgtcactaaactctatgtcacccaagtatt 242  Q
    ||||||| |||| | ||||||||||  ||||||||||||||||||||||    
T  9173032 tggcattctgatgaaccaatgtcacccaactctatgtcacccaagtatt 9172984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 14229357 - 14229401
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| |||| | ||| ||||||||||||||||||||||||||    
T  14229357 tgacatagagttcggtgacattggtgacattggtcaatcacaatg 14229401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 15244034 - 15243990
Alignment:
Q  19 actagatacatcaacttttattgatccaaaattctcttataaata 63  Q
    ||||||||||||||||||| ||||| ||||  |||||||||||||    
T  15244034 actagatacatcaacttttgttgattcaaatatctcttataaata 15243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 15271113 - 15271053
Alignment:
Q  19 actagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||| || ||||| ||||||    
T  15271113 actagatacatcaacttttgttgcttcaaatgtctcttataaataagatcggagagagtat 15271053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 15372272 - 15372224
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||| ||||||||||||    
T  15372272 acttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 37990097 - 37990145
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  37990097 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41453112 - 41453148
Alignment:
Q  1 atttggactgaatttttaactagatacatcaactttt 37  Q
    |||||||||||||||||||| | ||||||||||||||    
T  41453112 atttggactgaatttttaacaaaatacatcaactttt 41453148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 44425028 - 44425084
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggac 67  Q
    |||||| |||||||||||| ||||||| ||||| ||||  |||||||| ||||||||    
T  44425028 aattttgaactagatacataaacttttgttgattcaaatatctcttattaataggac 44425084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33052871 - 33052790
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  33052871 atttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtatttg 33052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9644749 - 9644829
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  9644749 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9650766 - 9650846
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  9650766 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26602376 - 26602455
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26602376 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6330168 - 6330246
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6330168 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11572222 - 11572144
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  11572222 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13853670 - 13853592
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  13853670 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2830388 - 2830465
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2830388 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8383046 - 8382969
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8383046 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8099583 - 8099663
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  8099583 atttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6068619 - 6068697
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  6068619 atttggattgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 12343189 - 12343099
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||  ||||||||||||||||||||||||||    
T  12343189 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaatgtcacccaactctatgtcacccaagtattttcc 12343099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35031078 - 35031000
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| |||||    
T  35031078 atttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8417870 - 8417793
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  8417870 atttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22896515 - 22896593
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||| ||||||||    
T  22896515 atttggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28747211 - 28747133
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||||    
T  28747211 atttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6143607 - 6143684
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||| ||||||    
T  6143607 atttggattgaatttttaactagatacatcaacttttgttgtcccaaaattctcttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17992041 - 17992118
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||| |||||||||||||||||||||| | |||| |||| |||||||||||||||||||||||||| ||||||||    
T  17992041 atttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 10521898 - 10521989
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||||| |||||||||||||||||||| || | || ||||||||||  ||||||||||| ||||||||||||||  |||||||||||    
T  10521898 tcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcactcaactctatgtcaccatagtattttccg 10521989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 31654385 - 31654311
Alignment:
Q  165 ttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||||||||||||||||||| || |||| |||||||||| |||||||||||  |||||||| ||||||||||    
T  31654385 ttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacccaactctatatcacccaagt 31654311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 551215 - 551276
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  551215 cacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 551276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3788093 - 3788168
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||| ||||||| |||||||||||||| |||| | ||| || ||||||||||| |||||||||||||||    
T  3788093 tggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 7597048 - 7596977
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||||||||||||||||||  |||| ||||| |||||||||||  ||||||||||    
T  7597048 actgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaataggattggagggagta 7596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 24618654 - 24618733
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||| |||||||||||||||||||| || |||| |||||||||| | ||| |||||  |||||||||||||||||||    
T  24618654 aatgcttatgaaagagagagaaacacaagcattgtgacattgtgattggtcaacgtcacccaactctatgtcacccaagt 24618733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 8186441 - 8186497
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 17750991 - 17750929
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||  ||||||||||    
T  17750991 tcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatgtcac 17750929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 24587550 - 24587485
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaa 221  Q
    ||||||||||||||||| || ||||||||||| || |||| ||||||||||  |||||||||||||    
T  24587550 tcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaa 24587485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 2315353 - 2315436
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||| ||||||||||||| |||||| || || | ||| ||||||||||  |||||||||  ||||||||||||| |||||    
T  2315353 tcacaatgtttgtgaaagagagcgaaacataagcattatggtattgtgattattcaatgtcacctaactctatgtcacacaagt 2315436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 10521902 - 10521855
Alignment:
Q  192 tgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  10521902 tgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagt 10521855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 13043547 - 13043502
Alignment:
Q  155 atcacaatgcttgtgaaagagagagaaacacaaacactgtggcatt 200  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||    
T  13043547 atcacaatgcttgtgaaagagagagaaacacaagcattgtgacatt 13043502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 551227 - 551171
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||| |||||||||||||||  ||||||||||  ||||||||| |||||||||    
T  551227 cacaaacattgtggcattgtgattgaccaatgtcacccaactctatgccacccaagt 551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttata 59  Q
    |||||| |||||||||||||||||||||||||  |||| ||||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 8186423 - 8186364
Alignment:
Q  24 atacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttga 83  Q
    ||||||||||||||||||| |||||  |||||| || |||||| |||||| |||||||||    
T  8186423 atacatcaacttttattgacccaaatgtctcttgtatataggagcggaggaagtatttga 8186364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 551299 - 551254
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| | || |||||||||||||||||||| ||||||||||||    
T  551299 tgacatagaattggatgatattggtgacattggccaatcacaatgc 551254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 17750917 - 17750950
Alignment:
Q  130 ttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| ||||||||||||||||||||||||||    
T  17750917 ttgatgacattggtgacattggtcaatcacaatg 17750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 24975756 - 24975801
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||| | ||| |||||||||||||||||||||||||||    
T  24975756 tgacatagagttggctgacattggtgacattggtcaatcacaatgc 24975801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6068612 - 6068564
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| | ||| || ||||||||||||||||||||| ||||||    
T  6068612 acttttattgacctaaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 8383053 - 8383101
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  8383053 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 13043819 - 13043847
Alignment:
Q  9 tgaatttttaactagatacatcaactttt 37  Q
    |||||||||||||||||||||||||||||    
T  13043819 tgaatttttaactagatacatcaactttt 13043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14936533 - 14936589
Alignment:
Q  24 atacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| || |||| |||||  |||||||||||||||||| |||||| ||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggaccagagggattatt 14936589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 22896499 - 22896471
Alignment:
Q  50 ttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||    
T  22896499 ttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 33052878 - 33052926
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  33052878 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26471142 - 26471065
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26471142 atttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14984890 - 14984969
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14984890 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11795986 - 11796063
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  11795986 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27159435 - 27159358
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  27159435 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31842872 - 31842795
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  31842872 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39402043 - 39401966
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  39402043 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44668170 - 44668093
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  44668170 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1050941 - 1051021
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  1050941 atttggactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34042749 - 34042829
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  34042749 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 8337900 - 8337991
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||||  |||||||||||||||||||||||||||    
T  8337900 tcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtcacccaactctatgtcacccaagtattttccg 8337991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9981700 - 9981779
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  9981700 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25694372 - 25694450
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  25694372 atttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47216776 - 47216698
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  47216776 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47777558 - 47777481
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  47777558 atttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 47969748 - 47969827
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  47969748 atttagactgaatttttaactagatacatcaacttttgttgatccaaaattattttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17556806 - 17556884
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||    
T  17556806 atttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 29371457 - 29371376
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaa 237  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||||||||    
T  29371457 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcacctaactctatgtcacccaa 29371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12483705 - 12483626
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||| ||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  12483705 atttagactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 34062298 - 34062207
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    |||||||| |||||||||||||||||||| || || ||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||    
T  34062298 tcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcacccaactctatgtcacccaaatattttccg 34062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44955283 - 44955212
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  44955283 atttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 49444964 - 49445051
Alignment:
Q  158 acaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttccg 247  Q
    |||||||||||||  ||||||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  49444964 acaatgcttgtga--gagagagaaacacaagcattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttccg 49445051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 11897113 - 11897188
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttg 82  Q
    ||||||||||||||  ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  11897113 actgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47588414 - 47588335
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||  |||| ||||||||||    
T  47588414 atttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 46333995 - 46334084
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttc 245  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||||||| | ||||||||   |||||||||||||||||||||||||    
T  46333995 tcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtcatccaactctatgtcacccaagtattttc 46334084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 29179646 - 29179746
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  29179646 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 29179745  T
Q  247 g 247  Q
    |    
T  29179746 g 29179746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11989834 - 11989911
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||| | ||||||||| |||||||||  |||| |||| ||||||||||||||||||||||||    
T  11989834 atttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23278078 - 23278021
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttat 58  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  23278078 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 36290441 - 36290506
Alignment:
Q  141 ggtgacattggtcaatcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  36290441 ggtgacattggccaatcacaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgatt 36290506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 48993966 - 48994065
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattag---------ccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |         ||||||||||  ||||||||||||||||||||||||||    
T  48993966 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 48994065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 5995457 - 5995399
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgt 215  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  5995457 cacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 5995399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 44706834 - 44706895
Alignment:
Q  157 cacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||||||||||| || || |||||||||||| |||||||||||    
T  44706834 cacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcac 44706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 37155135 - 37155035
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatg---------tcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||| |||||||||||||||||||||||| || |||| |||||||||| |||||||         |||| |||||||||||||||||||||||||||    
T  37155135 tcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaactctatgtcacccaagtattttcc 37155036  T
Q  247 g 247  Q
    |    
T  37155035 g 37155035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 15220900 - 15220817
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||||||||||||||||||||||||| || ||||  || ||||||  ||||||||||  ||||| |||||||||||||    
T  15220900 tcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtgattgaccaatgtcacccaactccatgtcacccaagt 15220817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 37552197 - 37552272
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| ||||||||  | |||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  37552197 tggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 1091593 - 1091643
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  1091593 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatt 1091643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 4609085 - 4609023
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||  | |||||||||    
T  4609085 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcac 4609023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 16448182 - 16448239
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 17127613 - 17127678
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaa 221  Q
    |||||||||||||||||||||||||||||||| || |||| |||| ||||| | ||||||||||||    
T  17127613 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatgtcactaa 17127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 28928841 - 28928785
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  28928841 cacaagcactgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagt 28928785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 47303484 - 47303401
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||| |||||||||||||||||||||||||| | || |||||||||| | |||| ||||  |||||||| |||| |||||    
T  47303484 tcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattggtcaatatcacctaactctatatcactcaagt 47303401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 48498499 - 48498404
Alignment:
Q  161 atgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttccg 247  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||  |||||||||| |         |||||||||||||||||||||||||||    
T  48498499 atgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcacccaactctatgtcacccaagtattttccg 48498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 741551 - 741613
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||   ||||||||||    
T  741551 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcac 741613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 32540797 - 32540859
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || |||  |||||||||| | |||||||||    
T  32540797 tcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatgtcac 32540859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 38674554 - 38674633
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaa 237  Q
    ||||||||||||||||||||  |||||||||| || |||| |||| ||||| |||||| ||||  |||||||||||||||||    
T  38674554 tcacaatgcttgtgaaagag--agaaacacaagcattgtgacattatgattggccaatatcacccaactctatgtcacccaa 38674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 11897110 - 11897053
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 5694914 - 5695000
Alignment:
Q  139 ttggtgacattggtcaatcacaat-------gcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||| | |||| |||||| |||  ||||||||||    
T  5694914 ttggtgacattggtcaatcacaatattaaatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcac 5695000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 9157400 - 9157340
Alignment:
Q  155 atcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgt 215  Q
    ||||||||||||| ||||||||||||||||||| || |||| |||||||||| | ||||||    
T  9157400 atcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgt 9157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12047159 - 12047223
Alignment:
Q  1 atttggactgaattttt-aactagatacatcaacttttattgatccaaaattctcttataaatag 64  Q
    |||| |||||||||||| |||| ||||||||||  |||||||||||||| |||||||||||||||    
T  12047159 atttagactgaattttttaactggatacatcaatctttattgatccaaatttctcttataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 28928828 - 28928867
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtg 195  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  28928828 tcacagtgcttgtgaaagagagagaaacacaaacactgtg 28928867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 16448182 - 16448108
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||| ||||||| |||| |||| |||| | |||||||| |||||||| |||||    
T  16448182 tggactgaattttgaaccagatacataaacttttgttgacccaatattcccctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1598457 - 1598379
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||| | ||||||||| |||| |||| ||| | ||||||||||||||||| |||| || ||||||    
T  1598457 atttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcggatggggtattt 1598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 25694365 - 25694317
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||| | |||||||||||    
T  25694365 acttttattgatctaaatttctcttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 187
Target Start/End: Original strand, 1819538 - 1819569
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  1819538 tcacaatgcttgtgaaagagagagaaacacaa 1819569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 5392211 - 5392278
Alignment:
Q  13 tttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||| | ||||||||||||||||||| | ||| |||||||||| || |||||| || |||||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 31745204 - 31745271
Alignment:
Q  15 tttaactagatacatcaacttttattgatccaaaattc-tcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||  |||  || | ||||||| ||||||||| |||||||||    
T  31745204 tttaactagatacatcaacttttattgatttaaatgtctttttataaaaaggaccggatggagtattt 31745271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 38674567 - 38674504
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||| || |||| |||||||||| |||||| ||||  ||||| ||||||||||||||||||||    
T  38674567 cacaagcattgtgacattgtgattggccaatatcacccaactccatgtcacccaagtattttcc 38674504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 48823938 - 48823891
Alignment:
Q  192 tgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||||    
T  48823938 tgtgacattgtgattggccaatgtcacccaactctatgtcacccaagt 48823891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 571560 - 571622
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaata 63  Q
    |||| ||||||||||| |||||| ||||| ||||||| |||||| || |||||| ||||||||    
T  571560 atttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaata 571622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 45728372 - 45728326
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgatt 206  Q
    |||||||||||||||||||||||||||| || ||||  |||||||||    
T  45728372 aatgcttgtgaaagagagagaaacacaagcattgtgatattgtgatt 45728326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 46932061 - 46931987
Alignment:
Q  181 aacacaaacactgtggcattgtgattagccaatgtcactaa---------actctatgtcacccaagtattttcc 246  Q
    |||||||||| ||||||||||||||| ||||||||||| ||         |||||||||||||||||||||||||    
T  46932061 aacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 46931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 5995373 - 5995418
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatgc 164  Q
    ||||||| |||||||||| |||||| ||||||| ||||||||||||    
T  5995373 tgacatagagtttgatgacattggtaacattggccaatcacaatgc 5995418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 6539702 - 6539669
Alignment:
Q  130 ttgatgatattggtgacattggtcaatcacaatg 163  Q
    |||||||||||||||||||||||||| |||||||    
T  6539702 ttgatgatattggtgacattggtcaaccacaatg 6539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 11795979 - 11795930
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 21630118 - 21630069
Alignment:
Q  169 gaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||| || |||| |||||||||| | |||||||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcac 21630069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 12043666 - 12043726
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccgga 71  Q
    |||||||||| |||||||| || |||| |||||  ||| || |||||||||||||||||||    
T  12043666 aatttttaacaagatacattaatttttgttgatttaaatttttcttataaataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 12062616 - 12062568
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccgg 70  Q
    |||||||||||||||| |||||| |||  ||| ||||||||||||||||    
T  12062616 agatacatcaacttttgttgatcaaaatatcttttataaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 12483712 - 12483760
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  12483712 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26471149 - 26471197
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  26471149 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27159442 - 27159490
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  27159442 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 36381596 - 36381640
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| | || |||||||||||||||||||| |||||||||||    
T  36381596 tgacatagaattcgatgatattggtgacattggccaatcacaatg 36381640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 37155050 - 37155094
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg 163  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||||    
T  37155050 tgacatagagtttggtgacattggtgacattggccaatcacaatg 37155094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 44668177 - 44668225
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  44668177 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 46334008 - 46333952
Alignment:
Q  183 cacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||| || |||| |||||||||| ||||||||||   |||||||||||||||||||    
T  46334008 cacaagcattgtgacattgtgattggccaatgtcatccaactctatgtcacccaagt 46333952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 48604996 - 48605064
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaact 224  Q
    |||||||  ||||||||||||||||||| ||| || |||| |||| | ||| |||||||||||| ||||    
T  48604996 tcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcactcaact 48605064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 63846 - 63758
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtatttt 244  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  63846 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtatttt 63758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41989484 - 41989404
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  41989484 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9395403 - 9395482
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  9395403 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26350427 - 26350348
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  26350427 atttggactgaatttttaactagatacatcaacttttattgattcaaaattcttttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 37642010 - 37642085
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37642010 tggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21575999 - 21576077
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21575999 atttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36563615 - 36563537
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  36563615 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 3899928 - 3899839
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttc 245  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  3899928 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagtattttc 3899839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13103077 - 13103156
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13103077 atttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11795221 - 11795299
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  11795221 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 16971233 - 16971143
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||  || |||||||||||||||||||||||    
T  16971233 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacccaagtctatgtcacccaagtattttcc 16971143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6126877 - 6126954
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6126877 atttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23359995 - 23360072
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  23359995 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37149032 - 37148955
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  37149032 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 17025683 - 17025755
Alignment:
Q  7 actgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  17025683 actgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13033104 - 13033183
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  13033104 atttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20848127 - 20848203
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||    
T  20848127 atttggactgaatttttaactagatacatcaatttttgttgc-ccaaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 19655247 - 19655147
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||||    
T  19655247 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaagtattttcc 19655148  T
Q  247 g 247  Q
    |    
T  19655147 g 19655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4444013 - 4444087
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  4444013 atttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 29699501 - 29699371
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcac--------aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagcc 210  Q
    ||||||| |||| | |||||||||||||||||| |||||||        |||||||||||||||||||||||||||| || ||||||||||||||| |||    
T  29699501 tgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggcc 29699402  T
Q  211 aatgtcactaaactctatgtcacccaagtattttccg 247  Q
    ||||||||      | |||||||||||||||||||||    
T  29699401 aatgtcac------caatgtcacccaagtattttccg 29699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 583042 - 583118
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||  |||||| |||||||||||    
T  583042 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 28819036 - 28818923
Alignment:
Q  134 tgatattggtgacattggtcaatca--------caatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactc 225  Q
    |||||||||||||||||||||||||        |||||||||||||||||||||||| ||||  | |||| ||||||||||  ||||||||||  |||||    
T  28819036 tgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatgtcacccaactc 28818937  T
Q  226 tatgtcacccaagt 239  Q
    ||||||||||||||    
T  28818936 tatgtcacccaagt 28818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 2953279 - 2953197
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||||||||||||||||        |||||||||||  ||||||||||  ||||||||||||||||||||||||||    
T  2953279 tcacaatgcttgtgaaagagagagaaacacaa--------gcattgtgattgaccaatgtcacccaactctatgtcacccaagtattttcc 2953197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 966206 - 966280
Alignment:
Q  6 gactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||| ||||||||  | |||| |||||||||| |||||||||||||||||| |||||| |||||    
T  966206 gactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaataggactggagggggtatt 966280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 3180109 - 3180171
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||||  ||||||||||    
T  3180109 tcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcac 3180171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 16439227 - 16439165
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || |||| ||||||||||  ||||||||||    
T  16439227 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcac 16439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 19598417 - 19598322
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcacta---------aactctatgtcacccaagtattttcc 246  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||  |||||||||| |         ||||||||||||||||||||||||||    
T  19598417 aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcacccaagtattttcc 19598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 26662488 - 26662405
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||| ||||||||| |||||||||||||| || |||  |||||||||| | |||||||||  ||||||||||||| |||||    
T  26662488 tcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagt 26662405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 26934083 - 26934000
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    ||||||| ||||||||| |||||||||||||| || |||  |||||||||| | |||||||||  ||||||||||||| |||||    
T  26934083 tcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagt 26934000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 38134422 - 38134505
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagt 239  Q
    |||||||||| |||||||||| |||||||||| || |||| |||||||||| |||||| |||   ||||||||||| |||||||    
T  38134422 tcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaatatcatccaactctatgtcgcccaagt 38134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 291186 - 291124
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||| |||||||||||| ||||| |||| || ||||||||||||||| |||||||||||    
T  291186 tcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatgtcac 291124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 16802533 - 16802471
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||| ||||||||||||||||||| | |||  |||||||||| |||||||||||    
T  16802533 tcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcac 16802471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 2093941 - 2094074
Alignment:
Q  119 tgacatatagtttgatgatattggtgacattggtcaatcacaatg--------cttgtgaaagagagagaaacacaaacactgtggcattgtgattagcc 210  Q
    ||||||| |||| | ||||||||||||||||| ||||||||||||        |||||||||||||||||||||||| || | ||  | ||||||||| |    
T  2093941 tgacatagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattatgatagtgtgattagtc 2094040  T
Q  211 aatgtcactaaactctatgtcacccaagtatttt 244  Q
    ||| ||||  || ||||||||| | |||||||||    
T  2094041 aatatcacccaattctatgtcaactaagtatttt 2094074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 39031180 - 39031232
Alignment:
Q  136 atattggtgacattggtcaatcacaatgcttgtgaaagagagagaaacacaaa 188  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||| |||||    
T  39031180 atatttgtgatattggtcaatcacaatgcttgtgaaagaaagagaaatacaaa 39031232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 12913888 - 12913830
Alignment:
Q  160 aatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||| ||||||  | |||| |||||||||| |||||||||||    
T  12913888 aatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatgtcac 12913830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggaggga 75  Q
    |||||| |||||||||||||||||||| |||| | |||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 20848120 - 20848072
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  20848120 acttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2366415 - 2366352
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaatag 64  Q
    |||||||||||| ||||||| | |||||| |||| || |||| ||||| |||||||||||||||    
T  2366415 atttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13539944 - 13539909
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttt 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  13539944 atttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 37641997 - 37641951
Alignment:
Q  34 ttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 78
Target Start/End: Complemental strand, 38361743 - 38361713
Alignment:
Q  48 aattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||    
T  38361743 aattctcttataaataggaccggagggagta 38361713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 1643466 - 1643495
Alignment:
Q  51 tctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||    
T  1643466 tctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 3549614 - 3549553
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggag 72  Q
    ||||||||||   |||||||||||||| || ||  ||| |||||||||||||||||||||||    
T  3549614 aatttttaaccgaatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 2953224 - 2953252
Alignment:
Q  141 ggtgacattggtcaatcacaatgcttgtg 169  Q
    |||||||||||||||||||||||||||||    
T  2953224 ggtgacattggtcaatcacaatgcttgtg 2953252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 3280421 - 3280469
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttata 59  Q
    |||||||||||||||||||||| |||  |||||||||  ||||||||||    
T  3280421 aatttttaactagatacatcaattttgtttgatccaactttctcttata 3280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 17849264 - 17849236
Alignment:
Q  134 tgatattggtgacattggtcaatcacaat 162  Q
    |||||||||||||||||||||||||||||    
T  17849264 tgatattggtgacattggtcaatcacaat 17849236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 36595846 - 36595782
Alignment:
Q  6 gactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccgg 70  Q
    ||||||||||||||  ||||||||||| |||| |||| | ||  |||||||||||||| ||||||    
T  36595846 gactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 37149039 - 37149087
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  37149039 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39290827 - 39290891
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaatagg 65  Q
    ||||||| | ||||||||| ||||||||| ||||||| ||||| | |  ||||||||||||||||    
T  39290827 atttggattaaatttttaattagatacattaacttttgttgattcgactttctcttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12913 - 12992
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  12913 atttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12906 - 12858
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  12906 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23838 - 23917
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  23838 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23831 - 23783
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  23831 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49558 - 49635
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  49558 atttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 49551 - 49502
Alignment:
Q  32 acttttattgatccaaaattctcttataaataggaccggagggagtattt 81  Q
    |||||| |||| | ||| |||||||||||||||||||||||| |||||||    
T  49551 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 6205 - 6129
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  6205 tggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 49752 - 49842
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcactaaactctatgtcacccaagtattttcc 246  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||| |||||||||||    
T  49752 tcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatgtcacctaactctatgtcaccgaagtattttcc 49842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1388 - 1453
Alignment:
Q  1 atttggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaatagga 66  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  1388 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 231377 - 231298
Alignment:
Q  4 tggactgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtatttga 83  Q
    ||||||||||||| |||||| || |||||||||| |||| | || |||||| ||||||||||||||||||||||||||||    
T  231377 tggactgaattttgaactaggtatatcaacttttgttgacctaatattctcctataaataggaccggagggagtatttga 231298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 231377 - 231433
Alignment:
Q  22 agatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 78  Q
    |||||||| ||||||| |||||||||  ||||||||||| ||||| |||||||||||    
T  231377 agatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 7096 - 7158
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||| |||||||||||    
T  7096 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcac 7158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 27277 - 27331
Alignment:
Q  164 cttgtgaaagagagagaaacacaaacactgtggcattgtgattagccaatgtcac 218  Q
    ||||||||||||||||||||| || || ||||||||||||||| |||||| ||||    
T  27277 cttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaatatcac 27331  T

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Target: scaffold1033 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 2302 - 2271
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  2302 tcacaatgcttgtgaaagagagagaaacacaa 2271  T

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Target: scaffold1029 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 2302 - 2271
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  2302 tcacaatgcttgtgaaagagagagaaacacaa 2271  T

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Target: scaffold0481 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 2936 - 2970
Alignment:
Q  156 tcacaatgcttgtgaaagagagagaaacacaaaca 190  Q
    |||||||| ||||||||||||||||||||||||||    
T  2936 tcacaatgtttgtgaaagagagagaaacacaaaca 2970  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 312781 - 312843
Alignment:
Q  11 aatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagg 73  Q
    |||||| ||||||||||||||| |||| |||||| |||| |||||| ||||||  ||||||||    
T  312781 aattttaaactagatacatcaatttttgttgatcaaaaagtctcttttaaataaaaccggagg 312843  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 77466 - 77495
Alignment:
Q  51 tctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||    
T  77466 tctcttataaataggaccggagggagtatt 77495  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 77372 - 77344
Alignment:
Q  50 ttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||    
T  77372 ttctcttataaataggaccggagggagta 77344  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 492332 - 492303
Alignment:
Q  50 ttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||    
T  492332 ttctcttataaataggaccggagggagtat 492303  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 16772 - 16800
Alignment:
Q  53 tcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||    
T  16772 tcttataaataggaccggagggagtattt 16800  T

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