View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9532_low_74 (Length: 216)
Name: NF9532_low_74
Description: NF9532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9532_low_74 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 33380134 - 33380320
Alignment:
| Q |
11 |
agattatacttgtacatgtagatgtcacgaccaggtaccaaacgacgtttacagagaaagcaagagcgtaagaaatcagggttgtgagtcatatcagctg |
110 |
Q |
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| T |
33380134 |
agattatacttgtacatgtagatgtcacgaccaggtaccaaacgacgtttacagagaaagcaagagcgtaagaaatcagggttgtgagtcatatcagctg |
33380233 |
T |
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| Q |
111 |
aatttcttctaaggtttctaggtgataccatggacataaccctgctctgatctgaaccgttgattccaggagaagttggtggatatg |
197 |
Q |
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| T |
33380234 |
aatttcttctaaggtttctaggtgataccatggacataaccctgctctgatctgaaccgttgattccaggagaagttggtggatatg |
33380320 |
T |
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