View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9533A_low_102 (Length: 285)
Name: NF9533A_low_102
Description: NF9533A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9533A_low_102 |
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Alignment Details
Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 134 - 264
Target Start/End: Original strand, 16353326 - 16353456
Alignment:
| Q |
134 |
aatatggtatgacgtatggaggacgaagcacgtgtagagggcggttatggagacctctattggatactatcagagagaagtcattcaatagaagtaatga |
233 |
Q |
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| T |
16353326 |
aatatggtatgacgtatggaggacgaagcacgtgtagagggcggttatggagacctctattggatactatcagagagaagtcattcaatagaagtaatga |
16353425 |
T |
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| Q |
234 |
atccgatttgaaagaatttctttgaagtttg |
264 |
Q |
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| T |
16353426 |
atccgatttgaaagaatttctttgaagtttg |
16353456 |
T |
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