View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9533A_low_150 (Length: 248)
Name: NF9533A_low_150
Description: NF9533A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9533A_low_150 |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 22421542 - 22421756
Alignment:
| Q |
27 |
aaccatttagagagagtaagaagaacacacatgttgaaaaagtgtataataatcaccaaaataaataacacgcttcaaatccaaagcaataacagcattg |
126 |
Q |
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| T |
22421542 |
aaccatttagagagagtaagaagaactcacatgttgaaaaagtgtataataatcaccaaaataaataacacgcttcaaatccaaagcaataacagcattg |
22421641 |
T |
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| Q |
127 |
aaaccttcaatcaaagccataagctccacaacaattttcctactttcattcccaacaacagccttagaaatttccaatatcaaattatcctcatcatcac |
226 |
Q |
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|||||||||||||||||||||||||||||| ||||||| | ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
22421642 |
aaaccttcaatcaaagccataagctccacagcaattttacgactctcattcccatcaacagtcttagaaatttccaatatcaaattatcctcatcatcac |
22421741 |
T |
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| Q |
227 |
aaacagcaactccaa |
241 |
Q |
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|||||||||| |||| |
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| T |
22421742 |
aaacagcaacaccaa |
22421756 |
T |
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