View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9533A_low_186 (Length: 238)

Name: NF9533A_low_186
Description: NF9533A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9533A_low_186
NF9533A_low_186
[»] chr7 (18 HSPs)
chr7 (30-198)||(22245648-22245816)
chr7 (33-137)||(8779870-8779973)
chr7 (17-137)||(8786709-8786828)
chr7 (33-114)||(4460240-4460322)
chr7 (121-185)||(15706623-15706685)
chr7 (51-155)||(48804528-48804632)
chr7 (50-117)||(39271738-39271805)
chr7 (39-128)||(4465218-4465305)
chr7 (51-117)||(12199774-12199840)
chr7 (33-97)||(4541729-4541794)
chr7 (30-74)||(8837126-8837169)
chr7 (33-119)||(11483298-11483383)
chr7 (84-178)||(17205939-17206030)
chr7 (41-97)||(17912155-17912211)
chr7 (57-145)||(25180617-25180705)
chr7 (84-184)||(13435462-13435556)
chr7 (33-93)||(4982619-4982680)
chr7 (41-97)||(30063424-30063480)
[»] chr6 (34 HSPs)
chr6 (48-185)||(25949900-25950037)
chr6 (48-180)||(25964494-25964632)
chr6 (48-180)||(25969141-25969279)
chr6 (48-180)||(25973581-25973719)
chr6 (17-137)||(26018505-26018624)
chr6 (121-185)||(17744102-17744166)
chr6 (17-137)||(26139209-26139328)
chr6 (51-145)||(17283443-17283537)
chr6 (41-181)||(14894001-14894139)
chr6 (17-97)||(26157878-26157957)
chr6 (27-95)||(29094098-29094168)
chr6 (33-97)||(19695972-19696037)
chr6 (30-75)||(19994157-19994202)
chr6 (12-97)||(20217940-20218024)
chr6 (12-97)||(22111965-22112049)
chr6 (121-185)||(4188807-4188870)
chr6 (41-117)||(15172794-15172869)
chr6 (121-185)||(19074705-19074768)
chr6 (17-117)||(25338675-25338775)
chr6 (51-181)||(24512169-24512297)
chr6 (39-97)||(26822425-26822483)
chr6 (17-114)||(25922827-25922924)
chr6 (50-115)||(26474531-26474596)
chr6 (17-97)||(25508136-25508215)
chr6 (51-129)||(18233244-18233322)
chr6 (107-181)||(19569539-19569611)
chr6 (17-74)||(18627978-18628036)
chr6 (131-185)||(23492974-23493027)
chr6 (148-185)||(18449443-18449480)
chr6 (33-97)||(23346639-23346704)
chr6 (30-74)||(23523427-23523472)
chr6 (41-129)||(24392324-24392410)
chr6 (41-94)||(25030598-25030651)
chr6 (17-74)||(29254530-29254586)
[»] chr3 (22 HSPs)
chr3 (31-185)||(17051294-17051447)
chr3 (51-181)||(2722537-2722668)
chr3 (121-185)||(3244438-3244502)
chr3 (107-185)||(47975443-47975522)
chr3 (123-185)||(3249569-3249631)
chr3 (51-132)||(16034677-16034759)
chr3 (122-185)||(1991480-1991543)
chr3 (121-185)||(10607640-10607703)
chr3 (121-185)||(16384814-16384878)
chr3 (39-117)||(11826856-11826932)
chr3 (17-75)||(13418937-13418995)
chr3 (131-185)||(26169643-26169696)
chr3 (148-185)||(10601328-10601365)
chr3 (41-128)||(11577184-11577269)
chr3 (51-129)||(34053020-34053099)
chr3 (33-94)||(8685311-8685373)
chr3 (41-117)||(11848314-11848388)
chr3 (17-70)||(17210131-17210183)
chr3 (17-74)||(22039383-22039440)
chr3 (78-181)||(36079674-36079772)
chr3 (27-117)||(27407769-27407858)
chr3 (107-181)||(42243920-42243993)
[»] chr2 (13 HSPs)
chr2 (78-185)||(23341173-23341279)
chr2 (121-185)||(20282776-20282840)
chr2 (27-94)||(21344000-21344068)
chr2 (41-124)||(16440345-16440428)
chr2 (33-117)||(21131502-21131587)
chr2 (27-94)||(23704835-23704903)
chr2 (27-117)||(20851-20939)
chr2 (63-117)||(28496270-28496324)
chr2 (12-116)||(29576790-29576896)
chr2 (33-97)||(19012473-19012537)
chr2 (17-74)||(24365804-24365861)
chr2 (41-97)||(24322366-24322422)
chr2 (110-181)||(32440778-32440847)
[»] scaffold0360 (1 HSPs)
scaffold0360 (105-185)||(5487-5567)
[»] chr4 (13 HSPs)
chr4 (27-181)||(11902001-11902155)
chr4 (27-117)||(10731691-10731780)
chr4 (27-117)||(10945460-10945549)
chr4 (121-185)||(11048920-11048984)
chr4 (41-124)||(8561753-8561836)
chr4 (30-75)||(9192801-9192846)
chr4 (33-97)||(11921907-11921972)
chr4 (121-185)||(40559949-40560012)
chr4 (107-181)||(10731824-10731896)
chr4 (107-181)||(10945593-10945665)
chr4 (39-97)||(5676038-5676096)
chr4 (63-117)||(7197831-7197885)
chr4 (39-116)||(25190753-25190828)
[»] scaffold0175 (1 HSPs)
scaffold0175 (121-185)||(11981-12045)
[»] chr8 (10 HSPs)
chr8 (51-181)||(15760162-15760290)
chr8 (121-185)||(33633100-33633163)
chr8 (51-181)||(25397534-25397662)
chr8 (51-117)||(22285577-22285643)
chr8 (33-97)||(18008665-18008730)
chr8 (131-185)||(23694436-23694488)
chr8 (104-185)||(14877701-14877779)
chr8 (17-97)||(21319970-21320052)
chr8 (51-117)||(42417935-42418001)
chr8 (121-181)||(18959829-18959887)
[»] scaffold0197 (1 HSPs)
scaffold0197 (52-181)||(8210-8332)
[»] chr5 (12 HSPs)
chr5 (104-185)||(20915363-20915444)
chr5 (121-185)||(25577011-25577074)
chr5 (121-185)||(34780974-34781037)
chr5 (33-117)||(12411089-12411174)
chr5 (33-97)||(16677640-16677705)
chr5 (51-124)||(20167624-20167697)
chr5 (30-75)||(20738902-20738947)
chr5 (50-117)||(21382859-21382926)
chr5 (51-129)||(21999945-22000024)
chr5 (148-185)||(20968407-20968444)
chr5 (78-115)||(23435933-23435970)
chr5 (78-115)||(23447300-23447337)
[»] scaffold0713 (1 HSPs)
scaffold0713 (30-137)||(6128-6234)
[»] chr1 (18 HSPs)
chr1 (121-185)||(17987221-17987285)
chr1 (39-181)||(21240636-21240778)
chr1 (121-185)||(18379595-18379659)
chr1 (122-185)||(41228946-41229008)
chr1 (50-177)||(41802853-41802973)
chr1 (57-129)||(39286041-39286114)
chr1 (121-181)||(23289364-23289423)
chr1 (51-181)||(17717344-17717472)
chr1 (52-125)||(8649471-8649545)
chr1 (17-74)||(49056014-49056072)
chr1 (121-185)||(44538852-44538914)
chr1 (121-185)||(20405365-20405428)
chr1 (110-181)||(20412893-20412962)
chr1 (50-117)||(28208464-28208531)
chr1 (33-97)||(20498118-20498183)
chr1 (33-97)||(20860157-20860222)
chr1 (41-94)||(23299459-23299512)
chr1 (33-97)||(25404542-25404607)
[»] scaffold0142 (1 HSPs)
scaffold0142 (121-185)||(24621-24684)
[»] scaffold0046 (1 HSPs)
scaffold0046 (121-185)||(21121-21184)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-185)||(53461-53524)
[»] scaffold0450 (1 HSPs)
scaffold0450 (121-185)||(79-142)
[»] scaffold0093 (1 HSPs)
scaffold0093 (121-185)||(27660-27723)
[»] scaffold0081 (1 HSPs)
scaffold0081 (121-181)||(51133-51192)
[»] scaffold0021 (2 HSPs)
scaffold0021 (121-185)||(13701-13764)
scaffold0021 (17-155)||(100753-100886)
[»] scaffold0168 (1 HSPs)
scaffold0168 (51-129)||(8261-8340)
[»] scaffold0031 (1 HSPs)
scaffold0031 (51-129)||(23853-23932)
[»] scaffold0251 (1 HSPs)
scaffold0251 (148-185)||(18294-18331)
[»] scaffold0125 (1 HSPs)
scaffold0125 (148-185)||(43335-43372)
[»] scaffold0001 (2 HSPs)
scaffold0001 (33-100)||(521313-521381)
scaffold0001 (121-185)||(182055-182118)
[»] scaffold0098 (1 HSPs)
scaffold0098 (50-124)||(43743-43817)
[»] scaffold0443 (1 HSPs)
scaffold0443 (33-117)||(3905-3990)
[»] scaffold0362 (1 HSPs)
scaffold0362 (17-126)||(8655-8763)
[»] scaffold0213 (1 HSPs)
scaffold0213 (148-181)||(15940-15973)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-97)||(14644-14709)
[»] scaffold0074 (1 HSPs)
scaffold0074 (41-129)||(22169-22255)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-129)||(31687-31773)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 22245816 - 22245648
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22245816 aatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 22245717  T
Q  130 caattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaatagtggcatttgc 198  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22245716 caattaaaaattcaaattttttaacctttgaaactttcatctaatcattattaaaatagtagcatttgc 22245648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 8779973 - 8779870
Alignment:
Q  33 ataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaa 132  Q
    ||||||||||||||||||||||| |||| ||||||||||| | | ||| | |||||||||||||| || |  || | |||||||||| ||||||||| ||    
T  8779973 ataaagtttaggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatcccaaggcgcttttattttattattgttattttcttttaa 8779875  T
Q  133 ttaaa 137  Q
    |||||    
T  8779874 ttaaa 8779870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 8786828 - 8786709
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || |||||||||||||||||||||||||| |||| ||||||||||| | | ||| | |||||||||| ||| || |  || | |||||||    
T  8786828 agaaagtaggtcaaatataaagtttaggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatctcaaggcgcttttattttattat 8786730  T
Q  117 tgtaattttctttcaattaaa 137  Q
    ||| ||||||||| |||||||    
T  8786729 tgttattttcttttaattaaa 8786709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 4460322 - 4460240
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattatt 114  Q
    |||||||| |||||||| |||||| |||| ||||| ||||||||  ||||| |||||||||||||| ||||| ||||||||||    
T  4460322 ataaagttctaggtttaaggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaaggcacctttttattatt 4460240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 15706685 - 15706623
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| |||||||||| ||| ||||  ||||||||||||| ||||||||||||||||||||    
T  15706685 attttcttttaattaaaaatccaactttt--aacctttgaaactttcatctaatcattattaaaa 15706623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 48804528 - 48804632
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttt 150  Q
    ||||| |||| ||||||||||||| | ||| | ||||||||||| || || || ||||||||||||||| |||||| |||  |||||||| |||| |||     
T  48804528 gtttggtttgtgaagggtttgtcattatgatgtaccaataatccgaaggcgcctttttattattattgttattttcattctgttaaaaatccaaacttta 48804627  T
Q  151 taacc 155  Q
    |||||    
T  48804628 taacc 48804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 39271738 - 39271805
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||| |||| |||||||||||| |  |||||||||||||||||||| || | ||||||||||||||    
T  39271738 ggtttggtttgtgaagggtttgtcgccatgacggaccaataatcccaaggctctcttttattattatt 39271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 4465305 - 4465218
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctt 128  Q
    ||||||||||||||||| |||| ||||| ||||||||  ||||| || ||||||||| |   || |||||||||||||||| ||||||||    
T  4465305 tttaggtttagggtttggtttgtgaaggatttgtcaccatgacgaactaataatcccta--gacgcttttattattattgttattttctt 4465218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 12199774 - 12199840
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||| ||||||||||||||  |||||||||||| ||||||| || | ||||||||||||||    
T  12199774 gtttggtttgtgaagggtttgtcaccgtgacggaccaatgatcccaaggctctcttttattattatt 12199840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 4541729 - 4541794
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||  ||||| ||||||||||||||    
T  4541729 ataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaa 4541794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 8837126 - 8837169
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtca 74  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  8837126 aatataaagtttaggtttagggtttg-tttgtgaagggtttgtca 8837169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 11483383 - 11483298
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgt 119  Q
    |||||||| ||||||||||||||| |||| | ||||||||||||  ||| ||||||||||||| || |  | ||||||||||||||||    
T  11483383 ataaagttctaggtttagggtttggtttgtgtagggtttgtcaccatgatggaccaataatcctaagg--cgcttttattattattgt 11483298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 178
Target Start/End: Complemental strand, 17206030 - 17205939
Alignment:
Q  84 accaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcatt 178  Q
    ||||||||||||||  |||| |||||||| |||||| |||||  ||||| ||||||| |||| ||||||||   | |||||||||||||| ||||    
T  17206030 accaataatcccaagacacctttttattactattgttattttaattcaaataaaaatccaaactttttaac---ttaaactctcatctaaccatt 17205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 17912155 - 17912211
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| ||||||||||||||    
T  17912155 taggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaa 17912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 25180705 - 25180617
Alignment:
Q  57 tttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaa 145  Q
    |||| ||||| ||||||||  | | |||||||| |||||||  |||| ||||||||||||||| |||||| |||  |||||||||||||    
T  25180705 tttgtgaaggatttgtcaccataatggaccaatgatcccaagacacctttttattattattgttattttcattctgttaaaaattcaaa 25180617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 13435462 - 13435556
Alignment:
Q  84 accaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaa 183  Q
    |||||||||||||| || || |||||||||||||   ||||||||| |||||||| | |||| ||| ||| ||   ||||||||||||||||||||||||    
T  13435462 accaataatcccaaggctcc-ttttattattatt---attttcttttaattaaaattccaaactttataatctc--aaactctcatctaatcattattaa 13435555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 4982680 - 4982619
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatc 93  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||  ||||  ||||||||||    
T  4982680 ataaagttctaggtttagggtttggtttgtgaagggtttgtcaccatgacaaaccaataatc 4982619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 30063480 - 30063424
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||||||||||| |||  ||||| ||||||||  ||||| ||||||||||||||    
T  30063480 taggtttagggtttggtttctgaaggatttgtcaccatgacgaaccaataatcccaa 30063424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 25949900 - 25950037
Alignment:
Q  48 agggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaatt 147  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||  ||||||||| |||| |    
T  25949900 agggtttggattgagaagggtttgtcactttgacggaccaataatcccaagacacccttttattattattgttattttcttttgattaaaaatccaaact 25949999  T
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||| ||||||||| ||||||||||| ||||||||    
T  25950000 ttttaacgtttgaaactttcatctaatcagtattaaaa 25950037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 25964494 - 25964632
Alignment:
Q  48 agggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcaccctt------ttattattattgtaattttctttcaattaaaaatt 141  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||      ||||||||||||  ||||||||||||||||||||     
T  25964494 agggtttggattgagaagggtttgtcactttgacggaccaataatcccagggcacccttttattattattattattggtattttctttcaattaaaaatc 25964593  T
Q  142 caaattttttaacctttgaaactctcatctaatcattat 180  Q
    |||| |||||||| ||||||||| |||||||||||||||    
T  25964594 caaactttttaacttttgaaactttcatctaatcattat 25964632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 25969141 - 25969279
Alignment:
Q  48 agggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcaccctt------ttattattattgtaattttctttcaattaaaaatt 141  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||      ||||||||||||  ||||||||||||||||||||     
T  25969141 agggtttggattgagaagggtttgtcactttgacggaccaataatcccagggcacccttttattattattattattggtattttctttcaattaaaaatc 25969240  T
Q  142 caaattttttaacctttgaaactctcatctaatcattat 180  Q
    |||| |||||||| ||||||||| |||||||||||||||    
T  25969241 caaactttttaacttttgaaactttcatctaatcattat 25969279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 25973581 - 25973719
Alignment:
Q  48 agggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcaccctt------ttattattattgtaattttctttcaattaaaaatt 141  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||      ||||||||||||  ||||||||||||||||||||     
T  25973581 agggtttggattgagaagggtttgtcactttgacggaccaataatcccagggcacccttttattattattattattggtattttctttcaattaaaaatc 25973680  T
Q  142 caaattttttaacctttgaaactctcatctaatcattat 180  Q
    |||| |||||||| ||||||||| |||||||||||||||    
T  25973681 caaactttttaacttttgaaactttcatctaatcattat 25973719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 26018505 - 26018624
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || |||||||||||||||||||||||||| |||| |||||  |||||||| ||||| |||||||||||||| || |  || | |||||||    
T  26018505 agaaagtaggtccaatataaagtttaggtttagggtttg-tttgtgaaggaattgtcactatgacgaaccaataatcccaaggcgcttttattttattat 26018603  T
Q  117 tgtaattttctttcaattaaa 137  Q
    ||| ||||||||| |||||||    
T  26018604 tgttattttcttttaattaaa 26018624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 17744102 - 17744166
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| |||||||||| |||| |||||||||||||||| | ||||||||||||||||||||    
T  17744102 attttcttttaattaaaaatccaaactttttaacctttgaaattttcatctaatcattattaaaa 17744166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 26139209 - 26139328
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || |||||||||||||||||||||||||| |||| |||||  |||||||| ||||| |||||||||||||| || |  || | |||||||    
T  26139209 agaaagtaggtccaatataaagtttaggtttagggtttg-tttgtgaaggaattgtcactatgacgaaccaataatcccaaggcgctattattttattat 26139307  T
Q  117 tgtaattttctttcaattaaa 137  Q
    | | ||||||||| |||||||    
T  26139308 tattattttcttttaattaaa 26139328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 17283537 - 17283443
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaa 145  Q
    ||||| |||| ||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||||||| |||| | |||  |||||||| ||||    
T  17283537 gtttggtttgtgaagggtttgtcattatgacgaaccaataatcccaatgcacctttttattattattgttatttacattcggttaaaaatccaaa 17283443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 14894001 - 14894139
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaat 140  Q
    ||||||||||||||| | || ||||| ||||||||  ||| | |||||||||||||| || |  | ||||||||||| | |||||| ||||||| |||||    
T  14894001 taggtttagggtttggtatgtgaaggatttgtcaccatgatgaaccaataatcccaaggcgctttattattattattattattttcattcaattgaaaat 14894100  T
Q  141 tcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
     |||| |||||||  | | ||||| ||||||||||||||||    
T  14894101 ccaaactttttaa--tctcaaactttcatctaatcattatt 14894139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 26157878 - 26157957
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||| | || |||||||||||||||||||||||||| |||| |||||  |||||||| ||||| ||||||||||||||    
T  26157878 agaaagtaggtccaatataaagtttaggtttagggtttg-tttgtgaaggaattgtcactatgacgaaccaataatcccaa 26157957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 29094098 - 29094168
Alignment:
Q  27 tctaatataaagttt-aggtttagggtttgattt-gagaagggtttgtcactttgacggaccaataatccc 95  Q
    ||||| ||||||||| ||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  29094098 tctaacataaagttttaggtttaaggtttgattttgagaagggtttgtcaccatgacggaccaataatccc 29094168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 19695972 - 19696037
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||  ||||| ||||||||||||||    
T  19695972 ataaagttctaggtttagggtttgatttgtgaaggatttgtcaccatgacgaaccaataatcccaa 19696037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 19994157 - 19994202
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtcac 75  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  19994157 aatataaagtttaggtttagggtttgttttgtgaagggtttgtcac 19994202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 20218024 - 20217940
Alignment:
Q  12 tcatcagaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||| ||||||| | || |||||||||||||||||||||||||| |||| ||||||||||| | | ||| | ||||||||||||||    
T  20218024 tcattagaaagtaggtcaaatataaagtttaggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatcccaa 20217940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 22112049 - 22111965
Alignment:
Q  12 tcatcagaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||| ||||||| | || |||||||||||||||||||||||||| |||| ||||||||||| | | ||| | ||||||||||||||    
T  22112049 tcattagaaagtaggtcaaatataaagtttaggtttagggtttg-tttgtgaagggtttgttattatgatgaaccaataatcccaa 22111965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 4188807 - 4188870
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  4188807 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 4188870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 15172794 - 15172869
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||||||||||||||||  | |||||||||||||    
T  15172794 taggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaaagc-gctttttattattatt 15172869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 19074768 - 19074705
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  19074768 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 19074705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 25338775 - 25338675
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || ||||||||||||||||||||||||||   || ||||||||||||| |  || | | |||||||||||| || || ||||||||||||    
T  25338775 agaaagtgggtccaatataaagtttaggtttagggtttgggatgtgaagggtttgtcattaagatgaatcaataatcccaaggcgcctttttattattat 25338676  T
Q  117 t 117  Q
    |    
T  25338675 t 25338675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 24512169 - 24512297
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttt 150  Q
    ||||| |||| || |||||||||| | ||||  |||||||||| ||| || || ||||||||||||||| | |||| |||| ||||||||  ||| |||     
T  24512169 gtttggtttgtgatgggtttgtcattatgacaaaccaataatctcaaggcgcctttttattattattgttaatttcattcagttaaaaatcaaaacttta 24512268  T
Q  151 taacctttgaaactctcatctaatcattatt 181  Q
    |||  | | ||||||||||||||||||||||    
T  24512269 taa--tctcaaactctcatctaatcattatt 24512297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 26822425 - 26822483
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||||| |||||| |||| ||||||||||||||  ||||| ||||||||||||||    
T  26822425 tttaggtttaaggtttggtttgtgaagggtttgtcaccatgacgaaccaataatcccaa 26822483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 25922924 - 25922827
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattatt 114  Q
    ||||||| | || |||||||||||||||||||||||||| |||  ||||| ||||||||   || | |||||||||| ||| || | |||||||||||    
T  25922924 agaaagtaggtccaatataaagtttaggtttagggtttggtttatgaaggatttgtcaccaagatgaaccaataatctcaaggcgctcttttattatt 25922827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 26474531 - 26474596
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattatta 115  Q
    |||||| |||| ||| | |||||| | |||||||||||||||||||||||| | ||||||||||||    
T  26474531 ggtttggtttgtgaaagatttgtctccttgacggaccaataatcccaaagctctcttttattatta 26474596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 25508136 - 25508215
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||| | || ||||||||||| |||||||||||||| |||| |||||  |||||||| ||| | ||||||||||||||    
T  25508136 agaaagtaggtccaatataaagttaaggtttagggtttg-tttgtgaaggaattgtcactatgaggaaccaataatcccaa 25508215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 18233322 - 18233244
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    ||||| |||| ||||||||| ||||| ||| ||||||||||||||||  |||| ||||| |||||||||| |||||||||    
T  18233322 gtttggtttgtgaagggttt-tcactatgatggaccaataatcccaagacacctcttttgttattattgttattttcttt 18233244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 19569611 - 19569539
Alignment:
Q  107 ttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||||| | ||||||||| |||||||||| |||| ||| |||  | | ||||||||||||||||||||||    
T  19569611 ttattattattattattttcttttaattaaaaatccaaactttataa--tctcaaactctcatctaatcattatt 19569539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18627978 - 18628036
Alignment:
Q  17 agaaagttgctctaatataaagtt-taggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||| | || ||||||||||| ||||||||||||||| |||| |||||||||||||    
T  18627978 agaaagtagatccaatataaagttctaggtttagggtttggtttgtgaagggtttgtca 18628036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 23492974 - 23493027
Alignment:
Q  131 aattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||||| |||| |||| ||||||||||||| ||||||||||||| ||||||    
T  23492974 aattaaaaatccaaactttt-aacctttgaaactttcatctaatcatttttaaaa 23493027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 18449443 - 18449480
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  18449443 ttttaacctttgaaaccttcatctaatcattattaaaa 18449480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 23346704 - 23346639
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||  ||||| |||| |||||||||    
T  23346704 ataaagttataggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccagtaatcccaa 23346639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 23523472 - 23523427
Alignment:
Q  30 aatataaagtt-taggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||    
T  23523472 aatataaagttctaggtttagggtttggtttgtgaagggtttgtca 23523427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 24392410 - 24392324
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 129  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| || | |||||| || |  | |||||||||||||||| |||||||||    
T  24392410 taggtttagggtttggtttgtgaaggatttgtcaccatgacgaactagtaatcctaagg--ctcttttattattattgttattttcttt 24392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 25030651 - 25030598
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcc 94  Q
    ||||||||||||||| |||| |||||||||||||||  ||  ||||||||||||    
T  25030651 taggtttagggtttggtttgtgaagggtttgtcactaagatagaccaataatcc 25030598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 29254530 - 29254586
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||| | || ||||||||||||||||| |||||||| ||| ||||||||||||||    
T  29254530 agaaagtaggtccaatataaagtttaggttgagggtttg-tttaagaagggtttgtca 29254586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 17051294 - 17051447
Alignment:
Q  31 atataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttc 130  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||    || | ||||||||||||||  |||  ||||||||||||||| ||||||||||    
T  17051294 atataaagtttaggtttagggtttggtttgtgaaggttttgtcatcaagatgaaccaataatcccaagacact-ttttattattattgttattttctttc 17051392  T
Q  131 aattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  17051393 aattaaaaattcaaactttttaacctttcaaactttcatctaatcattattaaaa 17051447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 2722537 - 2722668
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcaccctt---ttattattattgtaattttctttcaattaaaaattcaaatt 147  Q
    ||||| |||| ||| ||||||||| | ||||| |||||||||||||| || || ||   ||||||||||| | ||||||||| |||||||||| |||| |    
T  2722537 gtttggtttgtgaaaggtttgtcattatgacgaaccaataatcccaatgcgcctttttattattattattattattttcttttaattaaaaatccaaact 2722636  T
Q  148 ttttaacctttgaaactctcatctaatcattatt 181  Q
    || ||| |||  ||||||||||||||||||||||    
T  2722637 ttataatctt--aaactctcatctaatcattatt 2722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 3244502 - 3244438
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| |||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||    
T  3244502 attttcttttaattaaaaatccaaactttttaaccttcgaaactttcatctaatcattattaaaa 3244438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 47975443 - 47975522
Alignment:
Q  107 ttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctc-atctaatcattattaaaa 185  Q
    ||||||||||| | ||||||||| ||||||||||||||| ||||| |||||||||||| || ||||||||||| ||||||    
T  47975443 ttattattattattattttcttttaattaaaaattcaaactttttgacctttgaaactttcaatctaatcattgttaaaa 47975522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 3249631 - 3249569
Alignment:
Q  123 tttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||| |||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||    
T  3249631 tttcttttaattaaaaatccaaactttttaaccttcgaaactttcatctaatcattattaaaa 3249569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 16034677 - 16034759
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttctttcaa 132  Q
    ||||| |||| ||||||||||||| | ||||| ||||||||||||||  |||| |||||||||||||||| ||||||||||||    
T  16034677 gtttggtttgtgaagggtttgtcattatgacgaaccaataatcccaagacacctcttttattattattgttattttctttcaa 16034759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 1991480 - 1991543
Alignment:
Q  122 ttttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||| |||||||||| |||| |||| |||||| |||||| ||||||||||||||||||||    
T  1991480 ttttcttttaattaaaaatccaaacttttaaaccttcgaaactttcatctaatcattattaaaa 1991543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 10607703 - 10607640
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  10607703 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 10607640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 16384878 - 16384814
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  ||||||||| || ||  ||||||||||||||||| ||||||||||||||||||||    
T  16384878 attttcttataattaaaaaatccaaacttttaacctttgaaactttcatctaatcattattaaaa 16384814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 11826932 - 11826856
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||||| ||||||||||| ||||||||| ||||  |||| |||||||||||||||   || ||||||||||||||    
T  11826932 tttaggtttaaggtttgatttgtgaagggtttatcaccatgaccgaccaataatcccaa--gactcttttattattatt 11826856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 13418937 - 13418995
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcac 75  Q
    ||||||| | || |||||||||||||||| ||||||||| |||| ||||||||||||||    
T  13418937 agaaagtaggtccaatataaagtttaggtatagggtttggtttgtgaagggtttgtcac 13418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 26169696 - 26169643
Alignment:
Q  131 aattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  26169696 aattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 26169643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 10601365 - 10601328
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  10601365 ttttaacctttgaaactttcatctaatcattattaaaa 10601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 11577269 - 11577184
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctt 128  Q
    ||||||||||||||| |||| ||||| |||||| |  ||||| |||||||||||||| |    ||||||||||||| |||||||||||    
T  11577269 taggtttagggtttggtttgtgaaggatttgtcgccatgacgaaccaataatcccaagg--tgcttttattattatagtaattttctt 11577184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 34053099 - 34053020
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    ||||| |||| ||||||||||||| | ||||| |||||||| |||||  |||| |||||||||||| ||| |||||||||    
T  34053099 gtttggtttgtgaagggtttgtcattatgacgaaccaataaccccaagacacctcttttattattactgttattttcttt 34053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 8685373 - 8685311
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcc 94  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||  ||||| |||||||||||    
T  8685373 ataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcc 8685311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 11848388 - 11848314
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||||||||||||| ||||  |||| ||||||||  ||||| |||||||||||||| |  | ||||||||||||||    
T  11848388 taggtttagggtttggtttgttaaggatttgtcaccatgacgaaccaataatcccaagg--cgcttttattattatt 11848314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 17210131 - 17210183
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggttt 70  Q
    ||||||| | || |||||||||||||||||||||||||| |||| |||||||||    
T  17210131 agaaagtaggtccaatataaagtttaggtttagggtttg-tttgtgaagggttt 17210183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 22039383 - 22039440
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||| | || ||||||||||||||||||| |||||| |||| ||||| |||||||    
T  22039383 agaaagtaggtccaatataaagtttaggtttatggtttggtttgtgaaggttttgtca 22039440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 36079674 - 36079772
Alignment:
Q  78 tgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcat 177  Q
    |||| ||||||||||||||| || | |||||  ||||||| || |||||||| |||||||||| |||| ||| ||| ||   ||||||||||||||||||    
T  36079674 tgacagaccaataatcccaaggctctctttt--tattattata-ttttcttttaattaaaaatccaaactttataatctc--aaactctcatctaatcat 36079768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 27407769 - 27407858
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||||||| |||||||| |||||| |||| ||||||||||||||  |||  ||||||||||| ||| |  | ||||||||||||||    
T  27407769 tctaacataaagttctaggtttaaggtttggtttgtgaagggtttgtcaccatgatcgaccaataatctcaagg--ctcttttattattatt 27407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 42243993 - 42243920
Alignment:
Q  107 ttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctc-atctaatcattatt 181  Q
    ||||||||||| | |||||| ||||||||||||| |||| |||||||  | | |||||||| ||||||||||||||    
T  42243993 ttattattattattattttcattcaattaaaaatccaaactttttaa--tctcaaactctcaatctaatcattatt 42243920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 23341173 - 23341279
Alignment:
Q  78 tgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcat 177  Q
    |||||||||||||||||||| ||||||||||||||||| | || ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  23341173 tgacggaccaataatcccaaggcacccttttattattagt-tacttttctttcaattaaaaatccaaaatttttaacctttgaaactttcatctaatcat 23341271  T
Q  178 tattaaaa 185  Q
    | ||||||    
T  23341272 tgttaaaa 23341279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 20282776 - 20282840
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||    
T  20282776 attttcttttaattaaaaattcaaactttttaaccttcgaaaccttcatctaatcattattaaaa 20282840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 21344068 - 21344000
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcc 94  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||| ||||    
T  21344068 tctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaatgatcc 21344000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 16440345 - 16440428
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattt 124  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||  ||||||||||| || ||||| ||||||||||||||| ||||    
T  16440345 taggtttagggtttggtttgtgaaggatttgtcaccatgacaaaccaataatcctaaggcacctttttattattattgttattt 16440428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 21131587 - 21131502
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||| ||||||||||||||| |||| |||||||||||||  | || | |||||||||||||| || || |||||||||||||    
T  21131587 ataaagttctaggtttagggtttggtttgtgaagggtttgtcatctagatgaaccaataatcccaaggcgcctttttattattatt 21131502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 23704835 - 23704903
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcc 94  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||| ||  ||||| |||||||||||    
T  23704835 tctaacataaagttctaggtttaaggtttgatttgagaagggtttgttaccatgacgtaccaataatcc 23704903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 20939 - 20851
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||||||| ||| |||| |||||||||||||| |||||||||||  |||||||||||| ||||||| |  | ||||||||||||||    
T  20939 tctaacataaagttctagatttaaggtttgatttgaga-gggtttgtcaccatgacggaccaatgatcccaagg--ctcttttattattatt 20851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 28496324 - 28496270
Alignment:
Q  63 aagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||||||||  |||||||||||| ||||||| || | ||||||||||||||    
T  28496324 aagggtttgtcaccatgacggaccaatgatcccaaggctctcttttattattatt 28496270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 29576896 - 29576790
Alignment:
Q  12 tcatcagaaagttgctctaatataaagtt-taggtttagggttt-gatttgagaagggtttgtcactttgacggaccaataatcccaaagcaccctttta 109  Q
    |||| ||||||| | ||||| |||||||| |||||||| ||||| | |||| ||||||||||||| | ||| | |||||||||||||| || |  |||||    
T  29576896 tcattagaaagtaggtctaacataaagttataggtttaaggttttggtttgtgaagggtttgtcattatgatgaaccaataatcccaaggctctttttta 29576797  T
Q  110 ttattat 116  Q
    |||||||    
T  29576796 ttattat 29576790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 19012537 - 19012473
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||||  ||||| ||||||||||||||    
T  19012537 ataaagttctaggtttagg-tttgatttgtgaaggatttgtcaccatgacgaaccaataatcccaa 19012473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 24365861 - 24365804
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||| | || |||||||||||||||||||||||||| |||| ||| | |||||||    
T  24365861 agaaagtaggtccaatataaagtttaggtttagggtttggtttgggaaagttttgtca 24365804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 24322366 - 24322422
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||||||||||| |||| ||||| ||||||||  ||| | ||||||||||||||    
T  24322366 taggtttagggtttggtttgtgaaggatttgtcaccatgatgaaccaataatcccaa 24322422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 32440847 - 32440778
Alignment:
Q  110 ttattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    |||||||| | ||||||||| |||||||||| |||| ||| |||  | | ||||||||||||||||||||||    
T  32440847 ttattattattattttcttttaattaaaaatccaaactttataa--tatcaaactctcatctaatcattatt 32440778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 5567 - 5487
Alignment:
Q  105 ttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  5567 ttttattattattattattttcttttaattaaaaatccaaattttttaacctttgaaactttcatctaatcattattaaaa 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 11902155 - 11902001
Alignment:
Q  27 tctaatataaagtt-taggtttagggttt-gatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattt 124  Q
    ||||| |||||||| |||||||| ||||| | |||| ||||||||||||| | ||||| |||||||||||||| || || ||||||||||||||| ||||    
T  11902155 tctaacataaagttctaggtttaaggttttggtttgtgaagggtttgtcattatgacgaaccaataatcccaaggcgcctttttattattattgttattt 11902056  T
Q  125 tctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    || |||| |||||||| |||| ||| |||  | | ||| ||||||||||||||||||    
T  11902055 tcattcagttaaaaatccaaactttataa--tctcaaattctcatctaatcattatt 11902001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 10731691 - 10731780
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||   || ||||||||||||||    
T  10731691 tctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaataatcccaa--gactcttttattattatt 10731780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 10945460 - 10945549
Alignment:
Q  27 tctaatataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||   || ||||||||||||||    
T  10945460 tctaacataaagttctaggtttaaggtttgatttgagaagggtttgtcaccatgacggaccaataatcccaa--gactcttttattattatt 10945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 11048920 - 11048984
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  11048920 attttcttcgaattaaaaatccaaactttttaacctttgaaactttcatctaatcattattaaaa 11048984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 8561836 - 8561753
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattt 124  Q
    |||||||||||||||  ||| ||||| ||||||||  ||||| |||||||||| ||| ||||| ||||||||||||||| ||||    
T  8561836 taggtttagggtttggattgtgaaggatttgtcaccatgacgaaccaataatctcaaggcacctttttattattattgttattt 8561753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 9192801 - 9192846
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtcac 75  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  9192801 aatataaagtttaggtttagggtttggtttgtgaagggtttgtcac 9192846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 11921972 - 11921907
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||  ||||| ||||||||||||||    
T  11921972 ataaagttataggtttagggtttggtttgtgaagggtttgtcaccatgacgaaccaataatcccaa 11921907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 40560012 - 40559949
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||| ||||||||||||||| |||| |||| ||||||||||||| |||||| |||||||||||||    
T  40560012 atttcctttcaattaaaaatccaaactttt-aacctttgaaactttcatctgatcattattaaaa 40559949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 10731824 - 10731896
Alignment:
Q  107 ttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||||| | ||||||||| ||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  10731824 ttattattattattattttcttttaattaaaaattcaaactttataa--tctcaaactctcatctaatcattatt 10731896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 10945593 - 10945665
Alignment:
Q  107 ttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||||| | ||||||||| ||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  10945593 ttattattattattattttcttttaattaaaaattcaaactttataa--tctcaaactctcatctaatcattatt 10945665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 5676038 - 5676096
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||||||||||||||||| ||||| ||||| ||  ||||| ||||||||| ||||    
T  5676038 tttaggtttagggtttgatttgtgaaggatttgttaccatgacgaaccaataattccaa 5676096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 7197831 - 7197885
Alignment:
Q  63 aagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||||||||  |||||||||||| ||||||| || | ||||||||||||||    
T  7197831 aagggtttgtcaccatgacggaccaatgatcccaaggctctcttttattattatt 7197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 25190753 - 25190828
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||||||||||||| |||| ||||| ||||||||   || | |||||||||||||| |||  |||||||||||||    
T  25190753 tttaggtttagggtttggtttgtgaaggatttgtcaccaagatgaaccaataatcccaaggca--cttttattattat 25190828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 12045 - 11981
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  12045 attttcttttaattaaaaattcaaactttttaacctttgaaactttcatctaatcattattaaaa 11981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 15760162 - 15760290
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttt 150  Q
    ||||| |||| ||||||||||||| | ||||| ||||||||||||||  | || ||||||||||||||| |||||| |||| |||||||| |||| |||     
T  15760162 gtttggtttgtgaagggtttgtcattatgacgaaccaataatcccaagacgcctttttattattattgttattttcattcagttaaaaatccaaacttta 15760261  T
Q  151 taacctttgaaactctcatctaatcattatt 181  Q
    |||  | | ||||||||||||||||||||||    
T  15760262 taa--tctcaaactctcatctaatcattatt 15760290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 33633100 - 33633163
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||| ||||||||||||||| |||| |||| ||||||||||||| |||||| |||||||||||||    
T  33633100 atttcctttcaattaaaaatccaaactttt-aacctttgaaactttcatctgatcattattaaaa 33633163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 25397534 - 25397662
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttt 150  Q
    ||||| |||| |||| |||||||| | |||   |||||||||||||| || || ||||| ||||||||| |||||| ||   ||||||||||||| |||     
T  25397534 gtttggtttgtgaagagtttgtcattatgataaaccaataatcccaaggcgcctttttaatattattgttattttcattatgttaaaaattcaaacttta 25397633  T
Q  151 taacctttgaaactctcatctaatcattatt 181  Q
    |||  | | ||||||||||||||||||||||    
T  25397634 taa--tctcaaactctcatctaatcattatt 25397662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 22285577 - 22285643
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||| ||||||||||||||  |||||||||||| ||||||| || | ||||||||||||||    
T  22285577 gtttggtttgtgaagggtttgtcaccatgacggaccaatgatcccaatgctctcttttattattatt 22285643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 18008665 - 18008730
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| ||||  |||||||||||||  ||| ||||||||||||||||    
T  18008665 ataaagttctaggtttagggtttggtttgcaaagggtttgtcaccatgatggaccaataatcccaa 18008730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 23694436 - 23694488
Alignment:
Q  131 aattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||||| ||||||||  ||||||||||| | ||||||||||||||||||||    
T  23694436 aattaaaaatccaaatttt--aacctttgaaattttcatctaatcattattaaaa 23694488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 14877779 - 14877701
Alignment:
Q  104 cttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||| ||||| | ||||||||| | |||||||| ||| ||||  ||| ||||||||| ||||||||||||||||||||    
T  14877779 cttttatttttatttttattttctttta-ttaaaaatccaactttt--aacttttgaaactttcatctaatcattattaaaa 14877701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 21319970 - 21320052
Alignment:
Q  17 agaaagttgctctaatataaagtt-taggtttag-ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    ||||||| | ||||| |||||||| ||||||||  |||||| |||| ||||||||||||||  ||| ||||||||||||||||    
T  21319970 agaaagtagatctaacataaagttctaggtttaaaggtttggtttgtgaagggtttgtcaccatgatggaccaataatcccaa 21320052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 42418001 - 42417935
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    ||||| |||| |||||||||||||   |||||||||||| ||||||| || | ||||||||||||||    
T  42418001 gtttggtttgtgaagggtttgtcatcatgacggaccaatgatcccaaggctctcttttattattatt 42417935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 18959829 - 18959887
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    |||||| ||||||||||||| |||| ||| ||| |||  ||||||||||||||||||||||    
T  18959829 attttcattcaattaaaaatccaaactttctaatctt--aaactctcatctaatcattatt 18959887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 8332 - 8210
Alignment:
Q  52 tttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaatttttt 151  Q
    |||| |||| |||||||||||| |  ||||||||||||||||||||||| |  ||||||| |||||   ||||||||  |||||||||| |||| |||||    
T  8332 tttggtttgtgaagggtttgtcgccatgacggaccaataatcccaaagctc--ttttatttttatt---attttctt--aattaaaaatccaaacttttt 8240  T
Q  152 aacctttgaaactctcatctaatcattatt 181  Q
    ||||||||||| | ||||||||||||||||    
T  8239 aacctttgaaattttcatctaatcattatt 8210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 20915444 - 20915363
Alignment:
Q  104 cttttattattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||| || || | |||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  20915444 cttttattttttttattattttcttccaattaaaaattcaaactttttaacctttgaaactttcatttaatcattattaaaa 20915363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 25577074 - 25577011
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||| ||||||||||||||| || | |||| ||||||||||||| ||||||||||||||||||||    
T  25577074 atttactttcaattaaaaatccagactttt-aacctttgaaactttcatctaatcattattaaaa 25577011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 34780974 - 34781037
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  34780974 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 34781037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 12411089 - 12411174
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    || | |||||||||||||| || || |||||||||||||    
T  12411089 ataaagttctaggtttagggtttggtttgtgaagggtttgtcatcaagatgaaccaataatcccaaggcgcctttttattattatt 12411174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 16677640 - 16677705
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||  ||||| ||||||||||||||    
T  16677640 ataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaa 16677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 20167697 - 20167624
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattt 124  Q
    ||||| |||| ||||| |||||| |  ||||||||||||||||||||  |||| ||||||||||||||| ||||    
T  20167697 gtttggtttgtgaaggatttgtcgccatgacggaccaataatcccaagacacctttttattattattgttattt 20167624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 20738902 - 20738947
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtcac 75  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||||    
T  20738902 aatataaagtttaggtttagggtttggtttgtgaaggatttgtcac 20738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 21382859 - 21382926
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||| |||| ||||| |||||| |  |||||||||||||||||||| || | ||||||||||||||    
T  21382859 ggtttggtttgtgaaggatttgtcgccatgacggaccaataatcccaaggctctcttttattattatt 21382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 22000024 - 21999945
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    ||||| |||| ||||||||||||||  ||||| |||||| |||| ||  |||| |||||||||||||||| |||||||||    
T  22000024 gtttggtttgtgaagggtttgtcaccatgacgaaccaatgatcctaagacacctcttttattattattgttattttcttt 21999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 20968407 - 20968444
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  20968407 ttttaacctttgaaactttcatctagtcattattaaaa 20968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 23435933 - 23435970
Alignment:
Q  78 tgacggaccaataatcccaaagcacccttttattatta 115  Q
    |||||||||||||||||||| || ||||||||||||||    
T  23435933 tgacggaccaataatcccaaggctcccttttattatta 23435970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 23447300 - 23447337
Alignment:
Q  78 tgacggaccaataatcccaaagcacccttttattatta 115  Q
    |||||||||||||||||||| || ||||||||||||||    
T  23447300 tgacggaccaataatcccaaggctcccttttattatta 23447337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 6234 - 6128
Alignment:
Q  30 aatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 129  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||| ||||| |||||||||||||| || |  || | |||||||||| |||||||||    
T  6234 aatataaagtttaggtttagggtttg-tttgtgaaggaattgtcactatgacgaaccaataatcccaaggcgctattattttattattgttattttcttt 6136  T
Q  130 caattaaa 137  Q
     |||||||    
T  6135 taattaaa 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 17987221 - 17987285
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||| ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||    
T  17987221 attttcttccaattaaaaatccaaactttttaacctttgaaacattcatctaatcattattaaaa 17987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 21240636 - 21240778
Alignment:
Q  39 tttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaa 138  Q
    |||||||||||| |||| |||| |||| ||||||||    || | |||||||||||||| || || ||||||||||||||| |||||| || ||  ||||    
T  21240636 tttaggtttaggatttggtttgtgaagagtttgtcatcaagatgaaccaataatcccaaggcgcctttttattattattgttattttc-ttaaaacaaaa 21240734  T
Q  139 attcaaattttttaacctttgaaactctc-atctaatcattatt 181  Q
    || |||| |||||||||||||||||| || | ||||||||||||    
T  21240735 atccaaactttttaacctttgaaactttcaaactaatcattatt 21240778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 18379659 - 18379595
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||| ||| |||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||    
T  18379659 attttgttttaattaaaaatccaaactttttaatctttgaaactttcatctaatcattattaaaa 18379595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 41228946 - 41229008
Alignment:
Q  122 ttttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| |||| |||||||||||||||    
T  41228946 ttttctttcaattaaaaatccaaactttt-aacctttgaaactttcatttaatcattattaaaa 41229008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 41802853 - 41802973
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaatttt 149  Q
    |||||| |||| ||||| |||||| |  |||||||||||||||||||| || |  ||||||| |||||   ||||||||  ||||||||||  ||| |||    
T  41802853 ggtttggtttgtgaaggatttgtcgccatgacggaccaataatcccaaggctc--ttttatttttatt---attttctt--aattaaaaatcaaaacttt 41802945  T
Q  150 ttaacctttgaaactctcatctaatcat 177  Q
    ||||||||||||||| ||||||||||||    
T  41802946 ttaacctttgaaactttcatctaatcat 41802973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 39286114 - 39286041
Alignment:
Q  57 tttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    |||| ||||| ||||||||  ||||||||||||||||||||  |||| |||||||||||||||| |||||||||    
T  39286114 tttgtgaaggatttgtcaccatgacggaccaataatcccaagacacctcttttattattattgttattttcttt 39286041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 23289423 - 23289364
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||  ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  23289423 attttcttataattaaaaattcaaactttt-aacctttgaaactttcatctaatcattatt 23289364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 17717344 - 17717472
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttctttcaattaaaaattcaaattttt 150  Q
    ||||| |||| ||||| ||||||||  |||||||||||| |||| ||  |||| ||||||||||||||| |||||| ||   |||||||| |||  |||     
T  17717344 gtttggtttgtgaaggatttgtcaccatgacggaccaatgatccaaagacacctttttattattattgttattttcattatgttaaaaatccaaccttta 17717443  T
Q  151 taacctttgaaactctcatctaatcattatt 181  Q
    |||  | | ||||||||||||||||||||||    
T  17717444 taa--tctcaaactctcatctaatcattatt 17717472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 8649471 - 8649545
Alignment:
Q  52 tttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaatttt 125  Q
    |||| |||| ||||||||||||||  |||||||||||| |||||||  |||| |||||||||||||||| |||||    
T  8649471 tttggtttgtgaagggtttgtcaccatgacggaccaatgatcccaagacacctcttttattattattgttatttt 8649545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 49056014 - 49056072
Alignment:
Q  17 agaaagttgctctaatataaagttt-aggtttagggtttgatttgagaagggtttgtca 74  Q
    ||||||| | || |||||||||||| ||||||||||||||||||| |||||||||||||    
T  49056014 agaaagtaggtccaatataaagttttaggtttagggtttgatttgtgaagggtttgtca 49056072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 44538852 - 44538914
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||| |||||||||| ||| ||||  ||||||||||| | ||||||||||||||||||||    
T  44538852 attttcttttaattaaaaatccaactttt--aacctttgaaattttcatctaatcattattaaaa 44538914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 20405365 - 20405428
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||| ||||||    
T  20405365 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattgttaaaa 20405428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 20412893 - 20412962
Alignment:
Q  110 ttattattgtaattttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    |||||||||| ||||||||| |||||||||| |||| || |||| ||   ||||||||||||||||||||||    
T  20412893 ttattattgttattttcttttaattaaaaatccaaacttcttaatctc--aaactctcatctaatcattatt 20412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 28208464 - 28208531
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||| |||||||||| |||||||   ||||| |||||||||| ||| ||||| |||||||||||||    
T  28208464 ggtttggtttgagaaggatttgtcatcatgacgaaccaataatctcaaggcacctttttattattatt 28208531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 20498118 - 20498183
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||| ||||||||  ||| | ||||||||||||||    
T  20498118 ataaagttctaggtttagggtttggtttgtgaaggatttgtcaccatgaagaaccaataatcccaa 20498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 20860222 - 20860157
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||| ||||||||||| |||| ||||| ||||||||| | ||| ||||||||||||||    
T  20860222 ataaagttctagatttagggtttggtttgtgaaggatttgtcactatcacgaaccaataatcccaa 20860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 23299459 - 23299512
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcc 94  Q
    ||||||||||||||| |||| ||||| ||||||||  ||||| |||||||||||    
T  23299459 taggtttagggtttggtttgtgaaggatttgtcaccatgacgaaccaataatcc 23299512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 25404607 - 25404542
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| ||||||||||||||| |||| ||||| ||||| ||  ||||| ||||||||||||||    
T  25404607 ataaagttctaggtttagggtttggtttgtgaaggatttgtaaccatgacgaaccaataatcccaa 25404542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 24684 - 24621
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||||||||||||||| | || |||| ||||||||||||| ||||||||||||||||||||    
T  24684 attttctttcaattaaaaatccgaactttt-aacctttgaaactttcatctaatcattattaaaa 24621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 21121 - 21184
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||||||||||||||||||| |||| |||| ||||||||||||| ||||||||| ||||||||||    
T  21121 attttctttcaattaaaaatccaaactttt-aacctttgaaactttcatctaattattattaaaa 21184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 53461 - 53524
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||| ||||||||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  53461 atttcctttcaattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 53524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 79 - 142
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  79 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 27723 - 27660
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  27723 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 27660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 51192 - 51133
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||| |||||||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  51192 attttcttttaattaaaaatccaaactttt-aacctttgaaactttcatctaatcattatt 51133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 13764 - 13701
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  13764 attttcttataattaaaaatccaaactttt-aacctttgaaactttcatctaatcattattaaaa 13701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 100753 - 100886
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || ||||||||||||||||||| |||||| |||  ||| ||||||||| |  || | |||||||||||||| ||  | ||||||| ||||    
T  100753 agaaagtaggtccaatataaagtttaggtttatggtttggttt-tgaatggtttgtcattaagatgaaccaataatcccaaggc-tctttttatttttat 100850  T
Q  117 tgtaattttctttcaattaaaaattcaaattttttaacc 155  Q
    |   ||||||||| |||||||||| |||| ||| |||||    
T  100851 t---attttcttttaattaaaaatccaaactttataacc 100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 8340 - 8261
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    ||||| |||| ||||||||||||||  |||| ||||||| |||||||  |||| |||||||||||||||| |||||||||    
T  8340 gtttggtttgtgaagggtttgtcaccatgacagaccaatgatcccaagacacctcttttattattattgttattttcttt 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 23853 - 23932
Alignment:
Q  51 gtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacc-cttttattattattgtaattttcttt 129  Q
    ||||| |||| ||||||||||||||  ||||||||||||  ||||||  |||| |||||||||||||||| |||||||||    
T  23853 gtttggtttgtgaagggtttgtcaccatgacggaccaatggtcccaagacacctcttttattattattgttattttcttt 23932  T

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Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 18331 - 18294
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  18331 ttttaacctttgaaactttcatctaatcattattaaaa 18294  T

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Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 43335 - 43372
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43335 ttttaacctttgaaactttcatctaatcattattaaaa 43372  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 521313 - 521381
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagc 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||   || | |||||||||||||||||    
T  521313 ataaagttataggtttagggtttggtttgtgaagggtttgtcaccaagatgaaccaataatcccaaagc 521381  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 182118 - 182055
Alignment:
Q  121 attttctttcaattaaaaattcaaattttttaacctttgaaactctcatctaatcattattaaaa 185  Q
    |||| ||||||||||||||| |||| |||| || |||||||||| |||| || ||||||||||||    
T  182118 atttcctttcaattaaaaatccaaactttt-aatctttgaaactttcatatattcattattaaaa 182055  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 43817 - 43743
Alignment:
Q  50 ggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattt 124  Q
    |||||| |||| ||||| ||||||||  ||| | ||||||||||||||  |||| ||||||||||||||| ||||    
T  43817 ggtttggtttgtgaaggatttgtcaccatgatgaaccaataatcccaagacacctttttattattattgttattt 43743  T

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Target: scaffold0443 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 3990 - 3905
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattatt 117  Q
    |||||||| ||||||||||||||| |||  |||||||||||||  | || | |||||||||||||| || |  |||||||||||||    
T  3990 ataaagttctaggtttagggtttggtttatgaagggtttgtcatctagatgaaccaataatcccaatgcgcttttttattattatt 3905  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 8763 - 8655
Alignment:
Q  17 agaaagttgctctaatataaagtttaggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattat 116  Q
    ||||||| | || ||||||||||||||||||||| |||| |||  ||||||||||||| |  || | |||||||||||||| || |  || | |||||||    
T  8763 agaaagtaggtccaatataaagtttaggtttaggatttg-tttttgaagggtttgtcattaagatgaaccaataatcccaaggcgcttttattttattat 8665  T
Q  117 tgtaattttc 126  Q
    ||| ||||||    
T  8664 tgttattttc 8655  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 15940 - 15973
Alignment:
Q  148 ttttaacctttgaaactctcatctaatcattatt 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  15940 ttttaacctttgaaactttcatctaatcattatt 15973  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 14644 - 14709
Alignment:
Q  33 ataaagtt-taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaa 97  Q
    |||||||| |||||||||| |||| |||| ||||| ||||||||  ||||| ||||||||||||||    
T  14644 ataaagttctaggtttaggatttggtttgtgaaggatttgtcaccatgacgaaccaataatcccaa 14709  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 22255 - 22169
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 129  Q
    ||||||||||||||   ||| ||||| ||||||||  ||||| |||||||||||||| |  | ||||||| |||||||| |||||||||    
T  22255 taggtttagggttttgcttgtgaaggatttgtcaccatgacgaaccaataatcccaagg--ctcttttataattattgttattttcttt 22169  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 31687 - 31773
Alignment:
Q  41 taggtttagggtttgatttgagaagggtttgtcactttgacggaccaataatcccaaagcacccttttattattattgtaattttcttt 129  Q
    ||||||||| |||||||||| ||||| ||||| |   ||||| ||||||||||||||   || |||||||| ||||||| |||||||||    
T  31687 taggtttagagtttgatttgtgaaggatttgttatcatgacgaaccaataatcccaa--gacacttttattgttattgttattttcttt 31773  T

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