View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9533A_low_187 (Length: 238)

Name: NF9533A_low_187
Description: NF9533A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9533A_low_187
NF9533A_low_187
[»] chr2 (51 HSPs)
chr2 (1-116)||(41569469-41569585)
chr2 (141-237)||(18176996-18177092)
chr2 (141-231)||(41569321-41569411)
chr2 (143-215)||(37257508-37257580)
chr2 (141-237)||(433906-434002)
chr2 (141-231)||(4952405-4952495)
chr2 (141-231)||(42223877-42223967)
chr2 (155-231)||(7552625-7552703)
chr2 (141-231)||(29051580-29051668)
chr2 (141-215)||(42678805-42678880)
chr2 (141-236)||(26738801-26738895)
chr2 (141-231)||(4758564-4758654)
chr2 (162-237)||(670391-670466)
chr2 (141-215)||(6999009-6999083)
chr2 (141-215)||(39213711-39213785)
chr2 (162-231)||(5027233-5027302)
chr2 (154-219)||(20911870-20911935)
chr2 (2-55)||(41588523-41588576)
chr2 (141-225)||(7574491-7574575)
chr2 (141-225)||(10711780-10711864)
chr2 (141-237)||(31389603-31389699)
chr2 (151-215)||(32869892-32869956)
chr2 (141-215)||(6170686-6170760)
chr2 (141-215)||(28245784-28245857)
chr2 (155-237)||(28679387-28679468)
chr2 (141-215)||(29712034-29712108)
chr2 (141-215)||(40937005-40937079)
chr2 (180-237)||(17779477-17779534)
chr2 (141-178)||(36802952-36802989)
chr2 (141-226)||(44711919-44712004)
chr2 (155-215)||(2131497-2131557)
chr2 (153-237)||(5200145-5200228)
chr2 (151-226)||(28244171-28244245)
chr2 (141-227)||(42866806-42866892)
chr2 (141-215)||(2221049-2221123)
chr2 (141-215)||(9634377-9634451)
chr2 (141-215)||(25881600-25881674)
chr2 (141-175)||(34119633-34119667)
chr2 (141-215)||(35589328-35589402)
chr2 (141-215)||(35705550-35705623)
chr2 (141-175)||(38560734-38560768)
chr2 (141-197)||(10472106-10472163)
chr2 (154-215)||(18876862-18876923)
chr2 (142-175)||(26277152-26277185)
chr2 (142-231)||(29879899-29879988)
chr2 (141-197)||(42532697-42532754)
chr2 (151-231)||(2464175-2464254)
chr2 (141-185)||(4139278-4139322)
chr2 (141-237)||(5054664-5054760)
chr2 (153-205)||(6941011-6941063)
chr2 (141-185)||(13347786-13347830)
[»] chr5 (41 HSPs)
chr5 (141-231)||(5042304-5042394)
chr5 (151-231)||(2688911-2688991)
chr5 (141-237)||(35098924-35099020)
chr5 (141-219)||(18842258-18842336)
chr5 (141-237)||(4430855-4430951)
chr5 (141-225)||(6930990-6931074)
chr5 (141-237)||(8267739-8267835)
chr5 (141-231)||(16437489-16437580)
chr5 (151-237)||(33620674-33620760)
chr5 (141-237)||(37700516-37700611)
chr5 (141-231)||(5821536-5821627)
chr5 (141-237)||(21064145-21064241)
chr5 (154-237)||(23126260-23126342)
chr5 (155-237)||(39088788-39088869)
chr5 (141-215)||(43441794-43441868)
chr5 (141-215)||(9581635-9581709)
chr5 (141-215)||(19839927-19840001)
chr5 (141-226)||(20770187-20770272)
chr5 (151-215)||(15267850-15267914)
chr5 (141-225)||(18397096-18397180)
chr5 (141-237)||(2224846-2224943)
chr5 (141-215)||(8675374-8675448)
chr5 (141-226)||(189633-189718)
chr5 (141-226)||(19481112-19481197)
chr5 (141-237)||(3640116-3640212)
chr5 (141-237)||(15952964-15953060)
chr5 (141-237)||(41175625-41175721)
chr5 (141-208)||(6517768-6517835)
chr5 (192-231)||(9977212-9977251)
chr5 (152-215)||(41724256-41724319)
chr5 (141-215)||(1839286-1839360)
chr5 (142-176)||(6292178-6292212)
chr5 (141-227)||(9226357-9226442)
chr5 (141-215)||(10649491-10649565)
chr5 (141-215)||(15478714-15478788)
chr5 (141-175)||(21136319-21136353)
chr5 (141-215)||(34124677-34124751)
chr5 (141-215)||(38704138-38704212)
chr5 (141-231)||(39628845-39628935)
chr5 (141-175)||(43196606-43196640)
chr5 (141-225)||(43213990-43214074)
[»] chr8 (39 HSPs)
chr8 (141-237)||(11017861-11017957)
chr8 (141-231)||(45529171-45529261)
chr8 (141-237)||(1633809-1633905)
chr8 (141-237)||(7955926-7956022)
chr8 (141-231)||(16966841-16966931)
chr8 (141-237)||(11657920-11658015)
chr8 (141-237)||(36110194-36110290)
chr8 (155-237)||(32843861-32843943)
chr8 (141-237)||(7478836-7478931)
chr8 (141-229)||(30135942-30136030)
chr8 (141-237)||(35564345-35564441)
chr8 (141-219)||(40739850-40739927)
chr8 (141-237)||(7586082-7586177)
chr8 (141-237)||(37783890-37783986)
chr8 (142-231)||(32847611-32847701)
chr8 (141-215)||(41159830-41159904)
chr8 (141-219)||(41521024-41521102)
chr8 (141-237)||(7592905-7593002)
chr8 (141-237)||(1871534-1871629)
chr8 (141-237)||(33589150-33589245)
chr8 (161-237)||(34591340-34591416)
chr8 (141-231)||(36531651-36531740)
chr8 (141-198)||(38234063-38234120)
chr8 (155-219)||(8645234-8645298)
chr8 (143-214)||(13971182-13971253)
chr8 (141-227)||(2733044-2733129)
chr8 (141-215)||(30439447-30439521)
chr8 (141-225)||(16327082-16327167)
chr8 (141-226)||(31597004-31597089)
chr8 (141-185)||(36568014-36568058)
chr8 (141-196)||(4994437-4994492)
chr8 (142-237)||(42110102-42110196)
chr8 (156-237)||(888175-888257)
chr8 (141-175)||(9549180-9549214)
chr8 (141-175)||(16613690-16613724)
chr8 (141-215)||(16872097-16872171)
chr8 (141-175)||(34718171-34718205)
chr8 (159-228)||(39543451-39543520)
chr8 (141-185)||(6991779-6991823)
[»] chr7 (48 HSPs)
chr7 (141-237)||(29162895-29162991)
chr7 (141-237)||(19785998-19786094)
chr7 (141-237)||(32815224-32815320)
chr7 (141-237)||(13162975-13163071)
chr7 (141-237)||(37808683-37808779)
chr7 (141-237)||(38779663-38779759)
chr7 (141-237)||(39231647-39231743)
chr7 (141-219)||(40353320-40353398)
chr7 (154-231)||(13906382-13906459)
chr7 (142-219)||(39332042-39332119)
chr7 (141-231)||(21023042-21023132)
chr7 (154-237)||(41402577-41402660)
chr7 (141-231)||(41666847-41666937)
chr7 (141-238)||(47078170-47078266)
chr7 (141-215)||(13729782-13729856)
chr7 (142-215)||(28036801-28036874)
chr7 (146-231)||(29002669-29002752)
chr7 (146-226)||(35588821-35588901)
chr7 (141-215)||(44184500-44184574)
chr7 (141-226)||(10055562-10055647)
chr7 (142-231)||(39137209-39137298)
chr7 (183-231)||(27163585-27163633)
chr7 (159-227)||(41026132-41026199)
chr7 (146-237)||(4713634-4713725)
chr7 (141-215)||(18111552-18111627)
chr7 (141-215)||(39029914-39029989)
chr7 (141-175)||(20482583-20482617)
chr7 (141-215)||(21822540-21822614)
chr7 (155-237)||(26041239-26041320)
chr7 (141-215)||(43573484-43573558)
chr7 (180-237)||(46773583-46773640)
chr7 (142-226)||(16980354-16980437)
chr7 (151-215)||(25067289-25067353)
chr7 (153-228)||(3293197-3293272)
chr7 (141-215)||(11352915-11352989)
chr7 (141-175)||(11564949-11564983)
chr7 (141-175)||(21559854-21559888)
chr7 (142-228)||(31844533-31844619)
chr7 (141-175)||(33180691-33180725)
chr7 (141-215)||(35452514-35452588)
chr7 (141-175)||(40231687-40231721)
chr7 (141-175)||(46532558-46532592)
chr7 (141-175)||(47495026-47495060)
chr7 (142-215)||(3062387-3062460)
chr7 (146-215)||(12645851-12645920)
chr7 (141-238)||(36019473-36019569)
chr7 (141-237)||(23048319-23048414)
chr7 (144-236)||(39823868-39823959)
[»] chr4 (49 HSPs)
chr4 (141-237)||(41486062-41486158)
chr4 (141-237)||(36111314-36111411)
chr4 (142-237)||(51746277-51746372)
chr4 (141-231)||(6141703-6141793)
chr4 (141-231)||(21260354-21260444)
chr4 (141-231)||(30079902-30079992)
chr4 (142-231)||(42959328-42959418)
chr4 (141-237)||(33899245-33899341)
chr4 (141-237)||(624230-624327)
chr4 (141-237)||(5932077-5932172)
chr4 (141-237)||(9118783-9118879)
chr4 (141-237)||(14451449-14451545)
chr4 (141-237)||(51194325-51194421)
chr4 (151-237)||(12112693-12112779)
chr4 (141-231)||(25317991-25318080)
chr4 (141-237)||(31076110-31076205)
chr4 (141-236)||(41082374-41082468)
chr4 (166-237)||(50272992-50273063)
chr4 (141-231)||(439185-439275)
chr4 (151-237)||(53152240-53152326)
chr4 (141-226)||(39344910-39344995)
chr4 (141-237)||(47965795-47965889)
chr4 (141-237)||(26206896-26206992)
chr4 (155-231)||(35820241-35820317)
chr4 (154-237)||(17475946-17476028)
chr4 (141-215)||(2999168-2999242)
chr4 (141-237)||(37066044-37066139)
chr4 (141-215)||(28657382-28657456)
chr4 (141-226)||(26718424-26718509)
chr4 (141-226)||(26731052-26731137)
chr4 (141-226)||(28458307-28458392)
chr4 (141-206)||(30169970-30170035)
chr4 (141-237)||(54669503-54669598)
chr4 (155-231)||(48536366-48536444)
chr4 (141-215)||(14010059-14010133)
chr4 (141-215)||(46405915-46405989)
chr4 (141-215)||(49896607-49896681)
chr4 (142-175)||(13263378-13263411)
chr4 (143-215)||(27326693-27326765)
chr4 (151-237)||(23822167-23822250)
chr4 (141-215)||(13086078-13086152)
chr4 (141-175)||(21617239-21617273)
chr4 (141-215)||(22819705-22819779)
chr4 (141-215)||(31657702-31657776)
chr4 (151-231)||(43326268-43326350)
chr4 (141-219)||(48335610-48335688)
chr4 (141-211)||(51573577-51573647)
chr4 (141-226)||(13139204-13139289)
chr4 (153-237)||(2256250-2256333)
[»] chr3 (49 HSPs)
chr3 (141-237)||(390865-390961)
chr3 (141-237)||(37508417-37508513)
chr3 (141-237)||(44677403-44677499)
chr3 (141-237)||(10206892-10206988)
chr3 (141-237)||(28419133-28419229)
chr3 (141-229)||(39020086-39020174)
chr3 (141-231)||(49363176-49363266)
chr3 (141-237)||(32767732-32767828)
chr3 (146-237)||(30909090-30909181)
chr3 (141-231)||(11633669-11633759)
chr3 (141-231)||(22371247-22371337)
chr3 (141-215)||(33375916-33375990)
chr3 (141-231)||(43905029-43905119)
chr3 (141-237)||(39671016-39671112)
chr3 (142-237)||(36121878-36121973)
chr3 (154-237)||(54773672-54773755)
chr3 (141-215)||(8821686-8821760)
chr3 (151-231)||(29633997-29634077)
chr3 (141-237)||(54027998-54028094)
chr3 (142-237)||(54195396-54195492)
chr3 (141-231)||(46982828-46982918)
chr3 (141-215)||(49417631-49417704)
chr3 (162-231)||(55013079-55013148)
chr3 (141-215)||(39697163-39697237)
chr3 (141-215)||(52937239-52937313)
chr3 (141-215)||(55400055-55400129)
chr3 (141-206)||(46984582-46984647)
chr3 (141-228)||(39907474-39907561)
chr3 (141-215)||(21196180-21196254)
chr3 (141-215)||(24095347-24095421)
chr3 (141-215)||(37927146-37927220)
chr3 (141-215)||(46253678-46253752)
chr3 (141-227)||(49761363-49761449)
chr3 (141-231)||(51973293-51973383)
chr3 (141-226)||(3953405-3953490)
chr3 (144-225)||(24480382-24480463)
chr3 (141-198)||(50638309-50638366)
chr3 (141-231)||(26996372-26996461)
chr3 (141-187)||(37035494-37035541)
chr3 (141-215)||(24645412-24645486)
chr3 (141-215)||(46019518-46019592)
chr3 (141-215)||(50206911-50206985)
chr3 (141-215)||(51465855-51465929)
chr3 (141-214)||(24482905-24482978)
chr3 (164-237)||(35201459-35201531)
chr3 (141-197)||(52485528-52485585)
chr3 (151-215)||(13934544-13934607)
chr3 (155-231)||(21195816-21195891)
chr3 (141-196)||(23770705-23770758)
[»] chr1 (56 HSPs)
chr1 (141-231)||(46082046-46082136)
chr1 (141-237)||(756912-757008)
chr1 (141-237)||(1852870-1852966)
chr1 (141-237)||(3024669-3024765)
chr1 (141-237)||(3603167-3603263)
chr1 (141-237)||(8411637-8411733)
chr1 (141-237)||(9008281-9008377)
chr1 (141-237)||(20565037-20565133)
chr1 (141-237)||(33024490-33024586)
chr1 (141-231)||(902694-902784)
chr1 (141-231)||(38303613-38303703)
chr1 (141-237)||(4514373-4514469)
chr1 (141-237)||(7128174-7128270)
chr1 (141-237)||(26837508-26837604)
chr1 (141-237)||(34008236-34008331)
chr1 (142-237)||(26585798-26585893)
chr1 (141-231)||(36779194-36779284)
chr1 (141-231)||(46172332-46172422)
chr1 (141-237)||(51191844-51191940)
chr1 (141-237)||(16986994-16987089)
chr1 (141-237)||(21340578-21340673)
chr1 (141-205)||(21486268-21486332)
chr1 (141-237)||(47214264-47214359)
chr1 (141-237)||(51286287-51286382)
chr1 (141-231)||(36673657-36673746)
chr1 (141-226)||(50781500-50781585)
chr1 (141-237)||(1790564-1790660)
chr1 (141-215)||(13489718-13489792)
chr1 (141-215)||(32319251-32319324)
chr1 (141-215)||(50328082-50328156)
chr1 (141-215)||(50824797-50824871)
chr1 (141-215)||(52362538-52362612)
chr1 (141-237)||(41507113-41507210)
chr1 (141-189)||(29586049-29586097)
chr1 (141-225)||(32915003-32915087)
chr1 (151-238)||(24673132-24673218)
chr1 (141-215)||(40316885-40316959)
chr1 (141-178)||(34040478-34040515)
chr1 (141-226)||(34254281-34254366)
chr1 (151-227)||(50882039-50882115)
chr1 (141-228)||(19969490-19969577)
chr1 (142-197)||(48624933-48624988)
chr1 (143-185)||(3226031-3226073)
chr1 (151-237)||(4469347-4469433)
chr1 (141-215)||(10889987-10890061)
chr1 (141-215)||(15015454-15015528)
chr1 (141-227)||(33125254-33125340)
chr1 (151-237)||(38713636-38713722)
chr1 (141-175)||(44632584-44632618)
chr1 (141-175)||(48220125-48220159)
chr1 (141-215)||(52714842-52714916)
chr1 (142-215)||(25259140-25259213)
chr1 (141-174)||(33054070-33054103)
chr1 (141-226)||(46543373-46543457)
chr1 (141-185)||(8200131-8200175)
chr1 (151-227)||(35539202-35539278)
[»] scaffold0471 (1 HSPs)
scaffold0471 (141-237)||(63-159)
[»] chr6 (24 HSPs)
chr6 (141-237)||(2075370-2075466)
chr6 (141-237)||(3610880-3610976)
chr6 (141-237)||(34504076-34504172)
chr6 (154-237)||(14986663-14986746)
chr6 (141-231)||(2777242-2777331)
chr6 (141-215)||(11547470-11547544)
chr6 (153-237)||(30036713-30036797)
chr6 (154-237)||(5327510-5327593)
chr6 (141-237)||(335119-335213)
chr6 (141-219)||(4820307-4820387)
chr6 (141-231)||(30152455-30152545)
chr6 (142-227)||(14693181-14693266)
chr6 (141-226)||(35213491-35213576)
chr6 (141-215)||(754379-754453)
chr6 (141-231)||(13658888-13658977)
chr6 (141-237)||(22341094-22341189)
chr6 (141-231)||(3199016-3199105)
chr6 (141-215)||(14699605-14699679)
chr6 (154-215)||(32459457-32459518)
chr6 (141-176)||(6531163-6531198)
chr6 (141-215)||(13143323-13143397)
chr6 (141-199)||(20822825-20822883)
chr6 (141-175)||(32046754-32046788)
chr6 (155-215)||(1369430-1369490)
[»] scaffold0449 (1 HSPs)
scaffold0449 (142-237)||(9260-9355)
[»] scaffold0014 (1 HSPs)
scaffold0014 (141-228)||(122887-122973)
[»] scaffold0687 (1 HSPs)
scaffold0687 (141-237)||(2253-2350)
[»] scaffold0136 (1 HSPs)
scaffold0136 (141-226)||(38481-38566)
[»] scaffold0321 (1 HSPs)
scaffold0321 (141-219)||(19692-19770)
[»] scaffold0532 (1 HSPs)
scaffold0532 (141-237)||(11020-11116)
[»] scaffold0010 (1 HSPs)
scaffold0010 (141-214)||(134245-134318)
[»] scaffold1956 (1 HSPs)
scaffold1956 (141-215)||(825-900)
[»] scaffold0416 (1 HSPs)
scaffold0416 (141-187)||(6914-6960)
[»] scaffold0204 (1 HSPs)
scaffold0204 (141-219)||(23132-23210)


Alignment Details
Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41569585 - 41569469
Alignment:
Q  1 gaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactacccttgatggtgatttttacacgtcaaaattaacaatgaat 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  41569585 gaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaat 41569486  T
Q  100 ttaattaaggtccattt 116  Q
    |||||||||||||||||    
T  41569485 ttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 18176996 - 18177092
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||| ||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgt 18177092  T

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Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 41569411 - 41569321
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||  ||||||||||    
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaata 41569321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 37257508 - 37257580
Alignment:
Q  143 tactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgtaaa 37257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 433906 - 434002
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 434002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 4952495 - 4952405
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||||||||| | |||||||||||||||||||| || |||||||    
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaata 4952405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 42223967 - 42223877
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| |||||| ||||||| ||||||  | |||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgttaaata 42223877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 7552625 - 7552703
Alignment:
Q  155 tttttactttatctctctattactctggt--ttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| ||||||||||||||||| ||||  |||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaaata 7552703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 29051668 - 29051580
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| || ||||||||||||||  ||||||||| || |||||||| ||||||||||||||||||||||||||| |||  ||||||||||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 29051580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 42678805 - 42678880
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatacc-acttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||| |||||| |||||||||||||||||    
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaa 42678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 26738895 - 26738801
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttg 236  Q
    |||||| || |||||||||| |||||||||||||| || |||||||  ||||||||  || |||||||||||||||||| ||||||||||| ||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaaataagttg 26738801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 4758654 - 4758564
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| |||| |||||||||| |||||||||||||| || || ||||| |||||||| ||||||||||||| |||| ||| ||| |||||||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaaata 4758564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 670466 - 670391
Alignment:
Q  162 tttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||| || || ||||| || |||||||| |||||||||||||||||||  |||||||||| |||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaataagttgt 670391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 6999083 - 6999009
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||||||| ||||    
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 6999009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 39213785 - 39213711
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| | ||| |||||||  ||||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaaa 39213711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 5027233 - 5027302
Alignment:
Q  162 tttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||||||||| || |||||| | ||||||||| | |||||||||||||||||||| || |||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaata 5027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||||||||||||||||||||| || |||||||| ||| |||| |  |||||||||||||||||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  2 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 55  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 7574491 - 7574575
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| | ||| ||||||  ||||||| ||||||| |||| ||||    
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgt 7574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 10711780 - 10711864
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||  ||||||  ||||||||||||||| ||| |||||    
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgt 10711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 31389603 - 31389699
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||| ||||||| || |||||  | |||||||| || |||||| ||||||||||||||||  |||  |||||||||| |||||    
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaagttatggttgtcaaataagttgt 31389699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 32869892 - 32869956
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||| |||| || |||||| | ||| ||||||| |||||||||||||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaa 32869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 6170686 - 6170760
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||| ||| ||||    
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaattttttttttataaa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 28245784 - 28245857
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| | ||| ||||||   ||||||||||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacc-tatttttctttgtaaa 28245857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 28679387 - 28679468
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||| || || |||||||| |||||| || ||||||||| |||| |||  |||||||||| |||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactac-tttttctttataaattatggttgtcaaataagttgt 28679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 29712034 - 29712108
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||  |||| ||||||   ||||||||||||||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaa 29712108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 40937079 - 40937005
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| | ||| ||||||   ||||||||||||||    
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaa 40937005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17779477 - 17779534
Alignment:
Q  180 tggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  17779477 tggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 17779534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  141 catactcactttattttttactttatctctctattact 178  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 44712004 - 44711919
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    |||||||||  |||||||||||||||||||||||| || || ||| | ||| ||||||  || ||||||| |||| ||||||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 2131497 - 2131557
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||||| | ||||||||||| |||||||  || ||| ||||||||    
T  2131497 tttttactttatctctctattattttggtttccatgtcaatacctattatttttttgtaaa 2131557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 5200228 - 5200145
Alignment:
Q  153 attttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||||| | |||| || || ||||| ||||||||| || |||||||||||||| |||  |||||||||| |||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttgt 5200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 28244245 - 28244171
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||||||||||||||||||| || || ||| | || |||||||  ||||||||||| ||| ||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 42866806 - 42866892
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaata-ccacttttttctttgtaaaatataattgtca 227  Q
    ||||||||| ||||||||||||||||||||||||| || || | | | ||| |||| |||| |||||||||||||| ||| |||||||    
T  42866806 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccac-tttttctttgtaaattatgattgtca 42866892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 2221049 - 2221123
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||| ||| ||||||   ||||||||| ||||    
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttataaa 2221123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 9634451 - 9634377
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| | ||| |||||||  ||||||||||||||    
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaa 9634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 25881600 - 25881674
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||||||||| || || |||||| | |   ||||||  |||||||||||||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaaa 25881674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 34119667 - 34119633
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  34119667 catactcacattattttttactttatctctctatt 34119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 35589402 - 35589328
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | ||| |||| ||  ||||||||||||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 35589328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 35705550 - 35705623
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||| ||||||||||||||| |||| || |||||| | || |||||| || ||||||||||||||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaaa 35705623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 10472163 - 10472106
Alignment:
Q  141 catactcactttat-tttttactttatctctctattactctggtttccatgccaatac 197  Q
    ||||||||| |||| |||||||||| ||||||||||||| || ||| |||||||||||    
T  10472163 catactcacattatatttttactttctctctctattactttgtttttcatgccaatac 10472106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 18876923 - 18876862
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||||| || |||||||| ||| ||||||   ||||||||| ||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaa 18876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 26277152 - 26277185
Alignment:
Q  142 atactcactttattttttactttatctctctatt 175  Q
    |||||||| |||||||||||||||||||||||||    
T  26277152 atactcacattattttttactttatctctctatt 26277185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 29879899 - 29879988
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||| |||||||| ||||||||||||||||  | |||||| | || |||||| ||||||| |||| |||  |||  ||||||||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttcctttataagttatggttgtcaaata 29879988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  141 catactcactttat-tttttactttatctctctattactctggtttccatgccaatac 197  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | |||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 2464254 - 2464175
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||| |||||||||||||||| || | |||||| || |||||| || |||||||||||||  |||  ||||||||||    
T  2464254 ttatttttaactttatctctctattgctat-gtttccgtgtcaatactacctttttctttgtaagttatggttgtcaaata 2464175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 4139322 - 4139278
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||||| ||| ||||||| |||||||||||||||| ||||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttt 4139278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 5054664 - 5054760
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| | ||| ||||||   |||||||||||||| |||  |||||| ||| |||||    
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattattgttgtcacataagttgt 5054760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 6941011 - 6941063
Alignment:
Q  153 attttttactttatctctctattactctggtttccatgccaataccacttttt 205  Q
    |||||||||||||||||| ||||  | |||||||| ||||||||| |||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactacttttt 6941063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 13347830 - 13347786
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||    
T  13347830 catactcacattactttttactttatctctctattgctttggttt 13347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 5042304 - 5042394
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 5042394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 2688991 - 2688911
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaata 2688911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 35099020 - 35098924
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || | |||||| || |||||||||||||||||||||||| ||| ||||||||||| |||||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaataagttgt 35098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 18842336 - 18842258
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||||||||||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 4430951 - 4430855
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| | ||||||||||||||||||||||| || |||||| | || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaataagttgt 4430855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 6931074 - 6930990
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    ||||||||| ||||||||||||||||||||||||| || || ||||| || |||||||||||||||||| ||||||||| |||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgt 6930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 8267835 - 8267739
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||||| || ||||||||||||||||||||||||  || ||||||||||| |||||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaataagttgt 8267739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 16437580 - 16437489
Alignment:
Q  141 catactcactttatttttt-actttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||||| || |||||||||||||  | |||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaata 16437489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 33620674 - 33620760
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||| |||  |||| ||||| |||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgttaaataagttgt 33620760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 37700516 - 37700611
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||| ||||||||||||| || |||||||| ||||||||| || |||||||||||||| |||  |||||||||| |||||    
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataggttgt 37700611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 5821627 - 5821536
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccactt-ttttctttgtaaaatataattgtcaaata 231  Q
    |||||| || ||||||||||||||||||||||||  || |||||||| |||||||||||||| ||||||||||||| ||| ||| |||||||    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaaata 5821536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 21064241 - 21064145
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||| |||||  | || ||||| || ||||||||||||||||||||||||||||   ||||||||| |||||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatatgggtgtcaaataagttgt 21064145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 23126342 - 23126260
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| |||||||||||||  | |||||||| |||||| | |||||||||||||||||| ||||||||||||||| |||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaaataagttgt 23126260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 39088869 - 39088788
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||||||||||  | ||||||||||| |||||||  |||||||||||||||||||  |||||||||| |||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacc-tttttttctttgtaaaatatcgttgtcaaataagttgt 39088788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 43441794 - 43441868
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||||||||||||    
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaa 43441868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 9581635 - 9581709
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||| ||| ||||||   ||||||||||||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaaa 9581709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 19840001 - 19839927
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| | ||| |||| || |||||||||||||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 19839927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 20770187 - 20770272
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| | || |||||||   |||||||||||||| ||| ||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 20770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 15267850 - 15267914
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||||||||  | |||||| | || ||||| ||||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaaa 15267914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 18397180 - 18397096
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| | ||| ||||||  ||||||||||||||| |||||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 2224846 - 2224943
Alignment:
Q  141 catactcactttattttt--tactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| || ||||||||  |||||||||||| ||||||| || ||||| ||||||||| || |||||||||||||| |||  |||||||||| |||||    
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttgt 2224943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 8675448 - 8675374
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | ||| |||||||  ||||||||||||||    
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 8675374  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 189718 - 189633
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||| ||  ||||||||| |||| ||| ||||||    
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtc 189633  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 19481197 - 19481112
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | | ||| |||||||  |||||||||||||| |||| |||||    
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtc 19481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 3640212 - 3640116
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||| |||||| || || ||| ||||| ||||||   ||||||||| |||| |||  |||||| ||| |||||    
T  3640212 catactcacattattttttactttatctttctattgctttgattttcatgcaaatacccactttttctttataaattatggttgtcacataagttgt 3640116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 15953060 - 15952964
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| | ||| ||||||   |||||||||||||| |||  |||||| ||| |||||    
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgt 15952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 41175721 - 41175625
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || || | | | ||| ||||||   |||||||||||||| |||  |||||| ||| |||||    
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgt 41175625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 6517768 - 6517835
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttct 208  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  |||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 9977212 - 9977251
Alignment:
Q  192 caataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  9977212 caatactacttttttctttgtaaaatatagttgtcaaata 9977251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 41724256 - 41724319
Alignment:
Q  152 tattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||||||||| ||||||||| | |||||||| ||  ||||||  |||||||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaaa 41724319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 1839360 - 1839286
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| | ||| |||| |  |||||||||||||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaaa 1839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  142 atactcactttattttttactttatctctctatta 176  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 9226357 - 9226442
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    ||||||||| |||||||| ||||||||||||||||  | || ||||| ||| |||||    |||||||||||||| |||||||||||    
T  9226357 catactcacattattttt-actttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtca 9226442  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 10649491 - 10649565
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | |||  ||||||  ||||||||||||||    
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10649565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 15478714 - 15478788
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| | ||| |||| ||  ||||||||||||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaa 15478788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 34124677 - 34124751
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| | ||  |||||||  ||||||||||||||    
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaa 34124751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 38704212 - 38704138
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| | ||| |||||||  ||||||||||||||    
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaa 38704138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 39628845 - 39628935
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| |||| |||||||| ||||||||| ||||||  | ||||||   ||||||||| | |||||||||| |||| ||| |||||||||||    
T  39628845 catattcacattatttttaactttatctttctattgttatggtttttgtgccaatactatttttttctttataaattatgattgtcaaata 39628935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 43196640 - 43196606
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  43196640 catactcacattattttttactttatctctctatt 43196606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 43214074 - 43213990
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| | ||| ||||||  |||||||||| |||| |||| ||||    
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgt 43213990  T

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Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 11017861 - 11017957
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttgt 11017957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 45529261 - 45529171
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 45529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 1633905 - 1633809
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 1633809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 7956022 - 7955926
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||  |||||||||| |||||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 7955926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 16966841 - 16966931
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||  ||||||||||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 16966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 11658015 - 11657920
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||| ||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaaataagttgt 11657920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 36110194 - 36110290
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 36110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 32843943 - 32843861
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 32843861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 7478836 - 7478931
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||| ||||||||||||| || |||||||| ||||||||| || |||||||||||||| ||| ||||||||||| |||||    
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaaataggttgt 7478931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 30136030 - 30135942
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaa 229  Q
    |||| |||| ||| |||||||||||||||| ||||||| |||||||| || ||||||||||| ||||||||||||||||  ||||||||    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaaa 30135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 35564345 - 35564441
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||| |||||| || |  ||||  ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 35564441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 40739927 - 40739850
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||| |||| |||||||||||||||||||||||||  | |||||||| ||||||||||| |||||||||||||||||||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgtaaaatat 40739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 7586177 - 7586082
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | || ||||| ||||||| | || |||||||||||||| |||| |||||||||| |||||    
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaaattatagttgtcaaataagttgt 7586082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 37783986 - 37783890
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  ||| ||||||||||||||||||||| ||  | ||||| || ||||||||| ||||||||||||||||||  |||||||||| |||||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaataagttgt 37783890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 32847701 - 32847611
Alignment:
Q  142 atactcactttatttttt-actttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||| ||||||||| ||||||| ||||||||  | |||||||| || |||||||||||||||||||||||| |||  ||||||||||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaata 32847611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 41159904 - 41159830
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| | ||| ||||||  |||||||||||||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 41159830  T

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Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 41521024 - 41521102
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    ||||||||| |||||||||||||||||||  |||| || |||||||  || |||||||||| |||||||||||||||||    
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatat 41521102  T

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Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 7592905 - 7593002
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccactt-ttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| ||||||||||||||||||||||||| || |||||||| || |||||||| || |||| ||| |||| ||| ||||||||||| |||||    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgt 7593002  T

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Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 1871629 - 1871534
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||| ||||||||||||||||  | |||||||| ||| ||||| || |||||||||||||| |||  |||||||||| |||||    
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaaattatggttgtcaaataagttgt 1871534  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 33589245 - 33589150
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||||| |||||||| || |||||| |||||||| ||  ||||||||||| |||||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaatatca-ttttttttttgtaaagtacgattgtcaaataagttgt 33589150  T

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Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 34591340 - 34591416
Alignment:
Q  161 ctttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||| |||| || |||||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 34591416  T

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Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 36531651 - 36531740
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||  |||||||||||||||||||||||||  | || ||||| ||||||||| || |||||||||||||| | | |||||||||||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaaattttgattgtcaaata 36531740  T

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Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 38234063 - 38234120
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatacc 198  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| ||| ||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacc 38234120  T

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Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 8645234 - 8645298
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||||||||||||||||||||  | |||||||||||| |||||   |||||||||||||||||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatat 8645298  T

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Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 13971182 - 13971253
Alignment:
Q  143 tactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaa 214  Q
    ||||||| ||| |||  ||||||||||| |||| || |||||||| ||||||||| ||||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgtaa 13971253  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 2733044 - 2733129
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||| ||| ||||||   ||||||||| |||| ||| |||||||    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtca 2733129  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 30439521 - 30439447
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| | ||| |||||   |||||||||||||||    
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaa 30439447  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 16327167 - 16327082
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatac-cacttttttctttgtaaaatataattgt 225  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||||| |||| ||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaaattatagttgt 16327082  T

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Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 31597004 - 31597089
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||   ||| |||||||  |||||||||||||| ||| ||||||    
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtc 31597089  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 4994437 - 4994492
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaata 196  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||| ||| ||||    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaata 4994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 42110196 - 42110102
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||| |||||||||||||| ||||||||  | |||||||||| | ||||| |  |||||||||||||| ||| || |||| ||| |||||    
T  42110196 atactcactt-attttttactttatttctctattgttttggtttccatacaaatactaactttttctttgtaaattatgatcgtcacataagttgt 42110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 888257 - 888175
Alignment:
Q  156 ttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaa-tataattgtcaaatacgttgt 237  Q
    ||||| ||||||||||||||||| |||||| | || ||||| |  |||||||||| ||||| |||| |||||||||| |||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtcaaataagttgt 888175  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 16872171 - 16872097
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | ||| |||| ||  ||||||||||||||    
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 16872097  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 39543520 - 39543451
Alignment:
Q  159 tactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    ||||||||||||||||| || || ||||| ||| |||||   ||||||||||||||| ||| ||||||||    
T  39543520 tactttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattatgattgtcaa 39543451  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 6991823 - 6991779
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||||| |||||||||||||||||||||| || || ||||||    
T  6991823 catactcacattattttttactttatctctcttttgctttggttt 6991779  T

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Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 29162991 - 29162895
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttgt 29162895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 19786094 - 19785998
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 19785998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 32815224 - 32815320
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 32815320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 13162975 - 13163071
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  ||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 13163071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 37808779 - 37808683
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| || |||||||||||||||||||||||||  | || ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaatacgttgt 37808683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 38779759 - 38779663
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 38779663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 39231743 - 39231647
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||||||| |||  |||||||||| |||||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttgt 39231647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 40353320 - 40353398
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    ||||||||| |||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 40353398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 13906459 - 13906382
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 13906382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 39332042 - 39332119
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||||||| ||| ||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 21023132 - 21023042
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| |||| |||||||||||||||||||||||||  | |||||||| ||  |||||||||||||||||||||||||||  ||||||||||    
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaata 21023042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 41402577 - 41402660
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| |||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgt 41402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 41666937 - 41666847
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| ||| ||||||||  |||||||||||||||||||||  ||||||||||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaaata 41666847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 47078266 - 47078170
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgtt 238  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||  || |||||||||||||| | |  |||||||||| ||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaatattac-tttttctttgtaaattttggttgtcaaataagttgtt 47078170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 13729782 - 13729856
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| | ||| ||||||| |||||||||||||||    
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaa 13729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 28036801 - 28036874
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 28036874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 29002669 - 29002752
Alignment:
Q  146 tcactttattttttactttatctct-ctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| ||| |||||||||||||||| || |||   |||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  29002669 tcacattactttttactttatctctactgtta---tggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaata 29002752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 35588901 - 35588821
Alignment:
Q  146 tcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    |||| ||||||||||||||||||||||||| || || ||| | ||| |||||||  |||||||||||||| ||||||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 44184574 - 44184500
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||  |||||||||||||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 44184500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 10055647 - 10055562
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||   | | |||||||  |||||||||||||| |||| |||||    
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtc 10055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 39137209 - 39137298
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||| |||||||| ||||||||||| |||| || |||||||| | ||||||  ||||||||||||||||  |||  ||||||||||    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaagttatggttgtcaaata 39137298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 27163633 - 27163585
Alignment:
Q  183 tttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  27163633 tttccatgccaataccatttttttctttgtaaaatatggttgtcaaata 27163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 41026132 - 41026199
Alignment:
Q  159 tactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    |||||| |||||||||| || |||||||| | |||||||||||||||||||||| ||||| ||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgtcaaata-aattgtca 41026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 4713634 - 4713725
Alignment:
Q  146 tcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||||||||||||||||||||||||    |||||||||||| ||||||   |||||||||||||| |||  |||||| ||| |||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaattatggttgtcacataagttgt 4713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 18111627 - 18111552
Alignment:
Q  141 catactcactttat-tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  |||||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaaa 18111552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 39029914 - 39029989
Alignment:
Q  141 catactcactttat-tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| |||||||||||   |||||| ||||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgtaaa 39029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 20482583 - 20482617
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    |||||||||||||||||||||||||||||||||||    
T  20482583 catactcactttattttttactttatctctctatt 20482617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 21822614 - 21822540
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| | ||  ||||||| |||||||||||||||    
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaa 21822540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 26041320 - 26041239
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||| || || ||||| || |||||| || |||||||||||||| |||  |||||||||| |||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttgt 26041239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 43573558 - 43573484
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||||||| ||||    
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 43573484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 46773640 - 46773583
Alignment:
Q  180 tggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| ||||||||||| |||||||||| ||||||||  |||||||||| |||||    
T  46773640 tggtttccgtgccaataccaattttttctttataaaatatggttgtcaaataagttgt 46773583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 16980354 - 16980437
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| |  || ||||||| ||||||||||||||| ||| ||||||    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaaattatgattgtc 16980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 25067289 - 25067353
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||||||||  | |||||| ||||| |||||   |||||||||||||||    
T  25067289 ttattttttactttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaa 25067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 3293197 - 3293272
Alignment:
Q  153 attttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    ||||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||| |||| |||| |||||||    
T  3293197 attttttactttatctctctattgctttgattttcatgcaaatacctactttttctttataaattatagttgtcaa 3293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 11352989 - 11352915
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| | ||  |||||||  ||||||||||||||    
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaa 11352915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 11564949 - 11564983
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  11564949 catactcacattattttttactttatctctctatt 11564983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 21559854 - 21559888
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  21559854 catactcacattattttttactttatctctctatt 21559888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 31844619 - 31844533
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    |||||||| |||||||||||||||||||||||||  | ||||||   | | ||||||   |||||||||||||| |||| |||||||    
T  31844619 atactcacattattttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtcaa 31844533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 33180725 - 33180691
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  33180725 catactcacattattttttactttatctctctatt 33180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 35452588 - 35452514
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||| ||| ||||||   ||||||||| ||||    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaa 35452514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 46532558 - 46532592
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  46532558 catactcacattattttttactttatctctctatt 46532592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 47495026 - 47495060
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  47495026 catactcacattattttttactttatctctctatt 47495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 3062387 - 3062460
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||   ||| ||||||  |||||||||||||||    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaa 3062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 12645920 - 12645851
Alignment:
Q  146 tcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||| ||||||||||||||||||||||||| || || ||| | ||| |||| ||  ||||||||||||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 12645851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 36019473 - 36019569
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgtt 238  Q
    ||||||||| ||||||| |||||||||||| |||| || |||||||  || |||||||    ||||||||||||| |||  |||||||||| ||||||    
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaaataagttgtt 36019569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 23048414 - 23048319
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||  |||| ||||||||  | |||||| ||||| ||||| ||||||| ||||||||| |||  |||| ||||| |||||    
T  23048414 catactcacattattttttatattatatctctattgttttggttttcatgcaaatactacttttt-ctttgtaaattatggttgtaaaataagttgt 23048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 39823868 - 39823959
Alignment:
Q  144 actcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttg 236  Q
    |||||| |||||||||||||||||| ||||||  | |  ||||| || |||||| || |||||||||||||| |||  |||||||||| ||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 39823959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 41486158 - 41486062
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 41486062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 36111411 - 36111314
Alignment:
Q  141 catactcacttta-ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 36111314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 51746277 - 51746372
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| |||||||||||||||||||||||||  | |||||||| |||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgt 51746372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 6141793 - 6141703
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| | |||||||||||||| |||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaaata 6141703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 21260354 - 21260444
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||||| |||||||||||||||  | |||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaata 21260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 30079902 - 30079992
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||| |||  ||||||||||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaata 30079992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 42959328 - 42959418
Alignment:
Q  142 atactcactttatttt-ttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||| ||||||| |||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaata 42959418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 33899341 - 33899245
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||| |||||||||||||||  | |||||||| ||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgt 33899245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 624327 - 624230
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgt-aaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | |||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaaatatggttgtcaaataagttgt 624230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 5932172 - 5932077
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||| ||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgt 5932077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 9118879 - 9118783
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| | ||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgt 9118783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 14451449 - 14451545
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | || ||||||||||||||||||||||||||||  |||||||||| |||||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgt 14451545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 51194325 - 51194421
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| | | |||||||||||||||||||||  | |||||| | |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 51194421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 12112693 - 12112779
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||||||| || || ||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 12112779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 25318080 - 25317991
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||| || ||||||||||||||||||||||||||||  ||||||||||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 25317991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 31076110 - 31076205
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| || |||||| || |||||||||||||| |||  |||||||||| |||||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttgt 31076205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 41082374 - 41082468
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttg 236  Q
    ||||||||| |||||||| ||||||||||||||||||| || ||| | || |||||| || |||||||||||||| ||||||||||||||| ||||    
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataattgtcaaataagttg 41082468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 50273063 - 50272992
Alignment:
Q  166 tctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 50272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 439275 - 439185
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| |||||||||||| || ||||| || || ||||||| | |||||||||||||||||||||||||||  ||||||||||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatatggttgtcaaata 439185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 53152326 - 53152240
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||||||||| ||||  | |||||||  ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 53152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 39344995 - 39344910
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| ||||||||||||||| ||| ||||||    
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtc 39344910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 47965795 - 47965889
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||  |||  | |||||| | |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 47965889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 26206992 - 26206896
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| ||| |||||||||||||||||||||  | |||||||  || || |||||||||||||||||||||||||  |||||||||| |||||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaaataagttgt 26206896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 35820241 - 35820317
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||||| ||||||||||| | || ||||| | ||||||||||||||||||||||||| |||| ||||||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaaata 35820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 17475946 - 17476028
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||||||||||| || |||||||| || |||||| || |||||||||||||| ||| ||||||||||| |||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatgattgtcaaataagttgt 17476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 2999168 - 2999242
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| ||||| |||||||  ||||||||||||||    
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaa 2999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 37066044 - 37066139
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||| ||| || || ||||| ||||||||| || |||||||| ||||| | | ||||||||||| |||||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactac-tttttcttagtaaattttgattgtcaaataagttgt 37066139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 28657456 - 28657382
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||| ||||||    |||||||||||||    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaa 28657382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 26718424 - 26718509
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||   ||| |||||||  |||||||||||||| ||| ||||||    
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 26731052 - 26731137
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||   ||| |||||||  |||||||||||||| ||| ||||||    
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26731137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 28458392 - 28458307
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| | || |||||||   |||||||||||||| ||| ||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 28458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 30170035 - 30169970
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccactttttt 206  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||| ||||||| ||| ||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttttcataccaatactactctttt 30169970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 54669598 - 54669503
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| || |||||||| |||||||||||||||| ||  ||||||| || |||||| || |||||||||||||| |||  |||||||||| |||||    
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttgt 54669503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 48536366 - 48536444
Alignment:
Q  155 tttttactttatctc--tctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||||||||||||  ||||||| | |||||||| || |||||| | ||||||||||||| ||||| |||||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaaata 48536444  T

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Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 14010133 - 14010059
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| | ||| ||||||| |||||||||| ||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttctttataaa 14010059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 46405989 - 46405915
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | ||| |||||||  ||||||||||||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 46405915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 49896681 - 49896607
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| | || ||||||||  ||||||||||||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaa 49896607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 13263411 - 13263378
Alignment:
Q  142 atactcactttattttttactttatctctctatt 175  Q
    ||||||||||||||||||||||||||||||||||    
T  13263411 atactcactttattttttactttatctctctatt 13263378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 27326765 - 27326693
Alignment:
Q  143 tactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 27326693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 23822250 - 23822167
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||  |||  | |||||||| |||||||| |||||||||| || ||||||||  |||||||||| |||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttc-ttataaaatatggttgtcaaataagttgt 23822167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 13086078 - 13086152
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| | ||| |||||||  ||||||||||||||    
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 13086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 22819705 - 22819779
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| | ||| |||||||  ||||||||||||||    
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaa 22819779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 31657702 - 31657776
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||  |||||||  ||||||| ||||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaaa 31657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 43326350 - 43326268
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaat-accac-ttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||||||||||||||||| || |  |||||||  |||| || || |||||| |||||||| |||||||||||||||    
T  43326350 ttattttttactttatctctctattgctataatttccatatcaataactactttttttttttgtaaattataattgtcaaata 43326268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 48335610 - 48335688
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||| |||| |||||||||||||||||| | |||| || | |||| | ||||||||  |||||||||||| ||||||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 48335688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttg 211  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| | | | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 13139204 - 13139289
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| | ||| |||||||  |||||||||||||| |||| |||||    
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtc 13139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 2256333 - 2256250
Alignment:
Q  153 attttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||||| || || ||||| |  |||||| || ||||| |||||||| ||| ||||| ||||| |||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactac-tttttgtttgtaaattatgattgtaaaataagttgt 2256250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 390865 - 390961
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || | |||||| || |||||||||||||||||||||||||||| ||||||||||| |||||    
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttgt 390961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 37508513 - 37508417
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 37508417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 44677499 - 44677403
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 44677403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 10206988 - 10206892
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 10206892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 28419229 - 28419133
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| || |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttgt 28419133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 39020174 - 39020086
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaa 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaa 39020086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 49363266 - 49363176
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaaata 49363176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 32767732 - 32767828
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| || |||| ||||||||||||||||||| |||  |||||||||| |||||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttgt 32767828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 30909090 - 30909181
Alignment:
Q  146 tcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| ||| |||||||||||||||||||||  | |||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaataagttgt 30909181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 11633669 - 11633759
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||||| |||||||||||||||| | ||||||||||||  ||||||||||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaaata 11633759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 22371247 - 22371337
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| || ||||||||||||||||||||||||| || |||||||  ||||||||||| ||||||||||||| | ||| |||||||||||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaaata 22371337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 33375916 - 33375990
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || | |||||| |||||||||||||||| ||||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaaa 33375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 43905029 - 43905119
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||||  || ||||||||||||||||||||||||||||  ||||||||||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 43905119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 39671112 - 39671016
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | || ||||| || ||||| ||||||||||||||||||||||  |||||||||| |||||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaataagttgt 39671016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 36121878 - 36121973
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| ||| ||||||||||||||||||||| || || |||   |||||||||||| ||||||||||||||||||  |||||||||| |||||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttgt 36121973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 54773755 - 54773672
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||| || || |||||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 54773672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 8821686 - 8821760
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||  || ||||| ||||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgtaaa 8821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 29634077 - 29633997
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||| |||||||||||||  | || ||||| ||| |||||||||||||||||||||||||||  ||||||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaaata 29633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 54027998 - 54028094
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||| || |||||||||||||||||||||||||  | || ||||| || |||||||||||||||||||||||| |||  ||||| |||| |||||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtccaataagttgt 54028094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 54195396 - 54195492
Alignment:
Q  142 atactcactttatttt-ttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| ||||||| ||||||||||||||||||||| | |||| | || ||||| |||||||||||||||||| |||  |||||||||| |||||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttgt 54195492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 46982918 - 46982828
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||  ||| ||| |||||||| |||||||| || |  ||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaaata 46982828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 49417631 - 49417704
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||| || ||||||||||||||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaa 49417704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 55013079 - 55013148
Alignment:
Q  162 tttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| |||| || |||||||| || ||||| |||||||||||||||||||||| |||||||||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaata 55013148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 39697237 - 39697163
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||| || |||||||||||||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 39697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 52937239 - 52937313
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||   ||| ||||||| |||||||||||||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaaa 52937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 55400055 - 55400129
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||||||| ||||    
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 55400129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccactttttt 206  Q
    ||||||||  ||||||| |||||||||||||||||  | |||||||| ||||||||||||||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 39907561 - 39907474
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    ||||||||| |||||||||||||||| |||||||| || || ||||| || ||| || |||||||| |||||||| |||  |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaaattatggttgtcaa 39907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 21196180 - 21196254
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||| || |||||||||||||||||||||||||||| || ||| | ||| |||||   |||||||||||||||    
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaaa 21196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 24095421 - 24095347
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| | ||| ||||||   ||||||||||||||    
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaa 24095347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 37927220 - 37927146
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||| | | ||||||  |||||||||| ||||    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttctttataaa 37927146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 46253678 - 46253752
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||   |||||||||||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaaa 46253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 49761363 - 49761449
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||   ||| ||||||   ||||||||| |||| ||| |||||||    
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtca 49761449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 51973383 - 51973293
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| || |||||||| ||||||||||||||||  | ||||||  ||| |||||| | ||||||||||||||| |||  ||||||||||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaaata 51973293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 3953490 - 3953405
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||| |||||||||||| || |||||| ||||| |||| ||  ||||||||| |||| ||| ||||||    
T  3953490 catactcacattactttttactctatctctctattgctttggttttcatgcaaatatcaactttttctttataaattatgattgtc 3953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 24480463 - 24480382
Alignment:
Q  144 actcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    |||||| |||||||||||||||||| ||||||||| ||||||   ||| ||||||   |||||||||||||| ||| |||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaaattatgattgt 24480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatacc 198  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||| ||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 26996372 - 26996461
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatacca-cttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| |||||||||||||||  |||||||| || |||||||| || ||||||||  |||||||  ||||||||||  ||||||||||    
T  26996372 catactcacattattttttacttta--tctctattgctatggtttccgtgtcaataccattttttttcaatgtaaaatatggttgtcaaata 26996461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 37035541 - 37035494
Alignment:
Q  141 catactcactttatttttt-actttatctctctattactctggtttcc 187  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttcc 37035494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 24645412 - 24645486
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | ||| | ||||  |||||||||||||||    
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaa 24645486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 46019518 - 46019592
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | | | ||||||  | |||||||||||||    
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaaa 46019592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 50206985 - 50206911
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | ||| |||| ||  ||||||||||||||    
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 50206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 51465929 - 51465855
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| | ||| |||||||  ||||||||||||||    
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 51465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 24482978 - 24482905
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaa 214  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| | ||| |||||||  |||||||||||||    
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaa 24482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 35201531 - 35201459
Alignment:
Q  164 tatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||| || |||||| | || |||||| ||||||| ||||||||| ||| ||||||||||| |||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactacttttt-ctttgtaaattatgattgtcaaataagttgt 35201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  141 catactcactttat-tttttactttatctctctattactctggtttccatgccaatac 197  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| | |||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 13934607 - 13934544
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||| ||||||||  | |||||||| ||||||||  || ||||||||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaataatac-tttttctttgtaaa 13934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 21195891 - 21195816
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||||||||||||||| || || ||||| || |||||| || |||| |||| |||| |||| ||||||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactac-ttttcctttataaattatagttgtcaaata 21195816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaata 196  Q
    ||||||||||||  |||||||||| ||||||||||||| |||||||| || |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 46082136 - 46082046
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaaata 46082046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 756912 - 757008
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||| |||  |||||||||| |||||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttgt 757008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 1852966 - 1852870
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||| |||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 1852870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 3024765 - 3024669
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  ||||||||||||||||||||||||| || |||||||| |||||||| || ||||||||||||||||||| ||||||||||| |||||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaataagttgt 3024669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 3603167 - 3603263
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 3603263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 8411733 - 8411637
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgt 8411637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 9008281 - 9008377
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 9008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 20565133 - 20565037
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| | |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||  |||||||||| |||||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttgt 20565037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 33024586 - 33024490
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||| ||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgt 33024490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 902694 - 902784
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaata 902784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 38303703 - 38303613
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||| | ||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 38303613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 4514469 - 4514373
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| |||||||||||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgt 4514373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 7128174 - 7128270
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| ||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgt 7128270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 26837508 - 26837604
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||||  || ||||||||||||||||||||||||||||  |||||||||| |||||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgt 26837604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 34008236 - 34008331
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||| || |||||||||||||| | || |||||||||| |||||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaaataagttgt 34008331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 26585893 - 26585798
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||| ||||||||||||||||| |||||||  | |||||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 26585798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 36779284 - 36779194
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    |||||| || ||| ||||||||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| |||||||||||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaata 36779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 46172422 - 46172332
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| |||||||||| |||||||||||||| || | |||| | ||||||||||||||||||||||||||||| || |||| |||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaaaatttagttgttaaata 46172332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 51191844 - 51191940
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||  ||||||||||||||||||||  | || ||||| ||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgt 51191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 16986994 - 16987089
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||| |||||| || || ||||| || |||||| || |||||||||||||| | ||||||||||||| |||||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaaataagttgt 16987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 21340578 - 21340673
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| || ||||| || ||||||| |||||||||||  |||||||||| |||||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaaataagttgt 21340673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 21486332 - 21486268
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttt 205  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 47214264 - 47214359
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||| ||||||||| || |||||||||||||| | |  |||||||||| |||||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttgt 47214359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 51286382 - 51286287
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||| || |||||||||||||| | |  |||||||||| |||||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattttggttgtcaaataagttgt 51286287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 36673746 - 36673657
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||  ||||||||||||||||||||||||| || |||||||| || |||||| || |||||||||||||| |||  ||||||||||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 36673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 50781585 - 50781500
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| ||||||| |||||||||| |||| ||| ||||||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtc 50781500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 1790564 - 1790660
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  ||| ||||||||||||| |||||||  |  ||||||| |||||||| || |||||||||||||||||||  |||||||||| |||||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaaataagttgt 1790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 13489718 - 13489792
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 13489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 32319324 - 32319251
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||| |||| |||||||||||||| |||||||| || |||||| || ||||||||||||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaa 32319251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 50328156 - 50328082
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 50328082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 50824797 - 50824871
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| |||| |||||||   ||||||||||||||    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaa 50824871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 52362538 - 52362612
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||| ||||    
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 52362612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 41507210 - 41507113
Alignment:
Q  141 catactcactttatttt-ttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||| || ||||||||||| ||||||| | |||||| |||| |||||||   |||||||||||||| |||| |||||||||| |||||    
T  41507210 catactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaaataagttgt 41507113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 29586049 - 29586097
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccat 189  Q
    ||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttccat 29586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 32915087 - 32915003
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgt 225  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | ||| |||||||  |||||||||||||| ||| |||||    
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgt 32915003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 24673132 - 24673218
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgtt 238  Q
    |||||||||| |||||||||||||| |||| |||||| || |||||| | ||||||||||||||| | |  |||||||||| ||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgtaaatttttgttgtcaaataagttgtt 24673218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 40316959 - 40316885
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||| ||||    
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 40316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 34040515 - 34040478
Alignment:
Q  141 catactcactttattttttactttatctctctattact 178  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  34040515 catactcacattattttttactttatctctctattact 34040478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 34254366 - 34254281
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| | ||| ||||| |  |||||||||||||| |||| |||||    
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtc 34254281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 50882115 - 50882039
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    |||||||||||||||||||||||||||| || ||| | ||| |||||   |||||||||| |||| ||| |||||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtca 50882039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 19969577 - 19969490
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | |||  ||||||   ||||||||||||| |||  |||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatggttgtcaa 19969490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 48624933 - 48624988
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaatac 197  Q
    |||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  48624933 atactcacattattttttactttatctctctattgctttgattttcatgcaaatac 48624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 3226073 - 3226031
Alignment:
Q  143 tactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||| ||||||||||||||||||||||||| || ||||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttt 3226031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 4469433 - 4469347
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||| ||| || |||||||  ||  |||||   ||||||||||||||| ||| ||||||  |||||||||    
T  4469433 ttattttttactttatctctcaattgctttggtttctgtgtaaatacatattttttctttgtaaattatgattgtcttatacgttgt 4469347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 10890061 - 10889987
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | |||  ||||||  ||||||||||||||    
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 15015454 - 15015528
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| | ||| |||||||  ||||||||||||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaaa 15015528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 33125340 - 33125254
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    ||||||||| ||| |||||||||||||| |||||| || ||||||  |||| ||||||   ||||||||| |||| ||| |||||||    
T  33125340 catactcacattactttttactttatctttctattgctttggtttttatgcaaatacctactttttctttataaattatgattgtca 33125254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 38713636 - 38713722
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||||||||||||||| |||| || || ||| | ||| ||||||  |||||||||| |||| ||| ||||||| ||| |||||    
T  38713636 ttattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtcatataagttgt 38713722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 44632584 - 44632618
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  44632584 catactcacattattttttactttatctctctatt 44632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 48220159 - 48220125
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  48220159 catactcacattattttttactttatctctctatt 48220125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 52714916 - 52714842
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | ||| | |||||  ||||||||||||||    
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaa 52714842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 25259140 - 25259213
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||  |||||||||||||||| ||||||||  | || ||| ||||| ||||||| |||||||||| ||||    
T  25259140 atactcaaattattttttactttatttctctattgttttgattttcatgcaaataccaattttttctttataaa 25259213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  141 catactcactttattttttactttatctctctat 174  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 46543457 - 46543373
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    |||||||||  |||||||||||||||||||||||| || |||||| | ||| |||| ||  ||||| ||| |||| ||||||||||    
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaatatcaacttttt-tttttaaattataattgtc 46543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 8200131 - 8200175
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggttt 185  Q
    ||||||||| ||||||||||||||||| ||||||| || ||||||    
T  8200131 catactcacattattttttactttatccctctattgctttggttt 8200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 35539278 - 35539202
Alignment:
Q  151 ttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    |||||||||||||||||||||| ||  | |||||||| ||| |||||    |||||||||||||| |||| ||||||    
T  35539278 ttattttttactttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtca 35539202  T

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Target: scaffold0471 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 63 - 159
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| | |||||||||||||||||||||||||||||||  |||||||||| |||||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgt 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 2075466 - 2075370
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | | |||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttgt 2075370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 3610976 - 3610880
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||  || ||||||| |||||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttgt 3610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 34504076 - 34504172
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| ||| |||| |||||||||||||||| || |||||||| || |||||||| ||||||||||||||||||| ||||||||||| |||||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttgt 34504172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 14986746 - 14986663
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataagttgt 14986663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 2777331 - 2777242
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||| ||||||||| ||||||||||| || |||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaaata 2777242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 11547544 - 11547470
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaa 11547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 30036797 - 30036713
Alignment:
Q  153 attttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttgt 30036713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 5327593 - 5327510
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||||||||||||| || || |||||||| || |||||||||||||||||||||||| |||  |||||||||| |||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgt 5327510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 335119 - 335213
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||  |||||||| |||||||||||  ||| || |||||||| ||||||||| ||||||||||||||||| ||| ||||||||||| |||||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaataagttgt 335213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 4820307 - 4820387
Alignment:
Q  141 catactcactttattttttactttatctctctattactct--ggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    ||||||||| |||||||||||||||||||||||||  | |  ||||| | |||||||||||||||||||||||||||||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 30152545 - 30152455
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| | ||||||||||||||||||||| | || |||||||| | ||||||||| |||||| |||||||| |||  ||||||||||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaata 30152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 14693266 - 14693181
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtca 227  Q
    |||||||| |||||||||||||||||||||| || || |||||||| ||| ||||||   |||||||||||||| |||| ||||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtca 14693181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 35213576 - 35213491
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  |||||||||||||| ||| ||||||    
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtc 35213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 754453 - 754379
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 13658888 - 13658977
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| ||||||||||||| |||||||||||  | |||||||| || |||||| || |||||||||||||| |||  ||||||||||    
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 13658977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 22341189 - 22341094
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||| |  | |||| || |||||||||||||| |||  |||||||||| |||||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaaattattgttgtcaaataagttgt 22341094  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 3199016 - 3199105
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaata 231  Q
    ||||||||| |||||||| | ||||||||| |||| || |||||||| || |||||| ||||||| |||| |||| ||| |||||||||||    
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactacttttt-ctttataaattatgattgtcaaata 3199105  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 14699679 - 14699605
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| |||||||||||||||||||||| || || |||||| | ||| ||||||   ||||||||||||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaa 14699605  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 32459518 - 32459457
Alignment:
Q  154 ttttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    |||||||||||||||||||||| || |||||| | ||| |||||||  ||||||||||||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 32459457  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 6531198 - 6531163
Alignment:
Q  141 catactcactttattttttactttatctctctatta 176  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6531198 catactcacattattttttactttatctctctatta 6531163  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 13143397 - 13143323
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| | ||| ||||| |  ||||||||||||||    
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaa 13143323  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 20822883 - 20822825
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaatacca 199  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||    
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacca 20822825  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 32046754 - 32046788
Alignment:
Q  141 catactcactttattttttactttatctctctatt 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  32046754 catactcacattattttttactttatctctctatt 32046788  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 1369430 - 1369490
Alignment:
Q  155 tttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||||||||||||||| || || ||| | ||| |||||||  ||||||||||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 1369490  T

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Target: scaffold0449 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 9260 - 9355
Alignment:
Q  142 atactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||||||  ||| ||||||||||||||||||||| || |  ||||| |||||||||||||||||||||| ||||||||  |||||||||| |||||    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaataagttgt 9355  T

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Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 122887 - 122973
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaa 228  Q
    |||||| || |||||||||||||||| |||||||| || |||||||| ||||||||||| |||||| ||||||||||||  |||||||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtcaa 122973  T

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Target: scaffold0687 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 2253 - 2350
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccactt-ttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    |||| |||| ||||||||||||||||||||||||| || |||||||| || |||||||| || |||| ||| |||| ||| ||||||||||| |||||    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgt 2350  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 38481 - 38566
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtc 226  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| | ||| |||||||  |||||||||||||| |||| |||||    
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

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Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 19692 - 19770
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    ||||||||| ||| | ||||||||||||| ||||| || |||||||  |  ||||||||||||||||||||||||||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

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Target: scaffold0532 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 11020 - 11116
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatataattgtcaaatacgttgt 237  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| | ||| ||||||   |||||||||||||| ||| ||||||| ||| |||||    
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtcacataagttgt 11116  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 134318 - 134245
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaa 214  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| | || |||||||  ||||||||||||||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaa 134245  T

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Target: scaffold1956 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 825 - 900
Alignment:
Q  141 catactcactttatttt-ttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaa 215  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| | ||| |||| |  |||||||||||||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaaa 900  T

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Target: scaffold0416 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 6914 - 6960
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttcc 187  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttcc 6960  T

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Target: scaffold0204 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 23132 - 23210
Alignment:
Q  141 catactcactttattttttactttatctctctattactctggtttccatgccaataccacttttttctttgtaaaatat 219  Q
    |||| |||| |||||||||||||||||| | |||| || | |||| | ||||||||  |||||||||||| ||||||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 23210  T

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