View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9533A_low_206 (Length: 230)
Name: NF9533A_low_206
Description: NF9533A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9533A_low_206 |
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Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 51376514 - 51376703
Alignment:
| Q |
25 |
tatagggcatattgcattaggcttaaacgccttacaaagttacccatcatcacaagtaaatgagacaaactgataaaatacgcaaggtacatatttttaa |
124 |
Q |
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| T |
51376514 |
tatagggcatattgcattaggcttaaacgccttacaaagttacccatcatcacaagtaaatgagacaaactcataaaatacgcaaggtacatatttttaa |
51376613 |
T |
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| Q |
125 |
ctttcaagcatttgacattaatctttaagttttgagcatcaaacattaaatttgtaattatcaaatacgcattgtgaccacattgatgtc |
214 |
Q |
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| T |
51376614 |
ctttcaagcatttgacattaatctttaagtttcgagcatcaaacattaaatttgtaattatcaaatacgcattgtgaccgcattgatgtc |
51376703 |
T |
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