View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9535_1 (Length: 1612)

Name: NF9535_1
Description: NF9535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9535_1
NF9535_1
[»] chr8 (52 HSPs)
chr8 (309-1612)||(32525924-32527228)
chr8 (1-308)||(16875566-16875873)
chr8 (1-308)||(21848808-21849115)
chr8 (2-308)||(20650827-20651133)
chr8 (2-308)||(22436306-22436612)
chr8 (1-307)||(23155513-23155817)
chr8 (4-308)||(21195014-21195317)
chr8 (7-308)||(23902167-23902468)
chr8 (4-100)||(16414302-16414398)
chr8 (92-308)||(20394695-20394911)
chr8 (50-308)||(23887027-23887289)
chr8 (92-308)||(22422454-22422670)
chr8 (96-308)||(22988733-22988945)
chr8 (92-249)||(22376015-22376172)
chr8 (92-308)||(23652044-23652260)
chr8 (161-308)||(22131672-22131819)
chr8 (90-308)||(31569402-31569620)
chr8 (107-303)||(17672600-17672796)
chr8 (107-303)||(20016840-20017036)
chr8 (90-288)||(20008481-20008679)
chr8 (107-308)||(18858580-18858781)
chr8 (200-303)||(19114698-19114801)
chr8 (15-186)||(19869818-19869989)
chr8 (90-288)||(21927450-21927649)
chr8 (92-291)||(22246995-22247194)
chr8 (107-300)||(21252955-21253148)
chr8 (90-243)||(28982979-28983132)
chr8 (90-243)||(28988198-28988351)
chr8 (107-303)||(22118752-22118948)
chr8 (107-303)||(22127536-22127732)
chr8 (90-249)||(27356598-27356757)
chr8 (90-288)||(19861458-19861656)
chr8 (90-308)||(21323839-21324056)
chr8 (170-300)||(21392501-21392631)
chr8 (170-300)||(21786995-21787125)
chr8 (1114-1172)||(26765012-26765070)
chr8 (90-243)||(6605726-6605879)
chr8 (195-308)||(15535386-15535499)
chr8 (155-308)||(19482689-19482842)
chr8 (92-249)||(19980029-19980186)
chr8 (118-243)||(20390167-20390292)
chr8 (195-308)||(30311809-30311922)
chr8 (90-246)||(22372996-22373152)
chr8 (161-249)||(32602207-32602295)
chr8 (71-237)||(4984116-4984282)
chr8 (101-243)||(16269795-16269937)
chr8 (1139-1217)||(19966441-19966519)
chr8 (1139-1217)||(21026477-21026555)
chr8 (155-249)||(22041889-22041983)
chr8 (90-288)||(23656950-23657148)
chr8 (1325-1368)||(18012127-18012170)
chr8 (399-500)||(18012996-18013097)
[»] chr1 (44 HSPs)
chr1 (309-1609)||(6837351-6838652)
chr1 (312-1184)||(8975915-8976787)
chr1 (654-1603)||(28599508-28600457)
chr1 (312-1154)||(6385454-6386294)
chr1 (1-308)||(20829492-20829799)
chr1 (1-308)||(20927006-20927313)
chr1 (1187-1609)||(8976984-8977393)
chr1 (1-307)||(41215956-41216262)
chr1 (1-165)||(20527148-20527312)
chr1 (1493-1612)||(2797341-2797460)
chr1 (20-300)||(21200998-21201278)
chr1 (1300-1609)||(6385067-6385373)
chr1 (2-108)||(22133857-22133963)
chr1 (318-500)||(26402765-26402947)
chr1 (1-63)||(35930925-35930987)
chr1 (107-303)||(21838907-21839103)
chr1 (107-303)||(33389235-33389431)
chr1 (107-303)||(51331699-51331895)
chr1 (107-300)||(20140043-20140236)
chr1 (48-297)||(21750903-21751152)
chr1 (107-303)||(21832259-21832455)
chr1 (102-308)||(21862574-21862780)
chr1 (107-300)||(430322-430515)
chr1 (90-243)||(31538186-31538339)
chr1 (90-243)||(37679097-37679250)
chr1 (90-243)||(48424921-48425074)
chr1 (90-243)||(52987789-52987942)
chr1 (90-246)||(21743741-21743897)
chr1 (50-249)||(50618547-50618746)
chr1 (1114-1172)||(9794223-9794281)
chr1 (161-303)||(16348856-16348998)
chr1 (155-308)||(41351916-41352069)
chr1 (161-308)||(17043275-17043422)
chr1 (90-249)||(20834089-20834248)
chr1 (185-288)||(41308645-41308748)
chr1 (1139-1217)||(20785296-20785374)
chr1 (170-300)||(22360513-22360643)
chr1 (1139-1217)||(29470684-29470762)
chr1 (1114-1172)||(45997596-45997654)
chr1 (164-249)||(21026184-21026269)
chr1 (90-246)||(21952923-21953079)
chr1 (1477-1580)||(49211817-49211920)
chr1 (164-249)||(22503552-22503637)
chr1 (1481-1594)||(26401664-26401777)
[»] chr4 (39 HSPs)
chr4 (309-1045)||(28390887-28391624)
chr4 (1-308)||(15291186-15291493)
chr4 (20-243)||(12340912-12341135)
chr4 (50-308)||(14696050-14696308)
chr4 (318-500)||(1543132-1543314)
chr4 (92-308)||(14849225-14849441)
chr4 (50-288)||(8707868-8708106)
chr4 (107-303)||(40474982-40475178)
chr4 (90-288)||(15323174-15323372)
chr4 (107-303)||(14301853-14302049)
chr4 (107-303)||(23957689-23957885)
chr4 (47-249)||(8322850-8323052)
chr4 (90-308)||(51604909-51605127)
chr4 (239-308)||(14999252-14999321)
chr4 (107-303)||(8051497-8051693)
chr4 (90-246)||(15072358-15072514)
chr4 (107-303)||(27713278-27713474)
chr4 (161-308)||(14682504-14682651)
chr4 (90-243)||(3262911-3263064)
chr4 (90-243)||(44659983-44660136)
chr4 (90-246)||(15001482-15001638)
chr4 (50-220)||(18547696-18547866)
chr4 (239-308)||(9292772-9292841)
chr4 (90-233)||(1647394-1647537)
chr4 (161-303)||(12478542-12478684)
chr4 (161-303)||(19776721-19776863)
chr4 (195-308)||(8388349-8388462)
chr4 (107-248)||(15145759-15145900)
chr4 (90-243)||(29451654-29451807)
chr4 (195-291)||(18613786-18613882)
chr4 (107-249)||(17093023-17093165)
chr4 (195-297)||(18225408-18225510)
chr4 (161-249)||(16234920-16235008)
chr4 (1325-1368)||(15538398-15538441)
chr4 (1477-1580)||(25429253-25429356)
chr4 (1481-1594)||(1542031-1542144)
chr4 (54-147)||(14161568-14161661)
chr4 (200-249)||(16353474-16353523)
chr4 (266-303)||(29037437-29037474)
[»] chr5 (37 HSPs)
chr5 (367-1593)||(20081951-20083164)
chr5 (1-308)||(23507535-23507842)
chr5 (1-308)||(21935398-21935705)
chr5 (1-308)||(24583061-24583368)
chr5 (318-500)||(17795254-17795436)
chr5 (50-308)||(20466358-20466616)
chr5 (92-308)||(23473096-23473312)
chr5 (107-303)||(22331203-22331399)
chr5 (65-308)||(21409006-21409246)
chr5 (107-300)||(25428310-25428503)
chr5 (107-308)||(40710649-40710850)
chr5 (107-303)||(14998055-14998251)
chr5 (107-303)||(19771834-19772030)
chr5 (92-308)||(26737028-26737244)
chr5 (107-303)||(29474389-29474585)
chr5 (107-303)||(37289812-37290008)
chr5 (90-308)||(21679077-21679295)
chr5 (239-308)||(23505095-23505164)
chr5 (74-303)||(27612228-27612457)
chr5 (164-308)||(22349788-22349932)
chr5 (16-163)||(20250509-20250656)
chr5 (152-303)||(22136542-22136693)
chr5 (173-303)||(16358376-16358506)
chr5 (173-303)||(34568368-34568498)
chr5 (92-249)||(21337595-21337752)
chr5 (90-243)||(24796696-24796849)
chr5 (155-308)||(27666854-27667007)
chr5 (90-246)||(17267633-17267789)
chr5 (107-303)||(27520280-27520476)
chr5 (107-303)||(41772716-41772912)
chr5 (152-303)||(27683761-27683912)
chr5 (195-308)||(18780983-18781096)
chr5 (101-249)||(20344192-20344340)
chr5 (90-246)||(22234219-22234375)
chr5 (101-303)||(22504535-22504737)
chr5 (90-243)||(14885290-14885443)
chr5 (1481-1594)||(17794153-17794266)
[»] scaffold0302 (2 HSPs)
scaffold0302 (1-308)||(7121-7428)
scaffold0302 (1-308)||(179-486)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-308)||(25362-25669)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-308)||(34053-34360)
[»] scaffold0162 (2 HSPs)
scaffold0162 (1-308)||(14876-15183)
scaffold0162 (1-308)||(11205-11512)
[»] chr7 (58 HSPs)
chr7 (1-308)||(7825826-7826133)
chr7 (1-308)||(27105811-27106118)
chr7 (1-308)||(27172207-27172514)
chr7 (1-308)||(4441854-4442161)
chr7 (1-308)||(13457961-13458268)
chr7 (1-308)||(17925576-17925883)
chr7 (5-150)||(13378969-13379112)
chr7 (42-308)||(17143354-17143620)
chr7 (11-308)||(15716950-15717247)
chr7 (50-308)||(48813338-48813595)
chr7 (153-308)||(11770430-11770585)
chr7 (90-308)||(15626451-15626669)
chr7 (90-303)||(11386533-11386746)
chr7 (90-288)||(19149158-19149356)
chr7 (90-308)||(19614602-19614820)
chr7 (90-288)||(20748557-20748755)
chr7 (90-288)||(12204904-12205102)
chr7 (107-303)||(11235356-11235552)
chr7 (107-303)||(15159200-15159396)
chr7 (161-308)||(11551299-11551446)
chr7 (90-288)||(14262349-14262546)
chr7 (107-303)||(8709536-8709732)
chr7 (90-246)||(14139668-14139824)
chr7 (107-303)||(14334327-14334523)
chr7 (90-246)||(23503974-23504130)
chr7 (161-308)||(14956480-14956627)
chr7 (90-243)||(26092902-26093055)
chr7 (107-308)||(44789494-44789695)
chr7 (107-303)||(10872621-10872817)
chr7 (164-308)||(12689428-12689572)
chr7 (90-246)||(18052057-18052213)
chr7 (173-308)||(15559-15694)
chr7 (50-220)||(39232-39402)
chr7 (107-249)||(14041680-14041822)
chr7 (107-249)||(14351710-14351852)
chr7 (90-243)||(11301317-11301470)
chr7 (92-308)||(15147012-15147229)
chr7 (90-243)||(26116694-26116847)
chr7 (90-243)||(49154293-49154446)
chr7 (90-302)||(13675385-13675597)
chr7 (90-249)||(13966772-13966931)
chr7 (107-249)||(13688026-13688168)
chr7 (1114-1172)||(35929384-35929442)
chr7 (90-303)||(13023289-13023502)
chr7 (239-308)||(14938272-14938341)
chr7 (239-308)||(15365865-15365934)
chr7 (90-303)||(16948576-16948789)
chr7 (107-234)||(15122170-15122297)
chr7 (90-246)||(15100707-15100863)
chr7 (107-246)||(16070416-16070555)
chr7 (1477-1580)||(35939911-35940014)
chr7 (266-303)||(8200559-8200596)
chr7 (152-249)||(14284542-14284639)
chr7 (203-308)||(15342358-15342463)
chr7 (107-228)||(18588314-18588435)
chr7 (399-500)||(35968006-35968107)
chr7 (399-500)||(35989418-35989519)
chr7 (399-500)||(43584672-43584773)
[»] chr6 (49 HSPs)
chr6 (1-308)||(16380546-16380853)
chr6 (1-308)||(16648142-16648449)
chr6 (1-308)||(23998049-23998356)
chr6 (1-308)||(1646987-1647294)
chr6 (1-308)||(14130270-14130577)
chr6 (1-308)||(16099810-16100123)
chr6 (119-308)||(23026016-23026205)
chr6 (177-308)||(18836257-18836388)
chr6 (217-308)||(18578010-18578101)
chr6 (1-89)||(23025919-23026007)
chr6 (217-308)||(19985805-19985896)
chr6 (50-237)||(23085993-23086180)
chr6 (318-500)||(7035836-7036018)
chr6 (107-249)||(23080329-23080471)
chr6 (90-249)||(19881158-19881317)
chr6 (162-308)||(18965629-18965775)
chr6 (50-300)||(18406166-18406416)
chr6 (107-308)||(2873082-2873283)
chr6 (144-308)||(18196049-18196213)
chr6 (107-303)||(24294061-24294257)
chr6 (110-308)||(34643868-34644066)
chr6 (107-300)||(20634219-20634412)
chr6 (107-300)||(22760734-22760927)
chr6 (239-306)||(16234831-16234898)
chr6 (163-308)||(22828690-22828835)
chr6 (90-288)||(14378178-14378376)
chr6 (90-288)||(14379728-14379926)
chr6 (50-243)||(19487504-19487687)
chr6 (90-288)||(24366233-24366431)
chr6 (162-308)||(25114353-25114499)
chr6 (90-244)||(25769709-25769863)
chr6 (5-161)||(14643664-14643817)
chr6 (155-308)||(16925965-16926118)
chr6 (90-303)||(18796496-18796709)
chr6 (107-308)||(25608140-25608341)
chr6 (155-308)||(27564160-27564313)
chr6 (161-305)||(28261530-28261674)
chr6 (90-246)||(28281075-28281231)
chr6 (161-305)||(28284242-28284386)
chr6 (161-305)||(28340279-28340423)
chr6 (42-249)||(19866547-19866754)
chr6 (155-249)||(16961809-16961903)
chr6 (50-124)||(18963310-18963384)
chr6 (107-249)||(22435729-22435871)
chr6 (107-249)||(22444127-22444269)
chr6 (266-308)||(27189237-27189279)
chr6 (266-308)||(27259961-27260003)
chr6 (239-308)||(21929005-21929074)
chr6 (399-500)||(26255821-26255922)
[»] chr3 (57 HSPs)
chr3 (1-308)||(30139372-30139679)
chr3 (1-308)||(30148923-30149230)
chr3 (1-308)||(8272666-8272973)
chr3 (911-1601)||(2802999-2803671)
chr3 (1-308)||(13965619-13965927)
chr3 (1-308)||(15611669-15611976)
chr3 (1-300)||(15948737-15949036)
chr3 (1-308)||(6151120-6151427)
chr3 (1-308)||(25767884-25768191)
chr3 (309-590)||(2803712-2803996)
chr3 (92-308)||(15261186-15261402)
chr3 (182-308)||(6710865-6710991)
chr3 (90-308)||(14088239-14088457)
chr3 (90-308)||(11950253-11950471)
chr3 (90-308)||(13970465-13970683)
chr3 (74-303)||(13254251-13254480)
chr3 (74-303)||(20060394-20060623)
chr3 (107-303)||(15346618-15346814)
chr3 (107-303)||(15723307-15723503)
chr3 (90-237)||(11889636-11889783)
chr3 (161-303)||(10007161-10007303)
chr3 (107-308)||(15340825-15341026)
chr3 (107-308)||(15400890-15401091)
chr3 (243-308)||(16258709-16258774)
chr3 (107-300)||(17491414-17491607)
chr3 (239-308)||(18915292-18915361)
chr3 (90-243)||(28755949-28756102)
chr3 (107-303)||(15587765-15587961)
chr3 (156-240)||(55498486-55498570)
chr3 (161-308)||(6602292-6602439)
chr3 (161-308)||(12888265-12888412)
chr3 (101-308)||(41179088-41179295)
chr3 (161-303)||(5109038-5109180)
chr3 (161-303)||(10907771-10907913)
chr3 (173-303)||(16637334-16637464)
chr3 (90-308)||(17187940-17188158)
chr3 (173-303)||(48427008-48427138)
chr3 (239-308)||(12795802-12795871)
chr3 (90-243)||(47125575-47125728)
chr3 (90-246)||(13943652-13943808)
chr3 (90-246)||(15229231-15229387)
chr3 (90-246)||(15235099-15235255)
chr3 (90-246)||(44778875-44779031)
chr3 (110-249)||(14874875-14875014)
chr3 (50-308)||(15014072-15014330)
chr3 (1114-1172)||(26711462-26711520)
chr3 (90-303)||(11959514-11959727)
chr3 (71-248)||(13318828-13319005)
chr3 (155-308)||(53383439-53383592)
chr3 (239-308)||(55514237-55514306)
chr3 (185-308)||(12358967-12359090)
chr3 (162-308)||(5423358-5423504)
chr3 (195-308)||(12179904-12180017)
chr3 (107-308)||(16755074-16755275)
chr3 (90-246)||(16379273-16379429)
chr3 (152-243)||(10385302-10385393)
chr3 (152-303)||(16328067-16328218)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-308)||(42226-42533)
scaffold0076 (90-308)||(31797-32015)
[»] chr2 (44 HSPs)
chr2 (1-308)||(24829756-24830063)
chr2 (5-308)||(22279673-22279976)
chr2 (2-308)||(24568237-24568543)
chr2 (2-308)||(22760138-22760444)
chr2 (1-304)||(25130181-25130484)
chr2 (551-1080)||(13812516-13813012)
chr2 (28-308)||(10037927-10038207)
chr2 (28-308)||(10098312-10098592)
chr2 (90-288)||(23112324-23112522)
chr2 (50-308)||(24818847-24819105)
chr2 (65-303)||(30010816-30011054)
chr2 (90-303)||(23098675-23098888)
chr2 (239-308)||(12639039-12639108)
chr2 (107-303)||(24711607-24711803)
chr2 (152-303)||(27372842-27372993)
chr2 (152-303)||(41607104-41607255)
chr2 (312-395)||(43371732-43371815)
chr2 (90-308)||(27789308-27789526)
chr2 (65-303)||(30209549-30209787)
chr2 (90-243)||(1065384-1065537)
chr2 (107-303)||(27219589-27219785)
chr2 (161-308)||(21143769-21143916)
chr2 (107-300)||(23106402-23106595)
chr2 (107-303)||(10870423-10870619)
chr2 (164-308)||(24875481-24875625)
chr2 (173-308)||(16926928-16927063)
chr2 (173-308)||(17000568-17000703)
chr2 (152-303)||(24263943-24264094)
chr2 (173-303)||(9485789-9485919)
chr2 (161-303)||(44384298-44384440)
chr2 (90-303)||(23278349-23278562)
chr2 (90-243)||(31832291-31832444)
chr2 (90-246)||(12575983-12576139)
chr2 (195-303)||(22323618-22323726)
chr2 (170-300)||(22734511-22734641)
chr2 (164-249)||(24706213-24706298)
chr2 (206-303)||(45534513-45534610)
chr2 (152-303)||(23295508-23295659)
chr2 (170-301)||(24950165-24950296)
chr2 (107-249)||(9337209-9337351)
chr2 (173-249)||(23189545-23189621)
chr2 (164-249)||(21323997-21324082)
chr2 (164-249)||(24677116-24677201)
chr2 (155-248)||(27208894-27208987)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-308)||(26297-26604)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-308)||(5837-6146)
scaffold0124 (195-308)||(14168-14281)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-308)||(7892-8199)
scaffold0266 (90-288)||(16100-16298)
[»] scaffold0022 (4 HSPs)
scaffold0022 (8-308)||(8864-9164)
scaffold0022 (50-308)||(40600-40858)
scaffold0022 (50-308)||(74320-74578)
scaffold0022 (50-249)||(55782-55981)
[»] scaffold0218 (2 HSPs)
scaffold0218 (2-308)||(1984-2290)
scaffold0218 (5-308)||(26296-26598)
[»] scaffold0008 (4 HSPs)
scaffold0008 (1-308)||(132520-132827)
scaffold0008 (160-304)||(25798-25942)
scaffold0008 (1-105)||(25938-26042)
scaffold0008 (191-300)||(85451-85560)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-308)||(24144-24451)
scaffold0120 (107-300)||(7996-8189)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-308)||(6960-7267)
[»] scaffold1488 (1 HSPs)
scaffold1488 (1-308)||(834-1140)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-308)||(1915-2213)
[»] scaffold0387 (1 HSPs)
scaffold0387 (14-305)||(16029-16320)
[»] scaffold0876 (2 HSPs)
scaffold0876 (1-307)||(977-1283)
scaffold0876 (239-308)||(4502-4571)
[»] scaffold0092 (1 HSPs)
scaffold0092 (5-279)||(104-378)
[»] scaffold0021 (3 HSPs)
scaffold0021 (2-308)||(31455-31760)
scaffold0021 (2-289)||(21879-22165)
scaffold0021 (52-306)||(7184-7438)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-237)||(1652-1888)
[»] scaffold0561 (1 HSPs)
scaffold0561 (2-308)||(7037-7339)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-132)||(6888-7019)
[»] scaffold0635 (1 HSPs)
scaffold0635 (28-308)||(8863-9143)
[»] scaffold0083 (1 HSPs)
scaffold0083 (50-308)||(9114-9372)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-98)||(2117-2214)
[»] scaffold0011 (3 HSPs)
scaffold0011 (92-308)||(24655-24871)
scaffold0011 (263-308)||(181892-181937)
scaffold0011 (170-288)||(150557-150675)
[»] scaffold0244 (1 HSPs)
scaffold0244 (217-308)||(25024-25115)
[»] scaffold0074 (1 HSPs)
scaffold0074 (59-308)||(5080-5328)
[»] scaffold0647 (2 HSPs)
scaffold0647 (65-305)||(2870-3110)
scaffold0647 (170-300)||(7859-7989)
[»] scaffold0379 (1 HSPs)
scaffold0379 (95-291)||(6014-6210)
[»] scaffold0010 (2 HSPs)
scaffold0010 (96-308)||(3882-4094)
scaffold0010 (90-243)||(40453-40606)
[»] scaffold0001 (2 HSPs)
scaffold0001 (92-308)||(494986-495202)
scaffold0001 (50-249)||(453293-453492)
[»] scaffold0269 (1 HSPs)
scaffold0269 (217-308)||(2232-2323)
[»] scaffold0040 (1 HSPs)
scaffold0040 (92-301)||(16852-17061)
[»] scaffold0037 (1 HSPs)
scaffold0037 (161-308)||(115172-115319)
[»] scaffold1602 (1 HSPs)
scaffold1602 (50-308)||(147-405)
[»] scaffold0730 (1 HSPs)
scaffold0730 (90-308)||(121-339)
[»] scaffold0585 (1 HSPs)
scaffold0585 (90-288)||(5209-5407)
[»] scaffold0445 (1 HSPs)
scaffold0445 (90-308)||(1969-2187)
[»] scaffold0018 (3 HSPs)
scaffold0018 (50-308)||(10821-11079)
scaffold0018 (50-308)||(17013-17271)
scaffold0018 (54-303)||(24382-24631)
[»] scaffold0342 (1 HSPs)
scaffold0342 (92-308)||(15343-15559)
[»] scaffold0293 (1 HSPs)
scaffold0293 (101-249)||(14495-14643)
[»] scaffold0282 (1 HSPs)
scaffold0282 (92-308)||(14601-14817)
[»] scaffold0006 (1 HSPs)
scaffold0006 (50-249)||(103260-103459)
[»] scaffold0719 (1 HSPs)
scaffold0719 (16-78)||(4785-4847)
[»] scaffold0331 (1 HSPs)
scaffold0331 (50-308)||(16058-16315)
[»] scaffold0028 (4 HSPs)
scaffold0028 (90-308)||(48634-48852)
scaffold0028 (161-308)||(45119-45266)
scaffold0028 (164-308)||(16904-17048)
scaffold0028 (164-308)||(10442-10586)
[»] scaffold0016 (1 HSPs)
scaffold0016 (90-288)||(176464-176662)
[»] scaffold0122 (1 HSPs)
scaffold0122 (107-300)||(38085-38278)
[»] scaffold0080 (3 HSPs)
scaffold0080 (155-308)||(11424-11577)
scaffold0080 (107-298)||(50068-50259)
scaffold0080 (107-249)||(53662-53804)
[»] scaffold0058 (2 HSPs)
scaffold0058 (59-308)||(27337-27585)
scaffold0058 (128-217)||(76482-76571)
[»] scaffold0004 (1 HSPs)
scaffold0004 (50-243)||(201548-201741)
[»] scaffold0138 (1 HSPs)
scaffold0138 (92-308)||(7209-7425)
[»] scaffold0621 (1 HSPs)
scaffold0621 (107-308)||(3400-3601)
[»] scaffold0575 (1 HSPs)
scaffold0575 (50-303)||(3554-3807)
[»] scaffold0007 (1 HSPs)
scaffold0007 (107-308)||(84656-84857)
[»] scaffold0509 (1 HSPs)
scaffold0509 (92-288)||(10816-11012)
[»] scaffold0454 (1 HSPs)
scaffold0454 (107-303)||(8911-9107)
[»] scaffold0023 (3 HSPs)
scaffold0023 (101-249)||(2636-2784)
scaffold0023 (107-300)||(151086-151279)
scaffold0023 (238-308)||(54210-54280)
[»] scaffold2004 (1 HSPs)
scaffold2004 (42-308)||(881-1147)
[»] scaffold0042 (2 HSPs)
scaffold0042 (94-308)||(22673-22887)
scaffold0042 (164-249)||(38014-38099)
[»] scaffold0270 (2 HSPs)
scaffold0270 (92-249)||(5898-6055)
scaffold0270 (92-249)||(13028-13185)
[»] scaffold0309 (2 HSPs)
scaffold0309 (90-290)||(11779-11979)
scaffold0309 (92-300)||(16617-16825)
[»] scaffold0012 (1 HSPs)
scaffold0012 (92-308)||(217542-217758)
[»] scaffold0908 (1 HSPs)
scaffold0908 (107-300)||(916-1106)
[»] scaffold0540 (1 HSPs)
scaffold0540 (107-298)||(6468-6659)
[»] scaffold0029 (2 HSPs)
scaffold0029 (90-249)||(114586-114745)
scaffold0029 (161-308)||(108002-108149)
[»] scaffold0523 (1 HSPs)
scaffold0523 (90-288)||(1857-2055)
[»] scaffold0319 (1 HSPs)
scaffold0319 (42-300)||(742-1000)
[»] scaffold0102 (3 HSPs)
scaffold0102 (50-288)||(41685-41922)
scaffold0102 (263-308)||(46706-46751)
scaffold0102 (152-249)||(51527-51624)
[»] scaffold0017 (1 HSPs)
scaffold0017 (107-249)||(195624-195766)
[»] scaffold1423 (1 HSPs)
scaffold1423 (164-309)||(1576-1721)
[»] scaffold0403 (1 HSPs)
scaffold0403 (107-300)||(8348-8541)
[»] scaffold0312 (1 HSPs)
scaffold0312 (107-300)||(35-228)
[»] scaffold0100 (1 HSPs)
scaffold0100 (90-303)||(22305-22518)
[»] scaffold0054 (1 HSPs)
scaffold0054 (95-288)||(64633-64826)
[»] scaffold0108 (1 HSPs)
scaffold0108 (90-246)||(49134-49290)
[»] scaffold0026 (1 HSPs)
scaffold0026 (90-246)||(50840-50996)
[»] scaffold0190 (1 HSPs)
scaffold0190 (152-303)||(31501-31652)
[»] scaffold1486 (1 HSPs)
scaffold1486 (238-308)||(142-212)
[»] scaffold0149 (2 HSPs)
scaffold0149 (107-249)||(5487-5629)
scaffold0149 (107-249)||(9918-10060)
[»] scaffold0130 (1 HSPs)
scaffold0130 (90-288)||(8928-9126)
[»] scaffold0079 (2 HSPs)
scaffold0079 (90-288)||(2704-2902)
scaffold0079 (200-249)||(35523-35572)
[»] scaffold0335 (1 HSPs)
scaffold0335 (239-308)||(10979-11048)
[»] scaffold0089 (1 HSPs)
scaffold0089 (90-243)||(14833-14986)
[»] scaffold0431 (1 HSPs)
scaffold0431 (164-308)||(9334-9478)
[»] scaffold0192 (1 HSPs)
scaffold0192 (50-246)||(28555-28751)
[»] scaffold0049 (1 HSPs)
scaffold0049 (90-246)||(49995-50151)
[»] scaffold1830 (1 HSPs)
scaffold1830 (91-246)||(1024-1179)
[»] scaffold0261 (2 HSPs)
scaffold0261 (90-249)||(13456-13615)
scaffold0261 (90-249)||(21635-21794)
[»] scaffold0109 (1 HSPs)
scaffold0109 (161-308)||(40121-40268)
[»] scaffold0072 (1 HSPs)
scaffold0072 (152-303)||(53018-53169)
[»] scaffold0751 (1 HSPs)
scaffold0751 (90-288)||(4164-4362)
[»] scaffold0304 (1 HSPs)
scaffold0304 (90-308)||(1605-1823)
[»] scaffold0228 (1 HSPs)
scaffold0228 (42-300)||(20214-20472)
[»] scaffold0104 (2 HSPs)
scaffold0104 (90-288)||(24202-24400)
scaffold0104 (90-288)||(44537-44735)
[»] scaffold0090 (2 HSPs)
scaffold0090 (90-308)||(20817-21035)
scaffold0090 (90-308)||(24979-25197)
[»] scaffold0310 (1 HSPs)
scaffold0310 (239-308)||(13093-13162)
[»] scaffold0084 (1 HSPs)
scaffold0084 (107-308)||(7189-7390)
[»] scaffold0020 (1 HSPs)
scaffold0020 (90-303)||(99682-99895)
[»] scaffold0404 (1 HSPs)
scaffold0404 (152-308)||(6718-6874)
[»] scaffold0358 (1 HSPs)
scaffold0358 (164-300)||(8025-8161)
[»] scaffold0126 (1 HSPs)
scaffold0126 (152-288)||(42905-43041)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-52)||(13656-13707)
[»] scaffold0148 (1 HSPs)
scaffold0148 (65-308)||(965-1208)
[»] scaffold0081 (2 HSPs)
scaffold0081 (42-237)||(36065-36260)
scaffold0081 (107-237)||(20641-20771)
[»] scaffold0044 (2 HSPs)
scaffold0044 (173-308)||(16126-16261)
scaffold0044 (155-249)||(2448-2542)
[»] scaffold0034 (1 HSPs)
scaffold0034 (185-288)||(3168-3271)
[»] scaffold0865 (1 HSPs)
scaffold0865 (90-288)||(2392-2590)
[»] scaffold0324 (1 HSPs)
scaffold0324 (170-300)||(13411-13541)
[»] scaffold0222 (1 HSPs)
scaffold0222 (185-303)||(9034-9152)
[»] scaffold0215 (2 HSPs)
scaffold0215 (107-249)||(28600-28742)
scaffold0215 (173-249)||(28774-28850)
[»] scaffold0133 (1 HSPs)
scaffold0133 (90-288)||(29405-29603)
[»] scaffold0067 (3 HSPs)
scaffold0067 (155-249)||(50365-50459)
scaffold0067 (155-249)||(59399-59493)
scaffold0067 (155-249)||(65787-65881)
[»] scaffold0827 (1 HSPs)
scaffold0827 (50-123)||(5259-5332)
[»] scaffold0256 (1 HSPs)
scaffold0256 (195-308)||(23299-23412)
[»] scaffold0243 (1 HSPs)
scaffold0243 (107-308)||(25082-25283)
[»] scaffold0206 (1 HSPs)
scaffold0206 (155-248)||(25141-25234)
[»] scaffold0297 (1 HSPs)
scaffold0297 (173-249)||(7896-7972)
[»] scaffold0405 (1 HSPs)
scaffold0405 (71-210)||(566-705)
[»] scaffold0298 (1 HSPs)
scaffold0298 (90-288)||(10177-10375)
[»] scaffold0053 (1 HSPs)
scaffold0053 (185-303)||(56062-56180)
[»] scaffold0501 (1 HSPs)
scaffold0501 (200-249)||(4221-4270)
[»] scaffold0203 (1 HSPs)
scaffold0203 (152-249)||(12481-12578)
[»] scaffold0180 (1 HSPs)
scaffold0180 (116-237)||(33899-34020)
[»] scaffold0031 (1 HSPs)
scaffold0031 (152-249)||(109657-109754)
[»] scaffold0005 (1 HSPs)
scaffold0005 (203-308)||(262192-262297)
[»] scaffold0003 (1 HSPs)
scaffold0003 (203-308)||(195208-195313)


Alignment Details
Target: chr8 (Bit Score: 1172; Significance: 0; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 1172; E-Value: 0
Query Start/End: Original strand, 309 - 1612
Target Start/End: Complemental strand, 32527228 - 32525924
Alignment:
Q  309 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32527228 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 32527129  T
Q  409 attccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnnnnng 508  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||       |    
T  32527128 attccgctcaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataattttgtttcttctttcactaactccattttgttg 32527029  T
Q  509 tggagtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgaga 608  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32527028 tgtagtgtatggaacagtcaattgatgatgaatgccatcgtcatcacataatcgatcaaatgcttcagaagtatactctttgccattgtctgatctgaga 32526929  T
Q  609 gcttgaattttacaaccactttcattctccgctcttgctttga-tttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacaca 707  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32526928 gcttgaattttacaaccactttcattctccactcttgctttgaatttcctaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacaca 32526829  T
Q  708 tacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaactt 807  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32526828 tacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctgcaatgtcagtatgaattaattgcaactt 32526729  T
Q  808 cattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatg 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  32526728 cattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggccatcaagttctggaatg 32526629  T
Q  908 tcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaa 1007  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  32526628 tcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctctaacattttctttcatttgaa 32526529  T
Q  1008 aagcaatttgctcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagct 1107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32526528 aagcaatttgctcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagct 32526429  T
Q  1108 ttcattttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaac 1207  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32526428 ttcattttcgaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaatttaac 32526329  T
Q  1208 tttgtacctgaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccattcccaacccgaacttttgttgagtttgcattgctta 1307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  32526328 tttgtacctgaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccatttccaacccgaacttttgttgagtttgcattgttta 32526229  T
Q  1308 gttccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacatgttgcaac 1407  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32526228 gttccctgattaaatccttattatgtgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacatgttgcaac 32526129  T
Q  1408 gaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaataactgcttcatgccccatttga 1507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  32526128 gaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaatatcagcttcatgccccatttga 32526029  T
Q  1508 ttacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggataagattttctttgaa 1607  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  32526028 ttacacttggtacacttagcatcaggtcttctccaacatcttaagggtggatgacctttctttccatagtgttgacatggaggataagattttcttcgaa 32525929  T
Q  1608 ttaca 1612  Q
    |||||    
T  32525928 ttaca 32525924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 16875566 - 16875873
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875566 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 16875665  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16875666 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16875765  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  16875766 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 16875865  T
Q  301 tttccttg 308  Q
    ||||||||    
T  16875866 tttccttg 16875873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 21848808 - 21849115
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21848808 gattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 21848907  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21848908 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 21849007  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || ||||||||||||||||||||    
T  21849008 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttggttgaaggaagtgag 21849107  T
Q  301 tttccttg 308  Q
    ||| ||||    
T  21849108 ttttcttg 21849115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 20650827 - 20651133
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650827 attagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 20650926  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| || ||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  20650927 gtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaatctgagga 20651026  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
     |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||    
T  20651027 ggagcatgccgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagatttggttgaaggaagtgagt 20651126  T
Q  302 ttccttg 308  Q
    |||||||    
T  20651127 ttccttg 20651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 219; E-Value: 1e-119
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 22436612 - 22436306
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  22436612 attagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaatgcgccag 22436513  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  22436512 gtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 22436413  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
      |||||||||||||||||||||| ||||||| |||||| || ||||| ||||||||||  ||||||||||||||||| |||||||||  ||||||||||    
T  22436412 gaagcatgctgagcatttgaggatagtgttgcgagtcttaaaggagaatcagttatgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagt 22436313  T
Q  302 ttccttg 308  Q
    |||||||    
T  22436312 ttccttg 22436306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 23155513 - 23155817
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | | ||||||| |    
T  23155513 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaatgcgcta 23155610  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  23155611 ggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaagtctgagg 23155710  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | || |||| |||||||||||||||||||||| |||||||||| || || ||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  23155711 aggatcatgttgagcatttgaggattgtgttgtaagtcttgaaggataatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgag 23155810  T
Q  301 tttcctt 307  Q
    |||||||    
T  23155811 tttcctt 23155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 197; E-Value: 1e-106
Query Start/End: Original strand, 4 - 308
Target Start/End: Original strand, 21195014 - 21195317
Alignment:
Q  4 tagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggt 103  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  21195014 tagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataatgtgccaggt 21195113  T
Q  104 gtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaag 203  Q
      ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||| |||||||| |    
T  21195114 a-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaatctgaggagg 21195212  T
Q  204 agcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||| |||| ||||||||| ||||||| |||||    
T  21195213 agcatgctgagcatttgaggattgtgttgcaagtattgaaggagaaccagttatgtgctaagttgtctaagagtgagttttggttgcaggaagtaagttt 21195312  T
Q  304 ccttg 308  Q
    |||||    
T  21195313 ccttg 21195317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 166; E-Value: 4e-88
Query Start/End: Original strand, 7 - 308
Target Start/End: Complemental strand, 23902468 - 23902167
Alignment:
Q  7 agtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtc 106  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  23902468 agtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtc 23902369  T
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    || ||||| || |||||||||||||||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||||||||||| |||||| ||||    
T  23902368 ttcatggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagc 23902269  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    |||||||||||||||||||| ||||||  |||||||| || ||  |||| ||||  |||| ||| ||||| ||  ||||||||   ||||||||||||||    
T  23902268 atgctgagcatttgaggattatgttgcgtgtcttgaaggaaaattagttgtgtgctaagtggtcgaagtgcgagctttggttgcgagaagtgagtttcct 23902169  T
Q  307 tg 308  Q
    ||    
T  23902168 tg 23902167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16414398 - 16414302
Alignment:
Q  4 tagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||| |||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16414398 tagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 20394695 - 20394911
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| || ||||| |||||||| ||||||||| | || |||||| ||||| | || || ||||| || |||||||| || ||||||||| | || || |    
T  20394695 aatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttagatcgctttgttgttgtgttcattgacgatattttgatatactcta 20394794  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||||||| ||||| ||||| |||||||||| |||||| ||||||||  ||||||||||  |||||| ||  |||||||| ||||||||||| ||||||||    
T  20394795 agtctgaagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaa 20394894  T
Q  292 ggaagtgagtttccttg 308  Q
      | |||||||| ||||    
T  20394895 taaggtgagttttcttg 20394911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 50 - 308
Target Start/End: Complemental strand, 23887289 - 23887027
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || |||||||| |||||||| || || ||  |||||||||||| ||| ||||||||||||||||||   || |||||| ||||| | || |    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaaga----gcatgctgagcatttgaggattgtgttgcaagtcttgaaag 245  Q
    | || ||||| |||||||| |||||||||||| | || || |||||| | |||||    | ||| ||||||||||| |||||| ||||||||  |||| |    
T  23887189 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtctaaagaagaacatgtatgttgagcatttgaagattgttttgcaagtgctgaagg 23887090  T
Q  246 agaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||  |||||| ||  |||||||| ||||||||||| | |||||| || |||||||| ||||    
T  23887089 agaagaagttatatgccaagttgtcaaagtgtgaattctagttgaatgaggtgagttttcttg 23887027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 22422454 - 22422670
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||| || ||||| |||| ||| ||||||| |||||| |||||||| |||||||||||  |  | | ||  || || || ||||||||||| ||||||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattatggttgaa 22422653  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||||||||    
T  22422654 agaggtgagtttccttg 22422670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 96 - 308
Target Start/End: Complemental strand, 22988945 - 22988733
Alignment:
Q  96 cgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtc 195  Q
    ||||| |||| |||||||| |||||||||   || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | ||||| ||| |    
T  22988945 cgccacgtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagac 22988846  T
Q  196 tgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaa 295  Q
    ||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  || | | ||  || ||||| ||||||||||| |||||||| ||     
T  22988845 tgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagag 22988746  T
Q  296 gtgagtttccttg 308  Q
    |||||||| ||||    
T  22988745 gtgagttttcttg 22988733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 22376015 - 22376172
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    || |||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 22376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 5e-23
Query Start/End: Original strand, 92 - 308
Target Start/End: Complemental strand, 23652260 - 23652044
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| || ||||| |||||||||||||||||| | || |||||| | | | |||| || || ||||| || ||||| ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| || || |||||||||||||||| |||||| || ||||| |||||||||||  || ||| ||  || ||||||||||||||||||||||||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaa 23652061  T
Q  292 ggaagtgagtttccttg 308  Q
     || || ||||| ||||    
T  23652060 agaggtaagttttcttg 23652044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 22131672 - 22131819
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |  | | ||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatg 22131771  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||||||||| ||||| ||||    
T  22131772 ctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttg 22131819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 31569402 - 31569620
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  31569402 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 31569501  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    |||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||| | ||  || ||||| || ||||| |||||| |     
T  31569502 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 31569601  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||||||||    
T  31569602 agtgaagtgagtttccttg 31569620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 17672600 - 17672796
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  17672600 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 17672699  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  17672700 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 17672796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 20016840 - 20017036
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  20016840 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 20016939  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  20016940 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 20017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 20008481 - 20008679
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| |  ||||||||  |  | |||||    
T  20008481 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttagtgatgatatcctaatttattc 20008580  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||| | ||  |||||||| || ||||||||||||||    
T  20008581 taagaatgaagaagagcatgcagagcatatgaagattgtgttgcaactgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtt 20008679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 18858781 - 18858580
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |    
T  18858781 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaac 18858682  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||||||||||| ||    
T  18858681 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttct 18858582  T
Q  307 tg 308  Q
    ||    
T  18858581 tg 18858580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 19114801 - 19114698
Alignment:
Q  200 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtga 299  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||    
T  19114801 gaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtga 19114702  T
Q  300 gttt 303  Q
    ||||    
T  19114701 gttt 19114698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 19869989 - 19869818
Alignment:
Q  15 cggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatgga 114  Q
    ||||||||||||| || || || ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || ||||||||    
T  19869989 cggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatgga 19869890  T
Q  115 gtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgta 186  Q
    ||| ||||| ||||| || ||||| ||| | || |  || || || || ||||| |||||||||||||||||    
T  19869889 gtatatgaacagaattttccatccgtatttagatcagttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 21927649 - 21927450
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  21927649 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 21927550  T
Q  190 gaagtctgaggaagagca-tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| |||||||| ||| |||||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| |||||    
T  21927549 taagactgaagaagagcattgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattctggtt 21927450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 291
Target Start/End: Original strand, 22246995 - 22247194
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||| | | | | |||| |||||  |||| |||||||| || ||||||||| | || || |    
T  22246995 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcctgcgtttttggatcgtttcatggttgtgttcatcgacgatattttgatatactcca 22247094  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||  ||| | ||| |||| ||||||||||  |||||| ||||||||  ||||||||||  |||||| ||  || || || ||||||||||| ||||||||    
T  22247095 agattgaaggagaacatgttgagcatttgtagattgttttgcaagtgctgaaagagaagaagttatatgctaaattttcaaagtgtgaattctggttgaa 22247194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 21253148 - 21252955
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || | ||| || || || |||||||||||| | || || |||||||| ||||| |    
T  21253148 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgaggttgtttttatcgatgatattttgatttactccaagtctgaagaagaac 21253049  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | ||  ||||||| |||||||||||  || | | ||  || ||||||||||| ||||| |||||||| ||||||||    
T  21253048 atgctgagcatttgaagctggttctgcaagtattgaaagagaagaagctttatgcgaaattgtctaagtgagaattctggttgaaagaagtgag 21252955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 28983132 - 28982979
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28983132 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28983033  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  28983032 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28982979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 28988351 - 28988198
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28988351 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28988252  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  28988251 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28988198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 22118752 - 22118948
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  22118752 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 22118851  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
     |||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||| ||| || ||||||||    
T  22118852 gtgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttt 22118948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 22127536 - 22127732
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  22127536 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 22127635  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
     |||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||| ||| || ||||||||    
T  22127636 gtgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttt 22127732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 27356757 - 27356598
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  27356757 ctaatgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 27356658  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
     |||  ||| || |||||||| |||||| |||| ||||| |||||||| || ||||||||    
T  27356657 caagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttaaaagagaa 27356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 19861656 - 19861458
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||| |||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  19861656 ctaatgcgcctggtgtgtttatgaagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 19861557  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||| ||||| |||||| ||| ||||| ||||||||| |||||| | ||  |||| | ||  |||||||| || ||||||||||||||    
T  19861556 taagaatgaagaagaacatgcagagcatctgaagattgagttgcaagtgttgaaataaaagaagttgtatgccaagttgtccaaatgtgaattttggtt 19861458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 21323839 - 21324056
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| ||| || | |||||    
T  21323839 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttatcgatgacattctgatctattc 21323938  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||| | ||  |||||||| |||||||| || |||||     
T  21323939 aaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagttgtatgctaagttgtcgaagtgtgagttctggtta 21324037  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  21324038 agtgaagtgagttttcttg 21324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 21392501 - 21392631
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | || ||| ||||    
T  21392501 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21392600  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||| ||||| |||||||| ||||||||    
T  21392601 ctaagtgcgaattctggttgaaagaagtgag 21392631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 21786995 - 21787125
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | || ||| ||||    
T  21786995 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21787094  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||| ||||| |||||||| ||||||||    
T  21787095 ctaagtgcgaattctggttgaaagaagtgag 21787125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1114 - 1172
Target Start/End: Complemental strand, 26765070 - 26765012
Alignment:
Q  1114 ttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgat 1172  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||    
T  26765070 ttcaaacaacactttgtaacctttttcaagtaattgcccaacactcaacagattttgat 26765012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 6605879 - 6605726
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  6605879 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 6605780  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| ||||| || |||||    
T  6605779 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaggtgttgaa 6605726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 15535499 - 15535386
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||    
T  15535499 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 15535400  T
Q  295 agtgagtttccttg 308  Q
    ||| ||||| ||||    
T  15535399 agtaagttttcttg 15535386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 19482689 - 19482842
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |      
T  19482689 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 19482788  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  19482789 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttg 19482842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 19980186 - 19980029
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || || ||||||||| | || || |    
T  19980186 aatgcgcctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 19980087  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    || |||| ||||| ||||||||| || ||| |||||| |||||||| |||||||||||    
T  19980086 agactgaagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaa 19980029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 20390292 - 20390167
Alignment:
Q  118 catgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcat 217  Q
    |||||||||||| || ||| |||   |||| || |||||||| ||||| || ||||| || ||| | ||||| ||| |||| ||||||||||| ||||||    
T  20390292 catgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcat 20390193  T
Q  218 ttgaggattgtgttgcaagtcttgaa 243  Q
    || | ||||||||||||||| |||||    
T  20390192 ttaaagattgtgttgcaagtgttgaa 20390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 308
Target Start/End: Original strand, 30311809 - 30311922
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||    
T  30311809 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 30311908  T
Q  295 agtgagtttccttg 308  Q
    ||| ||||| ||||    
T  30311909 agtaagttttcttg 30311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 22373152 - 22372996
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || ||||||||||||||| |||| || ||| ||||||||||    |||||||| ||||| |  ||||||||  |  | |||||    
T  22373152 ctaatgcgcctggtgtgttcatggagtacatgaattgaattttccatgcttatctggataaatttgtggttgtgtttactgatgatatcctaatttattc 22373053  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     |||  ||| ||||| ||||| |||||| | | ||||||||||||||| ||||||||    
T  22373052 taagaatgaagaagaccatgcagagcatcttaagattgtgttgcaagtgttgaaaga 22372996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 32602295 - 32602207
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 32602207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 4984282 - 4984116
Alignment:
Q  71 gtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatgg 170  Q
    |||||||| || || ||| |||| ||||| ||||| |||||||||||||||||| |||| || ||| ||| ||| ||    ||||| |||||||||||      
T  4984282 gtgatgcctttcggtgtaactaaagcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctagataagtttgttgtggtgttcatta 4984183  T
Q  171 atgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 237  Q
    ||||||  ||| | ||||| |||   |||||||||||||| |||||| |||| || || ||||||||    
T  4984182 atgataccttgatttattccaagaacgaggaagagcatgcagagcatctgagaatagtattgcaagt 4984116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 16269795 - 16269937
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||| | ||||| |||  ||| |    
T  16269795 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgttcattgatgatatcttgatttattccaagaatgaag 16269894  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
    | |||||||| |||||  |||| ||||| |||||||| |||||    
T  16269895 aggagcatgcagagcacctgagaattgtattgcaagtgttgaa 16269937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1139 - 1217
Target Start/End: Complemental strand, 19966519 - 19966441
Alignment:
Q  1139 tcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctg 1217  Q
    ||||||||||| || ||||| ||||| || |||||||| ||||| || || || ||||||||||||| |||||||||||    
T  19966519 tcaagtaattgacccacactcaacaagttttgatcaatctcaggtacatataaaacatcagaaattagctttgtacctg 19966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1139 - 1217
Target Start/End: Original strand, 21026477 - 21026555
Alignment:
Q  1139 tcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctg 1217  Q
    ||||||||||| || ||||| ||||| || |||||||| ||||| || || || ||||||||||||| |||||||||||    
T  21026477 tcaagtaattgacccacactcaacaagttttgatcaatctcaggtacatataaaacatcagaaattagctttgtacctg 21026555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 22041983 - 22041889
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| ||||| || || ||||||||| |||| || ||| |||| ||||| |||||||||||| ||| |||||| |||||||  |||||||||||    
T  22041983 gtggttgtgtttatcgacgatattttgatgtactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagcgttgaaagagaa 22041889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 23657148 - 23656950
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| || || ||||||||||| |||||  |||| || ||| ||| ||||||    ||| |||| || || || ||||||||| |  | |||||    
T  23657148 ctaatgcgcctggcgtgtttatggagtatatgaaccgaattttccatgcttttctggataaatttatggttgtatttattgatgatattctaatatattc 23657049  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||| | ||  |||||||| |||||||| || |||||    
T  23657048 taagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaagttgtcaaagtgtgagttatggtt 23656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1325 - 1368
Target Start/End: Complemental strand, 18012170 - 18012127
Alignment:
Q  1325 ttattatatgtcatgtggttggtacaaccactatcaatcagcca 1368  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  18012170 ttatcatatgtcatgtggtttgtacaaccactgtcaatcagcca 18012127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 18013097 - 18012996
Alignment:
Q  399 gtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactc 498  Q
    |||||||||| ||| ||||||||||| || || || | |||||||||||  |||||||  | |||||||| ||   |||| ||||| |||||||||||||    
T  18013097 gtgtttgccgcttctgcccaaaattgtttaggcaattccttctcatgcaaaatacatctagccatctccattactgatctatttctcctttcactaactc 18012998  T
Q  499 ca 500  Q
    ||    
T  18012997 ca 18012996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 1129; Significance: 0; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 1129; E-Value: 0
Query Start/End: Original strand, 309 - 1609
Target Start/End: Original strand, 6837351 - 6838652
Alignment:
Q  309 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 408  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  6837351 ttcagggagggtttataaccataccaagcctcaaatggtgtcttatcctttattgctcttgtaggaagcctattttgcaaataaacagcagtgtttgtcg 6837450  T
Q  409 attccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnnnnng 508  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |       |    
T  6837451 attccgcccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatccgtttcttctttcactaactcaattttgttg 6837550  T
Q  509 tggagtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgaga 608  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6837551 tggagtgtatggaacaatcaattgatgattaatgccagcgtcatcacagaatcgatcaaatgcttcagaagtatactctttgtcattgtctgatctgaga 6837650  T
Q  609 gcttgaattttacaaccactttcattctccgctcttgctttga-tttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacaca 707  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6837651 gcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttgtgccacctctgacttgtgcttcagaaagaaaatccaacaca 6837750  T
Q  708 tacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaactt 807  Q
    ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6837751 tacaggtaaaatcatcaatgaatatagcataataaagactgtcattcaaagaagatgttctttgtgggcctgcaatgtcagtatgaattaattgcaactt 6837850  T
Q  808 cattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatg 907  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  6837851 ttttgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaacttacaagtcttgcaatttgaaatatggtcatcaagttctggaatg 6837950  T
Q  908 tcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaa 1007  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  6837951 tcatttgccatctccttggatttcaattgcagcaaaccttgatgattataatgcccgagccttttgtgccataagtttgtgatattttctttcatttgaa 6838050  T
Q  1008 aagcaatttgctcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagct 1107  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6838051 aagcaatttgctcttcctccaacggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagct 6838150  T
Q  1108 ttcattttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaac 1207  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6838151 ttcattttcgaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaac 6838250  T
Q  1208 tttgtacctgaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccattcccaacccgaacttttgttgagtttgcattgctta 1307  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  6838251 tttgtaccagaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccatttccaacccgaacttttgttgagtttgcattgatta 6838350  T
Q  1308 gttccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacatgttgcaac 1407  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6838351 gttccctgaaaaaatccttattatgtgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacatgttgcaac 6838450  T
Q  1408 gaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaataactgcttcatgccccatttga 1507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6838451 gaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaataacagcttcatgccccatttga 6838550  T
Q  1508 ttacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggataagattttctttgaa 1607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  6838551 ttacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacgtggaggataagattttcttcgaa 6838650  T
Q  1608 tt 1609  Q
    ||    
T  6838651 tt 6838652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 312 - 1184
Target Start/End: Original strand, 8975915 - 8976787
Alignment:
Q  312 agggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgatt 411  Q
    ||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||| ||||||||||||| ||||||||  || ||||||| ||||    
T  8975915 agggagggtttttaaccataccaagcctcaaatgatgttttatcctttactactcttgtaagaagcctattttgtaaataaactacaatgtttgctgatt 8976014  T
Q  412 ccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnnnnngtgg 511  Q
    |||||||||| || ||  | |||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| |       ||||    
T  8976015 ccgcccaaaactggttgagcaagttcttctcatgcaacatacatcgg-tcatcttcaatataaatatgtttcttctttcactaactcgattttattgtgg 8976113  T
Q  512 agtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgagagct 611  Q
    ||||||||||| ||| || | |||||||||| ||||||||| |||||||||||||||||||    ||| |||||||||  |||||| |||| ||||||||    
T  8976114 agtgtatggaatagttaactaatgatgaatgtcagcgtcattacataatcgatcaaatgct----aagcatactcttttccattgtttgatatgagagct 8976209  T
Q  612 tgaattttacaaccactttcattctccgctcttgctttgat-ttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacacatac 710  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||| |||| |||||||||||||| || ||||||||||    
T  8976210 tgaattttacaaccactttcattctccactcttgctttgaagttccataatacttgtgttacctcttacttttgcttcagaaagaagatacaacacatac 8976309  T
Q  711 gggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagat----gttctttgtgggcctgcaatgttagtatgaattaattgcaact 806  Q
    | |||| ||||||||||| ||||||||||| |||||||||| |||| |||| |    |||||||||||  || ||||||||||||||||||||||||| |    
T  8976310 gagtaatatcatcaatgagtatagcataatgaagactaccaatcaatgaaggtcggtgttctttgtggttctacaatgttagtatgaattaattgcaatt 8976409  T
Q  807 tcattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaat 906  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  8976410 tcattgttgctttccatgttgtctttggaaatggcttcctatttttctttccaaactaacaagccttgcaatttgaaatatggtcatcaagttcttgaat 8976509  T
Q  907 gtcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttga 1006  Q
    | |||||||||||||||||||||||||||| ||||  |||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||    
T  8976510 ggcatttgccatctccttggatttcaattggagcaggccttgatgatgataattcctgagccttttgtgccacaagtatgtgacattttctttcatttga 8976609  T
Q  1007 aaagcaatttgctcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagc 1106  Q
    |||||| ||||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||| |||||||||||| |||||||| |||    
T  8976610 aaagcagtttgcccctcctccaatggatttagagaaaaactatttcatctcatttttactttgaacatgtctttaccatcactatctataatcaagtagc 8976709  T
Q  1107 tttcattttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcaggga 1184  Q
    || |  |||| ||||| |||||||||||||||| || ||||| | |||||||||||||||| |||||| |||||||||    
T  8976710 ttacgctttcgaacaaaactttataacctctttgaattaattcctcaacacttaacaaattatgatcattttcaggga 8976787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 654 - 1603
Target Start/End: Original strand, 28599508 - 28600457
Alignment:
Q  654 tccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccatt 753  Q
    |||| |||||||||||| |||| |||||| |||| | |||||   || |||||||||| ||||||||| |||||||||||| ||||||||||||  ||||    
T  28599508 tccagaatacttgtgcttcctccgacttgagctttataaaga---tctaacacatacgagtaaaatcaacaatgaatatagtataataaagactgtcatt 28599604  T
Q  754 caaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaacttcattgttgctctccaagttgtctttggaaatggcttcctgctttgc 853  Q
    |||||    |||||||  |||||||||||| | |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| | ||||    
T  28599605 caaagg---tgttcttcatgggcctgcaatatcagtatgaattaatttcaacttctttgttgctctccatgttgtctttggaaatggcttcctacattgc 28599701  T
Q  854 tttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatgtcatttgccatctccttggatttcaattgcagcaaaccttgatgat 953  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||| ||| ||||||||||| | ||||||||  || |||||||    
T  28599702 tttccaaactgacaagccttgcaatttgaaatatggtcaccaagttctggaaggtcgtttgtcatatccttggattttagttgcagcaggccctgatgat 28599801  T
Q  954 gataatgcccgagccttttgtgccataagtctgtgacattttctttca-tttgaaaagcaatttgctcctcctccaatggatttagagcaaaactttttc 1052  Q
    |||| || | ||||||||||||||| || ||||| ||||||||||||| ||||||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  28599802 gatattgtctgagccttttgtgccacaaatctgttacattttctttcattttgaaaactaattttctcctccttcaatagatttagagcaaaactttttc 28599901  T
Q  1053 ctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagctttcattttcaaacaacactttataacctctttcaagtaattgccc 1152  Q
    |||||||||||||| ||||||  ||||| |||| || ||| ||||||||| | ||||   |||||||||| |||||||| ||  ||||||  ||||||||    
T  28599902 ctctcatttttactctgaaaacatctttaccattaccatcgttaatcaagaatctttttgtttcaaacaaaactttatagcccttttcaataaattgccc 28600001  T
Q  1153 aacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctgaataggttgagattgctattgttccttttcctttc 1252  Q
     |||||| | | ||| | ||||||||||||||||||||||||||| | ||| |||||||||  ||||||||||| ||||||||||||||||||  ||||     
T  28600002 gacacttcaaatatttttatcaatttcagggacgtacaacacatcggcaatgaactttgtaattgaataggttgcgattgctattgttcctttaactttt 28600101  T
Q  1253 acagcaatgtaattgccattcccaacccgaacttttgttgagtttgcattgcttagttccctgaataaattcttattatatgtcatgtggttggtacaac 1352  Q
    ||| || | || ||| |||| |||| ||||||||||  |||  |||||  | ||| || ||||||||||| ||| |||| |||||||||||| |||||||    
T  28600102 acaacagtatagttgtcatttccaa-ccgaacttttaatgaacttgcaccgtttactttcctgaataaatccttgttatgtgtcatgtggttagtacaac 28600200  T
Q  1353 cactatcaatcagccaattctcacttgattcgatgctagagaaacatg----ttgcaacgaataagtga---tcctcctcttcctcttgatcaacaacct 1445  Q
       | ||||| ||||||||||||||||||||||| |||||||||||||    |||||  ||| ||||||   ||||||||||| |||||||| ||| |      
T  28600201 tgttgtcaattagccaattctcacttgattcgattctagagaaacatgcattttgcattgaacaagtgatcctcctcctcttcttcttgatc-acatcac 28600299  T
Q  1446 ttgcctcatcattatgttgttgattcctatttttacaaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaaca 1545  Q
    ||||||||||| ||||||||||||||||||| | | | ||||  |||||||| | ||||||| || || | || ||||||||||   || ||||||||||    
T  28600300 ttgcctcatcactatgttgttgattcctattctgaaatataagagcttcatgtctcatttgactagacatagtgcacttagcatttcgttttctccaaca 28600399  T
Q  1546 tctaaagggtggatgacctttctttccacagtgttgacatggaggataagattttctt 1603  Q
    | |||| | |||||||| |||||||||||| | |||  | || |||||||||||||||    
T  28600400 tttaaatgatggatgacatttctttccacaatattggaaaggtggataagattttctt 28600457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 312 - 1154
Target Start/End: Complemental strand, 6386294 - 6385454
Alignment:
Q  312 agggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgatt 411  Q
    ||||||||||| ||| ||||||  ||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  6386294 agggagggtttgtaatcataccgggcctcaaatggtgtcatatcatttattgctcttgtaggaagcctattttgcaaataaacaac-gtgttcgccgatt 6386196  T
Q  412 ccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnnnnngtgg 511  Q
    | |||||||||| ||| |  ||||||||  |||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||| |       ||||    
T  6386195 ctgcccaaaatttcttggtcaagttcttaccatgtaacatacattgggtcatctccaatataaatttgtttcttctttcactaactctattatgttgtgg 6386096  T
Q  512 agtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgagagct 611  Q
    | ||||| |||| ||| | ||||||||||| | | | |||||||| ||||||||||||||||||||| |||||| |||| | || || ||||| |||| |    
T  6386095 aatgtattgaaccgtccaatgatgatgaattctaacttcatcacaaaatcgatcaaatgcttcagaa-tatactatttgccgttatcagatctaagagtt 6385997  T
Q  612 tgaattttacaaccactttcattctccgctcttgctttg--atttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacacata 709  Q
    ||||| |||||||||   ||||||||| |||  | |||   ||| | ||||||||||||||||||  |  |||||||| |||||||| ||||||||||||    
T  6385996 tgaatgttacaaccatcctcattctccactccagattttgaattgctaaaatacttgtgctacctaaggattgtgctttagaaagaagatccaacacata 6385897  T
Q  710 cgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaacttca 809  Q
    |   |||||||||||||| ||||| |||||||| ||||| ||| |||||||| ||||||||| || | |||||||  ||||| |||||||| || ||||     
T  6385896 caactaaaatcatcaatgcatataacataataatgactatcatgcaaagaaggtgttctttgcggacatgcaatgcaagtataaattaattacagcttct 6385797  T
Q  810 ttgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatgtc 909  Q
    |||||| ||| || |||||||||| |||  ||||  || |||| |||||||| | |||||||||||||||||||| ||||| |||||||| || || |||    
T  6385796 ttgttgttctgcatgttgtctttgaaaacagctttatgatttgttttccaaattaacaagccttgcaatttgaaacatggtcatcaagttatgcaaggtc 6385697  T
Q  910 atttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaaaa 1009  Q
    |||| |||||||   |||||| || ||||  |  ||| ||||||||||| |||| |||||||| ||||| || ||||||||||||||||||||||| |||    
T  6385696 attttccatctc---ggattttaactgcattatccctggatgatgataacgcccaagccttttatgccacaaatctgtgacattttctttcatttgtaaa 6385600  T
Q  1010 gcaatttgc---tcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagc 1106  Q
     ||||||||   ||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |   ||||||||||||||||||||| || ||||    
T  6385599 ccaatttgcccatcctcctccaatggatttagaacaa--ctttttcctctcatttttactttgaaagtacatttgccatcactatctttaattaaacagc 6385502  T
Q  1107 tttcattttcaaacaacactttataacctctttcaagtaattgcccaa 1154  Q
    |||||||||||||||| |||||||| ||  |||||| ||||| |||||    
T  6385501 tttcattttcaaacaaaactttatatcccttttcaattaatttcccaa 6385454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20829492 - 20829799
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20829492 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 20829591  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20829592 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 20829691  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  20829692 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 20829791  T
Q  301 tttccttg 308  Q
    ||||||||    
T  20829792 tttccttg 20829799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 264; E-Value: 1e-146
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 20927313 - 20927006
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927313 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 20927214  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20927213 ggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 20927114  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||| ||||||||||| |||||||||||||||||||     
T  20927113 aagagcatgatgagcatttgaggattgtgttgcaagtcttgaaggagaatcagttatgtgctaagttatctaagtgtgagttttggttgaaggaagtgat 20927014  T
Q  301 tttccttg 308  Q
    ||||||||    
T  20927013 tttccttg 20927006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 1187 - 1609
Target Start/End: Original strand, 8976984 - 8977393
Alignment:
Q  1187 tacaacacatcagaaattaactttgtacctgaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccattcccaacccgaactt 1286  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| |   |||||||||||| ||||||| ||| |||| ||||||| |||||    
T  8976984 tacaacacatcagaaattaattttgtacctgaataggttgagatttctattggtatgtttcctttcacatcaatgtagttgtcatttccaacccaaactt 8977083  T
Q  1287 ttgttgagtttgcattgcttagttccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgat 1386  Q
    | | ||||||||||||||||| ||  || ||||||| |||      |||||||||||| ||||||||||| |||||||||||||||||| |||||| |||    
T  8977084 tcgatgagtttgcattgcttatttttctaaataaat-ctt------tgtcatgtggttagtacaaccactgtcaatcagccaattctcatttgatttgat 8977176  T
Q  1387 gctagagaaacatgttgcaacgaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaata 1486  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8977177 gctagagaaacatgttgcaacgaataagtgatcctcatcttccttttgatcaacaacctttgcctcatcaatatcttgttgattcctatttttacaaata 8977276  T
Q  1487 actgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatg 1586  Q
    ||  ||||||||||||||||||||      || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||    
T  8977277 acaacttcatgccccatttgatta------gtgcacttagcatcaggtcttctccaacatctaaagggtggatgacctttttttccacaatgttgaaatg 8977370  T
Q  1587 gaggataagattttctttgaatt 1609  Q
    | | |||||||||||||||||||    
T  8977371 gcgtataagattttctttgaatt 8977393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 41215956 - 41216262
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  41215956 gattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaatgcgcca 41216055  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || ||| | || |||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||    
T  41216056 ggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaagtctgagg 41216155  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||||| ||||||||| |||||   |||||||   |||||||| |||||||| |||||||||  |||||||||    
T  41216156 aggagcatgctgagcatttgaggattgtgttgcgagtcttgaaggagaattggttatgttctaagttgtcgaagtgtgagttttggttgcgggaagtgag 41216255  T
Q  301 tttcctt 307  Q
    |||||||    
T  41216256 tttcctt 41216262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 8e-71
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 20527312 - 20527148
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20527312 gattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 20527213  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt 165  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527212 ggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt 20527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 3e-58
Query Start/End: Original strand, 1493 - 1612
Target Start/End: Original strand, 2797341 - 2797460
Alignment:
Q  1493 tcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggat 1592  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2797341 tcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggat 2797440  T
Q  1593 aagattttctttgaattaca 1612  Q
    ||||||||||| ||||||||    
T  2797441 aagattttcttcgaattaca 2797460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 1e-51
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 21200998 - 21201278
Alignment:
Q  20 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtaca 119  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| ||||| || |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  120 tgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcattt 219  Q
    |||||||||||||||||||||||||| || | ||||||| ||  || || |||||||| ||||||||||||||||  ||||| ||||||| | ||||| |    
T  21201098 tgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatct 21201197  T
Q  220 gaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||   |||||| || ||  |||| | ||  || ||||| ||||||||||||||| || ||||||||||    
T  21201198 gaggattgtgttgcataccttgaaggataagaagttgtttgctaacttgtcgaagtgtgaattttggctgcaggaagtgag 21201278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 1300 - 1609
Target Start/End: Complemental strand, 6385373 - 6385067
Alignment:
Q  1300 attgcttagttccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacat 1399  Q
    ||||||||||| |||||||| ||  || |||| | |||||||||| ||||| ||| | |||||||  ||||||||||||||||||||| |||||||||||    
T  6385373 attgcttagtttcctgaatagatcgttgttatgtttcatgtggttagtacacccattgtcaatcaatcaattctcacttgattcgatgttagagaaacat 6385274  T
Q  1400 gttgcaacgaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctatttttacaaataactgcttcatgcc 1499  Q
    || |||| ||| |||| | ||| |||||| ||||| |||| || |||| |||  ||| || ||||||||||| |||||| |||  |||  ||||||||||    
T  6385273 gtcgcaatgaacaagtcacccttctcttcttcttgttcaataatcttttcctg-tcactacgttgttgattcttattttcacatgtaatagcttcatgcc 6385175  T
Q  1500 ccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggataagattt 1599  Q
    | ||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||| |||||||||||||  |||||| |||| ||| |  |||||||    
T  6385174 ctatttgattacacttggtgcgcttaacatcaggtcttctccaacctctaaatggtgggtgacctttctttc--cagtgtagacaaggaagtgaagattt 6385077  T
Q  1600 tctttgaatt 1609  Q
    |||| |||||    
T  6385076 tcttcgaatt 6385067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  102 gtgtctt 108  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 26402947 - 26402765
Alignment:
Q  318 ggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgattccgccc 417  Q
    ||||| || ||||||||||| |||||||| |||| || |||||||||  |||| |||||||| ||||| | | |||| |  || ||||||| ||| ||||    
T  26402947 ggtttgtatccataccaagcttcaaatggtgtctgattctttactgcagttgtgggaagcctgttttgaagaaaaactgatgtatttgccgcttcagccc 26402848  T
Q  418 aaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactcca 500  Q
    | || |  |||||||||||||||||||||| ||| |||| ||||||||||| |||  |||| |||||||||||||||||||||    
T  26402847 agaacttttttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactcca 26402765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35930925 - 35930987
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatga 63  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35930925 gattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 21839103 - 21838907
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  21839103 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 21839004  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  21839003 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21838907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 33389235 - 33389431
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  33389235 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 33389334  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  33389335 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 33389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 51331699 - 51331895
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  51331699 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 51331798  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| |||||| ||| |||||| |||||||| |||||||||||  |||| | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  51331799 atgcggagcatctgaagattgttttgcaagtgttgaaagagaagaagttttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 51331895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 20140236 - 20140043
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| |||||| |||| || ||||| |||||||||||| | || || ||| |||| ||||| |    
T  20140236 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttttggttgttttcattgatgatattttgatttactccaagactgaagaagaac 20140137  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||| || |||| |||||| |||||||| |||||||| ||  || | | ||  || ||||||||||||||||| ||||||||  |||||||    
T  20140136 atgctgatcacttgaagattgttttgcaagtgttgaaagaaaagaagctctatgctaaattgtctaagtgtgaattctggttgaaaaaagtgag 20140043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 48 - 297
Target Start/End: Complemental strand, 21751152 - 21750903
Alignment:
Q  48 ggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctgga 147  Q
    |||||||||| |||||||||   || ||||| ||||| ||  ||||||| |  || || |||||||||||||||||| | || |||||| | | | ||||    
T  21751152 ggtatggacattatgagtataaagttatgccttttggtgttactaatgctcttggagtatttatggagtacatgaatcgcatctttcatgcatttttgga 21751053  T
Q  148 ccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagag 247  Q
     ||||| ||||| || ||||| |||||||||||  | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||| ||    
T  21751052 tcgtttcgtggttgttttcattgatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaaaaag 21750953  T
Q  248 aaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagt 297  Q
    ||  || | | ||  || ||||||||||||||||| ||||| || |||||    
T  21750952 aagaagctttatgctaaattgtctaagtgtgaattctggttaaaagaagt 21750903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 21832455 - 21832259
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  21832455 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 21832356  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  21832355 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 102 - 308
Target Start/End: Original strand, 21862574 - 21862780
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    |||| ||||||||| |||||||| | || |||||| | | | |||||||||| ||||| || || || ||||| |||||  | || || ||| |||||||    
T  21862574 gtgtgtttatggagcacatgaatcgcatttttcatgcatttttggaccgtttcgtggttgtttttattgatgacattttaatttactccaagactgagga 21862673  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
    ||| |||||||||||||||| ||| || |||||||| || ||||||||  || | | ||  || || |||||||||||||| |||||||| || ||||||    
T  21862674 agaacatgctgagcatttgaagatggttttgcaagtgttcaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagt 21862773  T
Q  302 ttccttg 308  Q
    || ||||    
T  21862774 tttcttg 21862780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 430322 - 430515
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||| | | || |||||| | | | |||| || || ||||| || ||||| |||||||||||| | || || |||||||| ||||| |    
T  430322 tttatggagtacatgattcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaagaac 430421  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || || |||||||||||||| ||||| || ||||||||    
T  430422 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaattctggttaaaagaagtgag 430515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 31538186 - 31538339
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 31538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 37679250 - 37679097
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||| |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  ||||||  ||||||| |||||| |||| ||||| |||||||| |||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaa 37679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 48425074 - 48424921
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 48424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 52987942 - 52987789
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 52987789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 21743741 - 21743897
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||| | || ||  | |||||    
T  21743741 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatcacatcttaatttattc 21743840  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| |||||| ||| |||||| |||||||| ||||||||    
T  21743841 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaaga 21743897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 249
Target Start/End: Original strand, 50618547 - 50618746
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || ||||||||||||||||||   || |||||| | | | | || |    
T  50618547 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcccctggagtgtttatggagtacatgaatcacatttttcatgcattttttgatc 50618646  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| |||||||||||    
T  50618647 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagagaa 50618746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1114 - 1172
Target Start/End: Original strand, 9794223 - 9794281
Alignment:
Q  1114 ttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgat 1172  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||    
T  9794223 ttcaaacaacactttgtaacctttttcaagtaattgcccaacactcaacagattttgat 9794281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 16348856 - 16348998
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16348856 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16348955  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  16348956 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 16348998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 41351916 - 41352069
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |      
T  41351916 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 41352015  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  41352016 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttg 41352069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 17043275 - 17043422
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    ||||| || |||||||||||| | || || ||| || | ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  17043275 gtgtttatcgatgatattttgatttactccaagactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatg 17043374  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||| ||||||||||| |||||||| ||||| ||||| ||||    
T  17043375 ctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttg 17043422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 20834089 - 20834248
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||  ||||| || |||||||| |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||||||| || | |||||    
T  20834089 ctaatgcgcgtggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattc 20834188  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
     ||| |||| ||||| ||||| || ||||||| ||||||||||||| | |||||||||||    
T  20834189 aaagactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaa 20834248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 41308748 - 41308645
Alignment:
Q  185 tattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaatttt 284  Q
    ||||| ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || ||||||||||    
T  41308748 tattctaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaatttt 41308649  T
Q  285 ggtt 288  Q
    ||||    
T  41308648 ggtt 41308645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1139 - 1217
Target Start/End: Original strand, 20785296 - 20785374
Alignment:
Q  1139 tcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctg 1217  Q
    ||||||||||| || ||||| ||||| || |||||||| ||||| || || || ||||||||||||| |||||||||||    
T  20785296 tcaagtaattgacccacactcaacaagttttgatcaatctcaggtacatataaaacatcagaaattagctttgtacctg 20785374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 22360513 - 22360643
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||||||| | || || |||||||| ||||| | ||||||||||||||   | || ||||| || |||||||||||   | | | ||  || ||||    
T  22360513 gatgatattttgatttactccaagtctgaagaagaacctgctgagcatttgaaactggttttgcaggtgttgaaagagaagatgatttatgcgaaattgt 22360612  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||| |||||||||||||||||    
T  22360613 ctaagtgtgaattctggttgaaggaagtgag 22360643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1139 - 1217
Target Start/End: Complemental strand, 29470762 - 29470684
Alignment:
Q  1139 tcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctg 1217  Q
    ||||||||||| || ||||| ||||| || |||||||| ||||| || || || ||||||||||||| |||||||||||    
T  29470762 tcaagtaattgacccacactcaacaagttttgatcaatctcaggtacatataaaacatcagaaattagctttgtacctg 29470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1114 - 1172
Target Start/End: Original strand, 45997596 - 45997654
Alignment:
Q  1114 ttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgat 1172  Q
    ||||||||||||||| |||| | |||||||||||||||||||||| |||| ||| ||||    
T  45997596 ttcaaacaacactttgtaacatttttcaagtaattgcccaacactcaacagattttgat 45997654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 21026269 - 21026184
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  21026269 ttcatcgatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 21026184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 21953079 - 21952923
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  21953079 ctaacgcgcctggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 21952980  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     |||   || || |||||||| |||||| |||| ||||| |||||||| ||||||||    
T  21952979 caagaacgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaaga 21952923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1477 - 1580
Target Start/End: Complemental strand, 49211920 - 49211817
Alignment:
Q  1477 tttacaaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacag 1576  Q
    ||||||||| ||  ||||||| ||||||| ||| |||||| | ||||| ||||| || |||||||||||| |||| ||||| |||||  | ||||| |||    
T  49211920 tttacaaatcacatcttcatgacccatttcattgcacttgttgcactttgcatctggccttctccaacatttaaatggtgggtgacccatttttccgcag 49211821  T
Q  1577 tgtt 1580  Q
    ||||    
T  49211820 tgtt 49211817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 22503552 - 22503637
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| || ||||||||    
T  22503552 ttcatcgatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttaaaagagaa 22503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1481 - 1594
Target Start/End: Complemental strand, 26401777 - 26401664
Alignment:
Q  1481 caaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgtt 1580  Q
    ||||| || |||||||| || ||||| ||||||||| | || || |||| |||||  |||||||||||||| || ||||||||  | ||   ||||||||    
T  26401777 caaattacagcttcatgaccaatttggttacacttgctgcattttgcattaggtcgcctccaacatctaaaaggaggatgacccattttgttacagtgtt 26401678  T
Q  1581 gacatggaggataa 1594  Q
    | ||||||||||||    
T  26401677 ggcatggaggataa 26401664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 645; Significance: 0; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 645; E-Value: 0
Query Start/End: Original strand, 309 - 1045
Target Start/End: Complemental strand, 28391624 - 28390887
Alignment:
Q  309 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28391624 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 28391525  T
Q  409 attccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnnnnng 508  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |    
T  28391524 attccgctcaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatttgtttcttctttcactaactccattttgttg 28391425  T
Q  509 tggagtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgaga 608  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28391424 tgaagtgtatggaacagtcaattgatgatgaatgccaacgtcatcacataatcgatcaaatgcttcagaagtatactctttgccattgtctgatctgaga 28391325  T
Q  609 gcttgaattttacaaccactttcattctccgctcttgctttga-tttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacaca 707  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28391324 gcttgaattttacaaccactttcattctccactcttgctttgaatttccgaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacaca 28391225  T
Q  708 tacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaactt 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28391224 tacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtgggcctacaatgtcagtatgaattaattgcaactt 28391125  T
Q  808 cattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatg 907  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28391124 ctttgttgctctccaagttgtctttggaaatggcttcctgccttgctttccaaactgacaagccttgcaatttgaaatatggtcatcaagttctggaatg 28391025  T
Q  908 tcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaa 1007  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28391024 tcatttgccatctccttgaatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtttgtgacattttctttcatttgaa 28390925  T
Q  1008 aagcaatttgctcctcctccaatggatttagagcaaaa 1045  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  28390924 aagaaatttgctcctcctccaatggatttagagcaaaa 28390887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 15291186 - 15291493
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291186 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 15291285  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  15291286 ggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 15291385  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||||    
T  15291386 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgag 15291485  T
Q  301 tttccttg 308  Q
    ||||||||    
T  15291486 tttccttg 15291493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 5e-63
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 12340912 - 12341135
Alignment:
Q  20 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtaca 119  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| || |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  120 tgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcattt 219  Q
    ||||||| ||||| ||||||| ||||||| ||||||||||  | || || |||||||| || |||||| ||||||| ||||| ||||||||||||||| |    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatct 12341111  T
Q  220 gaggattgtgttgcaagtcttgaa 243  Q
    ||||||||||||||  ||||||||    
T  12341112 gaggattgtgttgcgtgtcttgaa 12341135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 50 - 308
Target Start/End: Complemental strand, 14696308 - 14696050
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | |||||||||||||| |||||||||||||||||    || |||||| | ||| ||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | || ||||| |||||||| |||||||||||| | || |||||||| || ||||| |||||||||||||||| |||||| ||||||||  ||||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      | |||| ||  |||||||| |||||||| || |||||||| || |||||||| ||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttg 14696050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 1543314 - 1543132
Alignment:
Q  318 ggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgattccgccc 417  Q
    ||||| || ||||||||||| |||||||| |||| || |||||||||  |||| |||||||| ||||| | | |||| |  || ||||||| ||| ||||    
T  1543314 ggtttgtatccataccaagcttcaaatggtgtctgattctttactgcagttgtgggaagcctgttttgaagaaaaactgatgtatttgccgcttcagccc 1543215  T
Q  418 aaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactcca 500  Q
    | || |  |||||||||||||||||||||| ||| |||| ||||||||||| |||  |||| |||||||||||||||||||||    
T  1543214 agaacttttttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactcca 1543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 14849225 - 14849441
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | |||| || || ||||| |||||||| || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||| || ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  |||||| ||  || ||||| ||||||||||| ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaa 14849424  T
Q  292 ggaagtgagtttccttg 308  Q
     || || ||||| ||||    
T  14849425 agaggtaagttttcttg 14849441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 50 - 288
Target Start/End: Complemental strand, 8708106 - 8707868
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||  ||||| ||||||||||||||||||||||| || ||| ||||| |||| |    
T  8708106 tatggacattacgaatattcagtgatgcctttcggtgttactaacgcgcggggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 8708007  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | |||||||| ||||| || ||||| || ||| | ||||| |||||||| ||||||||||| ||||||| ||   ||||||||||||| ||||| || ||    
T  8708006 ggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcattagaaagttgtgttgcaagtgttgaaggaaaa 8707907  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
      || | | ||  |||||||| || ||||||||||||||    
T  8707906 gaagatgtatgccaagttgtccaaatgtgaattttggtt 8707868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 5e-23
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 40475178 - 40474982
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || |||||| | | | |||| || |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |    
T  40475178 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaac 40475079  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||| ||||||||||| |||||||| |||||||||||    
T  40475078 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 40474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 15323372 - 15323174
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||||||||| |||||| |||  |||||||||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| |||||    
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 15323174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 14301853 - 14302049
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  14301853 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 14301952  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  14301953 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14302049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 23957885 - 23957689
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  23957885 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 23957786  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  23957785 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 23957689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 47 - 249
Target Start/End: Original strand, 8322850 - 8323052
Alignment:
Q  47 aggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctgg 146  Q
    ||||||||||||||| | ||||| || ||||| |||||  |  |||||||| |||  || |||||||| ||||  ||||  || |||||||| |||  ||    
T  8322850 aggtatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcgg 8322949  T
Q  147 accgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    | |  ||||||||||||||||| || ||||||||||||||||||||||  ||||| |||||||| |||||| |||| ||||| ||| |  ||||||| ||    
T  8322950 atcagtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaagga 8323049  T
Q  247 gaa 249  Q
    |||    
T  8323050 gaa 8323052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 51604909 - 51605127
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  51604909 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 51605008  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    |||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||| | ||  || ||||| || ||||| |||||| |     
T  51605009 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 51605108  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||||||||    
T  51605109 agtgaagtgagtttccttg 51605127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 14999321 - 14999252
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 14999252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 8051497 - 8051693
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  8051497 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 8051596  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  8051597 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 15072514 - 15072358
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||||||||||||| | || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     |||  |||  |||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 15072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 27713474 - 27713278
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  27713474 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 27713375  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| | |||||| |||||||||||    
T  27713374 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctagttgaaagaagtgagttt 27713278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 14682651 - 14682504
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14682651 gtgttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14682552  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  14682551 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttg 14682504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 3262911 - 3263064
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 3263064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 44659983 - 44660136
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| |||||||||||||||||| |||| || ||| ||| ||||||    ||||| |||||||| || || ||||||||  | |||||    
T  44659983 ctaacgcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattc 44660082  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| |||||    
T  44660083 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 44660136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 15001482 - 15001638
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| | ||| ||||||||||| |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     |||  ||| ||||||||||| || ||| ||||||||||||||||||| ||||||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaaga 15001638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 18547696 - 18547866
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    ||||| || ||||||||||| |||| ||| || ||| | ||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| | || |    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttg 220  Q
      ||||| ||||| ||||| ||||||||||||||||| || || || ||||| || ||||| || ||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgtactctaaatcggaggaggaacatgcagaacatttg 18547866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 9292841 - 9292772
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttggttgaaggaaatgactttccttg 9292772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 1647394 - 1647537
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||||| || || ||| ||| ||||||    || |||||||| ||||| |||||||||||| | |||||    
T  1647394 ctaatgcgcctggtgtgtttatggagtatatgaataggattttccatgcttttctggataaattcgtggtggtattcattgatgatattttgatttattc 1647493  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgc 233  Q
     ||| |||| || |||||||| || ||  ||| |||||||||||    
T  1647494 taagactgaagaggagcatgcagaacacctgaagattgtgttgc 1647537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 303
Target Start/End: Complemental strand, 12478684 - 12478542
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  12478684 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 12478585  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  12478584 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 12478542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 19776721 - 19776863
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  19776721 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 19776820  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  19776821 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19776863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 8388462 - 8388349
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||    
T  8388462 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatga 8388363  T
Q  295 agtgagtttccttg 308  Q
     |||||||||||||    
T  8388362 ggtgagtttccttg 8388349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 248
Target Start/End: Original strand, 15145759 - 15145900
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || ||| |||| ||||| |    
T  15145759 tttatggagtacatgaatcgtatctttcatgcatttttggatcgattcgtggttgtctttatcgatgatattttgatttactccaagactgaagaagaac 15145858  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagaga 248  Q
    ||||||||||| |||  ||||| |||||||| ||||||||||    
T  15145859 atgctgagcatctgaacattgtcttgcaagtgttgaaagaga 15145900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 29451654 - 29451807
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  29451654 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 29451753  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| || ||| |||| ||||| |||||||| |||||    
T  29451754 caagaatgaggaggagcatgcagatcatctgagaattgtattgcaagtgttgaa 29451807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 18613786 - 18613882
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | || ||| ||||||||||||||||| ||||||||    
T  18613786 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaattctggttgaa 18613882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 17093023 - 17093165
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  17093023 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 17093122  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||    
T  17093123 atgctgagcatctgaagattgtcttacaagtgttgaaagagaa 17093165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 18225408 - 18225510
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||    
T  18225408 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 18225507  T
Q  295 agt 297  Q
    |||    
T  18225508 agt 18225510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 16234920 - 16235008
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||    
T  16234920 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaa 16235008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1325 - 1368
Target Start/End: Complemental strand, 15538441 - 15538398
Alignment:
Q  1325 ttattatatgtcatgtggttggtacaaccactatcaatcagcca 1368  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  15538441 ttatcatatgtcatgtggtttgtacaaccactgtcaatcagcca 15538398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1477 - 1580
Target Start/End: Complemental strand, 25429356 - 25429253
Alignment:
Q  1477 tttacaaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacag 1576  Q
    ||||||||| ||  ||||||| ||||||| ||| |||||| | ||||| ||||| || |||||||||||| |||| ||||| |||||  | ||||| |||    
T  25429356 tttacaaatcacatcttcatgacccatttcattgcacttgctgcactttgcatctggccttctccaacatttaaatggtgggtgacccatttttccgcag 25429257  T
Q  1577 tgtt 1580  Q
    ||||    
T  25429256 tgtt 25429253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1481 - 1594
Target Start/End: Complemental strand, 1542144 - 1542031
Alignment:
Q  1481 caaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgtt 1580  Q
    ||||| || |||||||| || ||||| ||||||||| | || || |||| |||||  |||||||||||||| || ||||||||  | ||   ||||||||    
T  1542144 caaattacagcttcatgaccaatttggttacacttgctgcattttgcattaggtcgcctccaacatctaaaaggaggatgacccattttgttacagtgtt 1542045  T
Q  1581 gacatggaggataa 1594  Q
    | ||||||||||||    
T  1542044 ggcatggaggataa 1542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 14161661 - 14161568
Alignment:
Q  54 gacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctgga 147  Q
    |||| ||||| | ||| |||||||| || || || |||||||| || || || ||||||||||| ||||| ||||| |||||| ||||||||||    
T  14161661 gacattatgaattttcagtgatgcctttcggtgtttctaatgcacctggagtatttatggagtatatgaacagaatttttcatgcttatctgga 14161568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 16353474 - 16353523
Alignment:
Q  200 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  16353474 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 16353523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 29037437 - 29037474
Alignment:
Q  266 ttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  29037437 ttgtctaagtgtgaattctggttgaaagaagtgagttt 29037474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 395; Significance: 0; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 367 - 1593
Target Start/End: Original strand, 20081951 - 20083164
Alignment:
Q  367 ttgtaggaagcctattttgcaaataaacagcagtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctc 466  Q
    |||||||||||||||||| |||||||||| || | ||  |  ||||| |||| |||||| | || |||||||||||||||| |||||||||| |||||||    
T  20081951 ttgtaggaagcctatttttcaaataaacaacaattttcactaattccacccacaattgcatgggcaagttcttctcatgcatcatacatcggttcatctc 20082050  T
Q  467 caatataaatctgtttcttctttcactaactccannnnnnngtggagtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatca 566  Q
    |||||||||||| |||||||||| ||||  |  |        |||| |||||||||||   | ||||| ||||||| ||| ||||||||||||||||||     
T  20082051 caatataaatctatttcttcttttactatttatattttgttctggattgtatggaacatatagttgataatgaatgtcagtgtcatcacataatcgatcc 20082150  T
Q  567 aatgcttcagaagtatactctttggcattgtctgatctgagagcttgaattttacaaccactttcattctccgctcttgctttgat-ttccaaaatactt 665  Q
    |||||||||||||||| ||||||   ||||||||||  ||||| |||| |||||||||||||||| ||||      || ||||||  |||||||||||||    
T  20082151 aatgcttcagaagtattctcttttctattgtctgatacgagagtttgacttttacaaccactttctttct------tttctttgaagttccaaaatactt 20082244  T
Q  666 gtgctacctctgacttgtgcttcagaaagaaaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgt 765  Q
    |||||||   || ||||||| ||| |||||| ||| ||||||||||  |||||||||   ||||||||| ||||||| ||||||||| |||||||  |||    
T  20082245 gtgctacaaatggcttgtgcatcataaagaagatctaacacatacgaataaaatcataggtgaatatagaataataatgactaccatccaaagaaagtgt 20082344  T
Q  766 tctttgtgggcctgcaatgttagtatgaattaattgcaacttcattgttgctctccaagttgtctttggaaatggcttcctgctttgctttccaaactga 865  Q
    | ||||||||| |||||||| | ||||||||| |||||||||  ||||| ||||||| ||||||||| ||||||||||| | ||||| |||||||||| |    
T  20082345 tatttgtgggcttgcaatgtcaatatgaattatttgcaacttttttgtttctctccatgttgtctttcgaaatggcttctttctttgatttccaaactaa 20082444  T
Q  866 caagccttgcaatttgaaatatggttatcaagttctggaatgtcatttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccga 965  Q
    |||||||||||||||||||||| || || ||||| |||||||||||||| ||||| ||| ||||| || ||||| |  ||||| | |||||||||| |||    
T  20082445 caagccttgcaatttgaaatattgtcattaagtt-tggaatgtcatttggcatctgcttagattttaactgcagtaggccttggtaatgataatgctcga 20082543  T
Q  966 gcc-ttttgtgccataagtctgtgacattttctttcatttgaaaagcaatttgctcctcctccaatggatttagagcaaaactttttcctctcattttta 1064  Q
    |||  || |||||| |||||| | ||||||||||| |||||||||||  ||| ||| ||||| |||  ||||| |  |||||  ||||||||||||||||    
T  20082544 gccaattagtgccacaagtctatcacattttctttaatttgaaaagcttttttctcatcctctaatcaatttaaaataaaacactttcctctcattttta 20082643  T
Q  1065 ctttgaaaatgtct-ttgccatcactatctttaatcaagcagctttcattttcaaacaacactttataacctctttcaagtaattgcccaacacttaaca 1163  Q
    |||||||  | | | || | ||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||| || |||||||||||||||||||     
T  20082644 ctttgaatttttttcttccgatcactatctttaatcaagcagctttcgttttctaacaaaac-ttataacctctttgaattaattgcccaacacttaacc 20082742  T
Q  1164 aattctgatcaatttcagggacgtacaacacatcagaaattaactttgtacctgaataggttgagattgctattgttccttttcctttcacagcaatgta 1263  Q
     |||  ||||||||| ||| |||||||||||| || ||| | ||||||||| |||||||||||||||| | ||      ||||||||||||| ||||||     
T  20082743 tatttcgatcaattttaggaacgtacaacacaacaaaaacttactttgtacttgaataggttgagatttcgat------ttttcctttcacaacaatgtg 20082836  T
Q  1264 attgccattcccaacccgaacttttgttgagtttgcattgcttagttccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatc 1363  Q
     || ||||| | |||| ||||||||| | | |||||||||||||||||||| ||||||| ||| |||| |||||| ||||| ||||||||| | ||||||    
T  20082837 ttttccatttctaacctgaacttttgatta-tttgcattgcttagttccctaaataaatccttgttatgtgtcatttggttagtacaaccattgtcaatc 20082935  T
Q  1364 agccaattctcacttgattcgatgctagagaaacatgttgcaacgaataagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgtt 1463  Q
    | ||||||||  |||||||| | ||||||||||||| ||||||| |||||||||||||||||||| |||| || |||||| ||||| |||||| || |||    
T  20082936 aaccaattctatcttgattcaaagctagagaaacatcttgcaacaaataagtgatcctcctcttcttcttcattaacaacatttgcgtcatcactaagtt 20083035  T
Q  1464 gttgattcctatttttacaaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacc 1563  Q
    ||||||| | ||||||||||||||  ||||||| || |||||| |||||||| ||||||||||||| | ||| || ||||||||||||||||| || |||    
T  20083036 gttgatttc-atttttacaaataatagcttcattcctcatttggttacacttagtacacttagcattatgtcatccccaacatctaaagggtgaattacc 20083134  T
Q  1564 tttctttccacagtgttgacatggaggata 1593  Q
    |||||| || ||||||| ||| ||||||||    
T  20083135 tttcttccctcagtgttaacagggaggata 20083164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 23507842 - 23507535
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23507842 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 23507743  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23507742 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 23507643  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  23507642 aagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagtgatgtgcaaagttgtctaagtgtgagttttggttgaaggaagtgag 23507543  T
Q  301 tttccttg 308  Q
    ||||||||    
T  23507542 tttccttg 23507535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 264; E-Value: 1e-146
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 21935398 - 21935705
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21935398 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 21935497  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21935498 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 21935597  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  21935598 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 21935697  T
Q  301 tttccttg 308  Q
    ||||||||    
T  21935698 tttccttg 21935705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 24583368 - 24583061
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583368 gattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 24583269  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  24583268 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtttgagg 24583169  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||||    
T  24583168 aagagcatgctgagcatttgagaattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgag 24583069  T
Q  301 tttccttg 308  Q
    ||||||||    
T  24583068 tttccttg 24583061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 17795436 - 17795254
Alignment:
Q  318 ggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgattccgccc 417  Q
    ||||| || |||||||||||||||||||| |||| || |||||||||  |||| |||||||| ||||| | | |||| |  || ||||||| ||| ||||    
T  17795436 ggtttgtatccataccaagcctcaaatggtgtctgattctttactgcagttgtgggaagcctgttttgaagaaaaactgatgtatttgccgcttcagccc 17795337  T
Q  418 aaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactcca 500  Q
    | || |  |||||||||||||||||||||| ||| |||| ||||||||||| |||  |||| |||||||||||||||||||||    
T  17795336 agaacttttttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactcca 17795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 20466358 - 20466616
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| ||||| ||  ||||||| || ||||| |||||| ||||||||||| | || |||||| | ||| | || |    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | || ||||| ||| |||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaa 20466557  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||| ||  |||||||| |||||||| || |||||||| || |||||||| ||||    
T  20466558 gaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttg 20466616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 5e-23
Query Start/End: Original strand, 92 - 308
Target Start/End: Complemental strand, 23473312 - 23473096
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| | |||||||||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| |||| || |    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||||||| ||||| |||||||||| ||| |   |||| ||||||||  ||||||||||  |||||| ||  || ||||| |||||||| || | ||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaa 23473113  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  23473112 tgaggtgagttttcttg 23473096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 22331203 - 22331399
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  22331203 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 22331302  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  22331303 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 65 - 308
Target Start/End: Complemental strand, 21409246 - 21409006
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 164  Q
    |||||||||||||| || || ||   |||||||||||| || |||||||| || |||||| | || |||||| ||||||| || |||||||| || ||||    
T  21409246 tattctgtgatgcctttcggtgttattaatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgt 21409147  T
Q  165 tcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaa 264  Q
    | || ||||||||| ||   || || ||||||||||| || ||||| ||||||||||| ||||| ||||||||  |||   ||||  | |||| ||  ||    
T  21409146 ttatagatgatattctgaaatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctga---agaagaatttatatgccaa 21409050  T
Q  265 gttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||| || ||||| ||||| |||||||| ||||||||||| ||||    
T  21409049 gttatcgaagtgcgaattctggttgaacgaagtgagttttcttg 21409006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 25428503 - 25428310
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||   | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| | |||||| ||||||||    
T  25428403 atgctgagcatttgaatctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctagttgaaagaagtgag 25428310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 40710850 - 40710649
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  40710850 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 40710751  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| || |||||||||||    
T  40710750 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttcct 40710651  T
Q  307 tg 308  Q
    ||    
T  40710650 tg 40710649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 14998055 - 14998251
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| || || |    
T  14998055 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaac 14998154  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  14998155 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14998251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 19772030 - 19771834
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| |||||||| || ||||| ||| | || || ||| |||| ||||| |    
T  19772030 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaac 19771931  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| |||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  19771930 atgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19771834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 26737028 - 26737244
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| || ||||| ||||||||||||||||||  ||| |||||| | | | | || ||||| ||||| |||||||| |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||| || ||||| |||||||| ||||||| |||| | ||||||||  ||||||| ||  |||||| ||  || || || ||||||||||| ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaa 26737227  T
Q  292 ggaagtgagtttccttg 308  Q
     || || ||||| ||||    
T  26737228 agaggtaagttttcttg 26737244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 29474389 - 29474585
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || |||||| | | | |||| |  |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  29474389 tttatggagtatatgaatcgcatctttcatgcatttttggatcagtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 29474488  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || || ||||||||||| |||||||| |||||||||||    
T  29474489 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgataaattatcgaagtgtgaattctggttgaaagaagtgagttt 29474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 37289812 - 37290008
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  37289812 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 37289911  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  37289912 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 37290008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 21679077 - 21679295
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| ||||||  ||| || ||    |||||||| || ||||| ||||| |||||| | |||||    
T  21679077 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattc 21679176  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || |||  ||||||||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  21679177 gagaactgaggaagagcatgcagaacatccgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 21679276  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  21679277 agtgaagtgagttttcttg 21679295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 23505164 - 23505095
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| | ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23505164 ttgaaggagaatcggttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttg 23505095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 27612457 - 27612228
Alignment:
Q  74 atgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatg 173  Q
    ||||| ||||||||  | ||||| || || || ||||||||||| |||||| | || || ||| | | | |||| || || ||||| ||||| || || |    
T  27612457 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtggttgtgtttatcgacg 27612358  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaa 273  Q
    |||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||    
T  27612357 atattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaa 27612258  T
Q  274 gtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||| |||||||| |||||||||||    
T  27612257 gtgtgaattctggttgaaagaagtgagttt 27612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 22349932 - 22349788
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  |    
T  22349932 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 22349833  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||| ||||||||||| ||||    
T  22349832 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 22349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 20250509 - 20250656
Alignment:
Q  16 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggag 115  Q
    ||||||||| || || || ||||| ||||| ||||||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||  |||||||||     
T  20250509 ggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaa 20250608  T
Q  116 tacatgaatagaatatttcatccttatctggaccgttttgtggtggtg 163  Q
    || |||||||| || || ||||||||| |||| |  ||||||||||||    
T  20250609 tatatgaataggattttccatccttatttggatcaatttgtggtggtg 20250656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 22136693 - 22136542
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  22136693 tttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22136594  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  22136593 aactttttgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 16358506 - 16358376
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  16358506 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16358407  T
Q  273 agtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||| |||||||| |||||||||||    
T  16358406 agtgtgaattctggttgaaagaagtgagttt 16358376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 34568498 - 34568368
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  34568498 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 34568399  T
Q  273 agtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||| |||||||| |||||||||||    
T  34568398 agtgtgaattctggttgaaagaagtgagttt 34568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 21337595 - 21337752
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | ||||  | || ||||| || ||||| || ||||||||| | || || |    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaatcgtatttttcatgcgtttttggatagcttagtggttgtattcatcgacgatattttgatttactcca 21337694  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||| ||| ||||| ||||||||||| |||| |||||| ||||||||  ||||||||||    
T  21337695 agtttgaagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaa 21337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 24796696 - 24796849
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  24796696 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatttattc 24796795  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  24796796 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 24796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 27666854 - 27667007
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| |||||||| || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |      
T  27666854 gtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaac 27666953  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || ||||||||||||||||| |||||||| ||||||||||||||||    
T  27666954 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttg 27667007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 17267633 - 17267789
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| | | ||||||    ||||||||||| || || ||||||||| || | |||||    
T  17267633 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattc 17267732  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| || ||  |||| |||||||||||||| ||||||||    
T  17267733 aaagactgaagaagagcatgcagaacacctgagaattgtgttgcaagtgttgaaaga 17267789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 27520476 - 27520280
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||  | || || ||| |||| ||||| |    
T  27520476 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttaatttactccaagactgaagaagaac 27520377  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  27520376 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27520280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 41772912 - 41772716
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||| ||| | || || ||| |||| ||||| |    
T  41772912 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatatcttgatttactccaagactgaagaagaac 41772813  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| |||||| ||| |||||| |||||||| |||||||||||  | || | ||  || |||||||| |||||||| |||||||| |||||||||||    
T  41772812 atgccgagcatctgaagattgttttgcaagtgttgaaagagaagaatttttatgctaaattgtctaaatgtgaattctggttgaaagaagtgagttt 41772716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 27683761 - 27683912
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || ||  |||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||| ||||||      
T  27683761 tttgtggttgtgtttatcgacaatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgagagagaaga 27683860  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    || | | ||  || ||||||||||||||||| ||||| || |||||||||||    
T  27683861 agctttatgctaaattgtctaagtgtgaattctggttcaaagaagtgagttt 27683912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 18781096 - 18780983
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| || ||||||||    
T  18781096 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaagga 18780997  T
Q  295 agtgagtttccttg 308  Q
    ||| ||||| ||||    
T  18780996 agtaagttttcttg 18780983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 20344340 - 20344192
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | ||||| |||  ||| |    
T  20344340 ggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattccaagaatgaag 20344241  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | |||||||| |||||| |||| ||||| |||||||| |||||||||||    
T  20344240 aggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 20344192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 22234219 - 22234375
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||| ||||||| ||||| | ||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  22234219 ctaatgcgcctggtgtgtttgtggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 22234318  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| ||||||||    
T  22234319 taagactgaagaagagcatgcagatcatctgaagattgtattgcaagtgttgaaaga 22234375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 303
Target Start/End: Complemental strand, 22504737 - 22504535
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | ||||| |||   || |    
T  22504737 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattctaagaacgaag 22504638  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | |||||||| |||||| |||| ||||| |||||||| |||||||||||   ||| | || ||||||||| || ||||| || ||||| |  ||||||||    
T  22504637 aggagcatgcagagcatctgagaattgtattgcaagttttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgag 22504538  T
Q  301 ttt 303  Q
    |||    
T  22504537 ttt 22504535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 14885290 - 14885443
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| || || |||||||| ||  | |||||    
T  14885290 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatatcttaatttattc 14885389  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| || || || |||||| |||| || ||||||||||| |||||    
T  14885390 caagaatgaggaggaacacgcagagcatctgagaatagtgttgcaagtgttgaa 14885443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1481 - 1594
Target Start/End: Complemental strand, 17794266 - 17794153
Alignment:
Q  1481 caaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgtt 1580  Q
    ||||| || |||||||| || ||||| ||||||||| | || || |||| |||||  |||||||||||||| || ||||||||  | ||   ||||||||    
T  17794266 caaattacagcttcatgaccaatttggttacacttgctgcattttgcattaggtcgcctccaacatctaaaaggaggatgacccattttgttacagtgtt 17794167  T
Q  1581 gacatggaggataa 1594  Q
    | ||||||||||||    
T  17794166 ggcatggaggataa 17794153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 276; Significance: 1e-154; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 7428 - 7121
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7428 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgcca 7329  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  7328 ggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 7229  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  7228 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgag 7129  T
Q  301 tttccttg 308  Q
    ||||||||    
T  7128 tttccttg 7121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 486 - 179
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  486 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgcca 387  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  386 ggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 287  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||    
T  286 aagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttttctaagtgtgagttttggttgaaggaagtgag 187  T
Q  301 tttccttg 308  Q
    ||||||||    
T  186 tttccttg 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 272; Significance: 1e-151; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 25669 - 25362
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25669 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 25570  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  25569 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 25470  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  25469 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 25370  T
Q  301 tttccttg 308  Q
    ||||||||    
T  25369 tttccttg 25362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 272; Significance: 1e-151; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 34360 - 34053
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34360 gattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 34261  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34260 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 34161  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||    
T  34160 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttggaggaagtaag 34061  T
Q  301 tttccttg 308  Q
    ||||||||    
T  34060 tttccttg 34053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 272; Significance: 1e-151; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 15183 - 14876
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15183 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 15084  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  15083 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 14984  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  14983 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 14884  T
Q  301 tttccttg 308  Q
    ||||||||    
T  14883 tttccttg 14876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 11205 - 11512
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  11205 gattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaatgcgcca 11304  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11305 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 11404  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||    
T  11405 aagagcataatgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttatataagtgtgagttttggttgaaggaagtgag 11504  T
Q  301 tttccttg 308  Q
    ||||||||    
T  11505 tttccttg 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 272; Significance: 1e-151; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 7826133 - 7825826
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7826133 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 7826034  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  7826033 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 7825934  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  7825933 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 7825834  T
Q  301 tttccttg 308  Q
    ||||||||    
T  7825833 tttccttg 7825826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 27105811 - 27106118
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27105811 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 27105910  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27105911 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 27106010  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  27106011 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 27106110  T
Q  301 tttccttg 308  Q
    ||||||||    
T  27106111 tttccttg 27106118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 27172514 - 27172207
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27172514 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 27172415  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27172414 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 27172315  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  27172314 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 27172215  T
Q  301 tttccttg 308  Q
    ||||||||    
T  27172214 tttccttg 27172207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 4442161 - 4441854
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||    
T  4442161 gattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaatgcgcca 4442062  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || ||||||| |||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  4442061 ggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgggg 4441962  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | |||||||  |||||||||||||| ||||||| ||||||||| || || | ||||||||  |||||||| |||||||| |||||||||  |||||||||    
T  4441961 aggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaaaatcggttatgtgctaagttgtcgaagtgtgagttttggttgcgggaagtgag 4441862  T
Q  301 tttccttg 308  Q
    ||||||||    
T  4441861 tttccttg 4441854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 184; E-Value: 7e-99
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 13458268 - 13457961
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| |||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  13458268 gattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgcca 13458169  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||| ||| ||||||| || ||| ||||||||||||||||| || |||||||||||||||||||||| ||| ||||    
T  13458168 ggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgaggtcagagg 13458069  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||| |||||||||||||||||||||||||||  |||||||||||||| || |||||||  ||||||||||||||||| |||||||||  |||||||||    
T  13458068 aggagtatgctgagcatttgaggattgtgttgcgtgtcttgaaagagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgag 13457969  T
Q  301 tttccttg 308  Q
    ||||||||    
T  13457968 tttccttg 13457961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 184; E-Value: 7e-99
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 17925883 - 17925576
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17925883 gattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 17925784  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||||||||||| || ||| |||||||||| ||||| ||||||  ||    
T  17925783 ggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaagtctaggg 17925684  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||| || |||||| || ||||||||||  |||||||| ||||| ||||||||||  |||||||||||||||||||||||||||   ||||||||    
T  17925683 aggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgcgtgaagtgag 17925584  T
Q  301 tttccttg 308  Q
    ||||||||    
T  17925583 tttccttg 17925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 3e-55
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 13379112 - 13378969
Alignment:
Q  5 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  13379112 agagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaatgcgccaggtg 13379015  T
Q  105 tctttatggagtacatgaatagaatatttcatccttatctggaccg 150  Q
    |||| ||| | || ||||||||||||||||||||||||||||||||    
T  13379014 tcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 9e-46
Query Start/End: Original strand, 42 - 308
Target Start/End: Original strand, 17143354 - 17143620
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||| ||||| || ||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 241  Q
    | |||| |  |||||||||||||| || || ||||| ||||||||||||||||| ||||| || ||||| |||||| |||||||||||||||     |||    
T  17143454 tttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgcgtacgttg 17143553  T
Q  242 aaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    || |||||  |||| | ||| |||||||| |||||||| |||||||||   |||| |||||||||||    
T  17143554 aaggagaagaagttgtttgataagttgtcgaagtgtgagttttggttgcgtgaagggagtttccttg 17143620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 4e-45
Query Start/End: Original strand, 11 - 308
Target Start/End: Original strand, 15716950 - 15717247
Alignment:
Q  11 aaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttta 110  Q
    |||||||| |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| |||||||||||  || |||||| |||  ||||||| |    
T  15716950 aaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttca 15717049  T
Q  111 tggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgc 210  Q
    |||| || |||||||||||||| ||||||| ||||||||  ||| |||| ||||| || || ||||| ||||| ||||| | ||| ||||| ||||||||    
T  15717050 tggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagcatgc 15717149  T
Q  211 tgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||| ||||| ||||  ||||||||   |||||| |||||  |||| | ||  || ||||| |||||||| ||||| ||| ||||||||||||| ||||    
T  15717150 tgaacattttaggaccgtgttgcagaccttgaaggagaagaagttgtttgctaatttgtcgaagtgtgagttttgattgcaggaagtgagttttcttg 15717247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 48813338 - 48813595
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||||||| |||| |||||||||||||||||| | || |||||| ||||| | || |    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatc 48813437  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | || ||||| |||||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| |||||||||||||||  |||| |||||    
T  48813438 gcttcgtggttgtgttcattgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaa 48813537  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||| ||  || ||||| ||||||||||| |||||||| || |||||||| ||||    
T  48813538 gaagttatatgccaa-ttgtcaaagtgtgaattctggttgaatgaggtgagttttcttg 48813595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 153 - 308
Target Start/End: Original strand, 11770430 - 11770585
Alignment:
Q  153 ttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacca 252  Q
    ||||||| |||||||| |||||||||||| | || || |||||||||| ||| |||||||||||||||| |||||| |||||||| |||||||||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  253 gttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||  || ||||||||||||||||| |||||||| || || ||||| ||||    
T  11770530 gttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttg 11770585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 15626669 - 15626451
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||| |||||||| |||||||||||||||||  | || |||||| ||||| | || || || ||||| | |||||| |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |||||||| ||||| ||||  ||| |||||| |||||| ||||||||  ||||||||||  |||||| ||  |||||||| ||||||||||| ||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttg 15626470  T
Q  290 aaggaagtgagtttccttg 308  Q
    || || |||||||||||||    
T  15626469 aatgaggtgagtttccttg 15626451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 11386533 - 11386746
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||||||||| ||||||||||| | ||| ||||| |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| |||||| |||||||||| || || ||  ||||||||||  |||| | ||  |||||||| || |||||||| |||||     
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggtta 11386732  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  11386733 agtgaagtgagttt 11386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 19149356 - 19149158
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||| |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  |||| ||||  |||||||| || |||||||| |||||    
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtt 19149158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 19614820 - 19614602
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 19614621  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  19614620 agtgaagtgagttttcttg 19614602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 20748755 - 20748557
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  |||| ||||  |||||||| || |||||||| |||||    
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtt 20748557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 12204904 - 12205102
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||||||    | |||||| ||||| || |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||| |||  |||||||||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| |||||    
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 12205102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 11235356 - 11235552
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  11235356 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 11235455  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  11235456 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 11235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 15159200 - 15159396
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  15159200 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaac 15159299  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  15159300 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15159396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 11551299 - 11551446
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | ||||| ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  11551299 gtgttcatcgatgatattttgatttattccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 11551398  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  11551399 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttg 11551446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 14262349 - 14262546
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 14262448  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
      || |||| ||||||||||| |||||| ||| |||| |||||||||| |||||||| ||  |||| | ||  |||||||| || ||||||||||||||    
T  14262449 -tagactgaagaagagcatgcagagcatctgaagattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattttggtt 14262546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 8709732 - 8709536
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || ||| |||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  8709732 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttatggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 8709633  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  8709632 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8709536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 14139824 - 14139668
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || |||||||||||| | |||||    
T  14139824 ctaacgcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattc 14139725  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  14139724 taagactgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaaga 14139668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 14334523 - 14334327
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  14334523 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 14334424  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  14334423 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14334327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 23503974 - 23504130
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  23503974 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 23504073  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  23504074 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 23504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 14956627 - 14956480
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || ||| |||| |||||  ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14956627 gtgttcatcgatgatattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14956528  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| ||||||||||| ||||    
T  14956527 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttg 14956480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 26092902 - 26093055
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 26093055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 44789494 - 44789695
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |    
T  44789494 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttatgtttatcgacgatattttgatctactccaagactgaagaagaac 44789593  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| || |||||||||||    
T  44789594 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttcct 44789693  T
Q  307 tg 308  Q
    ||    
T  44789694 tg 44789695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 10872817 - 10872621
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  10872817 tttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggtcgtgtttatcgacgatattttgatctactccaagactgaagaagaac 10872718  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  |  | | |   || ||||||||||||||||| |||||||| |||||||||||    
T  10872717 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatcctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10872621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 12689572 - 12689428
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  |    
T  12689572 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 12689473  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||| ||||||||||| ||||    
T  12689472 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 12689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 18052057 - 18052213
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  18052057 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 18052156  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  18052157 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 18052213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 308
Target Start/End: Original strand, 15559 - 15694
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || |||||||    
T  15559 gatattttgatttactccaagactgaagaagaacatgctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtcta 15658  T
Q  273 agtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||| |||||||||||||| ||||| ||||    
T  15659 agtgtgaattctggttgaaggaagtaagttttcttg 15694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 39232 - 39402
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || ||||||||||| ||||| ||||| || ||||| ||| | || |    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatccatatttagatc 39331  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttg 220  Q
      || || || || ||||| ||||||||||||||||| || || || ||||| || ||||| || ||||||    
T  39332 agttcgttgtagtattcattgatgatattttggtgtactctaaatcagaggaggaacatgcagaacatttg 39402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 14041822 - 14041680
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | |||| ||||| || ||  | ||||| |||||||||||| | || || ||| |||||||||| |    
T  14041822 tttatggagtacatgaatcacatttttcatgcatttttggatcgtttcgtagttattttcattgatgatattttgatttactccaagactgaggaagaac 14041723  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||| ||||||||||| |||||| |||||||| |||||||||||    
T  14041722 atgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14041680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 14351852 - 14351710
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | |||| ||||| || ||  | ||||| |||||||||||| | || || ||| |||||||||| |    
T  14351852 tttatggagtacatgaatcacatttttcatgcatttttggatcgtttcgtagttattttcattgatgatattttgatttactccaagactgaggaagaac 14351753  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||| ||||||||||| |||||| |||||||| |||||||||||    
T  14351752 atgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 11301317 - 11301470
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  11301317 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 11301416  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  11301417 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 11301470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 15147012 - 15147229
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatcc-ttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcg 190  Q
    ||||| || ||||| |||||||||||||||||| | || || ||| | || | |||| || || |||||  | ||||| |||||||||||  | || ||     
T  15147012 aatgcacctggtgtgtttatggagtacatgaatcgcattttccatgcattttttggatcggttcgtggtttttttcattgatgatatttttatctactcc 15147111  T
Q  191 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttga 290  Q
    ||| |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |  | | || ||| |||||||||||||| || |||||||    
T  15147112 aagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgagttctggttga 15147211  T
Q  291 aggaagtgagtttccttg 308  Q
    | || || ||||| ||||    
T  15147212 aagaggtaagttttcttg 15147229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 26116694 - 26116847
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| |||||||||||||||||| |||| || ||| ||| ||||||    ||| | |||||||| || || ||||||||  | |||||    
T  26116694 ctaacgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattc 26116793  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| |||||    
T  26116794 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 26116847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 49154446 - 49154293
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||| |||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 49154293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 302
Target Start/End: Complemental strand, 13675597 - 13675385
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| |||| |||||    |||||||| || || || ||||| ||| || | |||||    
T  13675597 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattc 13675498  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| |||||| ||| |||||| |||||||| ||||| |||||  |||| | ||  |||||||| |||||||| || |||||     
T  13675497 aaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtta 13675398  T
Q  290 aaggaagtgagtt 302  Q
    |  ||||||||||    
T  13675397 agtgaagtgagtt 13675385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 13966772 - 13966931
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  13966772 ctaacgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 13966871  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
     |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||||||    
T  13966872 caagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 13966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 13688168 - 13688026
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  13688168 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaac 13688069  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||    
T  13688068 atgctgagcatctgaagattgttttgcaagtgttgaaagagaa 13688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1114 - 1172
Target Start/End: Original strand, 35929384 - 35929442
Alignment:
Q  1114 ttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgat 1172  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||    
T  35929384 ttcaaacaacactttgtaacctttttcaagtaattgcccaacactcaacagattttgat 35929442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 13023502 - 13023289
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||| | || |||||  |||| || ||| ||| ||||||    |||||||||||||| || ||||||| |||| | |||||    
T  13023502 ctaatgcgcctggtgtttttatgtattatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttattgatgataatttgatttattc 13023403  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| || |||||||| || ||| |||| ||||| |||||||| |||||||| ||  |||| | ||  |||||||| || ||||| || |||||     
T  13023402 taagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttgtggtta 13023303  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  13023302 agtgaagtgagttt 13023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 14938341 - 14938272
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||| || ||||| ||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  14938341 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttg 14938272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 15365934 - 15365865
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||| || ||||| ||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  15365934 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttg 15365865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 16948576 - 16948789
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| || || ||||||||||| |||||  |||| || ||| ||| ||||||    |||||||| ||||| || ||||||||| || | |||||    
T  16948576 ctaatgcgcctggcgtgtttatggagtatatgaaccgaattttccatgcttttctggataaatttgtggttgtgtttattgatgatattctgatttattc 16948675  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||    || || ||||| || |||||| ||| |||||||||||||||||||||||| ||  |||| | ||  ||| |||| |||||||| ||||||||     
T  16948676 taaaatcgaagaggagcacgcagagcatctgaagattgtgttgcaagtcttgaaagaaaagaagttgtatgctaagctgtcaaagtgtgagttttggtta 16948775  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  16948776 agtgaagtgagttt 16948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 15122170 - 15122297
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||| ||||||||||| || |||| || |||| ||||    |||||||| ||||||||  | ||||| ||||||||||| ||||  ||||| ||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  207 atgctgagcatttgaggattgtgttgca 234  Q
     ||| |||||| |||| |||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgca 15122297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 15100707 - 15100863
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  15100707 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 15100806  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| || ||| ||| ||| || |||||||| ||||||||    
T  15100807 taagactgaagaagagcatgcagaacatctgaagatcgtcttgcaagtgttgaaaga 15100863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 16070416 - 16070555
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| ||||| ||||| || |||   ||||||||    |||||||| ||||| || ||||||||| |  | ||||| ||| |||| |||||||    
T  16070416 tttatggagtatatgaacagaattttccatgtctatctggataaatttgtggttgtgtttattgatgatattctcatttattctaagactgaagaagagc 16070515  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| ||| || ||| |||||| |||||||| ||||||||    
T  16070516 atgcagagtatctgaagattgtattgcaagtgttgaaaga 16070555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1477 - 1580
Target Start/End: Complemental strand, 35940014 - 35939911
Alignment:
Q  1477 tttacaaataactgcttcatgccccatttgattacacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacag 1576  Q
    ||||||||| ||  ||||||| ||||||| ||| |||||| | ||||| ||||| || |||||||||||| |||| ||||| |||||  | ||||| |||    
T  35940014 tttacaaatcacatcttcatgacccatttcattgcacttgctgcactttgcatctggccttctccaacatttaaatggtgggtgacccatttttccgcag 35939915  T
Q  1577 tgtt 1580  Q
    ||||    
T  35939914 tgtt 35939911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 8200596 - 8200559
Alignment:
Q  266 ttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  8200596 ttgtctaagtgtgaattctggttgaaagaagtgagttt 8200559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 14284542 - 14284639
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| || ||||| ||||| |||||| | ||||| ||| |||| || |||||| | || ||| |||||||| | |||||||| |||||||||||    
T  14284542 tttgtggttgtattcattgatgacattttgatttattctaagactgaagaggagcatacagaacatctgaggattatattgcaagtattgaaagagaa 14284639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 15342463 - 15342358
Alignment:
Q  203 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtt 302  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||| | ||  |||||||| || |||||||| ||||| |  ||||||||||    
T  15342463 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 15342364  T
Q  303 tccttg 308  Q
    | ||||    
T  15342363 ttcttg 15342358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 18588314 - 18588435
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  18588314 tttatggagtatatgaattgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 18588413  T
Q  207 atgctgagcatttgaggattgt 228  Q
    ||||||||||||||| ||||||    
T  18588414 atgctgagcatttgaagattgt 18588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 35968006 - 35968107
Alignment:
Q  399 gtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactc 498  Q
    |||||||||| ||| |||||||| || || || |  | ||||||||||| ||||||||  | |||||||| || | |||| ||||| |||||||||||||    
T  35968006 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 35968105  T
Q  499 ca 500  Q
    ||    
T  35968106 ca 35968107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 35989418 - 35989519
Alignment:
Q  399 gtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactc 498  Q
    |||||||||| ||| |||||||| || || || |  | ||||||||||| ||||||||  | |||||||| || | |||| ||||| |||||||||||||    
T  35989418 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 35989517  T
Q  499 ca 500  Q
    ||    
T  35989518 ca 35989519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 43584773 - 43584672
Alignment:
Q  399 gtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactc 498  Q
    |||||||||| ||| |||||||| || || || |  | ||||||||||| ||||||||  | |||||||| || | |||| ||||| |||||||||||||    
T  43584773 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 43584674  T
Q  499 ca 500  Q
    ||    
T  43584673 ca 43584672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 272; Significance: 1e-151; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 16380546 - 16380853
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16380546 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 16380645  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16380646 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16380745  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  16380746 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 16380845  T
Q  301 tttccttg 308  Q
    ||||||||    
T  16380846 tttccttg 16380853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 16648142 - 16648449
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648142 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 16648241  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16648242 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16648341  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||||    
T  16648342 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgag 16648441  T
Q  301 tttccttg 308  Q
    ||||||||    
T  16648442 tttccttg 16648449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 23998356 - 23998049
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998356 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 23998257  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||    
T  23998256 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaagtccgagg 23998157  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  23998156 aagagcatgctgaacatttgaggattgtgttgtaagtcttgaaagagaaccagttatgtgccaagttgtctaagtgtgagttttggttggaggaagtgag 23998057  T
Q  301 tttccttg 308  Q
    ||||||||    
T  23998056 tttccttg 23998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 1646987 - 1647294
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646987 gattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 1647086  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  1647087 ggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaagtttgagg 1647186  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  1647187 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagataaccggttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 1647286  T
Q  301 tttccttg 308  Q
    ||||||||    
T  1647287 tttccttg 1647294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 14130577 - 14130270
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||| |||| |||| || |    
T  14130577 gattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaatgtgcta 14130478  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||    
T  14130477 ggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaagtttgagg 14130378  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||   ||||||||    
T  14130377 aggagcatgctgagcatttgaggattgtgttacgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgtgagaagtgag 14130278  T
Q  301 tttccttg 308  Q
    ||||||||    
T  14130277 tttccttg 14130270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 16100123 - 16099810
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||    
T  16100123 gattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaatgtgcca 16100024  T
Q  101 ggtgtctttat------ggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagt 194  Q
    |||||||||||      |||||| |||||||||||||||||||| ||| |||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  16100023 ggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtattcgaagt 16099924  T
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    || |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||    
T  16099923 ctaaggaggagcacgctgagcatttaaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagga 16099824  T
Q  295 agtgagtttccttg 308  Q
    ||||| ||||||||    
T  16099823 agtgaatttccttg 16099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 119 - 308
Target Start/End: Original strand, 23026016 - 23026205
Alignment:
Q  119 atgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatt 218  Q
    |||||||||||||||||||||| | || ||||||||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||  |||||    
T  23026016 atgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgaggaggagcatgcttcgcatt 23026115  T
Q  219 tgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  23026116 tgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttg 23026205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 177 - 308
Target Start/End: Original strand, 18836257 - 18836388
Alignment:
Q  177 ttttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtg 276  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  277 tgaattttggttgaaggaagtgagtttccttg 308  Q
    ||| ||||||||||||| |||||| |||||||    
T  18836357 tgagttttggttgaagggagtgagcttccttg 18836388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 18578101 - 18578010
Alignment:
Q  217 tttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18578101 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttggttgaaggaagtgagtttccttg 18578010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23025919 - 23026007
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 89  Q
    ||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23025919 gattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 19985805 - 19985896
Alignment:
Q  217 tttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||| ||||    
T  19985805 tttgaggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagcgagttttcttg 19985896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 50 - 237
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||| ||||| |||||||||||||||||| | || |||||| | ||| |||| |    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 237  Q
    | || ||||| |||||||| |||||||||||| | || || |||| ||| ||||| |||||||||||||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 7036018 - 7035836
Alignment:
Q  318 ggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccgattccgccc 417  Q
    ||||| || ||||||||||| |||||||| |||| || |||||||||  |||| |||||||| ||||| | | |||| |  || ||||||| ||| ||||    
T  7036018 ggtttgtatccataccaagcttcaaatggtgtctgattctttactgcagttgtgggaagcctgttttgaagaaaaactgatgtatttgccgcttcagccc 7035919  T
Q  418 aaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactcca 500  Q
    | || |  |||||||||||||||||||||| ||| |||| ||||||||||| |||  |||| |||||||||||||||||||||    
T  7035918 agaacttttttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactcca 7035836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 23080471 - 23080329
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | ||| || ||||| ||||| |||||||| |||||||||||| | || || |||||||||||||| |    
T  23080471 tttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaac 23080372  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||||||| |||||| ||||||||  ||||||||||    
T  23080371 atgctgagcatttgaagattgttttgcaagtgctgaaagagaa 23080329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 19881317 - 19881158
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||||| || |||||| |||| |||||    |||||||| |||||||| ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||    
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 19881158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 162 - 308
Target Start/End: Original strand, 18965629 - 18965775
Alignment:
Q  162 tgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtga 261  Q
    ||||||| |||||||||||| | ||| | |||||||| ||||| ||| |||||||||||| |||||| || |||||  ||||||||||  |||||| ||     
T  18965629 tgttcattgatgatattttgatatatgctaagtctgaagaagaacattctgagcatttgaagattgtttttcaagtgatgaaagagaagaagttatatgc 18965728  T
Q  262 aaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
     |||||||| ||||||||||| |||||||| || |||||||||||||    
T  18965729 taagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttg 18965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 50 - 300
Target Start/End: Original strand, 18406166 - 18406416
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||||||||||||| | || |||||| | | | |||| |    
T  18406166 tatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 18406265  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||||| || ||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||   | || |||||||| |||||||||||    
T  18406266 gttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaaactggttttgcaagtgttgaaagagaa 18406365  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
      |  ||| ||  || |||| |||||||||||| |||||||| ||||||||    
T  18406366 gaaactatatgctaaattgtttaagtgtgaattctggttgaaagaagtgag 18406416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 2873082 - 2873283
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |    
T  2873082 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttatgtttatcgacgatattttgatttactccaagactgaagaagaac 2873181  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| |||||||| ||||| |||||  || | | ||  || |||||||||||||||||||||||||| ||||||||||||||    
T  2873182 atgctgagcatctgaagattgttttgcaagtgttgaaggagaagaagctttatgctaaattgtctaagtgtgaattttggttgaaagaagtgagtttcct 2873281  T
Q  307 tg 308  Q
    ||    
T  2873282 tg 2873283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 18196049 - 18196213
Alignment:
Q  144 tggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
    |||| ||||||||||| ||||||||  ||||||||||| | || || ||||| || |||||||||||| ||||||||| |||||| ||||||||  ||||    
T  18196049 tggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagtgctgaa 18196148  T
Q  244 agagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||  || ||| ||  || ||||| |||| ||||||||||||||| || |||| ||| ||||    
T  18196149 agagaagaagctatatgctaaattgtcaaagtatgaattttggttgaaagatgtgaattttcttg 18196213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 24294061 - 24294257
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  24294061 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 24294160  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  24294161 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 110 - 308
Target Start/End: Original strand, 34643868 - 34644066
Alignment:
Q  110 atggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||||||| ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | |||||||   | |||||||||||||    
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  210 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | || ||| | || |||||||||||||| |||||||||||  |||| | ||  || ||||| |||||||| || ||||| |  ||||| ||||||||||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttg 34644066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 20634219 - 20634412
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || |||||| | ||||| |    
T  20634219 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagtctaaagaagaac 20634318  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||||||||    
T  20634319 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 20634412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 22760734 - 22760927
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || ||  ||||||||||| | || || |||||||| |||||||    
T  22760734 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattaatgatattttgatttactccaagtctgaagaagagc 22760833  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || ||| |||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||||||||    
T  22760834 atgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 22760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16234898 - 16234831
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgaaggaagggagtttcct 16234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 163 - 308
Target Start/End: Original strand, 22828690 - 22828835
Alignment:
Q  163 gttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaa 262  Q
    |||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||      
T  22828690 gttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcc 22828789  T
Q  263 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    || |||||||||||||| || |||||||| ||||||||||| ||||    
T  22828790 aaattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 22828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 14378178 - 14378376
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14378178 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14378277  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| || |||||||| |||||| ||| |||||| ||||||||||||||||||||  |||| | ||  |||||||| || ||||| ||||||||    
T  14378278 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtt 14378376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 14379728 - 14379926
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14379728 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14379827  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| || |||||||| |||||| ||| |||||| ||||||||||||||||||||  |||| | ||  |||||||| || ||||| ||||||||    
T  14379828 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtt 14379926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 19487504 - 19487687
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  |||||||||| ||||| |||||||||||||||||||          | ||||| |||| |    
T  19487504 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggagtacatgaata----------tgcttatttggatc 19487593  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
    | |||||||| || || || ||||| || ||| | ||||| |||||||| ||||||||||| |||||||| | ||||||||||||||| |||||    
T  19487594 ggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaa 19487687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 24366431 - 24366233
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||| ||||||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  24366431 ctaatgtgccaggtgtatttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 24366332  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  |||||| |||||||| |||||  |||| ||||| |||||||| ||||| || ||   ||| | || ||||||||| |||||||| || |||||    
T  24366331 caagaatgaggaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaagtgtgagttctggtt 24366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 308
Target Start/End: Complemental strand, 25114499 - 25114353
Alignment:
Q  162 tgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtga 261  Q
    ||||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||     
T  25114499 tgttcatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgt 25114400  T
Q  262 aaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
     || || |||||||||||||| |||||||| || |||||||| ||||    
T  25114399 caaattatctaagtgtgaattctggttgaaagaggtgagttttcttg 25114353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 25769863 - 25769709
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| |||||| |||    |||||||| ||||| || ||||||||  |  | |||||    
T  25769863 ctaatgcgcctggtgtatttatggagtatatgaaccgaattttccatgcttatccggataaatttgtggttgtgtttattgatgatatcctaatttattc 25769764  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaa 244  Q
     |||| ||| ||||||||||| |||||| ||| ||||||||||||||| ||||||    
T  25769763 taagtatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaa 25769709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 14643664 - 14643817
Alignment:
Q  5 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 104  Q
    ||||| ||| |||| ||||| ||||| || || |||||||| || ||||||||||  || |||||||||||||||||||| ||  || ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  105 tctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtgg 161  Q
    |||| ||||| || ||||||||||| || ||||||||| |||| |  ||||||||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 16925965 - 16926118
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| || ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  16925965 gtggttgttttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 16926064  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  ||||| |||||||||||||| |||||||| || || ||||| ||||    
T  16926065 tttatgccaagttatctaagtgtgaattctggttgaaagaggtaagttttcttg 16926118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 18796709 - 18796496
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||| ||| ||||| || |||||||| ||||| ||||| || ||| | ||||||||    |||||||| || ||||| ||| | |||||| | |||||    
T  18796709 ctaatgtgcctggtgtgttcatggagtatatgaacagaattttccatgcctatctggataaatttgtggttgtattcattgataacattttgatctattc 18796610  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |   |||| ||||||||||| || ||| ||| ||||||||||||||| |||||||||||  |||| | ||  || ||||| |||||||| || |||||     
T  18796609 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 18796510  T
Q  290 aaggaagtgagttt 303  Q
    || |||||||||||    
T  18796509 aatgaagtgagttt 18796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 25608140 - 25608341
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || || || || || || |||||||||||| | || || |||||||| |||||      
T  25608140 tttatggagtacatgaattgcatctttcatgcatttttggatcgattcgtagttgtttttattgatgatattttgatttactccaagtctgaagaagaag 25608239  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||||||| |||||| || ||||| |||||||||||  || | | ||  || ||||| ||||||||||| |||||||| || || ||||| ||    
T  25608240 atgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggtaagttttct 25608339  T
Q  307 tg 308  Q
    ||    
T  25608340 tg 25608341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 27564160 - 27564313
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| |||||||| ||||| |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  27564160 gtggttgtgttcatcgatgaaattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 27564259  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || || |||||||||||||| |||||||| ||||| ||||| ||||    
T  27564260 tttatgctaaattatctaagtgtgaattctggttgaaagaagtaagttttcttg 27564313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 28261530 - 28261674
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28261530 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28261629  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcc 305  Q
      || ||||||||||||||||| |||||||| |||||||||||||    
T  28261630 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttcc 28261674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 28281075 - 28281231
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  28281075 ctaacgcgccgggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 28281174  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| | ||||||||| || ||| |||| |||||||||||||| ||||||||    
T  28281175 gaagactgaaggagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 28281231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 305
Target Start/End: Complemental strand, 28284386 - 28284242
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28284386 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28284287  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcc 305  Q
      || ||||||||||||||||| |||||||| |||||||||||||    
T  28284286 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttcc 28284242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 305
Target Start/End: Original strand, 28340279 - 28340423
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28340279 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28340378  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcc 305  Q
      || ||||||||||||||||| |||||||| |||||||||||||    
T  28340379 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttcc 28340423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 249
Target Start/End: Complemental strand, 19866754 - 19866547
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    ||||| ||||||| |||||||| |||   || ||||| ||||| ||  | ||||| || || || ||||||||||| |||||| | || || ||| | |     
T  19866754 gaacgcggtatggtcactatgaatataaagttatgccttttggtgttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatt 19866655  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 241  Q
    | |||| || |||||||| || || || |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||    
T  19866654 tttggatcgctttgtggttgtttttatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttg 19866555  T
Q  242 aaagagaa 249  Q
    ||||||||    
T  19866554 aaagagaa 19866547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 16961809 - 16961903
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || ||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  16961809 gtggttgttttcattgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 16961903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 18963310 - 18963384
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaat 124  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||| |||||||| ||||||||||||||||||    
T  18963310 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcaccaggtgtatttatggagtacatgaat 18963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 22435871 - 22435729
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||  | || || ||| || | ||||| |    
T  22435871 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttaatttactccaagactaaagaagaac 22435772  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||| ||||||| ||| |||||| |||||||| |||||||||||    
T  22435771 atgttgagcatctgaagattgtcttgcaagtgttgaaagagaa 22435729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 22444269 - 22444127
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||  | || || ||| || | ||||| |    
T  22444269 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttaatttactccaagactaaagaagaac 22444170  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||| ||||||| ||| |||||| |||||||| |||||||||||    
T  22444169 atgttgagcatctgaagattgtcttgcaagtgttgaaagagaa 22444127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 27189279 - 27189237
Alignment:
Q  266 ttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||    
T  27189279 ttgtccaagtgtgaattctggttgaaagaagtgagtttccttg 27189237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 27259961 - 27260003
Alignment:
Q  266 ttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||    
T  27259961 ttgtccaagtgtgaattctggttgaaagaagtgagtttccttg 27260003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 21929074 - 21929005
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| ||||| ||||  |||||||| |||||||| |||||||||  ||||| |||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttggttgcgggaagggagtttccttg 21929005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 26255922 - 26255821
Alignment:
Q  399 gtgtttgccgattccgcccaaaattgctttggtaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactc 498  Q
    |||||||||| ||| |||||||| || || || |  | ||||||||||| ||||||||  | |||||||| || | |||| ||||| |||||||||||||    
T  26255922 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 26255823  T
Q  499 ca 500  Q
    ||    
T  26255822 ca 26255821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 272; Significance: 1e-151; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 30139679 - 30139372
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30139679 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 30139580  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30139579 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 30139480  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  30139479 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 30139380  T
Q  301 tttccttg 308  Q
    ||||||||    
T  30139379 tttccttg 30139372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 30149230 - 30148923
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30149230 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 30149131  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30149130 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 30149031  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  30149030 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 30148931  T
Q  301 tttccttg 308  Q
    ||||||||    
T  30148930 tttccttg 30148923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 8272666 - 8272973
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272666 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 8272765  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  8272766 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 8272865  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||||    
T  8272866 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgag 8272965  T
Q  301 tttccttg 308  Q
    ||||||||    
T  8272966 tttccttg 8272973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 911 - 1601
Target Start/End: Complemental strand, 2803671 - 2802999
Alignment:
Q  911 tttgccatctccttggatttcaattgcagcaaaccttgatgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaaaag 1010  Q
    |||||||||||||||||||| | ||| ||||  || |||||||||||||   |||| ||||||||||| || | ||| |||||||||||||||||||||     
T  2803671 tttgccatctccttggattttagttgtagcaggccctgatgatgataattatcgagtcttttgtgccacaaatttgttacattttctttcatttgaaaaa 2803572  T
Q  1011 caatttgctcctcctccaatggatttagagcaaaactttttcctctcatttttactttgaaaatgtctttgccatcactatctttaatcaagcagctttc 1110  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||| |||||    
T  2803571 caatttgttcctcatccaatggatttagaggaaaactttttcctctcattttcactttgaaaatgtctttgtcatcaccatctttaaacaagcaactttc 2803472  T
Q  1111 attttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgatcaatttcagggacgtacaacacatcagaaattaacttt 1210  Q
     ||||||||||| | |||||| || ||||||| |||||| ||||||||          |||||||||||| |||| || |||||||||||||| ||||||    
T  2803471 gttttcaaacaaaattttatagcccctttcaattaattgaccaacact----------tgatcaatttcaaggacttataacacatcagaaatgaacttt 2803382  T
Q  1211 gtacctgaataggttgagattgctattgttccttttcctttcacagcaatgtaattgccattcccaacccgaacttttgttgagtttgcattgcttagtt 1310  Q
    |||| ||| ||||||||||||||||||||||||||| |||| ||| |||| || | |||||| ||||||||||| || | |||  |||||  ||||||||    
T  2803381 gtacttgactaggttgagattgctattgttcctttttcttttacaacaatatagtggccatttccaacccgaacattcgatgaacttgca-cgcttagtt 2803283  T
Q  1311 ccctgaataaattcttattatatgtcatgtggttggtacaaccactatcaatcagccaattctcacttgattcgatgctagagaaacatgttgcaacgaa 1410  Q
    |  ||||||||| |   |||| ||||||| |||| ||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||| ||| ||    
T  2803282 ctgtgaataaatcc---ttatgtgtcatggggttagtacaaccactgttaataaaccaattctcacttgattcgatgctagagaaacatgttgtaacaaa 2803186  T
Q  1411 taagtgatcctcctcttcctcttgatcaacaacctttgcctcatcattatgttgttgattcctattt-ttacaaataactgcttcatgccccatttgatt 1509  Q
     |||| |||||||   ||||||||| ||||| |||||||| ||||| ||| |||||||||| | ||| ||||| |||||  ||||| | |||||||||||    
T  2803185 caagtaatcctcc---tcctcttgaccaacatcctttgccccatcactattttgttgattcttttttcttacatataacaacttcacgtcccatttgatt 2803089  T
Q  1510 acacttggtacacttagcatcaggtcttctccaacatctaaagggtggatgacctttctttccacagtgttgacatggaggataagattttc 1601  Q
    ||||    | ||||||||||||||||||||||| | | |||| |||| |||||||||||||||||| |||||||| || |||||||||||||    
T  2803088 acac--aatgcacttagcatcaggtcttctccaccctataaatggtgaatgacctttctttccacaatgttgacaaggtggataagattttc 2802999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 249; E-Value: 1e-137
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 13965619 - 13965927
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13965619 gattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 13965718  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13965719 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 13965818  T
Q  201 aag-agcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtga 299  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||  || |||||||||||||| |||||||||||||||||||    
T  13965819 aagaagcatgctgagcatttgaggattgtgttgcaagacttgaaagagaaccagttgtctgccaatttgtctaagtgtgagttttggttgaaggaagtga 13965918  T
Q  300 gtttccttg 308  Q
    |||| ||||    
T  13965919 gttttcttg 13965927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 15611976 - 15611669
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15611976 gattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 15611877  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15611876 ggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 15611777  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||  |||||||||||| |||| ||||||||||||||||||||    
T  15611776 aagagcatgctgagcatttgaggattgtcttgcaagttttgaaagataaccggttgtgtgccaagttgtctaagcgtgagttttggttgaaggaagtgag 15611677  T
Q  301 tttccttg 308  Q
    ||||||||    
T  15611676 tttccttg 15611669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 244; E-Value: 1e-134
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 15948737 - 15949036
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  15948737 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaatgcgcca 15948836  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15948837 ggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaagtctgagg 15948936  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||    
T  15948937 aagagcatgttgagcatctgaggattgtgttgcaagtcttgaaagagaaccagttgtgagccaagttgtctaagtgtgaattttggttgaaggaagtgag 15949036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 6151120 - 6151427
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6151120 gattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcca 6151219  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  6151220 ggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgagg 6151319  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||  |||||||||||||| || ||||||||||||||||||||    
T  6151320 aggagcatgctgagcatctgacgattgtgttgcaagtgttgaaggagaaccagttatgtgctaagttgtctaagtgcgagttttggttgaaggaagtgag 6151419  T
Q  301 tttccttg 308  Q
    ||||||||    
T  6151420 tttccttg 6151427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 25768191 - 25767884
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| || || || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  25768191 gattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaattcgcca 25768092  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||||     
T  25768091 ggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaatctgaga 25767992  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  25767991 aggagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgag 25767892  T
Q  301 tttccttg 308  Q
    ||||||||    
T  25767891 tttccttg 25767884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 5e-63
Query Start/End: Original strand, 309 - 590
Target Start/End: Complemental strand, 2803996 - 2803712
Alignment:
Q  309 ttcagggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaacagcagtgtttgccg 408  Q
    |||| ||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||  | ||||    
T  2803996 ttcaaggagggtttgtaaccataccaagtctcgaatgacgtcttatcctttactgctcttgtaggaagcctattttgtagataaacaacagttatcgccg 2803897  T
Q  409 attccgcccaaaattgctttggtaagttcttctca----tgcagcatacatcgggtcatctccaatataaatctgtttcttctttcactaactccannnn 504  Q
    ||||||||||||||| ||| || ||||||||||||    |||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||||        
T  2803896 attccgcccaaaattacttgggcaagttcttctcatgcatgcaacatacatcgggtcatatccaatataaatatgtctcttctttcactaactccatttt 2803797  T
Q  505 nnngtggagtgtatggaacagtcaattgatgatgaatgccagcgtcatcacataatcgatcaaatgcttcagaagtatactctttg 590  Q
       ||||||||||| ||||  |||| | || |||||||| | | |||||||| ||| |||| ||||||||||||||||||||||||    
T  2803796 gttgtggagtgtat-gaacgatcaactaataatgaatgcaaacatcatcacaaaattgatctaatgcttcagaagtatactctttg 2803712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 92 - 308
Target Start/End: Complemental strand, 15261402 - 15261186
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| ||||| |||||||||||||||| |||||| ||||||||  |||| |||||  || | | ||  || ||||  ||||||||||| ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaa 15261203  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  15261202 agaggtgagttttcttg 15261186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 6710865 - 6710991
Alignment:
Q  182 gtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaat 281  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||||  || ||||| ||||| ||||| | ||  ||||||||||||||||| |    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagt 6710964  T
Q  282 tttggttgaaggaagtgagtttccttg 308  Q
    |||||||   |||||||||||||||||    
T  6710965 tttggttttgggaagtgagtttccttg 6710991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 14088457 - 14088239
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 14088258  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  14088257 agtgaagtgagttttcttg 14088239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 11950253 - 11950471
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||||||| || | |||||    
T  11950253 ctaatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattc 11950352  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| || ||||||| ||||||||||||||| |||||||||||  |||| | ||  |||||||| |||||||| || |||||     
T  11950353 taagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagttctggtta 11950452  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  11950453 agtgaagtgagttttcttg 11950471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 13970465 - 13970683
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || ||| ||||| |||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 13970664  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  13970665 agtgaagtgagttttcttg 13970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 74 - 303
Target Start/End: Complemental strand, 13254480 - 13254251
Alignment:
Q  74 atgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatg 173  Q
    ||||| ||||||||  | ||||| || || || ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || |    
T  13254480 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacg 13254381  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaa 273  Q
    |||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||    
T  13254380 atattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaa 13254281  T
Q  274 gtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||| |||||||| |||||||||||    
T  13254280 gtgtgaattctggttgaaagaagtgagttt 13254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 74 - 303
Target Start/End: Original strand, 20060394 - 20060623
Alignment:
Q  74 atgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatg 173  Q
    ||||| ||||||||  | ||||| || || || ||||||||||| |||||| | || || ||| | | |||||| || |||||||| ||||| || || |    
T  20060394 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggttgtgtttatcgacg 20060493  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaa 273  Q
    |||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||    
T  20060494 atattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaa 20060593  T
Q  274 gtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||||||||||| |||||||||||    
T  20060594 gtgtgaattttggttgaaagaagtgagttt 20060623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 15346618 - 15346814
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  15346618 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 15346717  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  15346718 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15346814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 15723307 - 15723503
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || |||||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  15723307 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15723406  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||| ||||||||||| |||||||| |||||||||||    
T  15723407 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 15723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 11889636 - 11889783
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||||||||| || ||||| ||||||||| | || |||||| | ||| | || || || ||||| |||||||| |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 237  Q
     |||| | ||||||| |||||||||||||||| |||||| ||||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 161 - 303
Target Start/End: Complemental strand, 10007303 - 10007161
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10007303 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10007204  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  10007203 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10007161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 15341026 - 15340825
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  15341026 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15340927  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| |||| ||| |||||||||||  |  | | ||  || |||||||||||||| || |||||||| ||||||||||| ||    
T  15340926 atgctgagcatctgaagattgtcttgcgagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttct 15340827  T
Q  307 tg 308  Q
    ||    
T  15340826 tg 15340825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 15400890 - 15401091
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  15400890 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15400989  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||| ||| |||||| |||| ||| |||||||||||  |  | | ||  || |||||||||||||| || |||||||| ||||||||||| ||    
T  15400990 atgctgagcatctgaagattgtcttgcgagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttct 15401089  T
Q  307 tg 308  Q
    ||    
T  15401090 tg 15401091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 16258774 - 16258709
Alignment:
Q  243 aagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||| ||||| |||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  16258774 aagagaatcagttgtgtgcaaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttg 16258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 17491607 - 17491414
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||| ||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||  | || || |||||||| ||||| |    
T  17491607 tttatgaagtacatgaatcgcatctttcattcatttttggatcggttcgtggttgtttttattgatgatattttaatttactccaagtctgaagaagaac 17491508  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||||||||    
T  17491507 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 17491414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 18915361 - 18915292
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| |||||| |||||||||  |||||||| |||||||||||||||||||||||||| ||||||||||    
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttggttgaaggaagtaagtttccttg 18915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 28756102 - 28755949
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| |||||    
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 28755949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 15587765 - 15587961
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  15587765 tttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 15587864  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  15587865 atgttgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15587961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 55498570 - 55498486
Alignment:
Q  156 tggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtctt 240  Q
    |||||||||| || |||||||| || |||||||||||||| |||||  ||||||| |||||||| ||||||||||||||| ||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 6602439 - 6602292
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| | || ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  6602439 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatg 6602340  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| ||||||||||||||||    
T  6602339 ctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttg 6602292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 12888412 - 12888265
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| ||||| |||||  ||| |||||| || ||||| |||||||||||  |  | | ||    
T  12888412 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgccgagcacctgaagattgtcttacaagtgttgaaagagaagaaactttatg 12888313  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
     ||| ||||||||||||||||| |||||||| ||||||||||| ||||    
T  12888312 caaaattgtctaagtgtgaattctggttgaaagaagtgagtttacttg 12888265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 308
Target Start/End: Complemental strand, 41179295 - 41179088
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | ||||||||| |||| |    
T  41179295 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaagactgaag 41179196  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||| | || ||| |||| |||||| ||||||| |||||||||||  |||| | ||  || ||||| || ||||| |||||| | |  ||||||||    
T  41179195 aagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgag 41179096  T
Q  301 tttccttg 308  Q
    ||||||||    
T  41179095 tttccttg 41179088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 5109038 - 5109180
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||| ||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||| ||  || | | ||    
T  5109038 gtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagaaaagaagctttatg 5109137  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  5109138 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 5109180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 303
Target Start/End: Complemental strand, 10907913 - 10907771
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10907913 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattttgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10907814  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  10907813 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10907771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 16637464 - 16637334
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  16637464 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16637365  T
Q  273 agtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||| |||||||| |||||||||||    
T  16637364 agtgtgaattctggttgaaagaagtgagttt 16637334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 17188158 - 17187940
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| | ||| ||||    |||||||| || ||||| ||||| ||| || | |||||    
T  17188158 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctatttggataaatttgtggttgtattcattgatgacattctgatttattc 17188059  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     | | |||||||||||||||| || ||| |||  ||||| |||||||| |||||||||||  |||| | ||  || ||||| |||||||| || |||||     
T  17188058 aaggactgaggaagagcatgcagaacatctgaaaattgtattgcaagtattgaaagagaaaaagttgtatgccaaattgtcgaagtgtgagttctggtta 17187959  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  17187958 agtgaagtgagttttcttg 17187940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 48427138 - 48427008
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  || | | ||  || |||||||    
T  48427138 gatattttgatctactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtcta 48427039  T
Q  273 agtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||| |||||||| |||||||||||    
T  48427038 agtgtgaattctggttgaaagaagtgagttt 48427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 12795871 - 12795802
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||||||| || ||||  ||||||||||||||||| | ||||||||||||||||||||| ||||    
T  12795871 ttgaaagagaaccaattgtgtgccaagttgtctaagtgtgagtcttggttgaaggaagtgagttttcttg 12795802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 47125728 - 47125575
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  47125728 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatctattc 47125629  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  47125628 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 47125575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 13943808 - 13943652
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  13943808 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 13943709  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| ||||||||||| || ||| |||| ||| || ||||||| ||||||||    
T  13943708 gaagactgaagaagagcatgcagaacatctgagaattatgctgcaagttttgaaaga 13943652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 15229387 - 15229231
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||||||  |||| |||||||| |||||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15229387 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15229288  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||    
T  15229287 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaaga 15229231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 15235255 - 15235099
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||||||  |||| |||||||| |||||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15235255 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15235156  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||    
T  15235155 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaaga 15235099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 44779031 - 44778875
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||  |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  44779031 ctaacgcgcccggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 44778932  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  44778931 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 44778875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 249
Target Start/End: Original strand, 14874875 - 14875014
Alignment:
Q  110 atggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    ||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || ||| |||| ||||| ||||    
T  14874875 atggagtacatgaatcgcatctttcatgcctttttggatcgattcgtggttgtttttatcgatgatattttgatttactccaagactgaagaagaacatg 14874974  T
Q  210 ctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| ||| |||||| |||||||| |||||||||||    
T  14874975 ctgagcatctgaagattgtcttgcaagtgttgaaagagaa 14875014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 15014072 - 15014330
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||| || || |||||||| || |||||| | || |||||| ||||| |||| |    
T  15014072 tatggacattacgaatattcggtgatgcctttcggtgttactaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatc 15014171  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | ||||| || ||||| || ||||||||| |  | || || ||| | ||||| || ||||| |||||||  || ||||| ||||||||  |||| |||||    
T  15014172 gatttgttgttgtgtttatagatgatattctaatatactctaagaccgaggaggaacatgccgagcattgtagaattgttttgcaagtgctgaaggagaa 15014271  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||| ||  ||||| || ||||| ||||| |||||||| ||||||||||| ||||    
T  15014272 gaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttcttg 15014330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1114 - 1172
Target Start/End: Original strand, 26711462 - 26711520
Alignment:
Q  1114 ttcaaacaacactttataacctctttcaagtaattgcccaacacttaacaaattctgat 1172  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||| ||||    
T  26711462 ttcaaacaacactttgtaacctttttcaagtaattgcccaacactcaacagattttgat 26711520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 11959514 - 11959727
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||| || |||||||| || || ||| ||| ||||||    ||| | || ||||| || |||||||||||  | |||||    
T  11959514 ctaatgcgcctggtgtgtttatggaatatatgaataggattttccatgcttttctggataaatttctagttgtgtttattgatgatattttaatctattc 11959613  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||| ||   ||| | || ||||||||| || |||||||| |||||     
T  11959614 caagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgaattctggtta 11959713  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  11959714 agtgaagtgagttt 11959727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 248
Target Start/End: Original strand, 13318828 - 13319005
Alignment:
Q  71 gtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatgg 170  Q
    ||||||||||| || ||  |||||||||| ||||| || |||||||| |||||  |||| |||||| ||| ||||||    ||||||||||| || || |    
T  13318828 gtgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattg 13318927  T
Q  171 atgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagaga 248  Q
    ||||||||||  | ||||| ||| || | || |||||||| || ||| ||| |||| |||||||| | ||||||||||    
T  13318928 atgatattttaatttattccaagactaaagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagaga 13319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 53383439 - 53383592
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || || || |||||||||||  |      
T  53383439 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcggaacatctgaagattgtcttacaggtgttgaaagagaagaaac 53383538  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || ||||||||||||||||| |||||||| ||||||||||||||||    
T  53383539 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttg 53383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 55514237 - 55514306
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| || |||||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttg 55514306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 12358967 - 12359090
Alignment:
Q  185 tattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaatttt 284  Q
    ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||| | ||  |||||||| |||||||| || |    
T  12358967 tattcaaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 12359066  T
Q  285 ggttgaaggaagtgagtttccttg 308  Q
    |||| |  ||||||||||| ||||    
T  12359067 ggttaagtgaagtgagttttcttg 12359090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 308
Target Start/End: Original strand, 5423358 - 5423504
Alignment:
Q  162 tgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtga 261  Q
    ||||||| || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||     
T  5423358 tgttcatcgacgatatcttgatttactctaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgc 5423457  T
Q  262 aaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
     || ||||||||||||||||| | |||||| ||||||||||||||||    
T  5423458 taaattgtctaagtgtgaattcttgttgaatgaagtgagtttccttg 5423504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 12180017 - 12179904
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||| | ||  |||||||| |||||||| || ||||| |  ||    
T  12180017 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 12179918  T
Q  295 agtgagtttccttg 308  Q
    ||||||||| ||||    
T  12179917 agtgagttttcttg 12179904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 16755074 - 16755275
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  16755074 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttattgacgatattttgatttactccaagactgaagaagaac 16755173  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    |||| || ||||||| |||||| || ||||| |||||||||||  |  | | ||  || |||| |  ||||||||| |||||||| ||||||||||||||    
T  16755174 atgcggaacatttgaagattgttttacaagtgttgaaagagaagaaactttatgctaaattgtttgtgtgtgaattctggttgaatgaagtgagtttcct 16755273  T
Q  307 tg 308  Q
    ||    
T  16755274 tg 16755275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 16379273 - 16379429
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| | | ||||||    ||  ||||||| || || ||||||||| || | |||||    
T  16379273 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaattcctggtggtatttattgatgatattctgatttattc 16379372  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| || | ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  16379373 taagacttaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaaga 16379429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 10385393 - 10385302
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
    ||||| ||||||||||| |||||||| ||| | ||||| |||   |||||||||||||| | |||| |||| ||||| |||||||| |||||    
T  10385393 tttgttgtggtgttcattgatgatatcttgatttattccaagaacgaggaagagcatgcagggcatctgagaattgtattgcaagtgttgaa 10385302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 16328067 - 16328218
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    ||||| |||||||| || |||||||||||  | ||||| |||  ||| || |||||||| |||||| |||| ||||| |||||||  |||||||||||      
T  16328067 tttgttgtggtgtttattgatgatattttaatctattctaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaaga 16328166  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
     ||| | || ||||||||| || ||||| || ||||| |  |||||||||||    
T  16328167 ggttgtatgcaaagttgtcaaaatgtgagttatggttaagtgaagtgagttt 16328218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 268; Significance: 1e-149; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 42533 - 42226
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  42533 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcta 42434  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  42433 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 42334  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  42333 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 42234  T
Q  301 tttccttg 308  Q
    ||||||||    
T  42233 tttccttg 42226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 31797 - 32015
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 31996  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  31997 agtgaagtgagttttcttg 32015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 264; Significance: 1e-146; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-146
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 24829756 - 24830063
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829756 gattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 24829855  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  24829856 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 24829955  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||||||    
T  24829956 aagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttcaaggaagtgag 24830055  T
Q  301 tttccttg 308  Q
    ||||||||    
T  24830056 tttccttg 24830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 5 - 308
Target Start/End: Complemental strand, 22279976 - 22279673
Alignment:
Q  5 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 104  Q
    ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22279976 agagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtg 22279877  T
Q  105 tctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaaga 204  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  |||| ||    
T  22279876 tctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaaatcgaaggagga 22279777  T
Q  205 gcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttc 304  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22279776 gcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttgaaggaagtgagtttc 22279677  T
Q  305 cttg 308  Q
    ||||    
T  22279676 cttg 22279673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 24568237 - 24568543
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  24568237 attagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcatcag 24568336  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||    
T  24568337 gtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaagtctgagga 24568436  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
     ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||| ||||  ||||||||||    
T  24568437 ggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttagttgcgggaagtgagt 24568536  T
Q  302 ttccttg 308  Q
    |||||||    
T  24568537 ttccttg 24568543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 22760138 - 22760444
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  22760138 attagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccgatgcgctag 22760237  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  22760238 gtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaatctgagga 22760337  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
     ||||||||| ||||| ||||||||||||||||||| ||| | ||||||||||||||||  ||||||||||||||| | ||||||||| |||||||||||    
T  22760338 ggagcatgctaagcatctgaggattgtgttgcaagttttggaggagaaccagttatgtgctaagttgtctaagtgtaagttttggttgcaggaagtgagt 22760437  T
Q  302 ttccttg 308  Q
    |||||||    
T  22760438 ttccttg 22760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 184; E-Value: 7e-99
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 25130484 - 25130181
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  25130484 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaatgcgcca 25130385  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||  |||| || ||||||||||||||||||||||  |||||||| |||||||||||||| ||  ||||||||||||| ||| ||||||||||||    
T  25130384 ggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaagtctgagg 25130285  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||| ||||||||| |||||| || ||||| | ||||||||  |||||||  |||||||| |||||||||  | |||||||    
T  25130284 aggagcatgctgagcatttgagggttgtgttgcgagtcttaaaggagaatcggttatgtgctaagttgttgaagtgtgagttttggttgcggaaagtgag 25130185  T
Q  301 tttc 304  Q
    ||||    
T  25130184 tttc 25130181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 551 - 1080
Target Start/End: Complemental strand, 13813012 - 13812516
Alignment:
Q  551 atcacataatcgatcaaatgcttcagaagtatactctttggcattgtctgatctgagagcttgaattttacaaccactttcattctccgctcttgctttg 650  Q
    |||||| |||||||| ||||||| ||||||||||| |||  ||||||||||||| ||||||||||||||| |||||||   | ||||| |||| ||||||    
T  13813012 atcacagaatcgatcgaatgctttagaagtatacttttttccattgtctgatctaagagcttgaattttaaaaccactcctactctccactctagctttg 13812913  T
Q  651 at-ttccaaaatacttgtgctacctctgacttgtgcttcagaaagaaaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactac 749  Q
    |  ||||||||||||||||||                | ||||||||  ||||||||||||  ||||||||||||||||||||    |||||||||||||    
T  13812912 aagttccaaaatacttgtgct----------------ttagaaagaat-tccaacacatactagtaaaatcatcaatgaatat----taataaagactac 13812834  T
Q  750 cattcaaagaagatgttctttgtgggcctgcaatgttagtatgaattaattgcaacttcattgttgctctccaagttgtctttggaaatggcttcctgct 849  Q
    ||||    |||| ||||||||||| |||||||||          ||||| ||||||| | ||||| || |||| |||| ||||||| |||||||| ||      
T  13812833 cattt---gaaggtgttctttgtgagcctgcaat----------attaagtgcaactcctttgttactatccatgttgcctttggatatggcttcgtggg 13812747  T
Q  850 ttgctttccaaactgacaagccttgcaatttgaaatatggttatcaagttctggaatgtcatttgccatctccttggatttcaattgcagcaaaccttga 949  Q
    ||||||| ||| || |||||| ||| | |||| | |||||| |||||||| |||||  ||||||||| || |||||||||| || || |||| ||| |||    
T  13812746 ttgcttttcaatctaacaagctttggagtttgcagtatggtcatcaagttatggaagatcatttgccttcaccttggattttaactgtagcagaccctga 13812647  T
Q  950 tgatgataatgcccgagccttttgtgccataagtctgtgacattttctttcatttgaaaagcaatttgctcctcctccaatggatttagagcaaaacttt 1049  Q
    ||||||||||| | || ||| |||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||| ||| || |    
T  13812646 tgatgataatgtctgatcctattgtgccacaagtctgtgacattttctttcatttggaaaacaatttgctcttcctccaatgaatttagagaaaatctct 13812547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 6e-47
Query Start/End: Original strand, 28 - 308
Target Start/End: Original strand, 10037927 - 10038207
Alignment:
Q  28 caaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaataga 127  Q
    |||||| || || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||| ||||||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  128 atatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattg 227  Q
    || || ||||||||| |||| |  ||| |||||||||| || || ||||| ||| ||||||||||||| ||||| |||||||| |||||| | |||||||    
T  10038027 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattg 10038126  T
Q  228 tgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||    |||||||||||  |||| | ||| |||||||| |||||||| |||| ||||  |||||||||||||||||    
T  10038127 tgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttg 10038207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 28 - 308
Target Start/End: Original strand, 10098312 - 10098592
Alignment:
Q  28 caaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaataga 127  Q
    |||||| || || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||| ||||||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  128 atatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattg 227  Q
    || || ||||||||| |||| |  ||| |||||||||| || || ||||| ||| ||||||||||||| ||||| |||||||| |||||| | |||||||    
T  10098412 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattg 10098511  T
Q  228 tgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||    |||||||||||  |||| | ||| |||||||  |||||||| |||| ||||  |||||||||||||||||    
T  10098512 tgttgcatactttgaaagagaataagttgtttgataagttgttaaagtgtgagttttagttgcgggaagtgagtttccttg 10098592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 23112522 - 23112324
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||||||  |||| ||||||||||||||||||||||| || ||| |||||||||| |  ||||| || ||||| || |||||||| ||| | |||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattc 23112423  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||||| | ||||||||||||||| ||||| || ||  |||| | ||  |||||||| || |||||||| |||||    
T  23112422 taagactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 23112324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 24818847 - 24819105
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||||||| ||||| | || |||||| | ||| | || |    
T  24818847 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 24818946  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  24818947 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 24819046  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || | | ||  |||||||| ||||||||| | |||||||| ||||| ||||| ||||    
T  24819047 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttg 24819105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 65 - 303
Target Start/End: Original strand, 30010816 - 30011054
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 164  Q
    |||||||||||||| ||  | ||  ||||||||||||| || |||||| | || |||||| | || |||||| |||||||||| |||||||| || ||||    
T  30010816 tattctgtgatgcctttcagtgttactaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgt 30010915  T
Q  165 tcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaa 264  Q
    | || |||||||||||| | || || ||||| ||||| || ||||  ||||||||||| ||||| ||||||||  || |||||||  |||||| ||  ||    
T  30010916 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgcaagagaagaagttatatgccaa 30011015  T
Q  265 gttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||| || | ||| ||||| |||||||| |||||||||||    
T  30011016 gttatcgatgtgcgaattctggttgaacgaagtgagttt 30011054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 23098675 - 23098888
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||||| || |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| |||||| |||||||||| || || ||  ||||||||||   ||| | ||  |||||||| || |||||||| |||||     
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaatgttgtatgctaagttgtcgaaatgtgaattctggtta 23098874  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  23098875 agtgaagtgagttt 23098888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 12639039 - 12639108
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttg 12639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 24711803 - 24711607
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  24711803 tttatggagtatatgaatcgcattttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 24711704  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  24711703 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24711607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 27372993 - 27372842
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  27372993 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 27372894  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  27372893 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27372842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 41607104 - 41607255
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  41607104 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 41607203  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  41607204 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 41607255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 43371815 - 43371732
Alignment:
Q  312 agggagggtttataaccataccaagcctcaaatggcgtcttatcctttactgctcttgtaggaagcctattttgcaaataaaca 395  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||||||||||||| |||||||||||| ||||||| ||| ||||||    
T  43371815 agggagggtttgtaaccatatcaaacctcaaatgacgtcttatcctttactgttcttgtaggaagtctattttacaattaaaca 43371732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 27789526 - 27789308
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  27789526 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 27789427  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    |||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||| | ||  || ||||| || ||||| |||||| |     
T  27789426 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 27789327  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||||||||    
T  27789326 agtgaagtgagtttccttg 27789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 65 - 303
Target Start/End: Original strand, 30209549 - 30209787
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 164  Q
    |||| ||||||||| || || ||  |||||||||  || || |||||||| || ||||||   || |||||| |||||||||| |||||||| || ||||    
T  30209549 tattttgtgatgcctttcggtgttactaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgt 30209648  T
Q  165 tcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaa 264  Q
    | || |||||||||||| | || || ||||| ||||| || ||||  || |||||||| ||||| || |||||  ||||||||||  |||||| ||  ||    
T  30209649 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgaacatttgagaattgtttttcaagtgctgaaagagaagaagttatctgccaa 30209748  T
Q  265 gttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||| || ||||| ||||| |||||||| |||||||||||    
T  30209749 gttatcgaagtgcgaattctggttgaacgaagtgagttt 30209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 1065537 - 1065384
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||| |||| || ||| ||| ||||||    ||||||||||| || || |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 1065384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 27219785 - 27219589
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  27219785 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 27219686  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  27219685 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 21143769 - 21143916
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  21143769 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 21143868  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || |||||||||||||| || |||||||| ||||||||||| ||||    
T  21143869 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 21143916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 23106402 - 23106595
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| |  || ||||| || ||||| |||||||||||| | || || |||||||| ||||| |    
T  23106402 tttatggagtacatgaatcgcatttttcatgcatttttggatcagttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaagaac 23106501  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||| ||||| ||||| || ||||||||    
T  23106502 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattatggttaaaagaagtgag 23106595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 10870619 - 10870423
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  10870619 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 10870520  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  10870519 atgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10870423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 164 - 308
Target Start/End: Original strand, 24875481 - 24875625
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  |    
T  24875481 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 24875580  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||| ||||||||||| ||||    
T  24875581 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 24875625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 16927063 - 16926928
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  16927063 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16926964  T
Q  273 agtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||| |||||||| || |||||||||||||    
T  16926963 agtgtgaattctggttgaaagaggtgagtttccttg 16926928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 17000703 - 17000568
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  17000703 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 17000604  T
Q  273 agtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||| |||||||| || |||||||||||||    
T  17000603 agtgtgaattctggttgaaagaggtgagtttccttg 17000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 24264094 - 24263943
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| || || |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  24264094 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaaagagaaga 24263995  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    || | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  24263994 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24263943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 9485919 - 9485789
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||  || |||||||    
T  9485919 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 9485820  T
Q  273 agtgtgaattttggttgaaggaagtgagttt 303  Q
    |||||||||| |||||||| |||||||||||    
T  9485819 agtgtgaattctggttgaaagaagtgagttt 9485789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 44384298 - 44384440
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  44384298 gtgttcatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 44384397  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      || ||||||||||||||||| |||||||| |||||||||||    
T  44384398 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 44384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 303
Target Start/End: Complemental strand, 23278562 - 23278349
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| ||||||||||   ||| ||||| || || || ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||| | ||  |||||||| ||||| || || |||||     
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggtta 23278363  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  23278362 agtgaagtgagttt 23278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 31832444 - 31832291
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  31832444 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 31832345  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  31832344 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 31832291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 12576139 - 12575983
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| || |||||||| |||||| |||| |||||| ||| | ||||    || |||||||| || || ||||| ||| || | |||||    
T  12576139 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattc 12576040  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    |||| |||| ||||||||||| || ||| |||| |||||||||||||| ||||||||    
T  12576039 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 12575983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 22323618 - 22323726
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||    
T  22323618 ctgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaaga 22323717  T
Q  295 agtgagttt 303  Q
    |||||||||    
T  22323718 agtgagttt 22323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 22734511 - 22734641
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||||||  | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||    
T  22734511 gatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 22734610  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||||| |||| |||||||| ||||||||    
T  22734611 ctaagtgtaaattctggttgaaagaagtgag 22734641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 24706213 - 24706298
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  24706213 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 24706298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 45534610 - 45534513
Alignment:
Q  206 catgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||| ||||||||||| ||||| ||||||||  ||||||||||  |||||| ||  ||||| || ||||| ||||| |||||||| |||||||||||    
T  45534610 catgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttt 45534513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 23295659 - 23295508
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || ||||| ||  || | ||||| ||| |||| ||||||||||| || ||| ||| ||||||||| ||||| |||||||||||      
T  23295659 tttgtggttgtgtttattgatgacatcctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaa 23295560  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| | ||  |||||||| |||||||| || ||||| |  |||||||||||    
T  23295559 agttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttt 23295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 24950296 - 24950165
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    ||||||||| || | ||||| ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||| | ||  |||||||    
T  24950296 gatgatattctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgt 24950197  T
Q  270 ctaagtgtgaattttggttgaaggaagtgagt 301  Q
    | |||||||| || ||||| |  |||||||||    
T  24950196 cgaagtgtgagttatggttaagtgaagtgagt 24950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 9337351 - 9337209
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  9337351 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaac 9337252  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||| ||| |||||| || ||||| |||||||||||    
T  9337251 atgctgagcatctgaagattgtcttacaagtgttgaaagagaa 9337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 23189621 - 23189545
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||| | || || ||| |||||||||| |||||||||||| ||| |||||| || ||||| |||||||||||    
T  23189621 gatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaa 23189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 21323997 - 21324082
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| ||||| |||||    
T  21323997 ttcatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaggagaa 21324082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 24677201 - 24677116
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| || ||||||||    
T  24677201 ttcatcgatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttaaaagagaa 24677116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 27208894 - 27208987
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagaga 248  Q
    ||||||||||| || |||||||||||| | ||||| ||| |||| || | |||||| |||||  ||| ||||||||||||  | ||||||||||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgcagattttgaaagaga 27208987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 260; Significance: 1e-144; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 26297 - 26604
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26297 gattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcca 26396  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26397 ggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 26496  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  26497 aagagcatgctgaacatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgag 26596  T
Q  301 tttccttg 308  Q
    ||||||||    
T  26597 tttccttg 26604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 258; Significance: 1e-143; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 5837 - 6146
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5837 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 5936  T
Q  101 ggtgtctttatggag-tacatgaata-gaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctga 198  Q
    ||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5937 ggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctga 6036  T
Q  199 ggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  6037 ggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtg 6136  T
Q  299 agtttccttg 308  Q
    ||||||||||    
T  6137 agtttccttg 6146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 14281 - 14168
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||| | ||  |||||||| |||||||| || ||||| |  ||    
T  14281 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 14182  T
Q  295 agtgagtttccttg 308  Q
    ||||||||| ||||    
T  14181 agtgagttttcttg 14168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 248; Significance: 1e-137; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 7892 - 8199
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7892 gattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 7991  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||||| ||||    
T  7992 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaagtcggagg 8091  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||    
T  8092 aagagcatgttgagcatctgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgtgttttggttgaaggaagtgag 8191  T
Q  301 tttccttg 308  Q
    ||||||||    
T  8192 tttccttg 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 16298 - 16100
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  16298 ctaatgcgcctggtgtgtttatggagtatatgaacggaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 16199  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     | | |||| ||||||||||| |||||| ||| |||||| |||||||| ||||| || ||   ||| | ||  |||||||| || ||||||||||||||    
T  16198 tacgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaagaggttgtatgccaagttgtcaaaatgtgaattttggtt 16100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 245; Significance: 1e-135; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 8 - 308
Target Start/End: Original strand, 8864 - 9164
Alignment:
Q  8 gtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 107  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8864 gtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtct 8963  T
Q  108 ttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagca 207  Q
    ||||||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  8964 ttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 9063  T
Q  208 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcctt 307  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||    
T  9064 tgctgagcatttgaggattgtgttgcaagtattgaaagagaactagttatgtgttaagttatctaagtgtgagttttggttgaaggaagtgagtttcctt 9163  T
Q  308 g 308  Q
    |    
T  9164 g 9164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 308
Target Start/End: Complemental strand, 40858 - 40600
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||||||||||||| | || |||||| | | | |||| |    
T  40858 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 40759  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| |||||  | ||||| ||||| |||||  | || || ||| | |||||||| |||||||||||||||| || ||| |||||||| |||||||||||    
T  40758 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaa 40659  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |  | | ||  || || |||||||||||||| |||||||| || |||||||| ||||    
T  40658 gaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttg 40600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 308
Target Start/End: Complemental strand, 74578 - 74320
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||||||||||||| | || |||||| | | | |||| |    
T  74578 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 74479  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| |||||  | ||||| ||||| |||||  | || || ||| | |||||||| |||||||||||||||| || ||| |||||||| |||||||||||    
T  74478 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaa 74379  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |  | | ||  || || |||||||||||||| |||||||| || |||||||| ||||    
T  74378 gaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttg 74320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 249
Target Start/End: Complemental strand, 55981 - 55782
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || ||||||||||||||||||   || |||||| | | | | || |    
T  55981 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcccctggagtgtttatggagtacatgaatcacatttttcatgcattttttgatc 55882  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| |||||||||||    
T  55881 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagagaa 55782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 243; Significance: 1e-134; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 1984 - 2290
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1984 attagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaatgcaccag 2083  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  2084 gtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaagtctgagga 2183  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||    
T  2184 agagcatgctgagcatttgaggattatgttgcaggtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttggaggaagtgagt 2283  T
Q  302 ttccttg 308  Q
    |||||||    
T  2284 ttccttg 2290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 5 - 308
Target Start/End: Complemental strand, 26598 - 26296
Alignment:
Q  5 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 104  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  26598 agagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtg 26499  T
Q  105 tctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaaga 204  Q
    |||| ||||| || |||||||||||||||||||||| ||||||||||||||||||| |||| ||  |||| ||||||||||||||||||   |||||  |    
T  26498 tcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaagatcgaggagta 26399  T
Q  205 gcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttc 304  Q
    ||||| |||||| ||||| |||||||||   ||||||||||| ||  |||| |  |  ||||| || |||||||| |||||||||  |||||||| ||||    
T  26398 gcatgttgagca-ttgagaattgtgttgggtgtcttgaaagaaaagaagttgttagctaagttttcgaagtgtgagttttggttgcgggaagtgactttc 26300  T
Q  305 cttg 308  Q
    ||||    
T  26299 cttg 26296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 240; Significance: 1e-132; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 132520 - 132827
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  132520 gattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaatgcgccc 132619  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| || || ||||||||||| ||||||||||||| |||||    
T  132620 ggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaagtttgagg 132719  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  132720 aagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgag 132819  T
Q  301 tttccttg 308  Q
    ||||||||    
T  132820 tttccttg 132827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 85; E-Value: 9e-40
Query Start/End: Original strand, 160 - 304
Target Start/End: Complemental strand, 25942 - 25798
Alignment:
Q  160 ggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgt 259  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  260 gaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttc 304  Q
    |  |||||  |||||||||| ||||||||| ||||||| ||||||    
T  25842 gctaagtttcctaagtgtgagttttggttgcaggaagtaagtttc 25798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 77; E-Value: 5e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26042 - 25938
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  26042 gattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgcca 25943  T
Q  101 ggtgt 105  Q
    |||||    
T  25942 ggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 85451 - 85560
Alignment:
Q  191 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttga 290  Q
    |||||||| ||||| |||||||||||||||| | |||| |||||||| |||||||||||  || | | ||  || ||||||||||| ||||| |||||||    
T  85451 aagtctgaagaagaacatgctgagcatttgaagcttgttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttga 85550  T
Q  291 aggaagtgag 300  Q
    | ||||||||    
T  85551 aagaagtgag 85560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 236; Significance: 1e-130; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 24451 - 24144
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  24451 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaatgcgcta 24352  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  24351 ggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaatctgagg 24252  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  24251 aggagcatgctgagcatttgaggattgtgttgcaagttttgaaggggaaccagttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgag 24152  T
Q  301 tttccttg 308  Q
    ||||||||    
T  24151 tttccttg 24144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 8189 - 7996
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || | |||||| ||||| |    
T  8189 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccatgtctgaagaagaac 8090  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||| ||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||||||||    
T  8089 atgctaagcatttgaagctagttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 232; Significance: 1e-127; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 6960 - 7267
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  6960 gattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcacca 7059  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| || ||||| ||||||| |||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||| |||||||||||    
T  7060 ggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaagtctgagg 7159  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  7160 aggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgag 7259  T
Q  301 tttccttg 308  Q
    ||||||||    
T  7260 tttccttg 7267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 224; Significance: 1e-122; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 224; E-Value: 1e-122
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 834 - 1140
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  834 gattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaatgcgcca 933  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    | |||||| ||||| || |||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  934 gttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaagtctgagg 1032  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||    
T  1033 aggagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtcgaagtgtgaattttggttgcaggaagtgag 1132  T
Q  301 tttccttg 308  Q
    ||||||||    
T  1133 tttccttg 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 220; Significance: 1e-120; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 1915 - 2213
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  1915 gattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaatgcacca 2014  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  2015 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaatctgagg 2114  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  2115 a---------cgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgagttttggttgcgggaagtgag 2205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 220; Significance: 1e-120; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 16320 - 16029
Alignment:
Q  14 gcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatgg 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| ||||    
T  16320 gcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaatgcgtcaggtgtcttcatgg 16221  T
Q  114 agtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctga 213  Q
    | |||||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||| |||    
T  16220 aatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaagtctgaggaggagcatgttga 16121  T
Q  214 gcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcc 305  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||||||| |||||||||||||||    
T  16120 gcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtttacgtgtgaattttggttgcaggaagtgagtttcc 16029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 207; Significance: 1e-112; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 207; E-Value: 1e-112
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 977 - 1283
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  977 gattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaatgcgcca 1076  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||| |||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||    
T  1077 ggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaagtctgagg 1176  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  || ||||| |||||||| |||| |||| || |||||||    
T  1177 aggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccaattatgtgctaaattgtcgaagtgtgagttttagttgcagaaagtgag 1276  T
Q  301 tttcctt 307  Q
    |||||||    
T  1277 tttcctt 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 4571 - 4502
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| ||||| ||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttg 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 279
Target Start/End: Complemental strand, 378 - 104
Alignment:
Q  5 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 104  Q
    ||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  105 tctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaaga 204  Q
    |||| || ||||| ||||||||||||||||||||||||||| || |||||||||||||||| || ||||||||||||| ||||| ||| |||||||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaaga 179  T
Q  205 gcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtga 279  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||  |||||||||||||||||    
T  178 gcatgctgagcatttgaggattatgttgcaagtcttgaaggagaactagttatgtgctaagttgtctaagtgtga 104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 31455 - 31760
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||| ||||    
T  31455 attagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccag 31554  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||||||    
T  31555 gtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgagga 31654  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
    |||||||||||||||||||||||||||  ||| | ||||||| ||||||||||||||||  |||||||| |||||||| |||||||||  ||||||||||    
T  31655 agagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttgcgggaagtgagt 31753  T
Q  302 ttccttg 308  Q
    |||||||    
T  31754 ttccttg 31760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 2 - 289
Target Start/End: Original strand, 21879 - 22165
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||| ||||    
T  21879 attagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccag 21978  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||||||    
T  21979 gtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgagga 22078  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    |||||||||||||||||||||||||||  ||| | ||||||| ||||||||||||||||  |||||||| |||||||| |||||||||    
T  22079 agagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttg 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 183; E-Value: 3e-98
Query Start/End: Original strand, 52 - 306
Target Start/End: Complemental strand, 7438 - 7184
Alignment:
Q  52 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgt 151  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||||| |||||| |||||||||||||| |||||||| |||||||| ||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    |||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttcct 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 1652 - 1888
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||| || |||||||||    
T  1652 gattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaatgcgcca 1751  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  1752 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 1851  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagt 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  1852 aagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 7037 - 7339
Alignment:
Q  2 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 101  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  7037 attagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaatgcgccag 7136  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagga 201  Q
    || |||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  7137 gtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgagga 7236  T
Q  202 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagt 301  Q
     |||||||||||||||||     ||||| | | ||||||||| ||||| ||||||||||  ||||||||||||| ||| ||||||||  |||||||||||    
T  7237 ggagcatgctgagcattt----tttgtgctacgagtcttgaaggagaatcagttatgtgttaagttgtctaagtttgagttttggttataggaagtgagt 7332  T
Q  302 ttccttg 308  Q
    |||||||    
T  7333 ttccttg 7339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 112; Significance: 7e-56; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 112; E-Value: 7e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7019 - 6888
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 100  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7019 gattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 6920  T
Q  101 ggtgtctttatggagtacatgaatagaatatt 132  Q
    |||||||||||||| |||||||||||||||||    
T  6919 ggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 97; Significance: 6e-47; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 97; E-Value: 6e-47
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 9143 - 8863
Alignment:
Q  28 caaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaataga 127  Q
    |||||| || || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||| ||||||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  128 atatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattg 227  Q
    || || ||||||||| |||| |  ||| |||||||||| || || ||||| ||| ||||||||||||| ||||| |||||||| |||||| | |||||||    
T  9043 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattg 8944  T
Q  228 tgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||    |||||||||||  |||| | ||| |||||||| |||||||| |||| ||||  |||||||||||||||||    
T  8943 tgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 87; Significance: 6e-41; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 87; E-Value: 6e-41
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 9114 - 9372
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||||||||| |||||||||||||||||| | || |||||| | ||| | || |    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| ||||||||||||||||||||| | || || |||||||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaa 9313  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||| ||  ||| |||| ||||||||||| |||||| | || |||||||| ||||    
T  9314 gaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttg 9372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 82; Significance: 5e-38; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2214 - 2117
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgc 98  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2214 gattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaatgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 2e-37; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 24655 - 24871
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |||||| ||  || || || ||||||||||| ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaa 24854  T
Q  292 ggaagtgagtttccttg 308  Q
     || || ||||| ||||    
T  24855 agaggtaagttttcttg 24871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 181937 - 181892
Alignment:
Q  263 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  181937 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 181892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 150675 - 150557
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    ||||| |||||| | ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||    
T  150675 gatgacattttgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgt 150576  T
Q  270 ctaagtgtgaattttggtt 288  Q
    | ||||||||||| |||||    
T  150575 caaagtgtgaattctggtt 150557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 80; Significance: 8e-37; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 80; E-Value: 8e-37
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 25024 - 25115
Alignment:
Q  217 tttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  25024 tttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttggttgaaggaagtgagtttccttg 25115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 74; Significance: 3e-33; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 59 - 308
Target Start/End: Complemental strand, 5328 - 5080
Alignment:
Q  59 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtgg 158  Q
    ||||| ||||| |||||||| || || ||  | |||||||||||||| || ||| ||||||||||| | || |||||| | ||| |||| || |||||||    
T  5328 tatgaatattcagtgatgcctttcggtgttacgaatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtgg 5230  T
Q  159 tggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatg 258  Q
    | |||||||| || ||||||||| | || || ||| |||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  ||||||     
T  5229 ttgtgttcattgacgatattttgatatactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttata 5130  T
Q  259 tgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    || ||||||||| |||||||| || |||||||| || |||||||| ||||    
T  5129 tgcaaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttg 5080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 73; Significance: 1e-32; HSPs: 2)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 65 - 305
Target Start/End: Complemental strand, 3110 - 2870
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 164  Q
    ||||| |||||||| || || ||  ||||||| || ||||| |||||||| ||||||||| | || |||||| ||||| |||| ||||| ||||| ||||    
T  3110 tattcagtgatgcctttcggtgttactaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgt 3011  T
Q  165 tcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaa 264  Q
    |||| |||||||||||| | || || |||||||| ||||| |||||||| ||||||| |||| | ||||||||  ||||||||||  |||||| ||   |    
T  3010 tcatcgatgatattttgatataatctaagtctgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctca 2911  T
Q  265 gttgtctaagtgtgaattttggttgaaggaagtgagtttcc 305  Q
     ||||| ||||||||||| |||||||| || ||||||||||    
T  2910 attgtcaaagtgtgaattctggttgaatgaggtgagtttcc 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #2
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 7859 - 7989
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||    
T  7859 gatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 7958  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    |||||| |||||| |||||||| | ||||||    
T  7959 ctaagtatgaattctggttgaaaggagtgag 7989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 69; Significance: 3e-30; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 6014 - 6210
Alignment:
Q  95 gcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagt 194  Q
    ||||||||||| |||||||||||||||||| | || || ||| | ||||| || ||||| ||||| |||||||| || ||||||||| | || || |||     
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||| ||||| ||||||||||| |||| |||||| ||||||||  ||||||||||  |||||| ||  |||||||| ||||||||||| ||||||||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaa 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 69; Significance: 3e-30; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 96 - 308
Target Start/End: Complemental strand, 4094 - 3882
Alignment:
Q  96 cgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtc 195  Q
    |||||||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || || ||| |    
T  4094 cgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagac 3995  T
Q  196 tgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaa 295  Q
    ||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  || ||| ||  || ||||| ||||||||||| |||||||| ||     
T  3994 tgaagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagag 3895  T
Q  296 gtgagtttccttg 308  Q
    |||||||| ||||    
T  3894 gtgagttttcttg 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 40453 - 40606
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 40606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 3e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 92 - 308
Target Start/End: Complemental strand, 495202 - 494986
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| ||||| |||||||||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||| | || ||||    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||||||| ||||| ||||||||| |||||| |||||| ||||||||  ||||||||||  || ||| ||  || ||||| |||| ||| || ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaa 495003  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  495002 tgaggtgagttttcttg 494986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 249
Target Start/End: Original strand, 453293 - 453492
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||||||||| |||   |||||||| || || ||  |||||||||| ||||| |||||||| || |||||  |||| || ||| | ||||||||      
T  453293 tatggacactatgaatataaagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggaatatatgaaccgaattttccatgcctatctggata 453392  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
      |||||||| ||||| || ||||| || ||| | |||| |||| |||| ||||||||||| || ||| ||| |||||| || ||||| |||||||||||    
T  453393 aatttgtggttgtgtttattgatgacatcttgatttatttgaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagagaa 453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 68; Significance: 1e-29; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 2323 - 2232
Alignment:
Q  217 tttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  2323 tttgaggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagttttcttg 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 66; Significance: 2e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 92 - 301
Target Start/End: Complemental strand, 17061 - 16852
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | ||| | || || || ||||| |||||||| || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |||||| ||  || ||||| |||||| |||| || |||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgccaaattgtcaaagtgtcaattctgattgaa 16862  T
Q  292 ggaagtgagt 301  Q
     || ||||||    
T  16861 agaggtgagt 16852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 3e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 115172 - 115319
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| |||||| ||||||||  |||| |||||  |||||| ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||||| |||||||||||||||||||| || |||||||| ||||    
T  115272 ccaagttgtcaaagtgtgaattttggttgaaagaggtgagttttcttg 115319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 63; Significance: 1e-26; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 147 - 405
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || ||||| || ||||||||||||||| | || |||||| | | | |||| |    
T  147 tatggacattatgagtataacgtgatgccgttcggtgttacaaatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatc 246  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||||||||||||||| || |||||||||||| |||||||||||    
T  247 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaa 346  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || | | ||  || ||||| ||||||||||| |||||||| || |||||||| ||||    
T  347 gaagctttatgctaaattgtcaaagtgtgaattctggttgaatgaggtgagttttcttg 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 63; Significance: 1e-26; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 121 - 339
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   | |||||||||||||| || ||| |||| |||||||||||||| |||||||||||  |||| | ||  || ||||| |||||||| || |||||     
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 320  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||| ||||||||||    
T  321 agtgaagtaagtttccttg 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 1e-26; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 5209 - 5407
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  |||| | ||  |||||||| || ||||||||||||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtt 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 63; Significance: 1e-26; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 1969 - 2187
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||||||||||||||| | || |||||| | ||| | || || ||  |||| |||||||| |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |||||| | ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  |||||  ||  |||||||| ||||||||||| ||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttg 2168  T
Q  290 aaggaagtgagtttccttg 308  Q
    || || |||||||| ||||    
T  2169 aatgaggtgagttttcttg 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 1e-26; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 10821 - 11079
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||||||| ||||| | || |||||| | ||| | || |    
T  10821 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 10920  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  10921 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 11020  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || | | ||  |||||||| ||||||||| | |||||||| ||||| ||||| ||||    
T  11021 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttg 11079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 17013 - 17271
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||||||| ||||| | || |||||| | ||| | || |    
T  17013 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 17112  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  17113 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 17212  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || | | ||  |||||||| ||||||||| | |||||||| ||||| ||||| ||||    
T  17213 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttg 17271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 54 - 303
Target Start/End: Original strand, 24382 - 24631
Alignment:
Q  54 gacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttt 153  Q
    |||||||| | ||||| |||||||| || || ||  | || |||||| |||| |||||||||||||||||| | || |||||| | ||||| || |||||    
T  24382 gacactataaatattcagtgatgcctttcggtgttacaaacgcgccaagtgtgtttatggagtacatgaatcgcatttttcatgcgtatctagatcgttt 24481  T
Q  154 tgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccag 253  Q
     ||||| |||||||| || || |||||| | || || ||| |||| ||||| | || || |||||||| |||||| ||||||||  ||||||||||  ||    
T  24482 cgtggttgtgttcatcgacgacattttgatatactctaagactgaagaagaacttgttgcgcatttgaagattgttttgcaagtgctgaaagagaagaag 24581  T
Q  254 ttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| ||  |||||||| || |||||||| |||||||| || ||||||||    
T  24582 ttatatgctaagttgtcaaaatgtgaattctggttgaatgaggtgagttt 24631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 61; Significance: 2e-25; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 15343 - 15559
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||| |||||||||||||||||||| | || |||||| | | | |||| ||||| ||| | |||||||| || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| ||||| || ||||||||||||| |||||| ||||||||  | ||||||||  |||||| ||  || ||||| ||||||||||| | ||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaa 15542  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  15543 agaggtgagttttcttg 15559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 61; Significance: 2e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 14643 - 14495
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||| ||||||||| |||| |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || |||||||| || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 61; Significance: 2e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 14601 - 14817
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | ||||  |||| ||||| |||||||| || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||  ||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  |||||| ||  || ||||| ||||||||||| | ||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaa 14800  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  14801 agaggtgagttttcttg 14817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 7e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 50 - 249
Target Start/End: Complemental strand, 103459 - 103260
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    ||||||||||||||||||   |||||||| || || ||  | |||||||||||||| |||||||||| ||||||| | || |||||| | | | |||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| || ||||| |||||||||||| | || || |||||||||||||| ||||| || ||||||| || ||| ||||||||  ||||||||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaa 103260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 59; Significance: 3e-24; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  16 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 59; Significance: 3e-24; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 50 - 308
Target Start/End: Original strand, 16058 - 16315
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| ||||||||||| |||||||| || || ||  | || ||||||||||| |||||| ||||||||||| | || |||||| | ||||| || |    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| |||||  | ||||| |||||||||||| | || || ||| |||| || ||  ||||||||||||||| |||| | |||||||| || || |||||    
T  16158 gtttcgtggttatattcatcgatgatattttgatatactctaagactgaagaggaatatgctgagcatttgaagatt-ttttgcaagtgttcaaggagaa 16256  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      |||||| ||  |||||||| ||||||||||| |||||||| || || ||||| ||||    
T  16257 gaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtaagttttcttg 16315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 59; Significance: 3e-24; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 48634 - 48852
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
    ||   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||| | ||  || ||||| ||||| || ||||||||     
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 48833  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  48834 agtgaagtgagttttcttg 48852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 45266 - 45119
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  45266 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatg 45167  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| || |||||||| ||||    
T  45166 ccaaattgtctaagtgtgaattctggttgaaagaggtgagttttcttg 45119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 17048 - 16904
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  |    
T  17048 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 16949  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||  ||||||||||||||||    
T  16948 aattgtctaagtgtgagttctggttgagagaagtgagtttccttg 16904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 10586 - 10442
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| | | |||||| |||||||| |||||||||||  |  | | ||  |    
T  10586 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 10487  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||  ||||||||||||||||    
T  10486 aattgtctaagtgtgagttctggttgagagaagtgagtttccttg 10442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 3e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 176464 - 176662
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||| |||| || ||||| || || || || ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||||||| ||||||||||| |||||||| | |||||||||| |||| ||||| || ||  |||| | ||  |||||||| || |||||||| |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaatgaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 58; Significance: 1e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 38085 - 38278
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || |  |||||||| ||||| |    
T  38085 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactacaagtctgaagaagaac 38184  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||| ||||||||    
T  38185 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgag 38278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 58; Significance: 1e-23; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 155 - 308
Target Start/End: Original strand, 11424 - 11577
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 254  Q
    ||||||||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  | |    
T  11424 gtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaat 11523  T
Q  255 tatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | | ||  || ||||||||||||||||| |||||||||||||| ||||| ||||    
T  11524 tttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttg 11577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 298
Target Start/End: Complemental strand, 50259 - 50068
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | |||| || || ||||| || ||||  |||||||||||| | || || |||||||| ||||| |    
T  50259 tttatggagtacatgaatcacatctttcatgcatttttggatcggttcgtggttgttttcaatgatgatattttgatttactccaagtctgaagaagaac 50160  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtg 298  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||| |||||||||||||| ||||||    
T  50159 atgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattttggttgaaagaagtg 50068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 53804 - 53662
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | |||| || || ||||| || ||||  |||||||||||| | || || |||||||| ||||| |    
T  53804 tttatggagtacatgaatcacatctttcatgcatttttggatcggttcgtggttgttttcaatgatgatattttgatttactccaagtctgaagaagaac 53705  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||||||| | | || |||||||| |||||||||||    
T  53704 atgctgagcatttgaagctggttttgcaagtgttgaaagagaa 53662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 58; Significance: 1e-23; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 59 - 308
Target Start/End: Original strand, 27337 - 27585
Alignment:
Q  59 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtgg 158  Q
    ||||| |||||||||||||| || || ||  |||||||||| || || ||| |||| || |||||| | || |||||| ||||||| || |||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  159 tggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatg 258  Q
    | ||||| || ||||||||  || | || || ||||||||||| || ||||| ||||||||||| ||||| ||||||||  ||||||||||  ||||||     
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttata 27536  T
Q  259 tgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||  ||||| || ||||| ||||| |||||||| | ||||||||| ||||    
T  27537 tgccaagttatcaaagtgagaattctggttgaacg-agtgagttttcttg 27585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 76571 - 76482
Alignment:
Q  128 atatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcat 217  Q
    ||||| ||||||||||||||||  ||| |||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||||| |||||||    
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagcat 76482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 1e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 201548 - 201741
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| || || ||||| |||||||| || || ||  ||||  |||| ||||| ||||||||||||||||||||||| || ||| ||||| |||| |    
T  201548 tatggacattacgaatattcagtgatgcctttcggtgttactaacacgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 201647  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
    | |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| ||||| || ||||||| | ||||||||||||| |||||    
T  201648 ggtttgtggttgtgtttattgatgatattttgatatactctaagactgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaa 201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 57; Significance: 5e-23; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 57; E-Value: 5e-23
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 7209 - 7425
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| || ||||| |||||||||||||||||| |||| |||||| | | | |||| |||||  |||| || ||||| ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    || |||| ||||| |||||||||||||||| || ||| |||||||| |||||||||||  |  | | ||  || ||||| ||||||||||| ||||||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaa 7408  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  7409 tgaggtgagttttcttg 7425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 54; Significance: 3e-21; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 3601 - 3400
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || || ||||| ||||| |    
T  3601 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaac 3502  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||||||| | | || |||||| | |||||||||||  |  | | ||  || || |||||||||||||| |||||||| ||||||||||| ||    
T  3501 atgctgagcatttgaagctggttttgcaattgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttct 3402  T
Q  307 tg 308  Q
    ||    
T  3401 tg 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 54; Significance: 3e-21; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 50 - 303
Target Start/End: Complemental strand, 3807 - 3554
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||||||||| |||   |||||||| || || ||  | ||||| || | ||| |||||||||||| ||||| | || |||||| | | | |||| |    
T  3807 tatggacactatgaatataaagtgatgcctttcggtgttacaaatgcacctgctgtgtttatggagtacgtgaatcgcatttttcatgcatttttggatc 3708  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||||||||||||||| || ||| ||| |||| |||||||||||    
T  3707 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgttttggaagtgttgaaagagaa 3608  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
      |||| | ||  || ||||| ||||||||||| |||||||| || ||||||||    
T  3607 aaagttttatgctaaattgtcaaagtgtgaattatggttgaaagaggtgagttt 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 3e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 84656 - 84857
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||| || |||||| | || |||||| ||||||| || |||||||| || ||||| || ||||||||| || | || || ||| |  |||| ||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||||  |||||| ||  ||||| || ||||| ||||| ||||||||  |||||||||||||    
T  84756 atgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtttcct 84855  T
Q  307 tg 308  Q
    ||    
T  84856 tg 84857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 92 - 288
Target Start/End: Complemental strand, 11012 - 10816
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||| ||||| ||||||||||||||||||||||| || ||| ||||| |||| |  ||||| || ||||| || ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
    || |||| ||||||||| | |||||||| | |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| |||||    
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 10816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 9107 - 8911
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  9107 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 9008  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| |||||||| |||||||||||    
T  9007 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 1e-20; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 2636 - 2784
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || ||||||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  201 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| |||||||||||||||| || |   |||||||| |||||||||||    
T  2736 aagaacatgctgagcatttgaagactagtttgcaagtgttgaaagagaa 2784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 151279 - 151086
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || ||| |||||||  | || || |||||||| ||||| |    
T  151279 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgataatattttaatttactccaagtctgaagaagaac 151180  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | ||||||||||| |||||||||||  || | | ||  || ||||||||||| ||||| |||||||| ||||||||    
T  151179 atgctgagcatttgaagctggtgttgcaagtgttgaaagagaataagctttatgcgaaattgtctaagtgcgaattctggttgaaagaagtgag 151086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 54210 - 54280
Alignment:
Q  238 cttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||| ||||| ||||| ||||  ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttg 54280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 51; Significance: 2e-19; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 42 - 308
Target Start/End: Original strand, 881 - 1147
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    ||||| ||||||| |||||||| |||   |||||||| || || ||  | ||||| || || || |||||||||||||||||| | || |||||| | |     
T  881 gaacgcggtatggtcactatgaatataaagtgatgcctttcggtgttacaaatgcacctggagtgtttatggagtacatgaatcgcatctttcatgcatt 980  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 241  Q
    | |||| |  |||||||| || ||||| |||| ||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||    
T  981 tttggatcagtttgtggttgttttcatagatggtattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttg 1080  T
Q  242 aaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||||||  || | | ||  || || |||||||||||||| |||||||| || |||||||| ||||    
T  1081 aaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttg 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 2e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 94 - 308
Target Start/End: Complemental strand, 22887 - 22673
Alignment:
Q  94 tgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaag 193  Q
    |||||||||||| |||||||||||||||||| | || |||||| | ||| |||| |  || ||||| ||||||||  ||||||||||| | || || |||    
T  22887 tgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaag 22788  T
Q  194 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagg 293  Q
    ||||| ||||| ||  |||||||||||| |||||| ||||||||   ||| || ||  |||||| ||  |||||||| |||||||| || |||||||| |    
T  22787 tctgaagaagaacacactgagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatg 22688  T
Q  294 aagtgagtttccttg 308  Q
    | || ||||| ||||    
T  22687 aggtaagttttcttg 22673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 38014 - 38099
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  38014 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 38099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 50; Significance: 7e-19; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 6055 - 5898
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||| ||||||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || ||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| || ||||| |||||||||||||||| |||||| || ||||| |||||||||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 13185 - 13028
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||| ||||||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || ||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| || ||||| |||||||||||||||| |||||| || ||||| |||||||||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 49; Significance: 3e-18; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 90 - 290
Target Start/End: Complemental strand, 11979 - 11779
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| |||||| | ||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  11979 ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 11880  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |||  ||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| ||||||    
T  11879 taagaatgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttg 11780  T
Q  290 a 290  Q
    |    
T  11779 a 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 92 - 300
Target Start/End: Complemental strand, 16825 - 16617
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| ||||| || |||||||||||||||||| | || |||||| |   | |||| || || |||||||| || || |||||||||||| | || || |    
T  16825 aatgcaccaggagtatttatggagtacatgaatcgcatctttcatgcacttttggatcggttcgtggtggtttttatcgatgatattttgatttactcca 16726  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    ||||||| ||||| |||||||||||||||| | | || ||| |||| |||||||||||  || | | ||  || |||||||| || ||||| ||||||||    
T  16725 agtctgaagaagaacatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaattgcgaattctggttgaa 16626  T
Q  292 ggaagtgag 300  Q
     ||||||||    
T  16625 agaagtgag 16617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 3e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 92 - 308
Target Start/End: Original strand, 217542 - 217758
Alignment:
Q  92 aatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcga 191  Q
    ||||| |||||||| ||||||||||||||||||   || |||||| | | | | || ||||| ||||| ||| |||| |||||||||||| | || ||||    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  192 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaa 291  Q
    |||  || ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  || ||| ||  || ||||| |||||||| || | ||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaa 217741  T
Q  292 ggaagtgagtttccttg 308  Q
     || |||||||| ||||    
T  217742 tgaggtgagttttcttg 217758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 48; Significance: 1e-17; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 916 - 1106
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || ||||||   ||||| |    
T  916 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactccaagtct---gaagaac 1012  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||||||||| |||||||  ||||||||    
T  1013 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgagagaagtgag 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 48; Significance: 1e-17; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 107 - 298
Target Start/End: Original strand, 6468 - 6659
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  6468 tttatggagtacatgaatcgcatctttcatgcgtttttggatcggttcgtggttgtttttatcgatgatattttgatttactccaagtctgaagaagaac 6567  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtg 298  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||||||||| ||||| |||||||| ||||||    
T  6568 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttgaaagaagtg 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 1e-17; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 114745 - 114586
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
     |   |||||||||||||||| || ||| ||| |||||| |||||||| |||||||||||    
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaa 114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 308
Target Start/End: Original strand, 108002 - 108149
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    |||||||| |||||||||||| | || || |||  ||| || || |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  108002 gtgttcatcgatgatattttgatttactccaagattgaagaggaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 108101  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| || || ||||| ||||    
T  108102 ccaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttg 108149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 2055 - 1857
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||||||  |||| ||||||||||| ||||| ||||| || ||| ||||||||||     ||||||| ||||| || ||||| || ||  | |||||    
T  2055 ctaatgcgcctagtgtgtttatggagtatatgaacagaattttccatgcttatctggataaaattgtggttgtgtttattgatgacatcttaatttattc 1956  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || ||||||||||||||    
T  1955 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaataagttgtatgccaagttgtccaaatgtgaattttggtt 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 42 - 300
Target Start/End: Complemental strand, 1000 - 742
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    ||||| ||||||| || |||||||||   |||||||| || || ||  | |||||||| || || |||||||||||||||||| | || |||||| | |     
T  1000 gaacgcggtatggccattatgagtataaggtgatgccgttcggtgttacaaatgcgcctggagtatttatggagtacatgaatcgcatctttcatgcatt 901  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 241  Q
    | |||| || || ||||| || || || |||||||||||| | || |  |||||||| ||||| |||||||||||||||| | | || |||||||| |||    
T  900 tttggatcggttcgtggttgtttttatcgatgatattttgatttacttcaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttg 801  T
Q  242 aaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||  |  | | ||  || ||||||||| ||||||| |||||||| ||||||||    
T  800 aaagagaagaacctttatgcgaaattgtctaagggtgaattctggttgaaagaagtgag 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 47; Significance: 4e-17; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 50 - 288
Target Start/End: Complemental strand, 41922 - 41685
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    ||||| |||||||| |||   |||||||| || |||||  |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||| ||||      
T  41922 tatggtcactatgaatataaggtgatgcctttcggagttactaatgcgcctggtgtgtttatggagtatatgaacagaattttgcatgcttatatggata 41823  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
      |||||||| ||||| || ||||| || ||  | ||||| |||  ||| ||||||||||| |||||| ||| ||||||||||||||| ||| |||| ||    
T  41822 aatttgtggttgtgtttattgatgacatcttaatttattctaagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttg-aagaaaa 41724  T
Q  250 ccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
      |||| | ||| ||| |||| ||||||||||| |||||    
T  41723 gaagttgtatgacaagctgtccaagtgtgaattctggtt 41685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 46706 - 46751
Alignment:
Q  263 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  46706 aagttgtctaagtgtgaattttggttgcgggaagtgagtttccttg 46751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 51527 - 51624
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| || ||||| ||||| |||||| | || || ||| |||| |||||  ||||||||||| ||| |||||| |||||||| |||||||||||    
T  51527 tttgtggttgttttcatcgatgacattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 51624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 195624 - 195766
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | |||||| ||||||||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  195624 tttatggagtatatgaatcgcatcttccatgcatttctggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaac 195723  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||| ||| | |||| |||||||| |||||||||||    
T  195724 atgctgagcatctgaaggttgtcttgcaagtgttgaaagagaa 195766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 1576 - 1721
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  |    
T  1576 ttcattgatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 1675  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttgt 309  Q
    | ||||||||||||||||| |||||||| |||||||| || |||||    
T  1676 aattgtctaagtgtgaattctggttgaaagaagtgagctttcttgt 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 8541 - 8348
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| || || || |||||||||||| | || || |||||| ||||||| |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccag--ttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    || |||||||||||| | | || |||||||| |||||||| ||  ||  ||||| ||||  ||||||||||| ||||| |||||||| ||||||||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaaagaaaagaagcattatgcgaaa--ttgtctaagtgcgaattctggttgaaagaagtgag 8348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 228 - 35
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||| | | || |||||| | | | |||| || || ||||| || ||||| |||||||||||| | || || |||||||| ||||| |    
T  228 tttatggagtacatgattcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaagaac 129  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || || |||||||||||||| ||||| || ||||||||    
T  128 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaattctggttaaaagaagtgag 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 22305 - 22518
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||| ||| ||||||||| | || | |||| ||||| | || ||  |||| || |||||||| |||||||||||| | || ||    
T  22305 ctaatgcaccgggtgtatttacggaatacatgaattgcatttctcatgcttatttagatcgcattgttgttgtgttcattgatgatattttgatatactc 22404  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |||||||| ||||| || ||  ||||||||| |||||| ||||||||  || |||||||   ||||| ||  |||||||| ||||||||||| ||||||    
T  22405 taagtctgaagaagaacacgccaagcatttgaagattgttttgcaagtgctgcaagagaaaacgttatatgccaagttgtcaaagtgtgaattctggttg 22504  T
Q  290 aaggaagtgagttt 303  Q
    || || ||||||||    
T  22505 aatgaggtgagttt 22518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 95 - 288
Target Start/End: Original strand, 64633 - 64826
Alignment:
Q  95 gcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagt 194  Q
    ||||| ||||| ||||||||||| |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | ||||| |||     
T  64633 gcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaaga 64732  T
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||| |||||| ||||  |||| | ||  |||||||| || |||||||| |||||    
T  64733 ctgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaaagaagaagttgtatgccaagttgtcaaaatgtgaattctggtt 64826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 45; Significance: 7e-16; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 49290 - 49134
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| | ||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  49290 ctaatgcgcctggtgtgtttatggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 49191  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| ||||||||    
T  49190 taagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaaga 49134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 7e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 50996 - 50840
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||| | ||||||||    ||| |||| ||||| || ||||| || ||  | |||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggataaatttttggttgtgtttattgatgacatcttaatttattc 50897  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     | | |||| ||||||||||| |||||| ||| |||||| |||||||| ||||||||    
T  50896 tatgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaaga 50840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 44; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 31501 - 31652
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||||||||| || ||||||||| || | ||||| ||| |||| || |||||||| |||||| ||| |||| | ||||||||||||||||| ||      
T  31501 tttgtggtggtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaaga 31600  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| | || |||| |||| |||||||| || ||||| |  |||||||||||    
T  31601 agttgtatgcaaagctgtcaaagtgtgagttctggttaagtgaagtgagttt 31652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 212 - 142
Alignment:
Q  238 cttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||| ||||| ||||| ||||  ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttg 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 5487 - 5629
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||| ||| |||| |||||||    
T  5487 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 5586  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| || ||| ||| ||||||||||||||| |||||||||||    
T  5587 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 9918 - 10060
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||| ||| |||| |||||||    
T  9918 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 10017  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| || ||| ||| ||||||||||||||| |||||||||||    
T  10018 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 8928 - 9126
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| |||||| ||||||||||   ||| || ||| ||||||||||    |||||||| ||||| || |||||||| ||  | |||||    
T  8928 ctaatgcgcctggtgtgtttatgaagtacatgaacttaattttccatgcttatctggataaatttgtggtcgtgtttattgatgatatctttatttattc 9027  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| |||||||| ||  |||| | ||  |||||||| || |||||||| |||||    
T  9028 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 43; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 2902 - 2704
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  2902 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 2803  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||| | ||  ||||||||||| ||||| || |||||    
T  2802 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtctaaatgtgagttctggtt 2704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 35572 - 35523
Alignment:
Q  200 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  35572 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 35523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 10979 - 11048
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| || |||||||||||||  |||||||||||||| |||||||||||||||| ||||| ||||||||    
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttggttgaagggagtgattttccttg 11048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 14833 - 14986
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||| ||||| ||||| ||||||||||||||||||  ||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  14833 ctaacgcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 14932  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 243  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| |||||    
T  14933 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 14986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 9478 - 9334
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  |    
T  9478 ttcatcgatgatatttttatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 9379  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    | |||||||||||||| || |||||||| ||||||||||| ||||    
T  9378 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttg 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 246
Target Start/End: Complemental strand, 28751 - 28555
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggacc 149  Q
    |||||||| |||||||||   |||||||| || || ||  |||||||||| ||||| ||||||||||| ||||| ||||| || ||| | ||||||||      
T  28751 tatggacattatgagtataaggtgatgcctttcggtgttactaatgcgcctggtgtatttatggagtatatgaacagaattttccatgcctatctggata 28652  T
Q  150 gttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
      |||||||| ||||| || ||||||||  |  | ||||| | |  ||| ||| ||||||| |||||| ||| ||||||||||||||| ||||||||    
T  28651 aatttgtggttgtgtttattgatgatatcctaatttattctaggaatgaagaaaagcatgcagagcatctgatgattgtgttgcaagtgttgaaaga 28555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 49995 - 50151
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  49995 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 50094  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||| ||||| ||||||||    
T  50095 taagactgaagaagagcatgcagagcatctgaagattgtgtttcaagtgttgaaaga 50151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 40; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 246
Target Start/End: Complemental strand, 1179 - 1024
Alignment:
Q  91 taatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcg 190  Q
    ||||| ||| ||||| ||||||||||| ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||     
T  1179 taatgtgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattca 1080  T
Q  191 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 246  Q
    ||| |||| ||||||||||| || ||| |||  ||||| |||||||| ||||||||    
T  1079 aagactgaagaagagcatgcagaacatctgaatattgtattgcaagtattgaaaga 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 13456 - 13615
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  13456 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 13555  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| | || ||||||||||| || ||| ||| |||||| |||||||| |||||||||||    
T  13556 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaa 13615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 21635 - 21794
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  21635 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 21734  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||| | || ||||||||||| || ||| ||| |||||| |||||||| |||||||||||    
T  21735 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaa 21794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 308
Target Start/End: Complemental strand, 40268 - 40121
Alignment:
Q  161 gtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtg 260  Q
    ||||| || ||||| |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  40268 gtgtttatcgatgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 40169  T
Q  261 aaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
      || ||||||||||||||||| |||||||| ||||| ||||| ||||    
T  40168 ctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttg 40121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 40; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 53169 - 53018
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| || || || ||||||||| || | ||||| ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||      
T  53169 tttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaa 53070  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagttt 303  Q
    |||| | ||  |||||||| |||||||| || ||||| |  |||||||||||    
T  53069 agttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 53018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 4362 - 4164
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||| | || ||| | ||||     
T  4362 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatcacatcttgatttatta 4263  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| |||||||||||  | ||| ||| |||||| |||||||| |||||||||||  |||| | ||  |||||||| || ||||||||||||||    
T  4262 taagactgaagaagagcatgcataacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgaattttggtt 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 1605 - 1823
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| || ||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  1605 ctaatgcgcctggtgtgtttatggagtatataaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 1704  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     ||| |||| ||||||||||| ||  || ||| |||||| |||||||| |||||||||||  |||| | ||  |||||||| || ||||| || |||||     
T  1705 taagactgaagaagagcatgcagaagatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggtta 1804  T
Q  290 aaggaagtgagtttccttg 308  Q
    || ||||| ||||| ||||    
T  1805 aatgaagttagttttcttg 1823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 300
Target Start/End: Complemental strand, 20472 - 20214
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    ||||| |||||||||| |||||||||   |||||||| || || ||  | ||||| ||  | || ||||||||||||||||||   || |||||| | |     
T  20472 gaacgcggtatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctagagtgtttatggagtacatgaatcatatctttcatgcatt 20373  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 241  Q
    | |||| || || ||||| || || || |||||||||||| | || || ||| |||| ||||| |||||||||||||||| | | || |||||||| |||    
T  20372 tttggatcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaagttggttttgcaagtgttg 20273  T
Q  242 aaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||||  |  | | ||  || ||||||||||||||||| |||||||| ||| ||||    
T  20272 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaattgag 20214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 24400 - 24202
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| || || ||||||||||| |||||  |||| || ||| ||| ||||||    |||||||| ||||| || ||||||||| || | |||||    
T  24400 ctaatgcgcctggggtgtttatggagtatatgaaccgaattttccatgcttctctggataaatttgtggttgtgtttattgatgatattctgatttattc 24301  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| || |||||||| || ||| ||| ||||||||||||||| || ||||| ||  |||| | ||  |||||||| |||||||| || |||||    
T  24300 taagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggtt 24202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 44537 - 44735
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| ||||||||||| ||||| | ||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  44537 ctaatgcgcctggtgtgtttatggagtatatgaaaaaaattttccatgcatatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 44636  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| || | ||||||||| |  | ||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| || ||||||||||||||    
T  44637 taagactaaagaagagcatacaaaacatctgaagattgtattgcaagtattgaaagaaaataagttgtatgccaagttgtcaaaatgtgaattttggtt 44735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 21035 - 20817
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  21035 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 20936  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |    ||||||||||||||| || ||| |||||| ||| |||||||| || | ||||||  |||| | ||  || ||||| |||||||| || |||||     
T  20935 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 20836  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  20835 agtgaagtgagttttcttg 20817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 308
Target Start/End: Complemental strand, 25197 - 24979
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  25197 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 25098  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |    ||||||||||||||| || ||| |||||| ||| |||||||| || | ||||||  |||| | ||  || ||||| |||||||| || |||||     
T  25097 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 24998  T
Q  290 aaggaagtgagtttccttg 308  Q
    |  ||||||||||| ||||    
T  24997 agtgaagtgagttttcttg 24979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 38; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 13093 - 13162
Alignment:
Q  239 ttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    ||||| ||||| ||||| ||||  ||||||||||||||||| |||||||||  |||||||||||||||||    
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttg 13162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 7390 - 7189
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | | || || || ||||| || || || |||||||||||| | || || ||| | |||||||| |    
T  7390 tttatggagtacatgaatcgtatctttcatgcatttttagatcggttcgtggttgtttttattgatgatattttgatttactccaagaccgaggaagaac 7291  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||  || ||||||||||||||||| ||||| || ||||||||||| ||    
T  7290 atgttgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttaaaagaagtgagttttct 7191  T
Q  307 tg 308  Q
    ||    
T  7190 tg 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 303
Target Start/End: Original strand, 99682 - 99895
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||| |||| || ||| | ||||||||    |||||||| ||||| || ||||| ||| || | |||||    
T  99682 ctaatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattc 99781  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttg 289  Q
     |   |||| ||||||||||| || ||| ||| ||||||||||||| |  | ||||||||  |||||| ||  |||||||| |||||||| || |||||     
T  99782 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggtta 99881  T
Q  290 aaggaagtgagttt 303  Q
    |  |||||||||||    
T  99882 agtgaagtgagttt 99895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 308
Target Start/End: Complemental strand, 6874 - 6718
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || ||||| || ||| | ||||| ||| |||||||||||||||  || ||| ||| |||||| |||||||| |||||||||||      
T  6874 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaggaagagcatgtagaacatctgaagattgtattgcaagtattgaaagagaaga 6775  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||| | ||  |||||||| || ||||| || ||||| |  ||||||||||| ||||    
T  6774 agttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtgagttttcttg 6718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 8161 - 8025
Alignment:
Q  164 ttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaa 263  Q
    ||||| |||||||||||| | || || |||| |||||||||  ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  |    
T  8161 ttcattgatgatattttgatttactccaagtttgaggaagaatatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 8062  T
Q  264 agttgtctaagtgtgaattttggttgaaggaagtgag 300  Q
    | ||||||||||| ||||| |||||||| ||||||||    
T  8061 aattgtctaagtgcgaattctggttgaaagaagtgag 8025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 288
Target Start/End: Complemental strand, 43041 - 42905
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 251  Q
    |||||||| ||||| || ||||||||| || | ||||| ||| |||| ||||||||||| || ||| |||  |||||||||||| | |||||||||||      
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaaga 42942  T
Q  252 agttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
    |||| | ||  |||||||| |||||||| || |||||    
T  42941 agttgtatgctaagttgtcgaagtgtgagttctggtt 42905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13656 - 13707
Alignment:
Q  1 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtat 52  Q
    ||||| ||| |||||  |||||||||||||||||||||||||||||||||||    
T  13656 gattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 308
Target Start/End: Complemental strand, 1208 - 965
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 164  Q
    ||||| |||||||| || || ||  |||| ||||| || || |||||||| || |||||| | || |||||| ||||| |||| |  ||||| || ||||    
T  1208 tattcggtgatgcctttcggtgttactaacgcgccgggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgt 1109  T
Q  165 tcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaa 264  Q
    | || ||||||||| || | || || ||| | || || || ||||| ||||||||||| ||||| ||||||||  |||| |||||  |||||| ||  ||    
T  1108 ttatagatgatattatgatatactctaagaccgaagaggaacatgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaa 1009  T
Q  265 gttgtctaagtgtgaattttggttgaaggaagtgagtttccttg 308  Q
     || || ||||||||||| |||||||| ||||||| ||| ||||    
T  1008 attatcgaagtgtgaattctggttgaacgaagtgacttttcttg 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 36260 - 36065
Alignment:
Q  42 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatcctta 141  Q
    ||||| ||||||| ||||||||||||   || ||||| || || ||  | ||||| || || || ||||||||||||||||||   || |||||| | |     
T  36260 gaacgcggtatggtcactatgagtataaagttatgcctttcggtgttacgaatgcacctggagtatttatggagtacatgaatcacatctttcatgcatt 36161  T
Q  142 tctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 237  Q
    | |||| || |||||||| || ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| ||||||||    
T  36160 tttggatcgatttgtggttgttttcattgatgatattttaatttactctaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagt 36065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 20771 - 20641
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | |||| || |||||||| || ||||| |||||||||||  | || || ||| |||| ||||| |    
T  20771 tttatggagtacatgaatcacatctttcatgcatttttggatcgatttgtggttgttttcattgatgatattttaatttactctaagactgaagaagaac 20672  T
Q  207 atgctgagcatttgaggattgtgttgcaagt 237  Q
    ||||||||||| ||| |||||| ||||||||    
T  20671 atgctgagcatctgaagattgtcttgcaagt 20641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 16261 - 16126
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtcta 272  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||  || |||||||    
T  16261 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatgctaacttgtcta 16162  T
Q  273 agtgtgaattttggttgaaggaagtgagtttccttg 308  Q
    |||||||||| |||||||| ||| | ||||| ||||    
T  16161 agtgtgaattctggttgaaagaattaagttttcttg 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 2542 - 2448
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  2542 gtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 3168 - 3271
Alignment:
Q  185 tattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaatttt 284  Q
    ||||| ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||||||  |||| | ||  |||||||| |||||||| || |    
T  3168 tattcaaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 3267  T
Q  285 ggtt 288  Q
    ||||    
T  3268 ggtt 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 2392 - 2590
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  2392 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 2491  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||||||||| |||||| ||| |||| |||||||||| || ||||| |   |||| | ||  ||||||||||| |||||||| |||||    
T  2492 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtt 2590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 13411 - 13541
Alignment:
Q  170 gatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgt 269  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||    
T  13411 gatgatattttgatttactccaagtctgaagaagaacatgatgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 13510  T
Q  270 ctaagtgtgaattttggttgaaggaagtgag 300  Q
    ||||||| ||||| ||||| || ||||||||    
T  13511 ctaagtgcgaattctggttaaaagaagtgag 13541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 303
Target Start/End: Complemental strand, 9152 - 9034
Alignment:
Q  185 tattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaatttt 284  Q
    ||||| ||| |||| ||||||||||| || ||| ||| ||||||||| ||||| |||||||||||  |||| ||||  |||||||| |||||||| || |    
T  9152 tattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttct 9053  T
Q  285 ggttgaaggaagtgagttt 303  Q
     ||| |  |||||||||||    
T  9052 agttaagtgaagtgagttt 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 35; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 28600 - 28742
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | |||| ||||| ||||| || || || || ||||||||| | || || ||| |||| ||||| |    
T  28600 tttatggagtatatgaatcgcatcttccatgcatttttggatcgtttcgtggttgtttttatcgacgatattttgatttactccaagactgaagaagaac 28699  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||    
T  28700 atgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 28742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 28774 - 28850
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  28774 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 28850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 29405 - 29603
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    |||||||||| ||||| || |||||||| |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  29405 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 29504  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     |||  ||| ||||||||||| |||||| ||| |||| |||||||||| || ||||| |   |||| | ||  ||||||||||| |||||||| |||||    
T  29505 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtt 29603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 35; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 50365 - 50459
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||    
T  50365 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaa 50459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 59399 - 59493
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||    
T  59399 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaa 59493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 65787 - 65881
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||    
T  65787 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaa 65881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaa 123  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || ||||||||||| |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 308
Target Start/End: Original strand, 23299 - 23412
Alignment:
Q  195 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaagga 294  Q
    |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||  ||  |||||||||||||||| |||||||| ||    
T  23299 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaaga 23398  T
Q  295 agtgagtttccttg 308  Q
    ||||||||| ||||    
T  23399 agtgagttttcttg 23412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 25082 - 25283
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| ||||| |||||  | || || || ||||||||| | || || |||  ||||||||| |    
T  25082 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttctttttattgacgatattttgatttactccaagattgaggaagaac 25181  T
Q  207 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtttcct 306  Q
    ||||||||||||||| | | || |||||||| |||||||| ||  |  | | ||  || || |||||||||||||| |||||||| ||| ||||||| ||    
T  25182 atgctgagcatttgaagctggttttgcaagtgttgaaagataagaaactttatgctaaattatctaagtgtgaattctggttgaaagaattgagttttct 25281  T
Q  307 tg 308  Q
    ||    
T  25282 tg 25283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 25234 - 25141
Alignment:
Q  155 gtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagaga 248  Q
    |||||||| || || |||||||||||| | ||||| ||| |||| || |||||||| ||||| |||| ||||||||||||  | ||||||||||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagaga 25141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 7896 - 7972
Alignment:
Q  173 gatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  7896 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 7972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 705 - 566
Alignment:
Q  71 gtgatgccatttggagtatctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatgg 170  Q
    ||||||||||| || ||  |||||||||| ||||| ||||||||||| ||||| ||||| || ||| ||||||| ||    |||||||| ||||| || |    
T  705 gtgatgccattcggtgttactaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctagataaatttgtggttgtgtttattg 606  T
Q  171 atgatattttggtgtattcgaagtctgaggaagagcatgc 210  Q
    |||| || ||  | ||||| ||| |||| |||||||||||    
T  605 atgacatcttaatttattctaagactgaagaagagcatgc 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 288
Target Start/End: Original strand, 10177 - 10375
Alignment:
Q  90 ctaatgcgccaggtgtctttatggagtacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattc 189  Q
    ||||||||||  |||| ||||||||||| |||||  |||| || ||| |||| || ||    || ||||| ||||| || ||||| || ||| | |||||    
T  10177 ctaatgcgcctagtgtgtttatggagtatatgaaccgaattttccatgcttacctagataaattcgtggttgtgtttattgatgacatcttgatttattc 10276  T
Q  190 gaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggtt 288  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||| | ||  |||||||| |||||||| || |||||    
T  10277 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgtcaagttgtcaaagtgtgagttctggtt 10375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 56062 - 56180
Alignment:
Q  185 tattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaatttt 284  Q
    ||||| ||| |||| || |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||| | ||  |||||||| || |||||||| |    
T  56062 tattccaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattct 56161  T
Q  285 ggttgaaggaagtgagttt 303  Q
    |||| |  |||||||||||    
T  56162 ggttaagtgaagtgagttt 56180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 4270 - 4221
Alignment:
Q  200 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  4270 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 4221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 12481 - 12578
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| || || || ||| ||||| || | ||||| ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||    
T  12481 tttgtggttgtatttattgataatattctgatctattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaattattgaaagagaa 12578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 33899 - 34020
Alignment:
Q  116 tacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagc 215  Q
    |||||||||| ||| || ||| ||||| ||||  | || ||||| || || || ||||| |||||| | ||||| | |||||| ||||||||||| ||||    
T  33899 tacatgaataaaattttccatgcttatttggattggttcgtggttgtatttattgatgacattttgatttattctaggtctgaagaagagcatgcagagc 33998  T
Q  216 atttgaggattgtgttgcaagt 237  Q
    |||| | |||| ||||||||||    
T  33999 atttaaagattatgttgcaagt 34020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 109754 - 109657
Alignment:
Q  152 tttgtggtggtgttcatggatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 249  Q
    |||||||| ||||| || ||||| ||  || | ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||    
T  109754 tttgtggttgtgtttattgatgacatcgtgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaa 109657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 262297 - 262192
Alignment:
Q  203 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtt 302  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||| | ||  |||||||| || |||||||| ||||| |  ||||||||||    
T  262297 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 262198  T
Q  303 tccttg 308  Q
    | ||||    
T  262197 ttcttg 262192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 195313 - 195208
Alignment:
Q  203 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgaaaagttgtctaagtgtgaattttggttgaaggaagtgagtt 302  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||| | ||  |||||||| || |||||||| ||||| |  ||||||||||    
T  195313 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 195214  T
Q  303 tccttg 308  Q
    | ||||    
T  195213 ttcttg 195208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University