View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9536_low_4 (Length: 251)
Name: NF9536_low_4
Description: NF9536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9536_low_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 8690379 - 8690629
Alignment:
| Q |
1 |
aattttatttgagatacatttctgaattgttcaacacatgtcttacgagtgtcatatgagtgttctagagatgtccatacttcacaggtcttggcaatta |
100 |
Q |
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| T |
8690379 |
aattttatttgagatacatttctgaattgttcaacacatgtcttacgagtgtcatatgagtgttctagagatgtccatacttcacaggtcttggcaatta |
8690478 |
T |
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| Q |
101 |
cgtgcagaagatataaatttaaaaatgaatcgattagttgtattatgttacattatatcatattatatatacttgaaaagtgatcaatcaactataaata |
200 |
Q |
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| T |
8690479 |
cgtgcagaagatataaatttaaaaatgaatcgattagttgtattatgttacattatatcatattatatatacttgaaaagtgatcaatcaactataaata |
8690578 |
T |
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| Q |
201 |
tggaccgtggtatttgctgattagcaacataggtggtattagaaagtctct |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8690579 |
tggaccgtggtatttgctgattagcaacataggtggtattagaaagtctct |
8690629 |
T |
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