View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9543_low_14 (Length: 238)
Name: NF9543_low_14
Description: NF9543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9543_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4058798 - 4059023
Alignment:
| Q |
1 |
atcaccatcgcataacaaatttgcaaaaattcacattaagaatatttcaaatattcaattaaaagtacatagcaatgattcatatatcatactatgtcaa |
100 |
Q |
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| T |
4058798 |
atcaccatcacataacaaatttgcaaaaattcacattaagaatatttcaaatattcaattaaaagtacatagaaatgattcatatatcatactatgtcaa |
4058897 |
T |
|
| Q |
101 |
tcatttcacttaagaagcaaacaacaaatatttcacttaagcacaatatagtcaagtatgaaag---ttatatgatatatcaacatgaaattcaatcaat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
4058898 |
tcatttcacttaagaagcaaacaacaaatatttcacttaagcacaatatagtcaagtatgaaagttattatatgatatatcaacatgaaattcaatcaat |
4058997 |
T |
|
| Q |
198 |
acataacacggcagttatgaccatat |
223 |
Q |
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|||||||||||||||||||||||||| |
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| T |
4058998 |
acataacacggcagttatgaccatat |
4059023 |
T |
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