View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9550_low_1 (Length: 295)
Name: NF9550_low_1
Description: NF9550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9550_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 41 - 287
Target Start/End: Original strand, 27670894 - 27671140
Alignment:
| Q |
41 |
aaaatttgattatgttatatctctatggacaccaatagtcttttttaatatcctcgtacaatttggagacaccataccacatgaaagtgactttcatgag |
140 |
Q |
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| T |
27670894 |
aaaagttgattatgttatgtctctatggacaccaatagtcttttttaatatcctcgtacaatttggagataccataccacatgaaagtgactttcatgag |
27670993 |
T |
|
| Q |
141 |
cttcatccaatattactctcctcaattcttctcactacgaatacaaatcctaccccagtaaagaataagtccatcaaggtctagtgaaattcaactgatt |
240 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
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| T |
27670994 |
cttcatccaatattactctcctcaattcttctcaccacgaatacaaatcctacccctgtaaagaataagtctatcaaggtctagtgaaattcaactgatt |
27671093 |
T |
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| Q |
241 |
cttcttcccttgcaacactcataaatttgagtcaatatagtattatc |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
27671094 |
cttcttcccttgcaacactcataaatttgagtcaatatagtcttatc |
27671140 |
T |
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