View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9551_1D_low_17 (Length: 267)
Name: NF9551_1D_low_17
Description: NF9551_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9551_1D_low_17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 39126228 - 39126499
Alignment:
| Q |
1 |
acagtaattatgaattttccatgtcaatttaaattaactttgagatctcaattttttaaccacttataaaaaacttttccgtgaacattgtaagtttaga |
100 |
Q |
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| T |
39126228 |
acagtaattatgaattttccatgtcaatttaaattaactttgagatctcaattttttaaccacttataaaaaacttttccgtgaacattgtaagtttaga |
39126327 |
T |
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| Q |
101 |
atgattttttacaaaccaataaatcataaatattattcaattgctcaaaatatattcaagacatttggcatgctgcattaatgatcaacggtagcaattt |
200 |
Q |
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| T |
39126328 |
atgattttttacaaaccaataaatcataaatattattcaattgctcaaaatatattcaagacatttggcatgctgcattaatgatcaacggtagcaattt |
39126427 |
T |
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| Q |
201 |
ctggacaatga-----ttaatcagcttatcactaataaattatcactgaatcagctaatggcctagttttga |
267 |
Q |
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| T |
39126428 |
ctggacaatgatgtacttaatcagcttatcactaatgaattatcactgaatcagctaatggcctagttttga |
39126499 |
T |
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