View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9551_1D_low_33 (Length: 236)
Name: NF9551_1D_low_33
Description: NF9551_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9551_1D_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 42138391 - 42138187
Alignment:
| Q |
15 |
tcagtgatgaggagtttgaagtcagaagttgatgcaggaaacatcaaaccatactgtttcgtggagatcaatggtctgaaattggcttcaccggagaata |
114 |
Q |
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| T |
42138391 |
tcagtgatgaggagtttgaagtcagaagttgatgcaggaaacatcaaaccatactgtttcgtggagatcaatggtctgaaattggcttcaccggagaata |
42138292 |
T |
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| Q |
115 |
tttacaaggtgaagttcacaaatgttttactgtttttggttttatgaccaaattccttggttgccttatggttccgacttccaatactattttaggtcat |
214 |
Q |
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| T |
42138291 |
tttacaaggtgaagttcacaaatcttttactgtttttggttttatgaccaaattccttggttgccttatggttccgacttccaatactattttaggtcat |
42138192 |
T |
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| Q |
215 |
atatg |
219 |
Q |
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||||| |
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| T |
42138191 |
atatg |
42138187 |
T |
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