View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9551_2D_low_14 (Length: 218)
Name: NF9551_2D_low_14
Description: NF9551_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9551_2D_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 1783952 - 1784130
Alignment:
| Q |
20 |
gctagaatcacaccagcagcaaacgctttaaccnnnnnnnnnnnntcatttttcggatttaaatatgaacannnnnnngcaaagattggaatgcatacac |
119 |
Q |
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| T |
1783952 |
gctagaatcacaccagcagcaaacgctttaaccaaaaaataaaaatcattttccggatttaaatatgaacatttttttgcaaagattggaatgcatacac |
1784051 |
T |
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| Q |
120 |
caattagactagaaacaaaaactgttgccatagcaattaatttgtatttcaatgcctcggatactttttgataagaatc |
198 |
Q |
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| T |
1784052 |
caattagactagaaacaaaaactgttgccatagcaattaatttatatttcaatgcctcagatactttatgataagaatc |
1784130 |
T |
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