View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9553_low_15 (Length: 212)
Name: NF9553_low_15
Description: NF9553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9553_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 46227657 - 46227819
Alignment:
| Q |
36 |
atttgaggcagtggggttagaaaactagtattaatttataagaataagaatatataattatttgatgatttgaatgttgatttatagcaagacatacaga |
135 |
Q |
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| T |
46227657 |
atttgaggcagtggggttagaaaactagtattaatttataagaataagaatatataattatttgatgatttgaatgttgatttatagcaagacatacaga |
46227756 |
T |
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| Q |
136 |
actggaaatgagggagggggaccattaattatcatcatcatcactcatatgcatgagaattat |
198 |
Q |
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| T |
46227757 |
actggaaatgagggagggggaccattaattatcatcatcatcactcatatgcatgagaattat |
46227819 |
T |
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