View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9553_low_4 (Length: 422)
Name: NF9553_low_4
Description: NF9553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9553_low_4 |
 | |
|
| [»] scaffold0425 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 16 - 407
Target Start/End: Complemental strand, 35141165 - 35140774
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141165 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
35141066 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatatttagtcttgaaaacaaactctgatgcacgttggtggatat |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141065 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatatttagtcttgaaaacaaactctgatgcacgttggtggatat |
35140966 |
T |
|
| Q |
216 |
cttaaagtatttctcaccaacacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140965 |
cttaaagtatttctcaccaacacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaat |
35140866 |
T |
|
| Q |
316 |
caaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgatgtc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35140865 |
caaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgatgtc |
35140774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 407
Target Start/End: Original strand, 6258436 - 6258829
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6258436 |
cagtaagagtgtatgcaaattatacaacatacaaatggaatcaggtaaacttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagttt |
6258535 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatattt-agtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
6258536 |
cttatctcatcagctagctctaagagattgcaaccagagaaagacaatatccgcaaatattttagtcttgaaaacaaactctgctgcacattggtggata |
6258635 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
|||||||| |||||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6258636 |
tcttaaagcgtttctcaccatatccttgttcttctaccatcagactctgtagtcctttaatgttatgaatctgctttagttttctatcaccatcttccaa |
6258735 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgatgtc |
407 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6258736 |
atcaaggcggcaccaaatgtgacgtgtcctttgagggatatcttgcactttcacaccctctattcgtaagcagaattctcctgacattgatgtc |
6258829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 407
Target Start/End: Original strand, 6244527 - 6244920
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6244527 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagttt |
6244626 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatatt-tagtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| | |||||| ||| |||| ||||||| || ||||||| ||||| | | ||||| |||||||||| |
|
|
| T |
6244627 |
cttatctcatcagctagctctgagagattgcaaccattgaaagataacttccgtaaatattgtactcttgaatacaaattatactgcacattggtggata |
6244726 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
|||||||| ||| |||||| | ||||| |||||||||||| | || || |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6244727 |
tcttaaagcgtttatcaccatagccttgtgcttctaccatcagactccgtactcctttaatgttatgaatctgctttagttttctatcaccatcttccaa |
6244826 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgatgtc |
407 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6244827 |
atcaaggcagcaccaaatgtgacgtgtcctttgagggatatcttgcactttcacaccctctattcgtaagcagaattctcctgacattgatgtc |
6244920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 15 - 407
Target Start/End: Complemental strand, 13271349 - 13270955
Alignment:
| Q |
15 |
tcagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtt |
114 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13271349 |
tcagcaagagcgtatgcaaattatacaacatacaaatggaatcaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagtt |
13271250 |
T |
|
| Q |
115 |
tcctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatatt-tagtcttgaaaacaaactctgatgcacgttggtggat |
213 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||| ||||| | | ||||| ||||||||| |
|
|
| T |
13271249 |
tcttatctcatcagctagctctgagagattgcaacctttgaaagataacatccgtaaatattgtagtcttgaatacaaattatactgcacattggtggat |
13271150 |
T |
|
| Q |
214 |
atcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttcca |
312 |
Q |
| |
|
||||||||| ||| |||||| | ||||| |||||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13271149 |
atcttaaagcgtttatcaccatagccttgtgcttctaccatcagactccgtagtcctttaatgttatgaatctgctttagttttctatcaccatcttcca |
13271050 |
T |
|
| Q |
313 |
aatcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgatgtc |
407 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |
|
|
| T |
13271049 |
aatcaaggcagcaccaaatgtgacgtgtcctttgagggatatattgcactttcacaccctctattcgtaagcagaattcccctgacattgatgtc |
13270955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 385
Target Start/End: Original strand, 6141520 - 6141891
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
6141520 |
cagtaagagggtatgcaaattatacagcttacaaatggaattaggtaagcttgtaatctccgtgtaagaaaggtctagatagcgcagaagctttaaattt |
6141619 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||| |||||||| | | ||||| | |||| || |
|
|
| T |
6141620 |
cttatctcatcagctagctctaagagattgcaaccattgaaagacaacatccgcaaatattttagtctaaaaaacaaattaagctgcacatcggtgctta |
6141719 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
|||||||| || |||||| | ||||| |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6141720 |
tcttaaagcgttggtcaccatagccttgtgcttctaccatcagactctgtagtcctttaatgttatgaatatgctttagttttctatcaccatcttccaa |
6141819 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcg |
385 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| | |||||||||||| || |||| || ||||||||||| |
|
|
| T |
6141820 |
atcaaggcaacaccaaatgtgacgtgtcctttcattgatatcttgcacgttatcaccttcgattcgtaagcg |
6141891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 16 - 383
Target Start/End: Original strand, 6168125 - 6168494
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||| |
|
|
| T |
6168125 |
cagtaagagcgtatgcaaattatacagcatacaaatggaattaggtaagcttgtaatgtcggtgtaagaaaggtctagatatcgtagaagctttaaattt |
6168224 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||| | |||||||||| | |||||||| |||||||| |||||||| | | || || | |||| || |
|
|
| T |
6168225 |
cttatctcatcagctagctctaagagattgcaaccattgaaagacaaccttcgcaaatattttagtctaaaaaacaaattaagctgaacatcggtgctta |
6168324 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
||| |||| | |||||| | ||||| |||||||||||| | ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||| |
|
|
| T |
6168325 |
tctgaaagcgctggtcaccatagccttgtgcttctaccatcagactctgtagtcctttaatgtcacgaatctgctttagttttctatcaccatcttccaa |
6168424 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaag |
383 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
6168425 |
atcaaggcagcaccaaatgtgacgtgtcctttgagggatatcttgcacgttatcaccctctattcgtaag |
6168494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 16 - 395
Target Start/End: Original strand, 6899322 - 6899703
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
||||||||| || ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
6899322 |
cagtaagagtgtctgcaaattatacagcatacaaatggaatcaggtaagcttgcaatctcggtgtaagaaaggtctagatagcgcagaagctttaaattt |
6899421 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||| | || ||||| |||||| || |
|
|
| T |
6899422 |
cttatctcatcagctagctctatgagattgcaaccagagaaagacaacacccgcaaatattttactcttgaaaacaaattatgctgcacattggtgctta |
6899521 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
|| |||| || | ||| | ||||| |||||||||||| | | | |||||| ||||| ||| |||| |||| |||||||||||||||||||||||| |
|
|
| T |
6899522 |
tcctaaaacgttggttgccatagccttgtgcttctaccatcagactgtgtagtcccttaattttaagaatatgctctagttttctatcaccatcttccaa |
6899621 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcct |
395 |
Q |
| |
|
|||||||||||||||||| || | ||||||| |||||||||||||| || |||||||||||| |||||||||||||||| |
|
|
| T |
6899622 |
atcaaggcagcaccaaatctggcgcgtcctttcagggatatcttgcaggttatcaccctctattcttaagcgaaattctcct |
6899703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 29 - 404
Target Start/End: Complemental strand, 6592135 - 6591758
Alignment:
| Q |
29 |
tgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcag |
128 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||| |||||| || | |||||||||||||||||||| ||||||||| |||| |||||| ||| |
|
|
| T |
6592135 |
tgcaaattatacagcgtacaaatggaattaggtaagcttgcaatctcagttttagaaaggtctagatagcgcagaagctttaaatttcttatctcatcat |
6592036 |
T |
|
| Q |
129 |
ctagctctgagagattgcaacaagagaaagacaacatccgcaaatattt-agtcttgaaaacaaactctgatgcacgttggtggatatcttaaagtattt |
227 |
Q |
| |
|
|||||| | ||||||||||| ||| | |||||||||||||||||||| | ||||||||||||| | || ||||| ||||| |||||||||| ||| |
|
|
| T |
6592035 |
ctagctttacgagattgcaaccagaaagggacaacatccgcaaatattttattcttgaaaacaaattatgctgcacactggtgcttatcttaaagcgttt |
6591936 |
T |
|
| Q |
228 |
ctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaatcaaggcagcac |
326 |
Q |
| |
|
|||||| | ||||| |||||||||||| | | | |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6591935 |
ttcaccatagccttgtgcttctaccatcagactgtgtagtcctttaattttatgaatctgcttcagttttctatcaccatcttccaaatcaaggcagcac |
6591836 |
T |
|
| Q |
327 |
caaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcctaacattgat |
404 |
Q |
| |
|
||||| |||| |||||| | ||||||||||||||| || ||||||||||| ||||| ||||||||| ||| |||| |
|
|
| T |
6591835 |
caaatatgacgtgtcctattagggatatcttgcacgttgccaccctctatttctaagcagaattctcctgacactgat |
6591758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 19 - 394
Target Start/End: Original strand, 6916338 - 6916715
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || || |||||||| | |||||||| |||| | ||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| |||| | |
|
|
| T |
6916338 |
taagagtgtctgtaaattatatatcatacaaacggaaatcggtaagcttgtaatctcagtgtacgaaagatctagatagcgcagaagctttaaatttctt |
6916437 |
T |
|
| Q |
119 |
atctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatatt-tagtcttgaaaacaaactctgatgcacgttggtggatatct |
217 |
Q |
| |
|
||||| || |||||||| |||||| |||||| | |||||| |||||||||||||||| |||||||||| ||||| | | ||||| | | || ||||| |
|
|
| T |
6916438 |
atctcatctgctagctccgagagactgcaaccatggaaagataacatccgcaaatattgtagtcttgaatacaaattacgttgcacatcgatgcctatct |
6916537 |
T |
|
| Q |
218 |
taaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaatc |
316 |
Q |
| |
|
|| || ||| |||||| | ||||| |||||||||||| | | | |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6916538 |
tatagcgtttgtcaccatagccttgtgcttctaccatcagactgtgtagtcctttaattttatgaatctgctttagttttctatcaccatcttccaaatc |
6916637 |
T |
|
| Q |
317 |
aaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcc |
394 |
Q |
| |
|
||||||||||||||| |||| |||||||| ||||||||||||||| || ||| ||||||||| ||||| |||||||| |
|
|
| T |
6916638 |
aaggcagcaccaaatatgacgtgtccttttagggatatcttgcacgttttcactctctattcggaagcggaattctcc |
6916715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 6264919 - 6265286
Alignment:
| Q |
16 |
cagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagttt |
115 |
Q |
| |
|
||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
6264919 |
cagtaagagggtatgcaaactatacagcttacaaatggaattaggtaagcttgtaatctctgtgtaagaaaggtctagatagcgcagaagctttaaattt |
6265018 |
T |
|
| Q |
116 |
cctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggata |
214 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||| |||||||| | | ||||| | |||| || |
|
|
| T |
6265019 |
cttatctcatcagctagctctaagagattgcaacccgagaaagacaacattcgcaaatattttagtcttaaaaacaaattaagctgcacatcggtgcgta |
6265118 |
T |
|
| Q |
215 |
tcttaaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaa |
313 |
Q |
| |
|
||||||| || |||||| | ||||| |||||||||||| | | | |||||| || || || | || | || |||||||||||||||||||||||| |
|
|
| T |
6265119 |
ccttaaagcgttggtcaccatagccttgtgcttctaccatcagactgtgtagtcccttgatttttttaacattctctagttttctatcaccatcttccaa |
6265218 |
T |
|
| Q |
314 |
atcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgta |
381 |
Q |
| |
|
||||||||||||||| | ||||| |||||||| ||| ||||||| || || ||||||||||||||| |
|
|
| T |
6265219 |
atcaaggcagcaccatacgtgacgtgtccttttaggtatatctttcatgttatcaccctctattcgta |
6265286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 394
Target Start/End: Original strand, 7749240 - 7749616
Alignment:
| Q |
20 |
aagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttccta |
119 |
Q |
| |
|
||||| || ||||||||||||| ||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
7749240 |
aagagtgtctgcaaattatacagcatacaaatggaattgggtaagcttgcaatctcagtgtgagaaaggtctagatagcgcagaagctttaaatttctta |
7749339 |
T |
|
| Q |
120 |
tctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggatatctt |
218 |
Q |
| |
|
|||| || ||||||||| ||||||||||| ||||| ||||||| | ||||||| |||||||||||||||||| | | || || ||| | |||||| |
|
|
| T |
7749340 |
tctcatcggctagctctacgagattgcaaccagagagggacaacacctgcaaatattttagtcttgaaaacaaaattttctgtacactggggcttatctt |
7749439 |
T |
|
| Q |
219 |
aaagtatttctcacca-acacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaatca |
317 |
Q |
| |
|
|||| || |||||| | | || |||||||||||| | | | ||||| ||||| |||||||| || | |||||||||||||||||||||||||||| |
|
|
| T |
7749440 |
aaagcgttggtcaccacaaccctgcgcttctaccatcagactgtgcagtcccttaattttatgaatatgatctagttttctatcaccatcttccaaatca |
7749539 |
T |
|
| Q |
318 |
aggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaattctcc |
394 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||| |||||||| || || ||||||||| ||||| |||||||| |
|
|
| T |
7749540 |
aggcagcaccaaatgtgacgcgtccttttagggatttcttgcacattaccatcctctattcttaagcagaattctcc |
7749616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 361
Target Start/End: Complemental strand, 6722871 - 6722527
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || ||||||||||| | ||||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||| ||||||||| || | | |
|
|
| T |
6722871 |
taagagtgtctgcaaattatatagcatacaaatggaattaggtaagcttacaatgtcagtgtaggaaaggtctagatagcgcaaaagctttaaattcctt |
6722772 |
T |
|
| Q |
119 |
atctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcacgttggtggatatct |
217 |
Q |
| |
|
||||| || | ||||||| |||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||| | || ||||| |||||| ||||| |
|
|
| T |
6722771 |
atctcatcggatagctctaagaggttgcaaccagagaaagacagcatccgcaaatattttagtcttgaaaacaaattatgctgcacattggtgcttatct |
6722672 |
T |
|
| Q |
218 |
taaagtatttctcacc-aacacttgttcttctaccatcaaattctttagtcctttaatgttatgaatttgctttagttttctatcaccatcttccaaatc |
316 |
Q |
| |
|
||||| || ||||| | | ||| |||||||||||| | | |||||| ||| || ||||| |||| ||||||||| |||||||| | |||||| |
|
|
| T |
6722671 |
taaagcgttggtcaccgtagccctgtgcttctaccatcagactgcgtagtccagtaactttgtgaatatgctctagttttctgtcaccatccttcaaatc |
6722572 |
T |
|
| Q |
317 |
aaggcagcaccaaatgtgacatgtcctttgagggatatcttgcac |
361 |
Q |
| |
|
||||||||||||||||| || |||||||| | |||||||||||| |
|
|
| T |
6722571 |
aaggcagcaccaaatgttacgtgtcctttctgagatatcttgcac |
6722527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 6237989 - 6238151
Alignment:
| Q |
18 |
gtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| || ||||||||| |||| |
|
|
| T |
6237989 |
gtaagagcgtatgcaaattatacaacatgcaaatggaattaggtaagcttgtaatttcagtgtaagaaaggtctagatagcacaaaagctttaaatttct |
6238088 |
T |
|
| Q |
118 |
tatc---tcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatattt |
177 |
Q |
| |
|
|||| || |||||||||||| | |||||| ||| ||||| ||||||||||||||||||||| |
|
|
| T |
6238089 |
tatcagatcatcagctagctctaaaagattggaaccagagatagacaacatccgcaaatattt |
6238151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 6881753 - 6881927
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || || ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||| ||||||||| |||| | |
|
|
| T |
6881753 |
taagagtgtctgtaaattatacaacatacaaatggaattaggtaagcttgcaatctcagtgtgcgaaaggtccagatagcgcagaagctttaaatttctt |
6881852 |
T |
|
| Q |
119 |
atctcttcagctagctctgagagattgcaacaagagaaagacaacatccgc-aaatatttagtcttgaaaacaaa |
192 |
Q |
| |
|
||| | ||| ||||| | |||| ||||||| |||||| |||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
6881853 |
atcccatcatctagcagtaagaggttgcaaccagagaaggacaacatccgcaaaagttttactcttgaaaacaaa |
6881927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 5279887 - 5280012
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || |||||||||||||||| ||||||||||| ||||| ||||||||| | |||||||||||||||||||| | || |||||||||||| | | |
|
|
| T |
5279887 |
taagagtgtctgcaaattatacaacacacaaatggaatcaggtaggcttgtaattccagtgtaagaaaggtctagataacacagaagctttaagttgctt |
5279986 |
T |
|
| Q |
119 |
atctcttcagctagctctgagagatt |
144 |
Q |
| |
|
||||| ||||||||||| |||||||| |
|
|
| T |
5279987 |
atctcgtcagctagctcggagagatt |
5280012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 5263011 - 5263135
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || |||||||||||||||| | ||||||||| ||||| |||||||||| | |||||||||||||||||||| |||| |||| ||||||| | |
|
|
| T |
5263011 |
taagagtgtctgcaaattatacaacacataaatggaatcaggtaggcttgtaatcccagtgtaagaaaggtctagataacgcagaagc-ttaagttgctg |
5263109 |
T |
|
| Q |
119 |
atctcttcagctagctctgagagatt |
144 |
Q |
| |
|
||||| ||||||||||| |||||||| |
|
|
| T |
5263110 |
atctcgtcagctagctcggagagatt |
5263135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 6946502 - 6946625
Alignment:
| Q |
19 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
118 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| |||| ||||| |||||||| | |||| ||||||||||||||| |||| ||||||||| || | | |
|
|
| T |
6946502 |
taagagtgtttgcaaattatacaacatacaaatagaatcgggtaaccttgtaatattagtgtgagaaaggtctagataacgcaaaagctttaaattgctt |
6946601 |
T |
|
| Q |
119 |
atctcttcagctagctctgagaga |
142 |
Q |
| |
|
||||| ||| |||||||||||||| |
|
|
| T |
6946602 |
atctcatcaactagctctgagaga |
6946625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 8588978 - 8589088
Alignment:
| Q |
32 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagcta |
131 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||| ||| ||||| || | |||||| | | ||| |
|
|
| T |
8588978 |
aaattatacaacatacaaatggtatcaggtaagcttgtaatcaaagtgtaagaaaggtctagataacgcaaaagttttaaattgcttatctcattaacta |
8589077 |
T |
|
| Q |
132 |
gctctgagaga |
142 |
Q |
| |
|
||||||||||| |
|
|
| T |
8589078 |
gctctgagaga |
8589088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 6480777 - 6480664
Alignment:
| Q |
29 |
tgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcag |
128 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||||| |||||||||| ||| |||| || | |||||| ||| |
|
|
| T |
6480777 |
tgcaaattatacaacatacaaatgctatcaggtaagcttgtaatctcagtgaaagaaaggtcaagatagcgcaaaagttttatattgcttatctcatcaa |
6480678 |
T |
|
| Q |
129 |
ctagctctgagaga |
142 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
6480677 |
ctagctcagagaga |
6480664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 6735200 - 6735317
Alignment:
| Q |
32 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagcta |
131 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| |||||| ||||| |||||||||||||| |||| ||| ||||| || | |||||| || | | |
|
|
| T |
6735200 |
aaattatacaacatacaaatggtatcaggtaagcttctaatcttagtgtatgaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaa |
6735299 |
T |
|
| Q |
132 |
gctctgagagattgcaac |
149 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
6735300 |
gctctgagagatagcaac |
6735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 6555269 - 6555146
Alignment:
| Q |
20 |
aagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttccta |
119 |
Q |
| |
|
||||| || ||||||||||||||||||||||||| || |||||||||| |||| | ||||| | |||||||||||| |||| ||| |||| ||||||| |
|
|
| T |
6555269 |
aagagtgtttgcaaattatacaacatacaaatggtatcaggtaagcttttaataccagtgtatgtaaggtctagataacgcaaaagttttagctttccta |
6555170 |
T |
|
| Q |
120 |
tctcttcagctagctctgagagat |
143 |
Q |
| |
|
|||| || | ||||||||||||| |
|
|
| T |
6555169 |
tctcatccacaagctctgagagat |
6555146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 6850245 - 6850302
Alignment:
| Q |
54 |
aattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaa |
111 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6850245 |
aattaggtatgcttgtaatctcagtgtaagaaaggtctagatagcgcagaagctttaa |
6850302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 6520951 - 6520841
Alignment:
| Q |
32 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagcta |
131 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||||| |||| ||| ||||| || | |||||| || | | |
|
|
| T |
6520951 |
aaattatacagcatacaaatggtatcaggtaagcttgcaatcttattgtaagaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaa |
6520852 |
T |
|
| Q |
132 |
gctctgagaga |
142 |
Q |
| |
|
||||||||||| |
|
|
| T |
6520851 |
gctctgagaga |
6520841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 6882026 - 6882070
Alignment:
| Q |
290 |
tagttttctatcaccatcttccaaatcaaggcagcaccaaatgtg |
334 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6882026 |
tagttttctatcaccatcttcaaaatcaaggcagcaccaaatgtg |
6882070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 8453885 - 8454058
Alignment:
| Q |
20 |
aagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttccta |
119 |
Q |
| |
|
||||| || |||||||||| |||||||||||||| || |||||| || |||| |||||||| ||||||||||| |||| ||| ||||| || | || |
|
|
| T |
8453885 |
aagagtgtttgcaaattatgcaacatacaaatggtatcaggtaatatttcaatccatgtgtaagagaggtctagataacgcaaaagttttaaattgctta |
8453984 |
T |
|
| Q |
120 |
tctcttcagctagctctgagagattgcaacaagagaaagacaacatccgc-aaatatttagtcttgaaaacaaa |
192 |
Q |
| |
|
|||| ||| |||| ||| ||||| ||||| || || ||||||||| ||| ||||||||||||||||||| |
|
|
| T |
8453985 |
tctcatcaactagttctaagagaccgcaacctctaaatgataacatccgcaaaaaatttagtcttgaaaacaaa |
8454058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 6449598 - 6449546
Alignment:
| Q |
20 |
aagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaat |
72 |
Q |
| |
|
||||| || |||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
6449598 |
aagagtgtttgcaaattatacaacacacaaatggtatcaggtaagcttgtaat |
6449546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 5297970 - 5298073
Alignment:
| Q |
31 |
caaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagct |
130 |
Q |
| |
|
||||||||||||| | || ||||||| |||||||||||| | | |||| |||||| || ||||| |||| |||||||||||| | |||||| || ||| |
|
|
| T |
5297970 |
caaattatacaacgtgcagatggaatcaggtaagcttgttagcccggttcgagaaagatcaagataacgcagaagctttaagttgcttatctcatcggct |
5298069 |
T |
|
| Q |
131 |
agct |
134 |
Q |
| |
|
|||| |
|
|
| T |
5298070 |
agct |
5298073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 8569749 - 8569670
Alignment:
| Q |
32 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaa |
111 |
Q |
| |
|
|||||||||||| |||||||||||| ||| || ||| ||||||| ||| || || ||||||||||||| ||||||||| |
|
|
| T |
8569749 |
aaattatacaacttacaaatggaatcaggcaaccttttaatctctgtgcgagtcagatctagatagcgcaaaagctttaa |
8569670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 5298236 - 5298297
Alignment:
| Q |
298 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgc |
359 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
5298236 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgc |
5298297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 6527682 - 6527618
Alignment:
| Q |
79 |
gtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagat |
143 |
Q |
| |
|
||||||||||||||| || |||| ||| |||||||||| |||||| || | ||||||||||||| |
|
|
| T |
6527682 |
gtaagaaaggtctaggtaacgcaaaagttttaagtttcttatctcatccacaagctctgagagat |
6527618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 8296 - 8179
Alignment:
| Q |
32 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagcta |
131 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| |||||| ||||| |||||||||||||| |||| ||| ||||| || | |||||| || | | |
|
|
| T |
8296 |
aaattatacaacatacaaatggtatcaggtaagcttctaatcttagtgtatgaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaa |
8197 |
T |
|
| Q |
132 |
gctctgagagattgcaac |
149 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
8196 |
gctctgagagatagcaac |
8179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 13353 - 13410
Alignment:
| Q |
54 |
aattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaa |
111 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13353 |
aattaggtatgcttgtaatctcagtgtaagaaaggtctagatagcgcagaagctttaa |
13410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 6573828 - 6573733
Alignment:
| Q |
295 |
ttctatcaccatcttccaaatcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgcactttcacaccctctattcgtaagcgaaatt |
390 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||| |||| |||||||| || ||||||||||| | ||||||| ||| |||||| ||||| |
|
|
| T |
6573828 |
ttctagcaccatcttccaaaccaagggagcaccaaatatgacgtgtcctttcagatatatcttgcaccctatcaccctcaatttgtaagcaaaatt |
6573733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 6574060 - 6573969
Alignment:
| Q |
86 |
aggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatattt |
177 |
Q |
| |
|
|||||||||||||||| ||||||||| || ||||||| || |||| ||||| ||| | |||| | |||| |||||||||||||||||||| |
|
|
| T |
6574060 |
aggtctagatagcgcaaaagctttaaattgactatctcatctgctaactctgtgagttcacaaccatagaatgacaacatccgcaaatattt |
6573969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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