View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9557_low_61 (Length: 343)
Name: NF9557_low_61
Description: NF9557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9557_low_61 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 329
Target Start/End: Original strand, 49044041 - 49044365
Alignment:
| Q |
11 |
agtttggtgttggatggtagaattagatattatttgacttctctgactaaacttaaaatgtaatcggatcatatatatattggttggtggaaaattcatt |
110 |
Q |
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| T |
49044041 |
agtttggtgatggatggtagaattagatattatttgacttctctgactaaacttaaaatgcaatcggatcatatatatattggttggtggaaaattcatt |
49044140 |
T |
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| Q |
111 |
aggccaacaaattcaaatttcataacctagttttgcaaacccattcgtcattcaacccaattaacactgtaaactatttttaagatgc-----aagttaa |
205 |
Q |
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| T |
49044141 |
aggccaacaaattcaaatttcataacctagttttacaaacccattcgtcattcaacccaattaacactgtaaactatttttaagatgcaagttaagttaa |
49044240 |
T |
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| Q |
206 |
gttaaggtttgtaattgaaatttgctcaaacatcctgactagaaatttggaaattacc-aatccttaagacattataatatcttgctttaaatccatttc |
304 |
Q |
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| T |
49044241 |
gttaaggtttgtaattgaaatttgctcaaacatcctgactagaaatttggaaattaccaaatccttaagacattataatatcttgctttaaatccatttc |
49044340 |
T |
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| Q |
305 |
gtggctaccctaacaacacgtgaat |
329 |
Q |
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| T |
49044341 |
gtggctaccctaacaacacgtgaat |
49044365 |
T |
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